ID:

dsi_18156

 Coordinate:

2l:20998341-20998490 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.7 -8.9

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+
mature
  1. dsi_18156  2l:20998433-20998457 +
  2. dsi_1790  2l:21767526-21767550 +
  3. dsi_22902  2l:23047948-23047972 +
  4. dsi_26646  2r:1818401-1818425 +
star
  1. dsi_18156  2l:20998369-20998393 +
  2. dsi_1790  2l:21767462-21767486 +
  3. dsi_22902  2l:23047884-23047908 +
  4. dsi_26646  2r:1818337-1818361 +

Sense Strand Reads

ACGCCCGCCGGTTATGAAGGTGTGCAAAAGTCCGGCATGCCAGGCGCAGTGTGAGTATCGAAATAACGGTAAAAATGGTAGAATTACTAGTAGAATTAAGGTTTTAAAGTAAAAGAGCATACTAGATTCGTTGGAATGTACATATGTAACAGGTAGAAGAAATCGTTTCCGACCCTATAAAGTATAAACATATATATATTTTTGAACACTAGAATAATTATTCTATTGTCTTTGCTAATACCCACAAACC
******************************************************************************.....................((((((...........(((((.((.((((....)))).))..)))))...........))))))...*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 M025
embryo
 M053
female body
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M024
male body
..............................................................................................................................................TATGTAACAGGTAGAAGAAATCGTT................................................................................... 25 0 4 0.50 2 0 0 2 0 0 0 0 0 0
..............................................................................................................................TTCGTTGGAATGTACATATGTAACAGGT................................................................................................ 28 0 4 0.50 2 1 0 1 0 0 0 0 0 0
..............................................................................TAGAATTACTAGTAGAATTAAGGTT................................................................................................................................................... 25 0 4 0.50 2 1 1 0 0 0 0 0 0 0
.......................................................................................TAGTAGAATTAAGGTTTTAAAGTAAA......................................................................................................................................... 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0
..............................................................................TAGAATTACTAGTAGAATTAAGGTTT.................................................................................................................................................. 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0
...............................................................................AGAATTACTAGTAGAATTAAGGTTTT................................................................................................................................................. 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................TTCGTTGGAATGTACATATGTAACAGGTA............................................................................................... 29 0 4 0.25 1 1 0 0 0 0 0 0 0 0
....................................................GAGTATCGAAATAACGGTAAAAATGG............................................................................................................................................................................ 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0
...............................................................................AGAATTACTAGTAGAATTAAGGTT................................................................................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................TGTACATATGTAACAGGTAGAAGAAAT....................................................................................... 27 0 4 0.25 1 0 0 1 0 0 0 0 0 0
.................................................................................AATTACTAGTAGAATTAA....................................................................................................................................................... 18 0 4 0.25 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................TAGAAGAAATCGTTTCCGACCCTA......................................................................... 24 0 4 0.25 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................TATGTAACAGGTAGAAGAAATCG..................................................................................... 23 0 4 0.25 1 0 0 0 1 0 0 0 0 0
..............................................................ATAACGGTAAAAATGGTAGAATTACTA................................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TATATTGTTGAACTCTAGA..................................... 19 2 9 0.22 2 0 0 0 0 2 0 0 0 0
...........................................................................................................................................................GAAGGAATCGTTTCCGACCCTATAAAG.................................................................... 27 1 5 0.20 1 0 0 0 0 0 1 0 0 0
..............................................................................................................................................TATGTAACAGGTAGAA............................................................................................ 16 0 20 0.15 3 0 0 0 0 0 0 3 0 0
..................................................................................................................................TTAGACTGTACATATGTAA..................................................................................................... 19 2 8 0.13 1 0 0 1 0 0 0 0 0 0
............................................................................................GAAGTACGGTGTTAAAGTA........................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................TTATATTGTTGAACTCTAGA..................................... 20 3 19 0.05 1 0 0 0 0 0 0 0 0 1
.......................................................................................TAGTAGAATTAATGTC................................................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................TATGTAACAGGTAGA............................................................................................. 15 0 20 0.05 1 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TGCGGGCGGCCAATACTTCCACACGTTTTCAGGCCGTACGGTCCGCGTCACACTCATAGCTTTATTGCCATTTTTACCATCTTAATGATCATCTTAATTCCAAAATTTCATTTTCTCGTATGATCTAAGCAACCTTACATGTATACATTGTCCATCTTCTTTAGCAAAGGCTGGGATATTTCATATTTGTATATATATAAAAACTTGTGATCTTATTAATAAGATAACAGAAACGATTATGGGTGTTTGG
***********************************************************************************.....................((((((...........(((((.((.((((....)))).))..)))))...........))))))...****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
.............................................CGTCACACTCATAGCTTTATTGCCAT................................................................................................................................................................................... 26 0 4 1.00 4 3 0 1 0 0 0
............................TCAGGCCGTACGGTCCGCGTCACACTC................................................................................................................................................................................................... 27 0 4 0.50 2 2 0 0 0 0 0
............................................................................................................................................................................................................................AAGATAACAGAAACGATTATGGGTGT.... 26 0 4 0.50 2 1 0 1 0 0 0
.................................................................................................................................................................TAGCAAAGGCTGGGATATTTCATATT............................................................... 26 0 4 0.50 2 1 1 0 0 0 0
..............................................................................................................TTTTCTCGTATGATCTAAGCAACCT................................................................................................................... 25 0 4 0.50 2 0 2 0 0 0 0
..............................................................................................................TTTTCTCGTATGATCTAAGCAACCTT.................................................................................................................. 26 0 4 0.50 2 1 0 0 0 1 0
.............................................................................................................................................................................................................................AGATAACAGAAACGATTATGGGTGTT... 26 0 4 0.25 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................AATAAGATAACAGAAACGATTATGGGT...... 27 0 4 0.25 1 1 0 0 0 0 0
.........................................................................................................TTTCATTTTCTCGTATGATCTAAGCAA...................................................................................................................... 27 0 4 0.25 1 0 1 0 0 0 0
.....................................ACGGTCCGCGTCACACTCATAGCTTT........................................................................................................................................................................................... 26 0 4 0.25 1 0 0 0 1 0 0
...................................................................................................CCAAAATTTCATTTTCTCGTATTAT.............................................................................................................................. 25 1 4 0.25 1 0 0 1 0 0 0
............................................................................................................................................................................................................................AAGATAACAGAAACGATTATGGGTGTT... 27 0 4 0.25 1 0 0 1 0 0 0
..........................................................................................................................................................................................TTGTATATATATAAAAACTTGTGAT....................................... 25 0 4 0.25 1 0 0 0 0 1 0
..........................TTTCAGGCCGTACGGTCCGCGTCACACTC................................................................................................................................................................................................... 29 0 4 0.25 1 0 1 0 0 0 0
........................................................................................................................................ACATGTATACATTGTCCATCTTCT.......................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0
...............................................................................................................TTTCTCGTATGATCTAAGCAACCTT.................................................................................................................. 25 0 4 0.25 1 0 1 0 0 0 0
.....GCGGCCAATATTGCCA..................................................................................................................................................................................................................................... 16 2 16 0.25 4 0 0 0 4 0 0
......CGGCCAATACTTCCACACGTTT.............................................................................................................................................................................................................................. 22 0 4 0.25 1 0 0 0 0 0 1
.......................CGTTTTCAGGCCGTACGGTCC.............................................................................................................................................................................................................. 21 0 4 0.25 1 0 1 0 0 0 0
......................................................................................................................................................................................................................ATTAATAAGATAACAGAAACGATTAT.......... 26 0 4 0.25 1 0 0 1 0 0 0
........................................................................................................................TGATCTAAGCAACCTT.................................................................................................................. 16 0 18 0.06 1 0 0 0 1 0 0
.......................................................................................................................................................................................................AAAATGTGTGATCTGATTAA............................... 20 3 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:20998291-20998540 + dsi_18156 ACGCCCGCCGGTTATGAAGGTGTGCAAAAGTC------CGGCA-----------T---------------------------GCCAGGCGCAGTGTGAGTATCGAAATAACGGTAAAA---ATGGTAGAATTACT-AGTAGAATT-----------AAG--------------------------GTTTTA------AAGTAA-AAGAGCATACTAGATTCGTTGGAA---TGTACATATGTAACAGGTAGAAGA-AATCGTTTCCGACCCTATAAAGTATAAACATATATATATTTTTGAACA-------------CTAG-----------------------------------------------------A-----ATAATTATTCTATTGTCTTTGCTAATACCCACAAACC
droSec2 scaffold_28:270794-271020 + ACGCCCGCCGGTTATGAAGGTGTGCAAAAGTC------CGGCA-----------T---------------------------GCCAGGCGCAGTGTGAGTATCGAAATAACGGTAAAA---ATGGTAGAATTACT-AGTAGAATT-----------AAG--------------------------GTTTTA------AAGTAA-AAGAGCATACTAGATTCGTCGGAA---TGTACATATGTAACAGGTAGAAGA-AAGCGTTTCCGACCCTATAAAGGATAAACATATATATATTTTTGAACA-------------CTAG-----------------------------------------------------A-----ATAATTATTCTATT-----------------------
dm3 chr2L:21727524-21727736 + ACGCCCGGCGGTTATGAAGGTCTGCAAAAGTC------CGGCA-----------T---------------------------GCCAGGCGCAGCGTGAGTATCGAAATAACGGTCGAA---ATGGTAGAGTTACT-AGTAGAATT-----------AAA--------------------------GTTTTA------AAGTAA-AAGAGTATACTAAATTCGTTGGAA---T----GTATGTAACAGGTAGAAGA-AAGCTTTTCCGACCCTATAAAGTAAAAACATACATATATTTTTGATCA-------GGAT-------------------------------------------------------------------CATTA------------------------------
droEre2 scaffold_4845:2800996-2801287 - ACGCCCGGCGGTGATGAAGGTCTGCAAAAGTC------CGGCC-----------T---------------------------GCCAGGCGCAGTGTGAGTATCGACCTAATGGTCTCA---TGCCTAATATTGAT-AATAGAATTTATTTATATTTAA--------TATTTTTATAC--CCGTTACTTGAA------GAGTGA-AAGGTTGTACTAGGTTCGTTTAAA---A----GTATGAAACAGGTAGAAGG-AAGCCTTTCTGACCATATTAGAATCACA-----------------------------------AGCCGAGTCGGTCTGGTCATGTCCGTCTGTCCATTCGTCTGTCCATTCGTCTGTCC--A-TCCGCCTGTTCT-------------TCCG-TATGAACT
droYak3 3L:16116098-16116271 + GC------TGGTAATGAAGG----CAGAAATC------CGC--------------------------------------------------------------------------TCA---GGCCAAATG--------CAAAATGTTTTAATGTTCAAAATG----TATTTTTATAC--CCGTTACTGGTA------GAGTAA-AAGGGTATACTAGATTCGTTGAAA---A----GTATGTAACAGGCAGAAGG-AAGCGTTTCCGACCATATAAAGTATATATA--------TTCTTGATCA-----------------------------------------------------------------------------------------------------------------
droEug1 scf7180000408879:8070-8227 - GT---------------------ACAAAAATT------TGTCA-----------T---------------------------GTGTGACCTGGTTTG-GTATCGATAGGTC-------------------------------------------------------ATTAATTATAC--CAGTTACTCGTA------GAGTAA-AAGGGTATACTAGATTCGTTGAAA---A----GTATGTAACAGGTAGAAGG-AAGCGTTTCCGACCCTATAAAGTATATATA--------TTCTTGATCA-----------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302193:835685-835860 - TG--------------AAAATATGTGAATACCTTTTGACAGCA-----------T---------------------------ACCAGATAATATGGGAATA----ACTAACTTTAAAA---ATAATATA---------------T-----------AT--------GATTTTTATAC--CCCTTAGTCGTA------GAGTAA-AAGGGTATACTAGATTCGTCGGAA---A----GTATGTAACAGGTGG-AGG-AAGCGTTTCCGACCCCATAAAGTATAAATG--------T--------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000413017:189042-189233 - TA-CCCA--------------------------------------------------------------------------------GCGAAAAGGGGTAATAAAAGTGACGATAAGA---ATTGTATTATTT--------------------TT------GTATCATTATTTATAC--CCGTTACTCGTA------GAGTAA-AAGGGTATATTGTATTCGTGCAAA---A----GTATGTAACAGGGAGAAGG-ACGCGTTTCCGACCCCATAAAGTATATATA--------TTCTTGATCA-------GGATCACTAG-----------------------------------------------------C-----AGAGTCGATCTA-------------------------
droEle1 scf7180000490672:21486-21651 + CG--------------------------------------GTA-----------T---------------------------GATATCTTCAGTGTGTATTCCTAAATAAAAGTAAATTAAATTTGAGATTTA-T-CGATGATTT-----------AAAGAA----TATAATTATAA--TCGTTT---------------------------CTCGTATTAGTTGAAA---A----GTATTTAACAGGTAGAAGG-AAGCGTTTCCGACCATATAATGTATATATT--------TGTTTGATCA-----------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779718:31658-31806 - GG-A------------------------------------------------------------------------------------------------------ATAACGGG-----------T------A-----TAAAA-------ATATTTA----------ATTTTTGTTCGAAGAGTAGTTATC------AAGTAA-AAGGGTATATTGTATTCGTGCAAA---A----GTATGTAACAGGTAGAAGG-AAGCGTTTCCGACCCTATAAGGTATATATA--------TTCTTTTTCA-------GGATCACTAG------------------------------------------------------------------------------------------------
droFic1 scf7180000453811:423063-423186 + T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------GAGTAAATGGGGTATTCTGTATTTGTTGAAA---A----GTATGTAACAGGTCGAAGAAAAACACTTCCAACCCCTTAAGATATATGTA----TGTAAACTTGTATA-------------TT-------------------------------------------------------A-----ATGGTCATCAC-------------AAAT-CATAAAAA
droKik1 scf7180000302388:2039294-2039383 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAACGCACTGAAGG-AGACATTTCTGACCCTATGAAGTATGTATA----TATATTCTTGATCA-------GC--CACTAA-----------------------------------------------------ATTATTATTATTA--------------------T-TATTAATA
droAna3 scaffold_13082:3249401-3249532 + T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GAGTAT-AAGGGTATTTTCTATTCGTGCGAG---G----GTA-GTAACAGGGGGAAGG-AATCATCTCTGACCCCATAAAGTATACATA--------TTCTTGATTA-------GTA------T-----------------------------------------------------A-----TTATATATCCATATCCATCTGTGGATAT-CAGAGAAT
droBip1 scf7180000393228:50132-50309 + AA-AA-------------A--------------------------------------------------------------------A--------------CG-------AATAAAA---CTTTTAAAATGACAAAATCGAATT-----------AA------------TTTTTAC--CCGGTACTCGTA------GAGTAC-AAGGGTATATTGAATTCGTATGAA---T----GTATATAACCGAGAGAAGG-AATCATCTCCCACCCCATAAAGTATATATA----AATAT-------CAGGGCTATGC--ATATAT-----------------------------------------------------AATAAAACCACTATTC---------------------------
dp5 Unknown_singleton_1550:2345-2501 + AG-GCGG--------------------------------------------------------------------------------AGCTTGAGCGGTA------A------TAAAA---GAGATAGAGC-----------------------------------TATTTTTATAC--CCGATACTCAAA----ATGAGTAT-TGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTTCAGAAGG-AATCGTTTCCGACCCCATAAAGTATATATA--------TTCTTGATCA-----------------------------------------------------------------------------------------------------------------
droPer2 scaffold_299:18668-18886 + CG-CCCGCCAGCTATGCTAGTCTG---GCGAT------CAACTTATTAAGCACTTTCCATTAGCTGTATGTCGGCAATATTTGTGAAAGCT---------------------------------------TGATT-GACAAGAAT-----------AA--------GGTTTTTATAC--CCGATACTCAAA----ATGAGTAT-TGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGG-AATCGTTTCCGACCCTATAAAGTATATATA--------TTCTTGATCA-----------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004949:1841948-1842098 + GT-A---------A----------------------------------------------------------------------------------------CGAAAATTCGCTATAA---GTGGT------ATT-GAAGAAATT-----------T----------ATTTTTATCC--C-------CATA------GGGTGA-AATGGTATATTAAAGTCTTAAAAA---T----GTATGTAACAGACAGAAGG-AAGCTTTTTCGACCCCATAAGGTATATATG----TATATTCTTCATCA-------GAAT------------------------------------------------------------------------------------------------------
droVir3 scaffold_13036:822273-822418 + AG-T---------ATCAGAATCTGTAAAAA--------------------------------------------------------------------------------------CA---TTGGT------------------------------AC--------GGTTATTATAC--CCTGAACCCATTAAAAATGGGTAT-AAGAGCATAATTTATTTGTGCAAAGTACAAATGTATGTAACAGGCAGAAGG-AAGCATCTCCGACCCCATAAAGTATAAATA--------T--------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:19862336-19862499 + CA----------------------------------------------------T---------------------------TCCATGCACAGTGTGCATATTA-ATTATTGCCAAAC---GTAAT------------------------------AA--------GATTATTATAC--CCTGAACCCATTGAAAATGGGAAATCAGGGTATAATGGTTTTGTG-AAA---A----GTATGTAACAGGCAGAAGG-AATCATCGCAGACCCCATAAAGTATATATA--------TTCTTGATCA-----------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15081:151907-152022 + AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGTATA-TACATTTATTAAAAACATATTCGTATGTAACAGGCAGAAGA-AAGCATCTCCGGCTCCAGAAGATATCTATA--TGTATATTCTTGAACG-------TG-------------------------------------------------------------A-----ACAATTGTCGCGTTG----------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACGCCCGCCGGTTATGAAGGTGTGCAAAAGTC------CGGCA-----------T---------------------------GCCAGGCGCAGTGTGAGTATCGAAATAACGGTAAAA---ATGGTAGAATTACT-AGTAGAATT-----------AAG--------------------------GTTTTA------AAGTAA-AAGAGCATACTAGATTCGTTGGAA---TGTACATATGTAACAGGTAGAAGA-AATCGTTTCCGACCCTATAAAGTATAAACATATATATATTTTTGAACA-------------CTAG-----------------------------------------------------A-----ATAATTATTCTATTGTCTTTGCTAATACCCACAAACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................TATGTAACAGGTAGAAGA-AATCGTT..........................................................................................................................................................2540.50200000000020000000
..........................................................................................................................................................................................................................TTCGTTGGAA---TGTACATATGTAACAGGT........................................................................................................................................................................2840.50200000010010000000
.............................................................................................................................TAGAATTACT-AGTAGAATT-----------AAG--------------------------GTT.....................................................................................................................................................................................................................................2540.50200000010100000000
......................................................................................................................................T-AGTAGAATT-----------AAG--------------------------GTTTTA------AAGTAA-A....................................................................................................................................................................................................................2640.25100000000100000000
.............................................................................................................................TAGAATTACT-AGTAGAATT-----------AAG--------------------------GTTT....................................................................................................................................................................................................................................2640.25100000010000000000
..............................................................................................................................AGAATTACT-AGTAGAATT-----------AAG--------------------------GTTTT...................................................................................................................................................................................................................................2640.25100000000100000000
..........................................................................................................................................................................................................................TTCGTTGGAA---TGTACATATGTAACAGGTA.......................................................................................................................................................................2940.25100000010000000000
................................................................................................GAGTATCGAAATAACGGTAAAA---ATGG....................................................................................................................................................................................................................................................................................................2640.25100000000100000000
..............................................................................................................................AGAATTACT-AGTAGAATT-----------AAG--------------------------GTT.....................................................................................................................................................................................................................................2440.25100000010000000000
.......................................................................................................................................................................................................................................TGTACATATGTAACAGGTAGAAGA-AAT..............................................................................................................................................................2740.25100000000010000000
................................................................................................................................AATTACT-AGTAGAATT-----------AA...................................................................................................................................................................................................................................................................1840.25100001000000000000
........................................................................................................................................................................................................................................................TAGAAGA-AATCGTTTCCGACCCTA................................................................................................................................................2440.25100000000100000000
.............................................................................................................................................................................................................................................TATGTAACAGGTAGAAGA-AATCG............................................................................................................................................................2340.25100001000000000000
..........................................................................................................ATAACGGTAAAA---ATGGTAGAATTACT-A........................................................................................................................................................................................................................................................................................2740.25100000010000000000
.............................................................................................................................................................................................................................................TATGTAACAGGTAGAA....................................................................................................................................................................16200.15300000000003000000
.............................................................................................................................................................................................................................................TATGTAACAGGTAGA.....................................................................................................................................................................15200.05100000000010000000
droSec2
ACGCCCGCCGGTTATGAAGGTGTGCAAAAGTC------CGGCA-----------T---------------------------GCCAGGCGCAGTGTGAGTATCGAAATAACGGTAAAA---ATGGTAGAATTACT-AGTAGAATT-----------AAG--------------------------GTTTTA------AAGTAA-AAGAGCATACTAGATTCGTCGGAA---TGTACATATGTAACAGGTAGAAGA-AAGCGTTTCCGACCCTATAAAGGATAAACATATATATATTTTTGAACA-------------CTAG-----------------------------------------------------A-----ATAATTATTCTATT-----------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
ACGCCCGGCGGTTATGAAGGTCTGCAAAAGTC------CGGCA-----------T---------------------------GCCAGGCGCAGCGTGAGTATCGAAATAACGGTCGAA---ATGGTAGAGTTACT-AGTAGAATT-----------AAA--------------------------GTTTTA------AAGTAA-AAGAGTATACTAAATTCGTTGGAA---T----GTATGTAACAGGTAGAAGA-AAGCTTTTCCGACCCTATAAAGTAAAAACATACATATATTTTTGATCA-------GGAT-------------------------------------------------------------------CATTA------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................TAACAGGTAGAAGA-AAGCTTT..........................................................................................................................................................21122.002200000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000001200000000000000000000002000000000000000000000010020
.................................................................................................................................................................................................................................................TAACAGGTAGAAGA-AAGCTTTT.........................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................GTAACAGGTAGAAGA-AAGCTT...........................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................TGTAACAGGTAGAAGA-AAGCT............................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............TATGAAGGTCTGCAAAAGTC------CGGCA-----------T---------------------------...............................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TATGTAACAGGTAGAAGA-AAG..............................................................................................................................................................2181.1390000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200120000000000000000102000000000000000000000000000000100
...CCCGGCGGTTATGAAGGTCT..........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................GCA-----------T---------------------------GCCAGGCGCAGCGTGAGTATCGAA.......................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TCGTTGGAA---T----GTATGTAACAGGTAGA.....................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GGTTATGAAGGTCTGCAAAAGTC------CGGC.......................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................................................................................................TCGTTGGAA---T----GTATGTAACAGGTAGAA....................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................GAAATAACGGTCGAA---ATGGTA..................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................TAACAGGTAGAAGA-AAGCTT...........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CAGGTAGAAGA-AAGCTTTTCC.......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................AAAAGTC------CGGCA-----------T---------------------------GCCAGG.........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AA---T----GTATGTAACAGGTAGAAGA-AAGC.............................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................TCGTTGGAA---T----GTATGTAACAGGTA.......................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TATTTTTGATCA-------GGAT-------------------------------------------------------------------CATTA------------------------------2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TGTAACAGGTAGAAGA-AAGCTT...........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........TTATGAAGGTCTGCAAAAGTC------...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AGCTTTTCCGACCCTATAAAG...........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................TCGTTGGAA---T----GTATGTAACAGGTAG......................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................................................GAGTATCGAAATAACGGTCGA............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................AGTTACT-AGTAGAATT-----------AAA--------------------------GT......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAAAGTC------CGGCA-----------T---------------------------GCCAGGCGCAG....................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TTACT-AGTAGAATT-----------AAA--------------------------GTTT....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TACATATATTTTTGATCA-------GG........................................................................................................2040.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AA---T----GTATGTAACAGGTAGAAG...................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TAGAAGA-AAGCTTTTCCGACCCTA................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................CATATATTTTTGATCA-------GGAT-------------------------------------------------------------------C..................................2130.3310000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TACATATATTTTTGATCA-------GGAT-------------------------------------------------------------------...................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TACATATATTTTTGATCA-------GGA.......................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................GTATGTAACAGGTAGAAGA-A................................................................................................................................................................2090.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................ATGTAACAGGTAGAAGA-AAG..............................................................................................................................................................2090.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000
..................................................................................................................................................................................................................................................................................................TATATTTTTGATCA-------GGAT-------------------------------------------------------------------C..................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TATGTAACAGGTAGAAGA-AAGC.............................................................................................................................................................2260.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................GTATGTAACAGGTAGAAGA-AAGC.............................................................................................................................................................2360.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................ATGTAACAGGTAGAAGA-AAGC.............................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................GTATGTAACAGGTAGAAGA-AAG..............................................................................................................................................................2280.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TATATTTTTGATCA-------GGAT-------------------------------------------------------------------...................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................GTATGTAACAGGTAGAAGA-AAA..............................................................................................................................................................22130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TATGTAACAGGTAGAAGA-AAGT.............................................................................................................................................................22140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................TGTAACAGGTAGAAGA-AAGT.............................................................................................................................................................20160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................ATATATTTTTGATCA-------GGAT-------------------------------------------------------------------CA.................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................GTATGTAACAGGTAGAAG...................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ACGCCCGGCGGTGATGAAGGTCTGCAAAAGTC------CGGCC-----------T---------------------------GCCAGGCGCAGTGTGAGTATCGACCTAATGGTCTCA---TGCCTAATATTGAT-AATAGAATTTATTTATATTTAA--------TATTTTTATAC--CCGTTACTTGAA------GAGTGA-AAGGTTGTACTAGGTTCGTTTAAA---A----GTATGAAACAGGTAGAAGG-AAGCCTTTCTGACCATATTAGAATCACA-----------------------------------AGCCGAGTCGGTCTGGTCATGTCCGTCTGTCCATTCGTCTGTCCATTCGTCTGTCC--A-TCCGCCTGTTCT-------------TCCG-TATGAACTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
GC------TGGTAATGAAGG----CAGAAATC------CGC--------------------------------------------------------------------------TCA---GGCCAAATG--------CAAAATGTTTTAATGTTCAAAATG----TATTTTTATAC--CCGTTACTGGTA------GAGTAA-AAGGGTATACTAGATTCGTTGAAA---A----GTATGTAACAGGCAGAAGG-AAGCGTTTCCGACCATATAAAGTATATATA--------TTCTTGATCA-----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................GCAGAAGG-AAGCGTTTCCGACCATA................................................................................................................................................25206.401280012800000000
............................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGG-AAGCGT...........................................................................................................................................................25200.15300300000000
..........................................................................................................................................................................................TGGTA------GAGTAA-AAGGGTATACTAGATT.....................................................................................................................................................................................................27200.15300300000000
..........................................................................................................................................................................................TGGTA------GAGTAA-AAGGGTATACTAGATC.....................................................................................................................................................................................................27200.05100100000000
..........................................................................................................................................................................................TGGTA------GAGTAA-AAGGGTATACT..........................................................................................................................................................................................................22200.05100100000000
.................................................................................................................................................................................................................................AAA---A----GTATGTAACAGGCAGAAGG-AA...............................................................................................................................................................25200.05100100000000
....................................................................................................................................................................................................................ACTAGATTCGTTGAAA---A----GTATGTAACA...........................................................................................................................................................................27200.05101000000000
........................................................................................................................................................................................................TAA-AAGGGTATACTAGATT.....................................................................................................................................................................................................19200.05101000000000
.....................................................................................................................................................................................................................CTAGATTCGTTGAAA---A----GTATGT...............................................................................................................................................................................22200.05101000000000
droEug1
GT---------------------ACAAAAATT------TGTCA-----------T---------------------------GTGTGACCTGGTTTG-GTATCGATAGGTC-------------------------------------------------------ATTAATTATAC--CAGTTACTCGTA------GAGTAA-AAGGGTATACTAGATTCGTTGAAA---A----GTATGTAACAGGTAGAAGG-AAGCGTTTCCGACCCTATAAAGTATATATA--------TTCTTGATCA-----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TG--------------AAAATATGTGAATACCTTTTGACAGCA-----------T---------------------------ACCAGATAATATGGGAATA----ACTAACTTTAAAA---ATAATATA---------------T-----------AT--------GATTTTTATAC--CCCTTAGTCGTA------GAGTAA-AAGGGTATACTAGATTCGTCGGAA---A----GTATGTAACAGGTGG-AGG-AAGCGTTTCCGACCCCATAAAGTATAAATG--------T--------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TA-CCCA--------------------------------------------------------------------------------GCGAAAAGGGGTAATAAAAGTGACGATAAGA---ATTGTATTATTT--------------------TT------GTATCATTATTTATAC--CCGTTACTCGTA------GAGTAA-AAGGGTATATTGTATTCGTGCAAA---A----GTATGTAACAGGGAGAAGG-ACGCGTTTCCGACCCCATAAAGTATATATA--------TTCTTGATCA-------GGATCACTAG-----------------------------------------------------C-----AGAGTCGATCTA-------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CG--------------------------------------GTA-----------T---------------------------GATATCTTCAGTGTGTATTCCTAAATAAAAGTAAATTAAATTTGAGATTTA-T-CGATGATTT-----------AAAGAA----TATAATTATAA--TCGTTT---------------------------CTCGTATTAGTTGAAA---A----GTATTTAACAGGTAGAAGG-AAGCGTTTCCGACCATATAATGTATATATT--------TGTTTGATCA-----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GG-A------------------------------------------------------------------------------------------------------ATAACGGG-----------T------A-----TAAAA-------ATATTTA----------ATTTTTGTTCGAAGAGTAGTTATC------AAGTAA-AAGGGTATATTGTATTCGTGCAAA---A----GTATGTAACAGGTAGAAGG-AAGCGTTTCCGACCCTATAAGGTATATATA--------TTCTTTTTCA-------GGATCACTAG------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------GAGTAAATGGGGTATTCTGTATTTGTTGAAA---A----GTATGTAACAGGTCGAAGAAAAACACTTCCAACCCCTTAAGATATATGTA----TGTAAACTTGTATA-------------TT-------------------------------------------------------A-----ATGGTCATCAC-------------AAAT-CATAAAAASizeHit CountTotal NormTotal
No Reads
droKik1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAACGCACTGAAGG-AGACATTTCTGACCCTATGAAGTATGTATA----TATATTCTTGATCA-------GC--CACTAA-----------------------------------------------------ATTATTATTATTA--------------------T-TATTAATASizeHit CountTotal NormTotal
No Reads
droAna3
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------GAGTAT-AAGGGTATTTTCTATTCGTGCGAG---G----GTA-GTAACAGGGGGAAGG-AATCATCTCTGACCCCATAAAGTATACATA--------TTCTTGATTA-------GTA------T-----------------------------------------------------A-----TTATATATCCATATCCATCTGTGGATAT-CAGAGAATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AA-AA-------------A--------------------------------------------------------------------A--------------CG-------AATAAAA---CTTTTAAAATGACAAAATCGAATT-----------AA------------TTTTTAC--CCGGTACTCGTA------GAGTAC-AAGGGTATATTGAATTCGTATGAA---T----GTATATAACCGAGAGAAGG-AATCATCTCCCACCCCATAAAGTATATATA----AATAT-------CAGGGCTATGC--ATATAT-----------------------------------------------------AATAAAACCACTATTC---------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AG-GCGG--------------------------------------------------------------------------------AGCTTGAGCGGTA------A------TAAAA---GAGATAGAGC-----------------------------------TATTTTTATAC--CCGATACTCAAA----ATGAGTAT-TGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTTCAGAAGG-AATCGTTTCCGACCCCATAAAGTATATATA--------TTCTTGATCA-----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGTG................................................................................................................................................................................232061.3012260000000012260
..........................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGT.................................................................................................................................................................................22201.653300003300000
..........................................................................................................................................................................................................................TTTGTGGTAAAAGTGGAT.....................................................................................................................................................................................18201.452902900000000
.........................................................................................................................GAGATAGAGC-----------------------------------TATTTTTATAC--CCGATA........................................................................................................................................................................................................................................2711.0010100000000
..........................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGTGTAA.............................................................................................................................................................................26200.901800000018000
..............................................................................................................................................................................................................................TGGTAAAAGTGGATGTGTG................................................................................................................................................................................19200.901800000000180
..................................................................................................................................................................................................................................................................TCGTTTCCGACCCCATAAAGTATATA.....................................................................................................................................26200.901801440000000
...........................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTGTGTAACG...........................................................................................................................................................................27200.651301300000000
............................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTGTGT...............................................................................................................................................................................22200.501000000010000
............................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTGTGTA..............................................................................................................................................................................23200.4590000009000
...................................................................................................................................................................................................................TATTAGATTTGTGGTAAAAGT.........................................................................................................................................................................................21200.4590000008100
...................................................................................................................................................................................................................TATTAGATTTGTGGTAAAAGTGGA......................................................................................................................................................................................24200.3570000000700
..........................................................................................................................................................................................TCAAA----ATGAGTAT-TGGGGTATATT..........................................................................................................................................................................................................24200.3060600000000
..................................................................................................................................................................................................................................AAAAGTGGATGTGTGTAACG...........................................................................................................................................................................20200.3060000006000
.......................................................................................................................................................................................................................AGATTTGTGGTAAAAGTGG.......................................................................................................................................................................................19200.3060600000000
.....................................................................................................................................................................................................................................AGTGGATGTGTGTAACGTT.........................................................................................................................................................................1990.2220000011000
...................................................................................................................................................................................................ATGAGTAT-TGGGGTATATTAGATT.....................................................................................................................................................................................................24200.2040400000000
...........................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTG..................................................................................................................................................................................20200.2040000000040
................................................................................................................................................................................................................................GTAAAAGTGGATGTGTGTAAC............................................................................................................................................................................21200.2040000004000
...........................................................................................................................................................................................CAAA----ATGAGTAT-TGGGGTATA............................................................................................................................................................................................................21200.2040400000000
.........................................................................................CTTGAGCGGTA------A------TAAAA---GAGATAGA................................................................................................................................................................................................................................................................................................2560.1710000001000
......................................................................................................................................................................................................................TAGATTTGTGGTAAAAGTGGA......................................................................................................................................................................................21200.1530000000003
..........................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATG....................................................................................................................................................................................19200.1530030000000
..................................................................................................................................................................................................................................AAAAGTGGATGTGTGTAACGTT.........................................................................................................................................................................2270.1410000010000
...........................................................................................TGAGCGGTA------A------TAAAA---GAGATAGAG...............................................................................................................................................................................................................................................................................................2490.1110100000000
..................................................................................................................................................................................................................................................................TCGTTTCCGACCCCATAAAGTATATATA--------...........................................................................................................................28200.1020200000000
..........................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGA.................................................................................................................................................................................22200.1020000200000
......................................................................................................................................................................................................................TAGATTTGTGGTAAAAGTG........................................................................................................................................................................................19200.1020200000000
............................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTGTGTAAC............................................................................................................................................................................25200.1020000002000
...................................................................................................................................................................................................................................................ACGTTCAGAAGG-AATCGTTTC........................................................................................................................................................21100.1010001000000
........................................................................................................................................................................................ACTCAAA----ATGAGTAT-TGGG.................................................................................................................................................................................................................19200.1020200000000
............................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTGA.................................................................................................................................................................................20200.1020200000000
........................................................................................................................................................................................................TAT-TGGGGTATATTAGATTTGTGG................................................................................................................................................................................................24200.1020200000000
..............................................................................................................................................................................................................................TGGTAAAAGTGGATGTGTGTAACG...........................................................................................................................................................................24200.1020000000020
.........................................................................................................................................................................................CTCAAA----ATGAGTAT-TGGGGTATA............................................................................................................................................................................................................23200.1020200000000
..........................................................................................................................................................................................................................................................GAAGG-AATCGTTTCCGACC...................................................................................................................................................19200.1020020000000
..........................................................................................................................................................................................................................................ATGTGTGTAACGTTCAGAAGG-AAT..............................................................................................................................................................24120.0810100000000
...........................................................................................................................................................................................................................................TGTGTGTAACGTTCAGAAGG-AAT..............................................................................................................................................................23130.0810100000000
..........................................................................................................................................................................................................................................ATGTGTGTAACGTTCAGAAGG-.................................................................................................................................................................21150.0710100000000
..........................................................................................................................................................................................................................................ATGTGTGTAACGTTCAGAAGG-AA...............................................................................................................................................................23150.0710100000000
............................................................................................................................................................................................................................................GTGTGTAACGTTCAGAAGG-AA...............................................................................................................................................................21160.0610100000000
............................................................................................................................................................................................................................................GTGTGTAACGTTCAGAAGG-A................................................................................................................................................................20160.0610100000000
...........................................................................................................................................................................................................................................TGTGTGTAACGTTCAGAAGG-A................................................................................................................................................................21160.0610000001000
............................................................................................................................................................................................................................................GTGTGTAACGTTCAGAAGG-.................................................................................................................................................................19160.0610000010000
.........................................................................................................................................................................TTTTATAC--CCGATACTCAAA----ATGA..........................................................................................................................................................................................................................24200.0510100000000
...........................................................................................................................................................................................CAAA----ATGAGTAT-TGGGGTATATTA.........................................................................................................................................................................................................24200.0510000100000
..........................................................................................................................................................................................TCAAA----ATGAGTAT-TGGGGT...............................................................................................................................................................................................................19200.0511000000000
.......................................................................................................................................................................................................GTAT-TGGGGTATATTAGATTTGTGGTA..............................................................................................................................................................................................27200.0510100000000
......................................................................................................................................................................................................................................................................TTCCGACCCCATAAAGTATATATA--------TTC........................................................................................................................27200.0510000000100
.................................................................................................................................................................................................................................TAAAAGTGGATGTGTGTAACGT..........................................................................................................................................................................22200.0510000001000
.............................................................................................................................................................................................................................GTGGTAAAAGTGGATGTG..................................................................................................................................................................................18200.0510100000000
....................................................................................................................................................................................................TGAGTAT-TGGGGTATATTA.........................................................................................................................................................................................................19200.0510100000000
...........................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTGTGTAA.............................................................................................................................................................................25200.0510000000100
droPer2
CG-CCCGCCAGCTATGCTAGTCTG---GCGAT------CAACTTATTAAGCACTTTCCATTAGCTGTATGTCGGCAATATTTGTGAAAGCT---------------------------------------TGATT-GACAAGAAT-----------AA--------GGTTTTTATAC--CCGATACTCAAA----ATGAGTAT-TGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGG-AATCGTTTCCGACCCTATAAAGTATATATA--------TTCTTGATCA-----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................TTAGATTTGTGGTAAAAGTG........................................................................................................................................................................................20200.153030000
...............................................................................................................................................................................................................GGTATATTAGATTTGTGGTAAAAG..........................................................................................................................................................................................24200.102020000
.......................................................................................................................................................................................TACTCAAA----ATGAGTAT-TGG..................................................................................................................................................................................................................19200.102020000
...................................................................................................................................................................................................................TATTAGATTTGTGGTAAAAGT.........................................................................................................................................................................................21200.102002000
droWil2
GT-A---------A----------------------------------------------------------------------------------------CGAAAATTCGCTATAA---GTGGT------ATT-GAAGAAATT-----------T----------ATTTTTATCC--C-------CATA------GGGTGA-AATGGTATATTAAAGTCTTAAAAA---T----GTATGTAACAGACAGAAGG-AAGCTTTTTCGACCCCATAAGGTATATATG----TATATTCTTCATCA-------GAAT------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................T----GTATGTAACAGACAGAAGG-AAGCTTT..........................................................................................................................................................2780.50400040
.......................................................................................................................................................................................................................................T----GTATGTAACAGACAGAAGG-AAGCTT...........................................................................................................................................................26180.39700070
.......................................................................................................................................................................................................................................T----GTATGTAACAGACAGAAGG-AAGCT............................................................................................................................................................25190.16300120
.............................................................................................................................................................................................................................................TATGTAACAGACAGAAGG-AAGCTTTT.........................................................................................................................................................2680.13100010
.................................................................................................................................................................................................................................................TAACAGACAGAAGG-AAGCTTT..........................................................................................................................................................21110.09101000
..................................................................................................................................................................................................................................................AACAGACAGAAGG-AAGCTTTT.........................................................................................................................................................21110.09100010
.............................................................................................................................................................................................TA------GGGTGA-AATGGTATATTAAAGT.....................................................................................................................................................................................................24200.05100100
..............................................................................................................................................................................................................................................ATGTAACAGACAGAAGG-AAGCTT...........................................................................................................................................................23200.05100010
..............................................................................................................................................................................................................................................ATGTAACAGACAGAAGG-AAGC.............................................................................................................................................................21200.05100100
droVir3
AG-T---------ATCAGAATCTGTAAAAA--------------------------------------------------------------------------------------CA---TTGGT------------------------------AC--------GGTTATTATAC--CCTGAACCCATTAAAAATGGGTAT-AAGAGCATAATTTATTTGTGCAAAGTACAAATGTATGTAACAGGCAGAAGG-AAGCATCTCCGACCCCATAAAGTATAAATA--------T--------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................TATGTAACAGGCAGAAGG-AAGCATC..........................................................................................................................................................25200.8517009000008000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGG-AAGCATC..........................................................................................................................................................26200.65130000000000000000000000000001300000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GAAGG-AAGCATCTCCGACCCC.................................................................................................................................................21200.204000000000000000000000000000000000000000000000000000000000000004
.............................................................................................................................................................................................................................................TATGTAACAGGCAGAAGG-AAGCATCTC........................................................................................................................................................27200.153000000000000000000000000000020000000000000000000000000000000010
.............................................................................................................................................................................................TTAAAAATGGGTAT-AAGA.................................................................................................................................................................................................................18200.153000000000000000000000000000020010000000000000000000000000000000
..........................................................................................................................................................................................................................................ATGTATGTAACAGGCAGAAGG-AAGC.............................................................................................................................................................25200.102000000000000000000000000000020000000000000000000000000000000000
.......................................................................................................................................................................................................................................CAAATGTATGTAACAGGCAGAAGG-.................................................................................................................................................................24200.102000002000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GCAGAAGG-AAGCATCTCCG......................................................................................................................................................19200.102000000000000000000000000000000000200000000000000000000000000000
...........................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGG-AAGCATC..........................................................................................................................................................27200.102000000000000000000000000000200000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AAGG-AAGCATCTCCGACCCCA................................................................................................................................................21200.102002000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................ATAC--CCTGAACCCATTAAAAATGGGT........................................................................................................................................................................................................................26200.102002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................ATCTCCGACCCCATAAAGTATAAAT....................................................................................................................................25150.071000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................TACAAATGTATGTAACAGGCAGAAGG-A................................................................................................................................................................27180.061000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................CTGAACCCATTAAAAATGGGTAT-AAGAG................................................................................................................................................................................................................28200.051000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................GCAGAAGG-AAGCATCTCCGACC...................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................GGCAGAAGG-AAGCATCTCC.......................................................................................................................................................19200.051000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................ACAGGCAGAAGG-AAGCATCTC........................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................AGAAGG-AAGCATCTCCGACC...................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................TATGTAACAGGCAGAAGG-AAGC.............................................................................................................................................................22200.051000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................AGGCAGAAGG-AAGCATCTCCGACC...................................................................................................................................................24200.051000000000100000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GG-AAGCATCTCCGACCCCATA..............................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GAAGG-AAGCATCTCCGACC...................................................................................................................................................19200.051000001000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GCAGAAGG-AAGCATCTCCGAC....................................................................................................................................................21200.051000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CAGAAGG-AAGCATCTCCGAC....................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................ATGTAACAGGCAGAAGG-AAGCATCTC........................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................ATGTAACAGGCAGAAGG-AAGCATC..........................................................................................................................................................24200.051000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CAAATGTATGTAACAGGCAGAAG...................................................................................................................................................................23200.051000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................TCTCCGACCCCATAAAGTATA.......................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................GTAACAGGCAGAAGG-AAGC.............................................................................................................................................................19200.051000100000000000000000000000000000000000000000000000000000000000
droMoj3
CA----------------------------------------------------T---------------------------TCCATGCACAGTGTGCATATTA-ATTATTGCCAAAC---GTAAT------------------------------AA--------GATTATTATAC--CCTGAACCCATTGAAAATGGGAAATCAGGGTATAATGGTTTTGTG-AAA---A----GTATGTAACAGGCAGAAGG-AATCATCGCAGACCCCATAAAGTATATATA--------TTCTTGATCA-----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................TGGGAAATCAGGGTATAATGGTT......................................................................................................................................................................................................23200.50100100000
...........................................................................................................................................................................................................................................................................ACCCCATAAAGTATATATA--------TTC........................................................................................................................22200.102200000
...........................................................................................................................................................................................................................................................................ACCCCATAAAGTATATATA--------TTCT.......................................................................................................................23200.102000020
.......................................................................................................................................................................ATTATTATAC--CCTGAACCCAT...................................................................................................................................................................................................................................21200.102100010
..............................................................................................................................................................................................................................TG-AAA---A----GTATGTAACAGGCAGAAG...................................................................................................................................................................24200.102200000
......................................................................................................................................................................GATTATTATAC--CCTGAACCCA....................................................................................................................................................................................................................................21200.051100000
...................................................................................................................................................................................................................................A---A----GTATGTAACAGGCAGAAGG-AATC.............................................................................................................................................................25200.051000010
..............................................................................................................................................................................................................................................................................CCATAAAGTATATATA--------TTCTTGATC..................................................................................................................25200.051000010
...........................................................................................................................................................................................................................TTGTG-AAA---A----GTATGTAACAGGCAGAAG...................................................................................................................................................................27200.051000001
..........................................................................................................................................................................................................ATCAGGGTATAATGGTTTTGT..................................................................................................................................................................................................21200.051000001
..................................................................................................................................................................................................................................................................TCATCGCAGACCCCATAAAGTATATATA--------...........................................................................................................................28200.051100000
........................................................................................................................................................................................................................................................CAGAAGG-AATCATCGCAGACC...................................................................................................................................................21200.051100000
.............................................................................................................................................................................................TTGAAAATGGGAAATCAGGGT...............................................................................................................................................................................................................21200.051000010
.............................................................................................................................................................................................................................................TATGTAACAGGCAGAAGG-AATCATCG.........................................................................................................................................................26200.051100000
..................................................................................................................................................................................................................ATAATGGTTTTGTG-AAA---A----GT...................................................................................................................................................................................20200.051001000
.................................................................................................................................................................................................................................................................................TAAAGTATATATA--------TTCTTGATCA-----------------------------------------------------------------------------------------------------------------23200.051100000
........................................................................................................................................................................TTATTATAC--CCTGAACCCATTG.................................................................................................................................................................................................................................22200.051000010
..............................................................................................................................................................................................TGAAAATGGGAAATCAGGGTATA............................................................................................................................................................................................................23200.051000001
droGri2
AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAGTATA-TACATTTATTAAAAACATATTCGTATGTAACAGGCAGAAGA-AAGCATCTCCGGCTCCAGAAGATATCTATA--TGTATATTCTTGAACG-------TG-------------------------------------------------------------A-----ACAATTGTCGCGTTG----------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 06:10 PM