ID:

dsi_18258

 Coordinate:

2l:5009118-5009279 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.72 -19.52 -19.52

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TATTTCAGCTATATACAAAATCAATCGTATCGATCGATCATTTATTTTTTGCCTCTACACATATTTTGTGTTGCCGTTTTTGTTGCGTATATTATTTTGTGTTGTATTTTTGGTACTCAAAATTCTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGAGCCCATGCAAATGTTTTAAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCA
**************************************************......(((((.....)))))...(((((...((((((......(((((((.(((((.(((((.......................................))))).))))).)).)))))....)))))).......)))))..................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 GSM343915
embryo
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M053
female body
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR902009
testis
...............................................................................................................................................................................................................................................ATCCCTGCGTCGTCTATCCGGC. 22 0 1 4.00 4 4 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCCGGC. 23 0 1 3.00 3 2 0 1 0 0 0 0 0
....................................................................................................................................................................................................................ATTGACCGATCTCCGGCT................................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTTCCAGATTGACCGATCTCCGGCTG............................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................CTCCGGCTGCGTCTCCAATCCCTGCGT............. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TGCGTCTCCAATCCCTGCGTCGT.......... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
........CTATATACAACATCCATCGTA......................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................................AATCCCTGCGGCGTATATCC.... 20 2 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TCCAATCCCTGCGTCGTCTATCCGGCA 27 0 1 1.00 1 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................CCAGATTGACCGATCTCCGGCTGC.............................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................TGTGTTGTTCTCTTGGTACTCAA.............................................................................................................................................. 23 3 1 1.00 1 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................CCAATCCCTGCGTCGTCTATCCGG.. 24 0 1 1.00 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................GTCTCCAATCCCTGCGTCGTCT........ 22 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................................................................TCCGCCCATTCTAACCCTCCA............................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0
......................................................................................................................................................................................................................TGACCGATCTCCGGCTGC.............................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................CCCTGCGTCGTCTATCCGGC. 20 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATTGACCGATCTCCGGCTGCGTCT.......................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGACCGATCTCCGGCTGCGTCTCC........................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................AAAATTCTTTCGTCCGCCC............................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TTCCAGATTGACCGATCTCCGGCG................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GATCTCCGGCTGCGTCTCCAATCCCT................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0
............................................................................................TAGTTTGAGGTGTATTTTTGGT.................................................................................................................................................... 22 3 6 0.17 1 0 0 0 1 0 0 0 0
........CTATATACGACTTCAATCGT.......................................................................................................................................................................................................................................... 20 3 10 0.10 1 0 1 0 0 0 0 0 0
..........................................................................................................................TTCTTACGTCCGACGATT.......................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

ATAAAGTCGATATATGTTTTAGTTAGCATAGCTAGCTAGTAAATAAAAAACGGAGATGTGTATAAAACACAACGGCAAAAACAACGCATATAATAAAACACAACATAAAAACCATGAGTTTTAAGAAAGCAGGCGGGTAAGATTGGGAGGTAGGTTTGTATGTGGCGGTTCTCGGGTACGTTTACAAAATTTACGAGGTCTTGGGAAAGGTCTAACTGGCTAGAGGCCGACGCAGAGGTTAGGGACGCAGCAGATAGGCCGT
**************************************************......(((((.....)))))...(((((...((((((......(((((((.(((((.(((((.......................................))))).))))).)).)))))....)))))).......)))))..................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 GSM343915
embryo
...........................................................................................................................................................TTGTAAGTGGCGGTTC........................................................................................... 16 1 2 0.50 1 0 0 1 0 0 0
.............................................................................................................................................................GTATGAGGGGGGTCTCGGGT..................................................................................... 20 3 6 0.50 3 3 0 0 0 0 0
....................................................................................................................................GCGGGTAAGATTGGTA.................................................................................................................. 16 1 3 0.33 1 0 1 0 0 0 0
............................................AAATAGCGGAGATGTGGATA...................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 1 0
......................TTAGCGTAGCTAGCAAGGAAA........................................................................................................................................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 1
.........................................................................................................................................................................................................TGGGAATGATCGAACTGGC.......................................... 19 3 5 0.20 1 0 0 0 1 0 0
......................................................................................................................................................TAGGTATGTATGTTGCGGCT............................................................................................ 20 3 6 0.17 1 0 1 0 0 0 0
..............................................................................................................................................................TATGTGGGGGTTCTTGGGTT.................................................................................... 20 3 13 0.15 2 2 0 0 0 0 0
...............................................................................................................................................................................................................ATGTTTAACTGGGTAGAGG.................................... 19 3 20 0.05 1 0 0 0 0 0 1
..........................................................................................................................................AAGATTGGGAGGTCGT............................................................................................................ 16 2 20 0.05 1 0 0 0 1 0 0
..............................................................................................................AACATGAGTTTTAAG......................................................................................................................................... 15 1 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:5009068-5009329 + dsi_18258 TATTT---CAGCT----------------ATATACAA--------------A-AT-CAATCGTATCGAT--CGATCATTTATTT--------------TTTGCCT-------------------CTACACAT---AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGAGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCA
droSec2 scaffold_5:3285375-3285636 + TATTT---CAGCT----------------ATATACAA--------------A-AT-CAATCGTATCGAT--CGATCATTTATTT--------------TTTGCCT-------------------CTACACAT---AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGAGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCA
dm3 chr2L:5204251-5204512 + TATTT---CAGCT----------------ATATACAA--------------A-AT-CAATCGTATCGAT--CGATCATTTATTT--------------TTTGCCT-------------------CTACACAT---AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGAGCA-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCA
droEre2 scaffold_4929:5282217-5282489 + TATTT---CAGCTTTTACT--TCTCAACTATATACAA----------------AT-CAATCGTATCAAT--CGATCATTTATT---------------TTTGCCT-------------------CTACACAA---AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTCCATCCA-ACATACACCGCCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCA
droYak3 2L:10323099-10323367 - TATTT---TAGCTCTTACT--AT-------------------------------T-CAACTGTATCGAT--CGATCATTTCTT---------------TTTGCCT-------------------CTACAAAA---AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-ATT-GTTATA--T--TATATTTTGTGT-TGTA------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGCCTCCAATCCCTGCGTCGTCTATCCGGCA
droEug1 scf7180000409005:1091081-1091357 + TAACT---TAGCTTTACCT--TCTCAACTT--TACAAG-------------A-AT-CAATCGTATCGAT--CGATCATTCGTTT-------------TTTTGCCT-------------------CTACACAA---AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAAACATACACCGCCAAGGGCC-TATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGACTGCGTCTCCAATCCCTGCGTCGTCTATCCGGAA
droBia1 scf7180000302261:643527-643786 + TATCT---CAGCTTTACCT--ACTCAACTA--TAC--------------------CA---------AAT--CGATCACTTGTT---------------TTTGCCT-------------------CTACACAT---AT--TTTGTGT-TGCCGTT-------TTC-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAATCTTGAA-GACCAAGGGCC-TATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGCCTGCGTCTCCAATCCCTGCGTCGCCTATCCGGCA
droTak1 scf7180000415704:325689-325953 - TATTTCT-TAGCTTTACCT--TCTCAACTA--TACAA--------------A---------------AT--CAATCATTCGTT---------------TTTGCCT-------------------CTACACATAT-AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAAACATAAACCACCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGACTGCGTCTGCAATCCCTGCGTCGTCTATCCGGTA
droEle1 scf7180000491273:12940-13207 - TATTT---CAACT----------------AT----AA--------------ACCT-CAATCGTATCGAT--CGATCATTTGTT---------------TTTGCCT-------------------CTACACAT---ATTTTTTGTGT-TGCTGTT-------TAT-GTTGCGTAT-AT--ATTATA----TT--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCAAAACCTACACCGCCAAGGGCC-TATGCAAATGTTTT-AAATGTTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGCCGTCTATCCGGCA
droRho1 scf7180000779577:11346-11617 - TATTT---TGGTTTAACCT--TCTCAAC----TACAA--------------A-CT-CAATCGTATCGAT--CGATCATTCGTT---------------TTTGCTT-------------------CTACACAT---AC--TTTGTGT-TGCTGTT-------TTC-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAAACGTACACCACCAAGGGCC-TATGCAAATGTTTT-AAATGTTCCAGAACCCTTTCCAGATTGACCGATCTCCGTCTGCGTCTCCAATCCCTGCGCCGTCTATCCGGCA
droFic1 scf7180000453842:1043794-1044066 - TATTT---TAGCATTACCT--TCTCGAC----TACAA--------------AACC-AAATCGTATCGAT--CGATCATTTGTT---------------TTTGCCT-------------------CTACACAC---AT--TTTGTGT-TGCTGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCGAACTTACACCGCCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTGCAATCCCTGCGCCGTCTATCCGGGA
droKik1 scf7180000302643:664525-664820 - TGTTTTTTCAGCCTTATCTCTTCTTAAGT-TATACAA--------------A-CT-CAATCGTACCGATCTCGAACATTTGTT---------------TTTGCCT-------------------CTACACAAACACT--TTTGTGT-TGCTGTT-------TTT-GTTGCGTAT-TT--ATTATATAT--TCTTTTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCCTCATCCAAACTGACCTCCCCAAGAGCC-GTTGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGCCTGCGCCTGCAATCCCTGCGCCGCCTAGCCGGCA
droAna3 scaffold_12916:9961268-9961535 - TCTTATG-AAGCTTTATTT--TCTATAT----TACG---------------------AATCG-ACCGAT--CGAACATTTGTT---------------TTTGCCT-------------------TTAAACA----CT--TTTGTGT-TGCCGTTT------TTT-GTTGCATAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAAACTGACACCCACAAGAGCC-TTGGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGGTTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGCCGACTGTCTGGAA
droBip1 scf7180000396580:1066951-1067211 + TATG----AAGCTTTA-------TAAAC----TAC---------------------AAATCGTACCGAT--CGAACATTTGTT---------------TTTGCCT-------------------TTAAACA----CT--TTTGTGT-TGCCGTTT------TTT-GTTGCATAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAAAGTGACACCGACAAGAGCC-TTGGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGGTTGACCGATCTCCGGCTGCGTCTGCAATCCCTGCGCCGTCTCTCTGGAA
dp5 4_group3:2687725-2688011 - TTTTT---CATTT------GTTGTTTAGTC--TACAAAAAACAATCAGTAT----CAAATCGTATC-----CAAACATTTGT----------------TTTGCCT-------------------ATAAAGAA-T-AT--TTTGTGTTTGCTGTT-------TTT-GTTGCGTAT-ACAT---ATATTTATT--TTTTTGTGT-T--A------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCGAACATACACCG-CAAGAGCCGTTGGCAAATGTTTT-AAATGTTCTAGAACCCTTTCCAGATTGACCGATCTCCGTCTGCGTCTGCAATCCCTGCGTCGCCTCTCCGGCA
droPer2 scaffold_1:4178547-4178833 - TTTTT---CATTT------GTTGTTTAGTC--TACAAAAAACAATCAGTAT----CAAATCGTATC-----CAAACATTTGT----------------TTTGCCT-------------------GTAAAGAA-T-AT--TTTGTGTTTGCTGTT-------TTT-GTTGCGTGT-ACAT---ATATTTATT--TTTTTGTGT-T--A------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCGAACATACACC-CCAAGAGCCGTTGGCAAATGTTTT-AAATGTTCTAGAACCCTTTCCAGATTGACCGATCTCCGTCTGCGTCTGCAATCCCTGCGTCGCCTCTCCGGCA
droWil2 scf2_1100000004585:1076273-1076515 - A---------------------------------------------------------------TAAAT--CAATT-TTTGTT---------------TTTCGCT-------------------GTA--------ATTTTGTATGT-TTTTTTT-------TAT-GTTGCGTATTAAAT---ATTCTTTTT--TTTTTGTTT-TCGT-----------TTGTTTGGTACACAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAAACTTATAATCCAAAGAGCTGTAAGCAAATGTTTTCAAATACTCTAGAACACTTTCCAGATTAACCGATCTGCGACTCCGTCTGCAATCGCTACGTCGCCTCTCCGGCA
droVir3 scaffold_12963:6394547-6394766 - dvi_10631 ATT-------------------------------------------------------------------------------------------------------------------------------------T--TGTGTTT-TGCTGTGTTT--ATTTT-GTTGCGTAT-TT-------------G--ATT-TGTGT-ATTACTTTATTTTTTTTGTTTGGTTCTCAAAATTTGATTCGTCCGCCCATTCTAACACTTCATCACAACTGACAACCCCAAGAGCCGCCGGCATATGTTTT-AAATATTCTAGAACCCTTTCCAGGTTAACAGATCTGCGCCTCCGGCTGCAATCGCTGCGTCGTCTCTCCGGCA
droMoj3 scaffold_6500:25539000-25539273 - TATTA---TGATT----------------AT----------------------------------AGTT--GGAAAATTTAGT---------------ATTGCTTATTCCTTTTGCTTATTATTGTATAAG----TT--TTTGTGTTTGCTGTATTTTTCTTTTGTTTGCGTGT-TT-------------G--ATTTGTTGTTTTTA-----------CTTTCTGGTACTCAAAATTTGATTCGTCCGCCCATTCTAACCCTTCATCAAAACTGACAAACTTAAGAGCCGCCAGCATATGTTTT-AAATATTCTAGAACACTTTCCAGGCTAACCGATCTTCGACTGCGGCTGCAATCCCTGCGCCGTCTATCCGGCA
droGri2 scaffold_15252:9622607-9622851 - TATC--------------------------------------------------------------AA---------TTTATTTTTTGCAACATTTTTTTTGCTT---------------------AAATA----TT--TTTGTGTTTGCTGTTTTT--TTTTTTTTTGCGTAT-GT-------------------TTGATT-TATG-----------TTTTTTGGTACTCCAAAATTTTTTCGTCCGCCCATTCTAACACTTCATCAAAACTGACAACGCCTAAAGCCGCCAGCATATGTTTT-AAATATTCTAGAACCCTTTCCAGATTGACCGATCTCCGGCTACGTCTCCAATCCCTGCGCCGCCTCTCTGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TATTT---CAGCT----------------ATATACAA--------------A-AT-CAATCGTATCGAT--CGATCATTTATTT--------------TTTGCCT-------------------CTACACAT---AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGAGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGTCTATCCGGC.2214.00400400000000000000
..................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCCGGC.2313.00301200000000000000
........................................................................................................................................................................................................................................................................................................................................ATTGACCGATCTCCGGCT................................1812.00200200000000000000
.................................................................................................................................................................................................................................................................................................................................TTTCCAGATTGACCGATCTCCGGCTG...............................2612.00200200000000000000
..................................................................................................................................................................................................................................................................................................................................................CTCCGGCTGCGTCTCCAATCCCTGCGT.............2711.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................................TGCGTCTCCAATCCCTGCGTCGT..........2311.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................TCCAATCCCTGCGTCGTCTATCCGGCA2711.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................CCAGATTGACCGATCTCCGGCTGC..............................2411.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................CCAATCCCTGCGTCGTCTATCCGG..2411.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................GTCTCCAATCCCTGCGTCGTCT........2211.00100000000000100000
....................................................................................................................................................................................................................................................TCCGCCCATTCTAACCCTCCA.................................................................................................................2111.00100001000000000000
..........................................................................................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTGC..............................1811.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CCCTGCGTCGTCTATCCGGC.2011.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................ATTGACCGATCTCCGGCTGCGTCT..........................2411.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTGCGTCTCC........................2411.00100000000000100000
.......................................................................................................................................................................................................................................AAAA-TTCTTTCGTCCGCCC...............................................................................................................................1911.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................TTCCAGATTGACCGATCTCCGGCG................................2411.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................GATCTCCGGCTGCGTCTCCAATCCCT.................2611.00100010000000000000
droSec2
TATTT---CAGCT----------------ATATACAA--------------A-AT-CAATCGTATCGAT--CGATCATTTATTT--------------TTTGCCT-------------------CTACACAT---AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGAGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCCG...2111.0010001
............................................................................................................................................................................................................................................................................................................................................................GTCTCCAATCCCTGCGTCGT..........2011.0010010
..................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCCGGC.2311.0010100
.........................................................................................................................................................................................................................................................................................................................................TTGACCGATCTCCGGCTGCGT............................2111.0010010
dm3
TATTT---CAGCT----------------ATATACAA--------------A-AT-CAATCGTATCGAT--CGATCATTTATTT--------------TTTGCCT-------------------CTACACAT---AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGAGCA-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................TGCTCCAGAACCCTTTCCAGATTGAC............................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
...................................................................................................................................................................................................................................................................................CACCGCCAAGAGCA-CATGCAAATGTT............................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................TCCAATCCCTGCGTCGTCTATCCGGCA2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCCGGC.2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CCGCCAAGAGCA-CATGCAAATGTTT...........................................................................2512.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GTCTCCAATCCCTGCGTCGT..........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
.........................................................................................................................................................................................................................................................................TCCAAACATACACCGCCAAGAGCA-CA......................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTGC..............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CCTGCGTCGTCTATCCGGC.1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................T-AAATGCTCCAGAACCCTTTCCAGATT...............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGTCTATCCGG..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTGCGT............................2011.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TCCAATCCCTGCGTCGTCTAT......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TCTTTCGTCCGCCCATTCTAACCCTCCAT................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GATCTCCGGCTGCGTCTCCA.......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................TCTCCGGCTGCGTCTCCAATCCCTGCGT.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AAGAGCA-CATGCAAATGTTTT-.........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TTTT-AAATGCTCCAGAACCCTTTCCA...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TCCATCCAAACATACACCGCCAAGAGCA-CA......................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................TCTCCGGCTGCGTCTCCAATCC...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................TTTTGTGT-TGTA------------TTTTTGGTACTC...................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AT--TTTGTGT-TGCCGTT-------TTT-G....................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GATTGACCGATCTCCGGCTGCGTCT..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................................................................................................................................................................................................................................................................................................................................................ATCTCCGGCTGCGTCTCCA.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CGTCTCCAATCCCTGCGTCGTCTATC.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CCCTGCGTCGTCTATCCGGC.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CTGCGTCGTCTATCCGGCA1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTCGTCCGCCCATTCTAACCCTCCATC...............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CAAGAGCA-CATGCAAATGTTTT-AAA......................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TCCCTGCGTCGTCTATCCGG..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................TATACAA--------------A-AT-CAATCGTATCGAT--CGAT...............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGTCTATCCGGCA2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................CCGGCTGCGTCTCCAATC....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CATTCTAACCCTCCATCCAAACATA.......................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................T---AT--TTTGTGT-TGCCGTT-------TTT-G....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGTCTCCA.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................................................................................CCAAACATACACCGCCAAGAGCA-CATGC...................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................T-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-...............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CTTTCCAGATTGACCGATCTCCGGCTATC.............................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................ACTCAAAA-TTCTTTCGTCCGCCCATTCT..........................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TTCTTTCGTCCGCCCATTCTAACCC.....................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GGCTGCGTCTCCAATCCCTGCGT.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CTGCGTCGTCTATCCGGC.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCCGGCA2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................TT--------------TTTGCCT-------------------CTACACAT---AT--TT.............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TTTTTGGTACTCAAAA-TTCTTTCGTCC...................................................................................................................................2711.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CATTTATTT--------------TTTGCCT-------------------CTACACAT---A..................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CTCCAATCCCTGCGTCGTCTATCCGGCA2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................TCTCCAATCCCTGCGTCGTCTATCCGGCA2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTGACCGATCTCCGGCTGCGTCTCCAA......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................AACATACACCGCCAAGAGCA-........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AAGAGCA-CATGCAAATGTTT...........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCC....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................CAAACATACACCGCCAAGAGCA-CATG....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................CTCCAGAACCCTTTCCAGATTGACCGA.........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ATCTCCGGCTGCGTCTCCAATCCCTGC...............2711.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CAGAACCCTTTCCAGATTGAC............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGTCTCC........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TCGAT--CGATCATTTATTT--------------TTTGCC..................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................CACCGCCAAGAGCA-CATGCAAATGTTT...........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................AACCCTTTCCAGATTGACCG..........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................TGTGT-TGTA------------TTTTTGGTACTCAAAA-..............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AT---AT--TTTGTGT-TGCCGTT-------TTT-.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TACAA--------------A-AT-CAATCGTATCGAT--CGAT...............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................AGATTGACCGATCTCCGGCTGCGTCTC.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TCCAATCCCTGCGTCGTCTATCCGG..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGTCTC.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTGACCGATCTCCGGCTGC..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................T-AAATGCTCCAGAACCCTTTC.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TGCGTCGTCTATCCGGCA1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................TCAAAA-TTCTTTCGT.....................................................................................................................................1530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
droEre2
TATTT---CAGCTTTTACT--TCTCAACTATATACAA----------------AT-CAATCGTATCAAT--CGATCATTTATT---------------TTTGCCT-------------------CTACACAA---AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTCCATCCA-ACATACACCGCCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGTCTCC........................2312.0020000110
..................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCCGGC.2312.0020100100
..............................................................................................................................................................................................................................................................................................................................................................CTCCAATCCCTGCGTCGT..........1811.0010100000
................................................................................ATT---------------TTTGCCT-------------------CTACACAA---AT--T..............................................................................................................................................................................................................................................2111.0011000000
...................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGTCTATCCGGC.2211.0010000100
..................................................................................................................................................................................................................................................................................................................................TTCCAGATTGACCGATCTCC....................................2011.0010100000
.......................................................................................................................................................................................................................................................................................................................................GATTGACCGATCTCCGGCTGC..............................2111.0011000000
droYak3
TATTT---TAGCTCTTACT--AT-------------------------------T-CAACTGTATCGAT--CGATCATTTCTT---------------TTTGCCT-------------------CTACAAAA---AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-ATT-GTTATA--T--TATATTTTGTGT-TGTA------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGCCTCCAATCCCTGCGTCGTCTATCCGGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................GCGCCTCCAATCCCTGCGTC............2012.00200100010000
..............................................................................................................................................................................................................................................................................................................................................................CTCCAATCCCTGCGTCGTCTATCCGGC.2711.00100100000000
......................................................................................................................................................................................................................................................................................................................................................GGCTGCGCCTCCAATCCCTGCGTCGTC.........2711.00100100000000
...........................................................................................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGCCTC.........................2211.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................CTCCAATCCCTGCGTCGTC.........1911.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGTCTATCCGGC.2211.00100100000000
...........................................................................................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGCCTCC........................2311.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................CTCCAATCCCTGCGTCGTCTA.......2111.00100000010000
...........................................................................................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGCCTCCAATC....................2711.00101000000000
......................................................................................................................................................................................................................................................................................................................................................GGCTGCGCCTCCAATCCCTGCGTC............2411.00101000000000
.....................................................................................................................................................................................................................................................................................................................................CAGATTGACCGATCTCCGGCT................................2111.00100100000000
........................................................................................................................................................................................................................................................................................................................................ATTGACCGATCTCCGGCTGCGC............................2211.00100000010000
...............................................................................................................................................................................................................................................................................................................T-AAATGCTCCAGAACCCTT.......................................................1911.00100100000000
.......................................................................................................................................................GTT-------TTT-GTTGCGTAT-ATT-GTT....................................................................................................................................................................................................2111.00100100000000
droEug1
TAACT---TAGCTTTACCT--TCTCAACTT--TACAAG-------------A-AT-CAATCGTATCGAT--CGATCATTCGTTT-------------TTTTGCCT-------------------CTACACAA---AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAAACATACACCGCCAAGGGCC-TATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGACTGCGTCTCCAATCCCTGCGTCGTCTATCCGGAASizeHit CountTotal NormTotal
No Reads
droBia1
TATCT---CAGCTTTACCT--ACTCAACTA--TAC--------------------CA---------AAT--CGATCACTTGTT---------------TTTGCCT-------------------CTACACAT---AT--TTTGTGT-TGCCGTT-------TTC-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAATCTTGAA-GACCAAGGGCC-TATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGCCTGCGTCTCCAATCCCTGCGTCGCCTATCCGGCASizeHit CountTotal NormTotal
No Reads
droTak1
TATTTCT-TAGCTTTACCT--TCTCAACTA--TACAA--------------A---------------AT--CAATCATTCGTT---------------TTTGCCT-------------------CTACACATAT-AT--TTTGTGT-TGCCGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAAACATAAACCACCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGACTGCGTCTGCAATCCCTGCGTCGTCTATCCGGTASizeHit CountTotal NormTotal
No Reads
droEle1
TATTT---CAACT----------------AT----AA--------------ACCT-CAATCGTATCGAT--CGATCATTTGTT---------------TTTGCCT-------------------CTACACAT---ATTTTTTGTGT-TGCTGTT-------TAT-GTTGCGTAT-AT--ATTATA----TT--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCAAAACCTACACCGCCAAGGGCC-TATGCAAATGTTTT-AAATGTTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGCCGTCTATCCGGCASizeHit CountTotal NormTotal
No Reads
droRho1
TATTT---TGGTTTAACCT--TCTCAAC----TACAA--------------A-CT-CAATCGTATCGAT--CGATCATTCGTT---------------TTTGCTT-------------------CTACACAT---AC--TTTGTGT-TGCTGTT-------TTC-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAAACGTACACCACCAAGGGCC-TATGCAAATGTTTT-AAATGTTCCAGAACCCTTTCCAGATTGACCGATCTCCGTCTGCGTCTCCAATCCCTGCGCCGTCTATCCGGCASizeHit CountTotal NormTotal
No Reads
droFic1
TATTT---TAGCATTACCT--TCTCGAC----TACAA--------------AACC-AAATCGTATCGAT--CGATCATTTGTT---------------TTTGCCT-------------------CTACACAC---AT--TTTGTGT-TGCTGTT-------TTT-GTTGCGTAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCGAACTTACACCGCCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTGCAATCCCTGCGCCGTCTATCCGGGASizeHit CountTotal NormTotal
No Reads
droKik1
TGTTTTTTCAGCCTTATCTCTTCTTAAGT-TATACAA--------------A-CT-CAATCGTACCGATCTCGAACATTTGTT---------------TTTGCCT-------------------CTACACAAACACT--TTTGTGT-TGCTGTT-------TTT-GTTGCGTAT-TT--ATTATATAT--TCTTTTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCCTCATCCAAACTGACCTCCCCAAGAGCC-GTTGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGCCTGCGCCTGCAATCCCTGCGCCGCCTAGCCGGCASizeHit CountTotal NormTotal
No Reads
droAna3
TCTTATG-AAGCTTTATTT--TCTATAT----TACG---------------------AATCG-ACCGAT--CGAACATTTGTT---------------TTTGCCT-------------------TTAAACA----CT--TTTGTGT-TGCCGTTT------TTT-GTTGCATAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAAACTGACACCCACAAGAGCC-TTGGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGGTTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGCCGACTGTCTGGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................GGCTGCGTCTCCAATCCCTGCGC.............2312.002020000
..........................................................................................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTGCGTCTCCA.......................2511.001010000
..........................................................................................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTGCGTCT..........................2211.001001000
..............................................................................................................................................................................................................................................................................................................................................................CTCCAATCCCTGCGCCGACT........2011.001010000
...............................................................................................................................................................................................................................................................................................................................................GATCTCCGGCTGCGTCTCC........................1911.001010000
....................................................................................................................................................................................................................................................................................................................................CCAGGTTGACCGATCTCCGG..................................2011.001010000
...........................................................................................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGC............................1911.001010000
.......................................................................................................................................................................................................................................................................................................................................GGTTGACCGATCTCCGGCTGC..............................2111.001010000
...........................................................................................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGTCTCC........................2311.001010000
....................................................................................................................................................................................................................................................................................................................................CCAGGTTGACCGATCTCCGGC.................................2111.001010000
...........................................................................................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGTC...........................2011.001010000
......................................................................................................................................................................................................................................................................................................................................AGGTTGACCGATCTCCGGCTGC..............................2211.001010000
droBip1
TATG----AAGCTTTA-------TAAAC----TAC---------------------AAATCGTACCGAT--CGAACATTTGTT---------------TTTGCCT-------------------TTAAACA----CT--TTTGTGT-TGCCGTTT------TTT-GTTGCATAT-AT-------------T--ATTTTGTGT-TGTA-----------TTTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAAAGTGACACCGACAAGAGCC-TTGGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGGTTGACCGATCTCCGGCTGCGTCTGCAATCCCTGCGCCGTCTCTCTGGAASizeHit CountTotal NormTotal
No Reads
dp5
TTTTT---CATTT------GTTGTTTAGTC--TACAAAAAACAATCAGTAT----CAAATCGTATC-----CAAACATTTGT----------------TTTGCCT-------------------ATAAAGAA-T-AT--TTTGTGTTTGCTGTT-------TTT-GTTGCGTAT-ACAT---ATATTTATT--TTTTTGTGT-T--A------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCGAACATACACCG-CAAGAGCCGTTGGCAAATGTTTT-AAATGTTCTAGAACCCTTTCCAGATTGACCGATCTCCGTCTGCGTCTGCAATCCCTGCGTCGCCTCTCCGGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGCCTCTCCGGC.2312.0020100001000
.......................................................................................................................................................................................................................................................................................................................................GATTGACCGATCTCCGTCTGCGTCTGC........................2711.0010100000000
............................................................................................................................................................................................................................................................................................................TTTT-AAATGTTCTAGAACCC.........................................................2011.0010001000000
...........................................................................................................................................................................................................................................................................................................................................GACCGATCTCCGTCTGCGTC...........................2011.0010000001000
............................................................................ATTTGT----------------TTTGCCT-------------------ATAAAGAA-T-AT--TTTG...........................................................................................................................................................................................................................................2811.0010100000000
................................................................................................................................................................................................................................................................................................................................................................GCAATCCCTGCGTCGCCTCTCCGGC.2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGCCTCTCCG...2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGCCTCTCCG...2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................CCGATCTCCGTCTGCGTCTGCAATCCCT.................2811.0010100000000
...............................................................................................................................................................................................................................................................................................................................CCTTTCCAGATTGACCGAT........................................1911.0010010000000
........................................................................................................................................................................................................................................................................................................................................ATTGACCGATCTCCGTCTGCGT............................2211.0010010000000
...................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGCCTCTCCGGCA2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................GACCGATCTCCGTCTGCGC............................1911.0010010000000
.........................................................................................................................................................................................................................................................................................................................................TTGACCGATCTCCGTCTGCGTCTGC........................2511.0010100000000
............................................................................................................................................................................................................................................................................................................................................ACCGATCTCCGTCTGCGTCTG.........................2111.0010100000000
................................................................................................................................................................................................................................................................................ATACACCG-CAAGAGCCGTTGGCA..................................................................................2311.0010000100000
.....................................................................................................................................T-AT--TTTGTGTTTGCTGTT-------TT.......................................................................................................................................................................................................................2011.0010000001000
droPer2
TTTTT---CATTT------GTTGTTTAGTC--TACAAAAAACAATCAGTAT----CAAATCGTATC-----CAAACATTTGT----------------TTTGCCT-------------------GTAAAGAA-T-AT--TTTGTGTTTGCTGTT-------TTT-GTTGCGTGT-ACAT---ATATTTATT--TTTTTGTGT-T--A------------TTTTTGGTACTCAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCGAACATACACC-CCAAGAGCCGTTGGCAAATGTTTT-AAATGTTCTAGAACCCTTTCCAGATTGACCGATCTCCGTCTGCGTCTGCAATCCCTGCGTCGCCTCTCCGGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................CTCCGTCTGCGTCTGCAATCCCTGC...............2514.004400000
..............................................................................................................................................................................................................................................................................................................................................CGATCTCCGTCTGCGTCTGC........................2012.002200000
.................................................................................................................................................................................................................................................................................................................................................................CAATCCCTGCGTCGCCTCTCCGGC.2411.001010000
.......................................................................................................................................................................................................................................................................................................................................GATTGACCGATCTCCGTCTGCGTCT..........................2511.001010000
........................................................................................................................................................................................................................................................................................................................................ATTGACCGATCTCCGTCTGCGTCTGCAA......................2811.001010000
..............................................................................................................................................................................................................................................................................................................................................................CTGCAATCCCTGCGTCGCCTCTCCGGC.2711.001010000
................................................................................................................................................................................................................................................................................................................................CTTTCCAGATTGACCGATCTCCGTCT................................2611.001100000
droWil2
A---------------------------------------------------------------TAAAT--CAATT-TTTGTT---------------TTTCGCT-------------------GTA--------ATTTTGTATGT-TTTTTTT-------TAT-GTTGCGTATTAAAT---ATTCTTTTT--TTTTTGTTT-TCGT-----------TTGTTTGGTACACAAAA-TTCTTTCGTCCGCCCATTCTAACCCTTCATCCAAACTTATAATCCAAAGAGCTGTAAGCAAATGTTTTCAAATACTCTAGAACACTTTCCAGATTAACCGATCTGCGACTCCGTCTGCAATCGCTACGTCGCCTCTCCGGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................TAACCGATCTGCGACTCCGTCTGCAAT.....................2713.00301110
.........................................................................................................................................................................................................................................................................................................................................TTAACCGATCTGCGACTCCGTCTGC........................2513.00300210
...............................................................................................................................................................................................................................................................................................................TCAAATACTCTAGAACACTTTCCAG..................................................2512.00220000
......................................................................................................................................................................................................................................................................................................................................................GACTCCGTCTGCAATCGCTACGTCG...........2512.00202000
...........................................................................................................................................................................................................................................................................................................................................AACCGATCTGCGACTCCGTCTGCAAT.....................2611.00100010
.......................................................................................................................................................................................................................................................................................................................................GATTAACCGATCTGCGACTCCGT............................2311.00110000
..........................................................................................................................................................................................................................................................................................................................................TAACCGATCTGCGACTCCGTCT..........................2211.00110000
...............................................................................................................................................................................................................................................................................................................TCAAATACTCTAGAACACTTTCCAGATT...............................................2811.00110000
.............................................................................................................................................................................................................................................................................................................................ACACTTTCCAGATTAACCGATC.......................................2211.00100010
.........................................................................................................................................................................................................................................................................................................................................TTAACCGATCTGCGACTCCGTCTGCA.......................2611.00101000
...............................................................................................................................................................................................................................................................................................................................................GATCTGCGACTCCGTCTGCAAT.....................2211.00101000
..................................................................................................................................................................................................................................................................................................................................................................AATCGCTACGTCGCCTCTCCGGC.2311.00100010
........................................................................................................................................................................................................................................................................................................................................................CTCCGTCTGCAATCGCTACGTCGC..........2411.00100100
...........................................................................................................................................................................................................................................................................................................................................................CGTCTGCAATCGCTACGTCGCCT........2311.00100010
...................................................................................................................................................................................................................................................................................................................................................................ATCGCTACGTCGCCTCTCC....1911.00110000
........................................................................................................................................................................................................................................................................................................................................ATTAACCGATCTGCGACTCC..............................2011.00110000
.....................................................................................................................................................................................................................................................................................................................................................................CGCTACGTCGCCTCTCCGGC.2011.00100010
..........................................................................................................................................................................................................................................................................................................................................TAACCGATCTGCGACTCCGTCTGC........................2411.00100100
droVir3
ATT-------------------------------------------------------------------------------------------------------------------------------------T--TGTGTTT-TGCTGTGTTT--ATTTT-GTTGCGTAT-TT-------------G--ATT-TGTGT-ATTACTTTATTTTTTTTGTTTGGTTCTCAAAATTTGATTCGTCCGCCCATTCTAACACTTCATCACAACTGACAACCCCAAGAGCCGCCGGCATATGTTTT-AAATATTCTAGAACCCTTTCCAGGTTAACAGATCTGCGCCTCCGGCTGCAATCGCTGCGTCGTCTCTCCGGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................CAGATCTGCGCCTCCGGCTGC........................2112.002020000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TGCAATCGCTGCGTCGTCTCTCCGGC.2612.002000000000000000000000000000000000000000000000000000000000000002
.......................................................................................................................................................................................................................................................................................................................................GGTTAACAGATCTGCGCCT................................1912.002000001000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................TTTATTTTTTTTGTTTGGTTCTCAAAAT..............................................................................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................TGGTTCTCAAAATTTGATTCGTCCGC.................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AACAGATCTGCGCCTCCGGC...........................2011.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ATCTGCGCCTCCGGCTGCAAT.....................2111.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTAACAGATCTGCGCCTCCGGCTGCA.......................2611.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTAACAGATCTGCGCCTCCGGCTGC........................2511.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TCCAGGTTAACAGATCTGC....................................1911.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................TTT--ATTTT-GTTGCGTAT-TT-------------G--ATT-TGTG.................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................TAT-TT-------------G--ATT-TGTGT-ATTACTTTA......................................................................................................................................................................2311.001000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TAACAGATCTGCGCCTCCGGC...........................2111.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................TTGATTCGTCCGCCCATTCTAAC.......................................................................................................................2311.001000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................TGCGTAT-TT-------------G--ATT-TGTGT-ATTACTTTAT.....................................................................................................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AACAGATCTGCGCCTCCGGCTGC........................2311.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TGATTCGTCCGCCCATTCTAACACT....................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................AGATCTGCGCCTCCGGCTGCA.......................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................AGATCTGCGCCTCCGGCTGC........................2011.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................CTCCGGCTGCAATCGCTGCGTCG...........2311.001000001000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GCAATCGCTGCGTCGTCTCTCC....2211.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................TAACAGATCTGCGCCTCCGGCT..........................2211.001000000000000000000100000000000000000000000000000000000000000000
droMoj3
TATTA---TGATT----------------AT----------------------------------AGTT--GGAAAATTTAGT---------------ATTGCTTATTCCTTTTGCTTATTATTGTATAAG----TT--TTTGTGTTTGCTGTATTTTTCTTTTGTTTGCGTGT-TT-------------G--ATTTGTTGTTTTTA-----------CTTTCTGGTACTCAAAATTTGATTCGTCCGCCCATTCTAACCCTTCATCAAAACTGACAAACTTAAGAGCCGCCAGCATATGTTTT-AAATATTCTAGAACACTTTCCAGGCTAACCGATCTTCGACTGCGGCTGCAATCCCTGCGCCGTCTATCCGGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................ATCCCTGCGCCGTCTATC.....1811.001100000
...............................................................................................................................................................................................................................................................................................................................................GATCTTCGACTGCGGCTGCA.......................2011.001000001
.....................................................................................................................................................................................................................................................................................................................................CAGGCTAACCGATCTTCGAC.................................2011.001100000
.................................................................................................................................................................................................ATTTGTTGTTTTTA-----------CTTTCTG.........................................................................................................................................................2111.001000010
..........................................................................................................................................................................................................................................................................................................................AGAACACTTTCCAGGCTAACC...........................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................GCTGCAATCCCTGCGCCGT..........1911.001100000
......................................................................................................................................................................................................................................................................................................................................................GACTGCGGCTGCAATCCCTGCGCC............2411.001100000
droGri2
TATC--------------------------------------------------------------AA---------TTTATTTTTTGCAACATTTTTTTTGCTT---------------------AAATA----TT--TTTGTGTTTGCTGTTTTT--TTTTTTTTTGCGTAT-GT-------------------TTGATT-TATG-----------TTTTTTGGTACTCCAAAATTTTTTCGTCCGCCCATTCTAACACTTCATCAAAACTGACAACGCCTAAAGCCGCCAGCATATGTTTT-AAATATTCTAGAACCCTTTCCAGATTGACCGATCTCCGGCTACGTCTCCAATCCCTGCGCCGCCTCTCTGGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTAC..............................1811.00110

Generated: 05/19/2015 at 11:07 AM