ID:

dsi_18300

 Coordinate:

3l:3023737-3023886 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.3 -18.3 -17.9 -17.9

Flybase annnotation

Antisense to intron [3l_3023935_3023996_-]; five_prime_UTR [3l_3023374_3023736_+]; exon [3l_3023374_3023736_+]; intron [3l_3023737_3025888_+]; Antisense to five_prime_UTR [3l_3023611_3023934_-]; Antisense to exon [3l_3023611_3023934_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGTGCGACTACGTCATCTGTGGCATCTGAATCGGCCGAAAACATCTGGCGGTGCGAAAGATAGTGTGCGGAATACACATCATTCAAAGCAACTTCATCATCGTCACGATCGTTATTGAATGGAGGGCTGGGTTTACGAAAAGCGATTTTAAAAGGGCGTACCCAAGGTCGTCCAAACTCGAATCCAGTTCTATCCACAAACAGTGCTTAGATTCCATGGTAATTGTGCGCAATTTCACCACAATTTACCT
********************************************************************************************............................((.....(((((((...................(((((.(((...)))))))))))))))...))***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR902009
testis
 M024
male body		 SRR553488
RT_0-2 hours eggs
 M025
embryo
 O002
Head
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
......................................................................................................................ATGGAGGACTGGGTTTACGT................................................................................................................ 20 2 1 3.00 3 3 0 0 0 0 0 0 0 0
......................................................................................................................ATGGAGGACTGGGTTTACGTT............................................................................................................... 21 3 1 3.00 3 3 0 0 0 0 0 0 0 0
.....................................................................................................................GATGGAGGACTGGGTTTACGT................................................................................................................ 21 3 1 3.00 3 3 0 0 0 0 0 0 0 0
............................................................................................TTCATCATCGTCACGATCG........................................................................................................................................... 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0
.................................................................................................................ATTGAATGGAGGGCTGGGTTTACAA................................................................................................................ 25 1 1 2.00 2 0 0 2 0 0 0 0 0 0
.......................................................................................................................TGGAGGACTGGGTTTACGTT............................................................................................................... 20 3 5 1.60 8 8 0 0 0 0 0 0 0 0
......................................................................................................TCACGATCGTTATTTAATGGAT.............................................................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
..........CGTCATCTGTGGCATCTG.............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........................TCTGAATCGGCCGAAAACATC............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.............CATCTGTGGCATCTGAATCGG........................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............TCATCTGTGGCATCTGAATCG......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................CTTCATCATCGTCACGATCGT.......................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................................................TGATGGAGGACTGGGTTTACG................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................TGGAGGACTGGGTTTACGT................................................................................................................ 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TCGAATCCAGTCCTTTCCACCA................................................... 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0
...GCGACTACGTCATCTGTGGCATCTGA............................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.GTGCGACTACGTCATCTGTGGCATCTG.............................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................AGGTCGTCCAAACTCGAATCC................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.....................................................................................................................GATGGAGGACTGGGTTTACG................................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................ATGGAGGACTGGGTTT.................................................................................................................... 16 1 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................................................................CTTCATCATCGTCACGATCGG.......................................................................................................................................... 21 1 2 0.50 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................GATGGAGGACTGGGTTTA................................................................................................................... 18 2 5 0.40 2 2 0 0 0 0 0 0 0 0
..................................................................................................................TTGAATGGAAGGCTGGATT..................................................................................................................... 19 2 3 0.33 1 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................TCGAATCCAGTTCCCTCCACCA................................................... 22 3 4 0.25 1 0 0 0 0 1 0 0 0 0
...................................................................................................................................TTCACGAAAAGAGACTTTAAA.................................................................................................. 21 3 8 0.13 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................GCGTATCGAAGGTCGTC.............................................................................. 17 2 9 0.11 1 0 0 0 0 0 0 0 0 1
.................TGCGGTATCTGAAGCGGCC...................................................................................................................................................................................................................... 19 3 9 0.11 1 0 0 1 0 0 0 0 0 0
.....................GCCTCTGAGACGGCCGAAA.................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1
.....................................................................................................................GATGGAGGACTGGGTTT.................................................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

########################################################################################################################################################################################################################################################--
CCACGCTGATGCAGTAGACACCGTAGACTTAGCCGGCTTTTGTAGACCGCCACGCTTTCTATCACACGCCTTATGTGTAGTAAGTTTCGTTGAAGTAGTAGCAGTGCTAGCAATAACTTACCTCCCGACCCAAATGCTTTTCGCTAAAATTTTCCCGCATGGGTTCCAGCAGGTTTGAGCTTAGGTCAAGATAGGTGTTTGTCACGAATCTAAGGTACCATTAACACGCGTTAAAGTGGTGTTAAATGGA
*****************************************************************............................((.....(((((((...................(((((.(((...)))))))))))))))...))******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 M053
female body
 O001
Testis
 O002
Head
 SRR618934
dsim w501 ovaries
..................................................................................................TAGCAGTGCTAGCAATAACTT................................................................................................................................... 21 0 1 2.00 2 1 1 0 0 0 0 0 0
................................................................................TCAGTTTCGTTGAAGCAGT....................................................................................................................................................... 19 2 1 1.00 1 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................GGTCAAGATAGGTGTTTGT................................................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0
..................................................................CGCCTTATGTGTAGTAAG...................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0
......................................................................................................................................................................CAGCAGGTTTGAGCTTAGGTC............................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................TGTAGACCGCCACGCTTTCTA............................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0
..................................................................................AGTTTCGTTGAAGTAGTAGCAGTGC............................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0
............................................................................................GAGTAGTAGCAGTGCTAGCAA......................................................................................................................................... 21 1 2 0.50 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................AAAGGTGTTTGTCACG............................................ 16 1 3 0.33 1 0 0 0 0 0 0 0 1
............................................................................................AAGAAGTAGCAGTGC............................................................................................................................................... 15 1 8 0.13 1 0 0 1 0 0 0 0 0
.CAAGGTGATGCAGTGGACA...................................................................................................................................................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 0 1
..................................................................................................TAGAAGTGCTAGCAA......................................................................................................................................... 15 1 9 0.11 1 0 0 0 0 0 0 0 1
............................................................................................................................................TCGCAAAAATTTTATCGCAT.......................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:3023687-3023936 + dsi_18300 GGTGCGACTACGTCATCTGTGGCATCTG------AATCGGCC-GAAAACATCTGGCGGTGCGAAAGATAGTGTG----------------------------------------------------------CGGAATA---------CAC---ATCATTCAAAG--CAACTT----CATCATCGTCACGATCGTTAT--TGAATGG-----AGGG--CTGGGTT------------T-----------------AC-GAAAAGCGA----TTTTAAAAGG----------------------------------------------GCGTACCCAAGGTCGTCCAAACTCG-AATCCAGTTCTATCCACA---AAC---------AGTGCTTAGATTCCATGGTAATTGTGCGCAATTTCACCACAATTTACCT
droSec2 scaffold_2:3159141-3159390 + GGTGCGACTACGTCATCTGTGGCATCTG------AATCGGCC-GAAAACATCTGGCGGTGCGAAAGATAGTGTG----------------------------------------------------------CGGAATA---------CAT---ATCATTCAAAG--CAACTT----CATCATCGTCACGATCGTTAT--TGAATGG-----AGGG--CTGGGTT------------T-----------------AC-AAAAAGCGG----TTTTAAAAGG----------------------------------------------GCGTACCCAAGGTTATTCCAACTCG-AATCCAGTTCTATCCACA---AAC---------AGTGCTTAGATTCCATGGTAATTGTGCGCAATTTCGCCACAATTTACCT
dm3 chr3L:3165654-3165903 + GGCGCGACTACGTCATCTGTGACATCTG------AATCGGTC-GAAAACATCTGGCGGTGCGAAAGATAGTGTG----------------------------------------------------------CGGAATA---------CAC---ATCATCCAAAG--CAACTT----CATCATCATCACGATCGTTAT--TGAATGG-----AGGG--CTGGGTT------------T-----------------AC-AAAAAGCGA----TCTTAAAAGG----------------------------------------------GCGTACCCAAGGTCGTCCAAACTCG-AATCCAGTTCTATCCACA---AAC---------AGTGCTTAGATTCCATAGTAATTGTGCGCAATTTCACCACAATTTACCT
droEre2 scaffold_4784:3174541-3174806 + GGCGCGACTACGTCATCTGTGGCATCTG------ATTCGGCC-GAAAACATCTGGCAGTGCGAAAGATATTGTG----------------------------------------------------------TAGAATA---------CAC---ATCATCCAAAG--CAACTT----CATCATCATCATGATCATCAG--TGAATGG-----CGGG--CTGGGTT------------TTCAATTCGGTTCCGTT-CC-AAAAAGCGA----TCTTAAAAGG----------------------------------------------GCGTCTCCAAGGTCGTCCAAACTCA-AATCCAGTTCTATCTACA---AAG---------AGTGTTTACATTCCATGGTAATTGTGCGCAATTTCACCACAATTTACCT
droYak3 3L:8776108-8776372 - GGCGCGACTACGTCATCAGTGGCATCGGAATCGGAATCGGCC-GAAAACATCTGGCGGTGCGAAAGATAGTGTG----------------------------------------------------------CGGAATA---------CAC---ATCATCCAAAG--CAGCTT----CATCATCATCACGATCATTAG--TG------------GA--CTGGGTT------------TTAAGTTCGGTTCCGTT-CC-AAAAAGCGA----TCTTAAAAGG----------------------------------------------GCGTCCCCAAGGTCGCCCAAACTCA-AATCCAGTTCTATCCACA---AAA---------AGTGCTTATATTCCACTGTAATTGTGCGCAATTTCACCACTATTTAACT
droEug1 scf7180000409466:889338-889587 + GGCGCGACTACGTCATCTGTGGCAT------------CGGCC-AAAAACATCTGGCGATGCGAAAGATAATGTG----------------------------------------------------------CGGAATA---------CAC---ATCGCTTAAAA--CAACAT----CATCATCAT---------------------AAGGGAGGG--C-----TTTAATTTTGTTTTTAGTTTCGGTTCCGTT-AG-AAAAAGTGG----TTTTAAAAGG----------------------------------------------GCGTTTACAAGGTCGCTCGGACTTA-ATTCCAGTTCTATTCACATTTAAC---------ACTGTTCACA----AAAGCAATTTTTCGCCATTTT--TGCTATTTACCT
droBia1 scf7180000302428:2513460-2513719 + GGCGCGACTACGTCATCTGCGACAT------------CGGCC-AAAAACATCTGGCGGTGCGAAAGATAGTGTG----------------------------------------------------------CGGAACA---------CAC---ATCTTCCAAAA--C--CCACAT-CATCGTCAT---CACCATTCCAC-------AGGGGAGG-------GTTTTAATG------TCGCTTTCGGTTCCGTT-CTGAAAACGCGG----TCTCAAAAGG----------------------------------------------GCGTCCACAAGGTCGCTCCAACTCG-AATCCAGTTCTATTCACG---AAT---------ACTCTGTATAATCCGTGGTAATCGTGCGCAATTTCACTGCCATTTACCT
droTak1 scf7180000415378:235924-236139 - GGCGCGACTACGTCATCGGTGGCAT------------CGGTT-AAAAACATCTGGCGGTGCGAAAGAT-------------------------------------------------------------------------------------------CCAAAA--C--CTACAT-CATCATTTTC-----------GA-------AGGGGA-------GGGTTTTAAT------------TTC--------T-GA-AAAAAACGC----TCTTAAAAGG----------------------------------------------GCGTCCACAAGGTCGCTCGCACTCA-AATCCAGTTCTATTCACA---AAC---------ACTCCTCACAATTCAAAGTAATTGTGCGCAATTTCGCAACAATTTACCT
droEle1 scf7180000491249:2120920-2121146 - GGCGCGACTACGTCATCGTT----TTTG---------------AAAAACATCTGGCGGTGCAAAAGATAATGTG----------------------------------------------------------CGGAATAGGCAC----CA--TCATCATCCAAAA--CAATAT----CATCATTATC------GTT---------------G-------TGGGTT------------T-----TCAGTTCCATT-TCAAAAAAGCGG----TCCTAAAAGG----------------------------------------------GCATCTCCAA-GTCGCTCGATCCCAAAATCCAGTTCTATTCACA---AAC---------ACCCTCTATAATTCGAAGTAATTGTGCGCAATTTC----------CCCT
droRho1 scf7180000777063:93094-93307 - GGCGCGACTACGTCATTGCTA----------------------AAAAACATCTGGCGTTGCGAGAGATAATGTT----------------------------------------------------------CAAAATA---------CACATCATCATACAAAA--CAACAT----CATCATT------------------------GGGGA-------GGGTT------------T-----TCAATTCCATT-CCAAAGAAGCGG----TCTTAAAAGG----------------------------------------------GCATCTCGAAGGTCGCTCGAACCCAAAAGCCAGTTCTATTCACA---AAC---------ACTCT----AATTCGAAGTAATTGTGTGCAG-----------TTTACCT
droFic1 scf7180000454105:1479538-1479796 + GGCGCGACTACGTCATCTGTGGCAT------------CGGCC-AAAAACATCTGGCGGTGCGAAAGATAATGTG----------------------------------------------------------CTTGGTACTC-CTATTCAC---ATCATACGAAA--CAACAT----CATCATCGC---GAGA--------------GAGGGAGG-------GTTTCATTT------TCGAATTCGGTTCCGTT-CC-AAAAAGCGG----TCTTAAAAGG----------------------------------------------GCGTCGTCAAGGTCGCCCAAAACCAAAATCCAGTTCTAATCATG---AAC---------TCCCTTTGAAATTTG-GGTAATTGCGAGCAATTTCACTCAAATGTATCT
droKik1 scf7180000302577:1348430-1348614 + GGCGCGACTACGTCATCTGTGGCAT------------CGGCCAAAAAACATCTGGT---GTG-AAGATTATT-A---------------------------------CACACACAAGCACACAGAGCACACGCGATGTA---------CAC---ATCATTGGAAA--CATCAT----CATCACCGTTATGAGAGATGT--CG---GG-----CA-------------------------------GGTTCTGTTTCC-AGAAAGCAG----T-TCAAAGGG----------------------------------------------GCGGCTCCAAGGTCGCACA-----------------------------------------------------------------------------------------
droAna3 scaffold_13337:8950928-8951145 - GGCGCGACTACGTCATCTGTAGCAT------------CAATT-CAAAACATCTGGT---GTG-AAGATAATGTG----------------------------------------------------------CGCGA-----------------ACTATCAAAGG--CTATCAACT-CATGGAGCT---------------------GAGGGAGGGCACTGGGG-----------------------------------TGAGGCCG----TTTCAAAAGGCACTCGCCCAAGGCCGCCCAACCTCAACCAGATAGTTGTTGCTTCC-------------------------------AG---------TA---ATT---------GCTTTCTGGTGGCTACTT----------CAATTATGCTCTACTCCCTCT
droBip1 scf7180000395148:63218-63428 - GGCGCGACTACGTCATCTGTAGCAT------------CAATT-CAAAACATCTGGT---GTG-AAGATAATGTG----------------------------------------------------------CGCGA-----------------ACTATC-AAAACGAAACCACAT-CATGGAGCT---------------------GAGGGGGGAACCTGGGGT------------T-----------------------AGGCCG----TTTCAAAAGGCACCCGCCCAAGGCCGCCCAACCTCAAGCAGATAGTTGTAGTTTCC-----------------------------------------------------------AGTAATTGCTTTC-----------TGCGGGCTGTAATTATGCTTTTCTT
dp5 XR_group8:6959346-6959614 + GGTGCGACTACGTCATCTCTAGCAT------------CAGTC-AGTAACATCTGT----TCCGAAGATAATGTGTTTGGGCAGGGAGGGAGGGAGGAGGGAGGCAGTCACATACAGCCCC-----------------------------AT---ACAATACCAAT--CGAGTT-G-ATGTTGTTTTCCCAACTGTTGA--TGTCTGG-----CTCC--CTGTGTC------------C--------------------ACAAAGCGGGTTTGTTTCAAAGG----------------------------------------------GCGTACGCAAGGTCGTCCCCGTA--------------------------CTCCATTGAAAATAATTGCATTCTGTGCAATTTATCATTCTTTTAATTATAATTTCCCC
droPer2 scaffold_36:348384-348648 - GGTGCGACTACGTCATCTCTAGCAT------------CAGTC-AGTAACATCTGT----TCCGAAGATAATGTGTTTGGGCAGGGAG----GGAGGAGGGAAGTAGTCACATACAGCCCC-----------------------------AT---ACAATACCAAT--CGAGTT-G-ATGTTGTTTTCCCAACTGTTGA--TGTCTGG-----CTCC--CTGTGTC------------C--------------------ACAAAGCGGGTTTGTTTCAAAGG----------------------------------------------GCGTACGCAAGGTCGTCCCCGTA--------------------------CTCCATTGAAAATAATTGCATTCTGTGCAATTTATCATTCATTTAATTATAATTTCCCC
droWil2 scf2_1100000004822:2980638-2980654 - GGCGCGACGACGTCATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGTGCGACTACGTCATCTGTGGCATCTG------AATCGGCC-GAAAACATCTGGCGGTGCGAAAGATAGTGTG----------------------------------------------------------CGGAATA---------CAC---ATCATTCAAAG--CAACTT----CATCATCGTCACGATCGTTAT--TGAATGG-----AGGG--CTGGGTT------------T-----------------AC-GAAAAGCGA----TTTTAAAAGG----------------------------------------------GCGTACCCAAGGTCGTCCAAACTCG-AATCCAGTTCTATCCACA---AAC---------AGTGCTTAGATTCCATGGTAATTGTGCGCAATTTCACCACAATTTACCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................TT----CATCATCGTCACGATCG.................................................................................................................................................................................................................................................1912.00220000000000000000
..........CGTCATCTGTGGCATCTG------.................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
........................TCTG------AATCGGCC-GAAAACATC...............................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.............CATCTGTGGCATCTG------AATCGG...........................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
............TCATCTGTGGCATCTG------AATCG............................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
..........................................................................................................................................................................CTT----CATCATCGTCACGATCGT................................................................................................................................................................................................................................................2111.00110000000000000000
...GCGACTACGTCATCTGTGGCATCTG------A................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.GTGCGACTACGTCATCTGTGGCATCTG------.................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................AGGTCGTCCAAACTCG-AATCC.............................................................................2111.00100000100000000000
..........................................................................................................................................................................CTT----CATCATCGTCACGATCGG................................................................................................................................................................................................................................................2120.50110000000000000000
droSec2
GGTGCGACTACGTCATCTGTGGCATCTG------AATCGGCC-GAAAACATCTGGCGGTGCGAAAGATAGTGTG----------------------------------------------------------CGGAATA---------CAT---ATCATTCAAAG--CAACTT----CATCATCGTCACGATCGTTAT--TGAATGG-----AGGG--CTGGGTT------------T-----------------AC-AAAAAGCGG----TTTTAAAAGG----------------------------------------------GCGTACCCAAGGTTATTCCAACTCG-AATCCAGTTCTATCCACA---AAC---------AGTGCTTAGATTCCATGGTAATTGTGCGCAATTTCGCCACAATTTACCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................CTGTGGCATCTG------AATCGGCC-G.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
...............TCTGTGGCATCTG------AATCGGCC-........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.........................................C-GAAAACATCTGGCGGTGCGAA...................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
dm3
GGCGCGACTACGTCATCTGTGACATCTG------AATCGGTC-GAAAACATCTGGCGGTGCGAAAGATAGTGTG----------------------------------------------------------CGGAATA---------CAC---ATCATCCAAAG--CAACTT----CATCATCATCACGATCGTTAT--TGAATGG-----AGGG--CTGGGTT------------T-----------------AC-AAAAAGCGA----TCTTAAAAGG----------------------------------------------GCGTACCCAAGGTCGTCCAAACTCG-AATCCAGTTCTATCCACA---AAC---------AGTGCTTAGATTCCATAGTAATTGTGCGCAATTTCACCACAATTTACCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................CTGGGTT------------T-----------------AC-AAAAAGCGA----TC..................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CGTTAT--TGAATGG-----AGGG--CTGG.....................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000100000000000000000000000000000000000000000000000000
....................................................TGGCGGTGCGAAAGATAGTGT..........................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000
..............................................................AAAGATAGTGTG----------------------------------------------------------CGGAATA---------CA.............................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................TTAAAAGG----------------------------------------------GCGTACCCAAGGT...............................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................GATCGTTAT--TGAATGG-----AGGG--C........................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................GATTCCATAGTAATTGTGCGC....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................................TCTGGCGGTGCGAAAGAT...............................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................CGATCGTTAT--TGAATGG-----AGGG--.........................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GCGGTGCGAAAGATAGTG...........................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................TT----CATCATCATCACGATCGTT...............................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TCACGATCGTTAT--TGAATGG-----...............................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATCTGTGACATCTG------AATCGGT..........................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................ATCGTTAT--TGAATGG-----AGGG--C........................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000
.......................................................CGGTGCGAAAGATAGTGTG----------------------------------------------------------CGG............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
....................................................TGGCGGTGCGAAAGATAGTG...........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GCGA----TCTTAAAAGG----------------------------------------------GCGTA.......................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....................................................................................................................................................CAC---ATCATCCAAAG--CAACTT----C.................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................AGCGA----TCTTAAAAGG----------------------------------------------GCG.........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
......ACTACGTCATCTGTGACATCT........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTAT--TGAATGG-----AGGG--CTGGGT...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.........................CTG------AATCGGTC-GAAAACATC...............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GGTGCGAAAGATAGTGTG----------------------------------------------------------CG.............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................ATA---------CAC---ATCATCCAAAG--CAAC........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................G-AATCCAGTTCTATCCACA---AA...........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................CTGTGACATCTG------AATCGGTC-G.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................GATAGTGTG----------------------------------------------------------CGGAATA---------CA.............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................GG-----AGGG--CTGGGTT------------T-----------------AC-AAAAA............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................AAAAGG----------------------------------------------GCGTACCCAAGGTCG.............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................CCACA---AAC---------AGTGCTTAGATTC....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TCTGGCGGTGCGAAAGATAGTGT..........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
........................................................................................................................................................................................................TGAATGG-----AGGG--CTGGGTT------------T-----------------AT-.................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................GTTAT--TGAATGG-----AGGG--CTGGG....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................GAAAACATCTGGCGGTGCGA....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..CGCGACTACGTCATCTGTGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............CATCTGTGACATCTG------AATCGG...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.........................................................GTGCGAAAGATAGTGTG----------------------------------------------------------CGGA...........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...GCGACTACGTCATCTGTGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................T--TGAATGG-----AGGG--CTGGGTT------------T-----------------A...................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................AT--TGAATGG-----AGGG--CTGGGT...................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CGTTAT--TGAATGG-----AGGG--CTG......................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.......................................................................................................................................................................................CATCACGATCGTTAT--TGAATGG-----AGG............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CACGATCGTTAT--TGAATGG-----AG.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.......................................................CGGTGCGAAAGATAGTGTG----------------------------------------------------------CGGAA..........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CGTTAT--TGAATGG-----AGGG--T........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................CGGTGCGAAAGATAGTGTG----------------------------------------------------------CG.............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................CGAAAGATAGTGTG----------------------------------------------------------CGGAA..........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................................................................................................................................................................................................CGTTAT--TGAATGG-----AGGG--C........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CGATCGTTAT--TGAATGG-----AGG............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................GGTGCGAAAGATAGTGTG----------------------------------------------------------CGG............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TCTTAAAAGG----------------------------------------------GCGTACCCAAGGTCGTC...........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................CCAAGGTCGTCCAAACTCG-AA................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................AAAACATCTGGCGGTGCGAA...................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................GTTAT--TGAATGG-----AGGG--CTG......................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................GTGCGAAAGATAGTGTG----------------------------------------------------------CGGAA..........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
droEre2
GGCGCGACTACGTCATCTGTGGCATCTG------ATTCGGCC-GAAAACATCTGGCAGTGCGAAAGATATTGTG----------------------------------------------------------TAGAATA---------CAC---ATCATCCAAAG--CAACTT----CATCATCATCATGATCATCAG--TGAATGG-----CGGG--CTGGGTT------------TTCAATTCGGTTCCGTT-CC-AAAAAGCGA----TCTTAAAAGG----------------------------------------------GCGTCTCCAAGGTCGTCCAAACTCA-AATCCAGTTCTATCTACA---AAG---------AGTGTTTACATTCCATGGTAATTGTGCGCAATTTCACCACAATTTACCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............CATCTGTGGCATCTG------ATTCGGC..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
.....................................................................................................................................................................................................................................................................AAGCGA----TCTTAAAAGG----------------------------------------------GC..........................................................................................................1811.0011000000
...............................................................................................................................................................................................................................TT------------TTCAATTCGGTTCCGTT-....................................................................................................................................................................................1911.0010100000
droYak3
GGCGCGACTACGTCATCAGTGGCATCGGAATCGGAATCGGCC-GAAAACATCTGGCGGTGCGAAAGATAGTGTG----------------------------------------------------------CGGAATA---------CAC---ATCATCCAAAG--CAGCTT----CATCATCATCACGATCATTAG--TG------------GA--CTGGGTT------------TTAAGTTCGGTTCCGTT-CC-AAAAAGCGA----TCTTAAAAGG----------------------------------------------GCGTCCCCAAGGTCGCCCAAACTCA-AATCCAGTTCTATCCACA---AAA---------AGTGCTTATATTCCACTGTAATTGTGCGCAATTTCACCACTATTTAACTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
GGCGCGACTACGTCATCTGTGGCAT------------CGGCC-AAAAACATCTGGCGATGCGAAAGATAATGTG----------------------------------------------------------CGGAATA---------CAC---ATCGCTTAAAA--CAACAT----CATCATCAT---------------------AAGGGAGGG--C-----TTTAATTTTGTTTTTAGTTTCGGTTCCGTT-AG-AAAAAGTGG----TTTTAAAAGG----------------------------------------------GCGTTTACAAGGTCGCTCGGACTTA-ATTCCAGTTCTATTCACATTTAAC---------ACTGTTCACA----AAAGCAATTTTTCGCCATTTT--TGCTATTTACCTSizeHit CountTotal NormTotal
No Reads
droBia1
GGCGCGACTACGTCATCTGCGACAT------------CGGCC-AAAAACATCTGGCGGTGCGAAAGATAGTGTG----------------------------------------------------------CGGAACA---------CAC---ATCTTCCAAAA--C--CCACAT-CATCGTCAT---CACCATTCCAC-------AGGGGAGG-------GTTTTAATG------TCGCTTTCGGTTCCGTT-CTGAAAACGCGG----TCTCAAAAGG----------------------------------------------GCGTCCACAAGGTCGCTCCAACTCG-AATCCAGTTCTATTCACG---AAT---------ACTCTGTATAATCCGTGGTAATCGTGCGCAATTTCACTGCCATTTACCTSizeHit CountTotal NormTotal
No Reads
droTak1
GGCGCGACTACGTCATCGGTGGCAT------------CGGTT-AAAAACATCTGGCGGTGCGAAAGAT-------------------------------------------------------------------------------------------CCAAAA--C--CTACAT-CATCATTTTC-----------GA-------AGGGGA-------GGGTTTTAAT------------TTC--------T-GA-AAAAAACGC----TCTTAAAAGG----------------------------------------------GCGTCCACAAGGTCGCTCGCACTCA-AATCCAGTTCTATTCACA---AAC---------ACTCCTCACAATTCAAAGTAATTGTGCGCAATTTCGCAACAATTTACCTSizeHit CountTotal NormTotal
No Reads
droEle1
GGCGCGACTACGTCATCGTT----TTTG---------------AAAAACATCTGGCGGTGCAAAAGATAATGTG----------------------------------------------------------CGGAATAGGCAC----CA--TCATCATCCAAAA--CAATAT----CATCATTATC------GTT---------------G-------TGGGTT------------T-----TCAGTTCCATT-TCAAAAAAGCGG----TCCTAAAAGG----------------------------------------------GCATCTCCAA-GTCGCTCGATCCCAAAATCCAGTTCTATTCACA---AAC---------ACCCTCTATAATTCGAAGTAATTGTGCGCAATTTC----------CCCTSizeHit CountTotal NormTotal
No Reads
droRho1
GGCGCGACTACGTCATTGCTA----------------------AAAAACATCTGGCGTTGCGAGAGATAATGTT----------------------------------------------------------CAAAATA---------CACATCATCATACAAAA--CAACAT----CATCATT------------------------GGGGA-------GGGTT------------T-----TCAATTCCATT-CCAAAGAAGCGG----TCTTAAAAGG----------------------------------------------GCATCTCGAAGGTCGCTCGAACCCAAAAGCCAGTTCTATTCACA---AAC---------ACTCT----AATTCGAAGTAATTGTGTGCAG-----------TTTACCTSizeHit CountTotal NormTotal
No Reads
droFic1
GGCGCGACTACGTCATCTGTGGCAT------------CGGCC-AAAAACATCTGGCGGTGCGAAAGATAATGTG----------------------------------------------------------CTTGGTACTC-CTATTCAC---ATCATACGAAA--CAACAT----CATCATCGC---GAGA--------------GAGGGAGG-------GTTTCATTT------TCGAATTCGGTTCCGTT-CC-AAAAAGCGG----TCTTAAAAGG----------------------------------------------GCGTCGTCAAGGTCGCCCAAAACCAAAATCCAGTTCTAATCATG---AAC---------TCCCTTTGAAATTTG-GGTAATTGCGAGCAATTTCACTCAAATGTATCTSizeHit CountTotal NormTotal
No Reads
droKik1
GGCGCGACTACGTCATCTGTGGCAT------------CGGCCAAAAAACATCTGGT---GTG-AAGATTATT-A---------------------------------CACACACAAGCACACAGAGCACACGCGATGTA---------CAC---ATCATTGGAAA--CATCAT----CATCACCGTTATGAGAGATGT--CG---GG-----CA-------------------------------GGTTCTGTTTCC-AGAAAGCAG----T-TCAAAGGG----------------------------------------------GCGGCTCCAAGGTCGCACA-----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
GGCGCGACTACGTCATCTGTAGCAT------------CAATT-CAAAACATCTGGT---GTG-AAGATAATGTG----------------------------------------------------------CGCGA-----------------ACTATCAAAGG--CTATCAACT-CATGGAGCT---------------------GAGGGAGGGCACTGGGG-----------------------------------TGAGGCCG----TTTCAAAAGGCACTCGCCCAAGGCCGCCCAACCTCAACCAGATAGTTGTTGCTTCC-------------------------------AG---------TA---ATT---------GCTTTCTGGTGGCTACTT----------CAATTATGCTCTACTCCCTCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GGCGCGACTACGTCATCTGTAGCAT------------CAATT-CAAAACATCTGGT---GTG-AAGATAATGTG----------------------------------------------------------CGCGA-----------------ACTATC-AAAACGAAACCACAT-CATGGAGCT---------------------GAGGGGGGAACCTGGGGT------------T-----------------------AGGCCG----TTTCAAAAGGCACCCGCCCAAGGCCGCCCAACCTCAAGCAGATAGTTGTAGTTTCC-----------------------------------------------------------AGTAATTGCTTTC-----------TGCGGGCTGTAATTATGCTTTTCTTSizeHit CountTotal NormTotal
No Reads
dp5
GGTGCGACTACGTCATCTCTAGCAT------------CAGTC-AGTAACATCTGT----TCCGAAGATAATGTGTTTGGGCAGGGAGGGAGGGAGGAGGGAGGCAGTCACATACAGCCCC-----------------------------AT---ACAATACCAAT--CGAGTT-G-ATGTTGTTTTCCCAACTGTTGA--TGTCTGG-----CTCC--CTGTGTC------------C--------------------ACAAAGCGGGTTTGTTTCAAAGG----------------------------------------------GCGTACGCAAGGTCGTCCCCGTA--------------------------CTCCATTGAAAATAATTGCATTCTGTGCAATTTATCATTCTTTTAATTATAATTTCCCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................CAGGGAGGGAGGGAGGAGGG...............................................................................................................................................................................................................................................................................................................................................2022.5050110003000
................................................................................CAGGGAGGGAGGGAGGAG.................................................................................................................................................................................................................................................................................................................................................1822.0040210001000
................................................................................CAGGGAGGGAGGGAGGAGG................................................................................................................................................................................................................................................................................................................................................1922.0040300000010
................................................................................................................................................................................................................................................................................TTTCAAAGG----------------------------------------------GCGTACGCAAGG................................................................................................2111.0010100000000
...........................................................................TTGGGCAGGGAGGGAGGGA.....................................................................................................................................................................................................................................................................................................................................................1911.0010001000000
............................................................................................................................................................................................CAACTGTTGA--TGTCTGG-----CTCC--.........................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................TTTGTTTCAAAGG----------------------------------------------GCGTACGC....................................................................................................2111.0010100000000
....................................................................................GAGGGAGGGAGGAGGGAG.............................................................................................................................................................................................................................................................................................................................................1870.2920200000000
.................................................................................AGGGAGGGAGGGAGGAGGG...............................................................................................................................................................................................................................................................................................................................................1950.2010100000000
.................................................................................AGGGAGGGAGGGAGGAGG................................................................................................................................................................................................................................................................................................................................................1880.1310100000000
....................................................................................GAGGGAGGGAGGAGGGAT.............................................................................................................................................................................................................................................................................................................................................18150.0710100000000
.................................................................................AGGGAGGGAGGGAGGAGA................................................................................................................................................................................................................................................................................................................................................18200.0510000001000
droPer2
GGTGCGACTACGTCATCTCTAGCAT------------CAGTC-AGTAACATCTGT----TCCGAAGATAATGTGTTTGGGCAGGGAG----GGAGGAGGGAAGTAGTCACATACAGCCCC-----------------------------AT---ACAATACCAAT--CGAGTT-G-ATGTTGTTTTCCCAACTGTTGA--TGTCTGG-----CTCC--CTGTGTC------------C--------------------ACAAAGCGGGTTTGTTTCAAAGG----------------------------------------------GCGTACGCAAGGTCGTCCCCGTA--------------------------CTCCATTGAAAATAATTGCATTCTGTGCAATTTATCATTCATTTAATTATAATTTCCCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................TTGGGCAGGGAG----GGAGGAGGG...............................................................................................................................................................................................................................................................................................................................................2112.002010010
................................................................................CAGGGAG----GGAGGAGGGAA.............................................................................................................................................................................................................................................................................................................................................1811.001000100
............................................................................TGGGCAGGGAG----GGAGGAGGGAA.............................................................................................................................................................................................................................................................................................................................................2211.001000001
...................................................................................................................................................................................................................................................................................CAAAGG----------------------------------------------GCGTACGCAAGGTCG.............................................................................................2111.001010000
droWil2
GGCGCGACGACGTCATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads

Generated: 05/18/2015 at 05:17 PM