dsi_18067

ATCTTCAGCACCATAGCGAACATTTTTGCTGGCATTGCTCAGTACCAAAAGTAGGTCATATGAAATAATCCAAAGGATATACTAACAATTTATTATTTACCCATAGACCAGAGAAATATGATATACCCACCTACTGCTCGATTCTGCGAGAGTTCA ************************************************...(((.(((..((((.((((...)))).........))))..)))..))).....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M024 male body	SRR553488 RT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries
.................GAACATTTTTGCTGGCATTGCTCA...................................................................................................................	24	0	1	1.00	1	1	0	0
.............................TGGCATTGCCGAGTACCTAA...........................................................................................................	20	3	4	0.25	1	0	1	0
.......................................................................AAAGGATATACTGAC......................................................................	15	1	17	0.06	1	0	0	1

TAGAAGTCGTGGTATCGCTTGTAAAAACGACCGTAACGAGTCATGGTTTTCATCCAGTATACTTTATTAGGTTTCCTATATGATTGTTAAATAATAAATGGGTATCTGGTCTCTTTATACTATATGGGTGGATGACGAGCTAAGACGCTCTCAAGT ************************************************...(((.(((..((((.((((...)))).........))))..)))..))).....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553488 RT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries	SRR902008 ovaries	SRR618934 dsim w501 ovaries
.................................................................................................................................GGATGACGAGATAGGGCGC........	19	3	3	0.33	1	1	0	0	0
............................................................................................AAAAAATGGGGATCTGGT..............................................	18	2	6	0.17	1	1	0	0	0
...................................TCGAGTCATGGTTGTCA........................................................................................................	17	2	8	0.13	1	1	0	0	0
......................................AGTCATAGTTTTCGTCCAGA..................................................................................................	20	3	8	0.13	1	1	0	0	0
..............TCACTTGTAAAAACG...............................................................................................................................	15	1	20	0.10	2	0	2	0	0
...................................................................................................GGCTTTCTGGTCTCTCTATA.....................................	20	3	12	0.08	1	0	0	1	0
.......................................................................................................................................CGAGCTAGGAAGCTCTCT...	18	3	20	0.05	1	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	3r:6039191-6039346 -	dsi_18067	ATCTTCAGCACCATAGCGAACATTTTTGCTGGCATTGCTCAGTACCAAAAGTAGGTCATATG-AA-----ATAATCCAAAGG-------------ATAT----------ACTAACAATT--T-----ATT----ATTTACCCATAGACCAGAGAAATATGATATACCCACCTACTGCTCGATTCTGCGAGAGTTCA
droSec2	scaffold_25:548326-548481 -		ATCTTCAGCACCATAGCGAACATTTTTGCTGGCATTGCTCAGTACCAAAAGTAAGTCATATG-AA-----ATACCCAAGAGA-------------ATGT----------ACTACCAATT--T-----ATT----ATTTACCCATAGACCAGAAAAATATGATATACCCACCTACTGCTCGATTCTGCGAGAGTTCA
dm3	chr3R:15220044-15220198 +		ATCTTCAGCACTATTGCAAACATTTTTGCTGGCATTGCTCAGTACCAAAAGTAGGTGATTTG-AA-----AGGACCAAAACG-------------ATGT----------ACTAACA-TT--C-----ATT----ATTTACCCATAGACCAGAGAAATATGATATACCCACCTACTGCTCGATCCTGAGAGAGTTCA
droEre2	scaffold_4770:6414295-6414451 -		ATCTTCAGCACTATAGCGAACCTTTTTGCTGGCATTGCGCAGTACCAAAAGTAGGTGATATG-AA-----ACAGCCAACAATT------------CATT----------ACCAACAATT--C-----ATT----ATTTACCCATAGACCGGAGAAATATGATATTCCCAAGTACTGCTCGATTCTGCGCGAGTTCA
droYak3	3R:3944680-3944835 +		ATCTTCAGCACTATAGCGAACATTTTTGCTGGCATTGCTCAGTACCAAAAGTAGGTGATACG-AA-----ACAAACTAATGG-------------ATGT----------ATTAATAATT--C-----ATT----ATTTACCCATAGACCGGAGAAATATGATATTCCCACCTACTGCTCCATTCTGCGAGAGTTCA
droEug1	scf7180000409804:1495531-1495688 +		ATCTTCAGCACTATTGCCAACATTTTCGCTGGCATTGCTCAGTACCAAAAGTAGGTGGCACA-TA----------TAAA-----AATTATAAAA-ACTA----------AGTTATAATA--T-----AAT----ATTTCCCAACAGGCCCGAGAAATATGACATTCCCACATACTGCTCTATTTTGCGAGAGTTTA
droBia1	scf7180000302402:987821-987976 +		ATATTCAGCACCATTGCCAACATTTTCGCCGGCATTGCTCAGTACCAAAAGTAGACATTAAA-AA-----AAAGTCTTAAGG-------------AGTA----------AGTTATAACA--T-----TGT----TTTATCCCATAGGCCAGAGAATTACGACATTCCCAAGTACTGCTCGATTCTTCGAGAATTCA
droTak1	scf7180000410451:253071-253227 +		ATCTTTAGCACCATTGCCAACATTTTCGCCGGCATTGCTCAGTACCAAAAGTAGGCGATTCA-AA-----AAAAACTGGAAGA------------TCTT----------GATAATAATA--C-----ATT----ATTTTCCCATAGGCCAGAGAACTACGACATTCCCAAGTACTGCTCCATTCTGCGAGAATTCA
droEle1	scf7180000490994:1011198-1011356 +		ATATTCAGCACCATTGCCAACGTTTTCGCCGGCATTGCTCAGTACCAAAAGTAGGTGGCATT-AA-----ACAACCATAGAG-------------ATAT----------AATGATAATT--C-----AATATT-TGTTTTTCATAGGCCAGAAAATTATGACATTCCCAAATATTGCTCAATTTTGCGAGAGTTCA
droRho1	scf7180000760408:3464-3620 -		ATCTTCAGCACCATTGCGAACATTTTCGCCGGCATTGCTCAGTACCAAAAGTAGGTGGCATT-GA-----ACAACCATACAGA------------ATTT----------AGTGATAATT--T-----AAT----TGTTTCCCCTAGGCCGGAGAACTATGACATTCCAAAATATTGCTCTATTTTGCGAGAGTTCA
droFic1	scf7180000454126:211242-211397 +		ATATTCAGCACTATTGCCAATATTTTTGCCGGCATTGCTCAATACCAAAAGTAAGTGGTACG-AA-----CCAACCAAACGA-------------ACTT----------ATTTTGATTT--A-----AAA----TGTTCTCTTTAGGCCAGAAAACTACGACATTCCCAAGTACTGTTCTATTCTGCGAGAGTTTA
droKik1	scf7180000302707:449610-449765 +		ATATTCAGCACCATTGCCAATATCTTCGCCGGCATTGCCCAATACCAAAAGTGGGACTCTTA-AC-----ATT--AACA-----GATTATTGGG--AAT----------ATTTATTACC--C-----A--------TTATTTCTAGGCCTGAGAAGTACGACCTGCCCCAGTACTGTTCGGTGCTGCGATCCTTCA
droAna3	scaffold_13340:15168904-15169062 -		ATATTCAGCACTATTGCCAACATTTTTGCAGGAATTGCCCAATACCAAATGTAAGTAGCACT-CC-----CCACCATACAGA-------------AACT-------GTTATTTCTAATT--T-----AAT----TACATTCCAAAGTCCAGCGAATTATGACATTCCCAAGCAATGCTCGGTGCTGAGGTCCTTCA
droBip1	scf7180000396708:4864877-4865033 +		ATATTCAGCACCATTGCCAATATTTTCGCCGGAATCGCTCAATACCAAAAGTAAGTAGCTCT-GTTGTAGACAACCAACA------------------A----ACTTTTATTTGT------------ACG----ATTATCTTGTAGTCCAGCGAATTATGACATCGCCCAGTACTGCTCGGTGCTGAGGAGCTTCA
dp5	Unknown_singleton_832:2731-2895 +		ATTTTCAGCACCATAGCCAATGTATTCGCAGGACTGGCACAGTACCAAAAGTAGGTACAAAAGGT---------ACA-A-----GGATCTAAGGAGTGCAGTAA-----A-----T--TTATATAGAAGC----CTTTCCCTTTAGACCTGGAAACTATGATCTGCCCAAGTACTGTTCGGTGCTGCGTTCCTTCA
droPer2	scaffold_6:5053770-5053934 +		ATTTTCAGCACCATAGCCAATGTATTCGCAGGACTGGCACAGTACCAAAAGTAGGTACAAAAGGT---------ACA-A-----GGATCTAAGGAGTGCAGTAA-----A-----T--TTATATAGAAGC----CTTTCCCTTTAGACCTGGAAACTATGATCTGCCCAAGTACTGCTCGGTGCTGCGTTCCTTCA
droWil2	scf2_1100000004943:4007527-4007689 +		ATCTTTAGTACAATAGCAAATGTCTTTGCTGACATCGCTCAATATCAAAAGTAAGTAGAATC-AA-----AAA--------GATGGTGATAAGA-AACA----------ACTAACAATT--T-----T-CACGTACTCTTCTTAAGACCCGACAACTACGACTTGCCCAAATATTGCTCAGTTCTGAGAAGCTTCA
droVir3	scaffold_13047:16406575-16406733 -		ATATTCAGCACGATTGCAAATGTTTTTGCCGGCATTGCCCAGTACCAAAAGTAACAAAAA---AA-----ACATTCAAA-----ATATTTGC---TTGCT----------ATATCATTA--T-----GTT----CTTTCTACTTAGACCCGAAAACTACGACTTGGCCCAATATTGCTCCGTTCTTCGTAGCTTTG
droMoj3	scaffold_6540:12707062-12707220 +		ATATTTAGCTTGATTGCAAACATATTTGCAGGCATAGCGCAGTACCAAAAGTAACTATG----GC-----ACAAGCAACA-----TCTTT-CT--TCTT-------C--TTCTATATGA--T-----TTT----GTTTCTTTGTAGACCAGAAAACTATGATTTGGCCCGATCTTGCTCCGTTCTGCGAAACTTGG
droGri2	scaffold_15116:1329444-1329600 -		ATTTTTAGCACAATTGCAAACATTTTGGCAGGCCTCGCCCAGTACCAAAAGTAATTAT---G-CA-----ACGCCCCCA-----ATTTACGA---AAGCT----------A-CATGTGT--T-----TTT----ACTTCAATACAGCCCGGCAAACTATGACTTGGCCAAACATTGCTCAGTGCTTCGATCCTTTA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

ATCTTCAGCACCATAGCGAACATTTTTGCTGGCATTGCTCAGTACCAAAAGTAGGTCATATG-AA-----ATAATCCAAAGG-------------ATAT----------ACTAACAATT--T-----ATT----ATTTACCCATAGACCAGAGAAATATGATATACCCACCTACTGCTCGATTCTGCGAGAGTTCA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.................GAACATTTTTGCTGGCATTGCTCA...........................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

ATCTTCAGCACCATAGCGAACATTTTTGCTGGCATTGCTCAGTACCAAAAGTAAGTCATATG-AA-----ATACCCAAGAGA-------------ATGT----------ACTACCAATT--T-----ATT----ATTTACCCATAGACCAGAAAAATATGATATACCCACCTACTGCTCGATTCTGCGAGAGTTCA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.....................ATTTTTGCTGGCATTGCTCA...........................................................................................................................................................	20	1	11.00	11	0	11	0	0
.............................................................................................................................................................ATGATATACCCACCTACTGCTCG................	23	1	4.00	4	0	4	0	0
.................GAACATTTTTGCTGGCATTGCTCA...........................................................................................................................................................	24	1	3.00	3	1	2	0	0
..........................................................................................................................................................AATATGATATACCCACCTACTGCTCG................	26	1	3.00	3	0	3	0	0
..................AACATTTTTGCTGGCATTGCTCA...........................................................................................................................................................	23	1	3.00	3	1	2	0	0
.................GAACATTTTTGCTGGCATTG...............................................................................................................................................................	20	1	2.00	2	1	1	0	0
...........................................................................................................................................................ATATGATATACCCACCTACTGCTCG................	25	1	2.00	2	0	2	0	0
........CACCATAGCGAACATTTTTG........................................................................................................................................................................	20	1	1.00	1	1	0	0	0
...........CATAGCGAACATTTTTGCTGGCATT................................................................................................................................................................	25	1	1.00	1	1	0	0	0
....................................................................................................................................................................ACCCACCTACTGCTCGATTCTGCGA.......	25	1	1.00	1	1	0	0	0
...........................................................................................................................................................ATATGATATACCCACCTACTGCT..................	23	1	1.00	1	0	1	0	0
...............................GCATTGCTCAGTACCAAA...................................................................................................................................................	18	1	1.00	1	1	0	0	0
................................................................................................................................................................ATATACCCACCTACTGCTCG................	20	1	1.00	1	0	1	0	0
.....................ATTTTTGCTGGCATTGCTCAGT.........................................................................................................................................................	22	1	1.00	1	0	1	0	0
.....CAGCACCATAGCGAACATTTTTGCT......................................................................................................................................................................	25	1	1.00	1	1	0	0	0
....................CATTTTTGCTGGCATTGCTCA...........................................................................................................................................................	21	1	1.00	1	0	1	0	0
........................................................................................................................................................AAAATATGATATACCCACCTACTGCTCG................	28	1	1.00	1	0	1	0	0
......................................................................................................................................................................CCACCTACTGCTCGATTCTGCGA.......	23	1	1.00	1	1	0	0	0
ATCTTCAGCACCATAGCGAAC...............................................................................................................................................................................	21	1	1.00	1	1	0	0	0
.................GAACATTTTTGCTGGCATTGCTC............................................................................................................................................................	23	1	1.00	1	0	1	0	0
............................................................................................................................................................................ACTGCTCGATTCTGCGAGA.....	19	1	1.00	1	1	0	0	0
.......................TTTTGCTGGCATTGCTCAGT.........................................................................................................................................................	20	1	1.00	1	0	1	0	0
........................................................................................................................................................AAAATATGATATACCCACCTACTGCT..................	26	1	1.00	1	1	0	0	0

dm3

ATCTTCAGCACTATTGCAAACATTTTTGCTGGCATTGCTCAGTACCAAAAGTAGGTGATTTG-AA-----AGGACCAAAACG-------------ATGT----------ACTAACA-TT--C-----ATT----ATTTACCCATAGACCAGAGAAATATGATATACCCACCTACTGCTCGATCCTGAGAGAGTTCA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.....................ATTTTTGCTGGCATTGCTC............................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................ACCCACCTACTGCTCGATCCTGA.........	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.........................................................................................................................................................................CCTACTGCTCGATCCTGAGAGAGT...	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................GATTTG-AA-----AGGACCAAAACG-------------AT...................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................GCTCGATCCTGAGAGAGTTC.	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................ACTGCTCGATCCTGAGAGAGTT..	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

ATCTTCAGCACTATAGCGAACCTTTTTGCTGGCATTGCGCAGTACCAAAAGTAGGTGATATG-AA-----ACAGCCAACAATT------------CATT----------ACCAACAATT--C-----ATT----ATTTACCCATAGACCGGAGAAATATGATATTCCCAAGTACTGCTCGATTCTGCGCGAGTTCA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.................GAACCTTTTTGCTGGCATTGCGC............................................................................................................................................................	23	1	42.00	42	1	0	2	0	32	7	0
.................GAACCTTTTTGCTGGCATTGCGCA...........................................................................................................................................................	24	1	36.00	36	1	0	5	0	26	4	0
...........................................................................................................................................................ATATGATATTCCCAAGTACTGCTCGAT..............	27	1	23.00	23	1	0	0	0	21	1	0
..................AACCTTTTTGCTGGCATTGCGCA...........................................................................................................................................................	23	1	22.00	22	1	0	0	0	21	0	0
..................AACCTTTTTGCTGGCATTGCGC............................................................................................................................................................	22	1	21.00	21	1	0	0	0	18	2	0
..................AACCTTTTTGCTGGCATTGCGCAGT.........................................................................................................................................................	25	1	18.00	18	2	0	0	0	15	1	0
.................GAACCTTTTTGCTGGCATTGCGCAGT.........................................................................................................................................................	26	1	17.00	17	1	0	0	0	13	3	0
...................ACCTTTTTGCTGGCATTGCGCA...........................................................................................................................................................	22	1	16.00	16	1	0	0	0	12	3	0
...........................................................................................................................................................ATATGATATTCCCAAGTACTGCTC.................	24	1	15.00	15	1	0	0	0	13	1	0
............ATAGCGAACCTTTTTGCTGGCATTGCGC............................................................................................................................................................	28	1	14.00	14	1	0	1	0	11	1	0
...........................................................................................................................................................ATATGATATTCCCAAGTACTGCTCGATT.............	28	1	12.00	12	0	0	0	0	12	0	0
..................................................................................................................................................................ATTCCCAAGTACTGCTCGAT..............	20	1	10.00	10	1	0	0	0	8	1	0
...................ACCTTTTTGCTGGCATTGCGC............................................................................................................................................................	21	1	9.00	9	0	0	1	0	6	2	0
.............................................................................................................................................................ATGATATTCCCAAGTACTGCTCGAT..............	25	1	8.00	8	0	0	0	0	7	1	0
..................................................................................................................................................................ATTCCCAAGTACTGCTCGATTCTGCGC.......	27	1	8.00	8	1	0	0	0	7	0	0
..........................................................................................................................................................AATATGATATTCCCAAGTACTGCTC.................	25	1	7.00	7	1	0	0	0	5	1	0
............ATAGCGAACCTTTTTGCTGGC...................................................................................................................................................................	21	1	7.00	7	7	0	0	0	0	0	0
...................ACCTTTTTGCTGGCATTGCGCAGT.........................................................................................................................................................	24	1	7.00	7	0	0	0	0	7	0	0
.....................CTTTTTGCTGGCATTGCGCA...........................................................................................................................................................	20	1	7.00	7	1	0	1	0	4	1	0
..........................................................................................................................................................AATATGATATTCCCAAGTACTGCTCGAT..............	28	1	7.00	7	0	0	0	0	7	0	0
............................................................................................................................................................TATGATATTCCCAAGTACTGCTCGAT..............	26	1	5.00	5	0	0	0	0	5	0	0
............................................................................................................................................................................ACTGCTCGATTCTGCGCGA.....	19	1	5.00	5	0	0	0	0	3	2	0
..................................................................................................................................................................ATTCCCAAGTACTGCTCGATT.............	21	1	5.00	5	1	0	0	0	4	0	0
.............................................................................................................................................................ATGATATTCCCAAGTACTGCTC.................	22	1	4.00	4	0	0	0	0	3	1	0
..........CTATAGCGAACCTTTTTGCTGGC...................................................................................................................................................................	23	1	4.00	4	3	0	0	0	1	0	0
....................................................................................................................................................................TCCCAAGTACTGCTCGATTCTGCGC.......	25	1	4.00	4	0	0	1	0	3	0	0
.......................................................................................................................................................AGAAATATGATATTCCCAAGT........................	21	1	3.00	3	0	0	0	0	1	2	0
.............................................................................................................................................................ATGATATTCCCAAGTACTGCTCGA...............	24	1	3.00	3	0	0	0	0	3	0	0
.....................CTTTTTGCTGGCATTGCGC............................................................................................................................................................	19	1	3.00	3	0	0	0	0	0	3	0
..........................................................................................................................................................................GTACTGCTCGATTCTGCGCGA.....	21	1	3.00	3	1	0	0	0	2	0	0
....................CCTTTTTGCTGGCATTGCGC............................................................................................................................................................	20	1	3.00	3	0	0	0	0	3	0	0
.................................................................................................................................................................TATTCCCAAGTACTGCTCGAT..............	21	1	3.00	3	0	0	0	0	2	1	0
............ATAGCGAACCTTTTTGCTGGCATTGCGCA...........................................................................................................................................................	29	1	3.00	3	0	0	0	0	3	0	0
..........................................................................................................................................................................GTACTGCTCGATTCTGCGC.......	19	1	2.00	2	0	0	0	0	0	2	0
.............................................................................................................................................................ATGATATTCCCAAGTACTGCT..................	21	1	2.00	2	0	0	0	0	0	2	0
.........................................................................................................................................................AAATATGATATTCCCAAGTACTGCTCGAT..............	29	1	2.00	2	0	0	0	0	2	0	0
..........................................................................................................................................................AATATGATATTCCCAAGTACTGCTCG................	26	1	2.00	2	0	0	0	0	2	0	0
.....................................................................................................................................................................CCCAAGTACTGCTCGATTCTGCGCGA.....	26	1	2.00	2	0	0	0	0	2	0	0
..................................................................................................................................................................ATTCCCAAGTACTGCTCGATTCTGCGCG......	28	1	2.00	2	0	0	0	0	2	0	0
...........................................................................................................................................................ATATGATATTCCCAAGTACTGCTCGA...............	26	1	2.00	2	0	0	0	0	1	1	0
..........................................................................................................................................................AATATGATATTCCCAAGTACTGCTCGA...............	27	1	2.00	2	0	0	0	0	2	0	0
.............................................................................................................................................................ATGATATTCCCAAGTACTGCTCG................	23	1	2.00	2	0	0	0	0	1	1	0
..CTTCAGCACTATAGCGAACCTT............................................................................................................................................................................	22	1	2.00	2	0	0	1	0	1	0	0
.................GAACCTTTTTGCTGGCATTGCGCAG..........................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	2	0
........................................................................................................................................................GAAATATGATATTCCCAAGTACTGCTC.................	27	1	2.00	2	1	0	0	0	1	0	0
........................TTTGCTGGCATTGCGCAGTA........................................................................................................................................................	20	1	2.00	2	0	0	0	0	1	1	0
...............................................................................................................................................................GATATTCCCAAGTACTGCTC.................	20	1	2.00	2	1	0	0	0	1	0	0
..........................................................................................................................................................AATATGATATTCCCAAGTACTGCT..................	24	1	2.00	2	0	0	0	0	1	1	0
..........................................................................................................................................................AATATGATATTCCCAAGTACTGCTCGATT.............	29	1	2.00	2	1	0	0	0	1	0	0
...................................................................................................................................................................TTCCCAAGTACTGCTCGATTCTGCGCGA.....	28	1	2.00	2	0	0	0	0	2	0	0
.........................................................................................................................................................AAATATGATATTCCCAAGTACT.....................	22	1	2.00	2	0	0	0	0	1	1	0
........................................................................................................................................................................AAGTACTGCTCGATTCTGCGCGA.....	23	1	2.00	2	0	0	0	0	2	0	0
...............GCGAACCTTTTTGCTGGCATTGCGCAGT.........................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0
...TTCAGCACTATAGCGAACCTTTTTGCT......................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1	0
......................TTTTTGCTGGCATTGCGCAG..........................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
...........TATAGCGAACCTTTTTGCT......................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................TCCCAAGTACTGCTCGATTCTG..........	22	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................TTCCCAAGTACTGCTCGAT..............	19	1	1.00	1	0	0	0	0	1	0	0
.............................................................................................................................................................ATGATATTCCCAAGTACTGCTCGATT.............	26	1	1.00	1	0	0	0	0	1	0	0
.................................................................................................................................................................TATTCCCAAGTACTGCTC.................	18	1	1.00	1	0	0	0	0	1	0	0
....................CCTTTTTGCTGGCATTGCGCAG..........................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................AGTACTGCTCGATTCTGCGCGA.....	22	1	1.00	1	0	0	0	0	0	1	0
...................ACCTTTTTGCTGGCATTGC..............................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
...................................................................................................................................................................TTCCCAAGTACTGCTCGATT.............	20	1	1.00	1	0	0	0	0	1	0	0
...........................................................................................................................................................ATATGATATTCCCAAGTACTGCTCG................	25	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................................................................................GATATTCCCAAGTACTGCTCGA...............	22	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................TCCCAAGTACTGCTCGATTCTGCGCG......	26	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................................ATTCCCAAGTACTGCTCGA...............	19	1	1.00	1	0	0	0	0	1	0	0
.......................................................................................................................................................AGAAATATGATATTCCCAAGTACTGCT..................	27	1	1.00	1	0	0	0	0	0	1	0
.................GAACCTTTTTGCTGGCATTG...............................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
....TCAGCACTATAGCGAACCTTTTTGCT......................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0
.................GAACCTTTTTGCTGGCATT................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................ATATTCCCAAGTACTGCTCGATT.............	23	1	1.00	1	1	0	0	0	0	0	0
......................................GCAGTACCAAAAGTAGGT............................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
ATCTTCAGCACTATAGCGAACCTTT...........................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
...........................................................................................................................................................ATATGATATTCCCAAGTACTGCTCGATTC............	29	1	1.00	1	0	0	0	0	1	0	0
............................................................................................................................................................TATGATATTCCCAAGTACTGCTC.................	23	1	1.00	1	0	0	0	0	1	0	0
..........CTATAGCGAACCTTTTTGCT......................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
.....................................................................................................................................................................CCCAAGTACTGCTCGATTCT...........	20	1	1.00	1	0	0	0	0	1	0	0
................................................................................................................................................................ATATTCCCAAGTACTGCTCGATTCTG..........	26	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................ATATGATATTCCCAAGTACTGCTCT................	25	1	1.00	1	0	0	1	0	0	0	0
..CTTCAGCACTATAGCGAACCTTTTTGCT......................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	1	0
............................................................................................................................................................................ACTGCTCGATTCTGCGCGAGTTCA	24	1	1.00	1	1	0	0	0	0	0	0
.................GAACCTTTTTGCTGGCATTGCGCAGTA........................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0	0
.......................................................................................................................................................................CAAGTACTGCTCGATTCTGCGCG......	23	1	1.00	1	0	0	0	0	0	1	0
....................................................................................................................................................................TCCCAAGTACTGCTCGAT..............	18	1	1.00	1	0	0	0	0	1	0	0
........................TTTGCTGGCATTGCGCAGT.........................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
....................CCTTTTTGCTGGCATTGCGCAGT.........................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1	0
.....................CTTTTTGCTGGCATTGCGCAGT.........................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0
...................................................................................................................................................................TTCCCAAGTACTGCTCGATTCTGCGCG......	27	1	1.00	1	0	0	0	0	1	0	0
......................TTTTTGCTGGCATTGCGC............................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
...........TATAGCGAACCTTTTTGCTGGCATTGCGCA...........................................................................................................................................................	30	1	1.00	1	0	0	0	0	1	0	0
............................................................................................................................................................TATGATATTCCCAAGTACTGCTCGATT.............	27	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................AAATATGATATTCCCAAGTACTGCTCGA...............	28	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................TCCCAAGTACTGCTCGATTCTGCGCGA.....	27	1	1.00	1	0	0	0	0	0	1	0
..........................................................................................................................................................................GTACTGCTCGATTCTGCGCG......	20	1	1.00	1	0	0	0	0	1	0	0
............ATAGCGAACCTTTTTGCT......................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
......................................................................................................................................................................CCAAGTACTGCTCGATTCTGCGC.......	23	1	1.00	1	0	0	0	0	1	0	0
.........ACTATAGCGAACCTTTTTGCT......................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0
..............................................................................................................................................ATAGACCGGAGAAATATGA...................................	19	1	1.00	1	0	0	0	0	0	1	0
..........................................................................................................................................................AATATGATATTCCCAAGTA.......................	19	1	1.00	1	0	0	0	0	0	1	0
................CGAACCTTTTTGCTGGCATTGCGC............................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0
...............................................................................................................................................................GATATTCCCAAGTACTGCTCGAT..............	23	1	1.00	1	0	0	0	0	1	0	0
.................................................................................................................................................................TATTCCCAAGTACTGCTCGATTCT...........	24	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................AAATATGATATTCCCAAGTACTGCTCG................	27	1	1.00	1	0	0	0	0	1	0	0
................................................................................................................................................................ATATTCCCAAGTACTGCTC.................	19	1	1.00	1	0	0	0	0	1	0	0
.................GAACCTTTTTGCTGGCATTGC..............................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0
.............TAGCGAACCTTTTTGCTGGC...................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................AGTACTGCTCGATTCTGCGCG......	21	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................CCAAGTACTGCTCGATTCTGCGCGA.....	25	1	1.00	1	0	0	0	0	1	0	0
...................................................................................................................................................................TTCCCAAGTACTGCTCGATTCTGCGC.......	26	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................AAATATGATATTCCCAAGTACTGCTC.................	26	1	1.00	1	0	0	0	0	0	1	0
..................................................................................................................................................................ATTCCCAAGTACTGCTCGATTCTGCGCGA.....	29	1	1.00	1	0	0	0	0	1	0	0
...........................................................................................................................................................ATATGATATTCCCAAGTACTGCT..................	23	1	1.00	1	0	0	0	0	0	1	0
..................................................................................................................................................ACCGGAGAAATATGATATTCC.............................	21	1	1.00	1	0	0	1	0	0	0	0
...............................................................................................................................................................GATATTCCCAAGTACTGCTCGATT.............	24	1	1.00	1	0	0	0	0	1	0	0
.................................ATTGCGCAGTACCAAAAACC...............................................................................................................................................	20	10	0.20	2	1	0	0	0	1	0	0

droYak3

ATCTTCAGCACTATAGCGAACATTTTTGCTGGCATTGCTCAGTACCAAAAGTAGGTGATACG-AA-----ACAAACTAATGG-------------ATGT----------ATTAATAATT--C-----ATT----ATTTACCCATAGACCGGAGAAATATGATATTCCCACCTACTGCTCCATTCTGCGAGAGTTCA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.................GAACATTTTTGCTGGCATTGCTCA...........................................................................................................................................................	24	2	1.50	3	0	2	0	0	0	0	1	0	0	0	0
.....................ATTTTTGCTGGCATTGCTCA...........................................................................................................................................................	20	2	1.50	3	0	2	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................AATATGATATTCCCACCTACT.....................	21	2	1.00	2	2	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................GAAATATGATATTCCCACCTACT.....................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................ATATGATATTCCCACCTACTG....................	21	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................AATATGATATTCCCACCTACTGC...................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.................GAACATTTTTGCTGGCATTG...............................................................................................................................................................	20	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................ATATGATATTCCCACCTACTGCTCC................	25	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
...................ACATTTTTGCTGGCATTGCTCA...........................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................ATATGATATTCCCACCTACT.....................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.................GAACATTTTTGCTGGCATT................................................................................................................................................................	19	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................ATTTACCCATAGACCGGAGAA.........................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................AATT--C-----ATT----ATTTACCCATAGACCGGA............................................	26	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
....................CATTTTTGCTGGCATTGCTCA...........................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
.........ACTATAGCGAACATTTTTGCT......................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

ATCTTCAGCACTATTGCCAACATTTTCGCTGGCATTGCTCAGTACCAAAAGTAGGTGGCACA-TA----------TAAA-----AATTATAAAA-ACTA----------AGTTATAATA--T-----AAT----ATTTCCCAACAGGCCCGAGAAATATGACATTCCCACATACTGCTCTATTTTGCGAGAGTTTA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

ATATTCAGCACCATTGCCAACATTTTCGCCGGCATTGCTCAGTACCAAAAGTAGACATTAAA-AA-----AAAGTCTTAAGG-------------AGTA----------AGTTATAACA--T-----TGT----TTTATCCCATAGGCCAGAGAATTACGACATTCCCAAGTACTGCTCGATTCTTCGAGAATTCA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

ATCTTTAGCACCATTGCCAACATTTTCGCCGGCATTGCTCAGTACCAAAAGTAGGCGATTCA-AA-----AAAAACTGGAAGA------------TCTT----------GATAATAATA--C-----ATT----ATTTTCCCATAGGCCAGAGAACTACGACATTCCCAAGTACTGCTCCATTCTGCGAGAATTCA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

ATATTCAGCACCATTGCCAACGTTTTCGCCGGCATTGCTCAGTACCAAAAGTAGGTGGCATT-AA-----ACAACCATAGAG-------------ATAT----------AATGATAATT--C-----AATATT-TGTTTTTCATAGGCCAGAAAATTATGACATTCCCAAATATTGCTCAATTTTGCGAGAGTTCA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

ATCTTCAGCACCATTGCGAACATTTTCGCCGGCATTGCTCAGTACCAAAAGTAGGTGGCATT-GA-----ACAACCATACAGA------------ATTT----------AGTGATAATT--T-----AAT----TGTTTCCCCTAGGCCGGAGAACTATGACATTCCAAAATATTGCTCTATTTTGCGAGAGTTCA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

ATATTCAGCACTATTGCCAATATTTTTGCCGGCATTGCTCAATACCAAAAGTAAGTGGTACG-AA-----CCAACCAAACGA-------------ACTT----------ATTTTGATTT--A-----AAA----TGTTCTCTTTAGGCCAGAAAACTACGACATTCCCAAGTACTGTTCTATTCTGCGAGAGTTTA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

ATATTCAGCACCATTGCCAATATCTTCGCCGGCATTGCCCAATACCAAAAGTGGGACTCTTA-AC-----ATT--AACA-----GATTATTGGG--AAT----------ATTTATTACC--C-----A--------TTATTTCTAGGCCTGAGAAGTACGACCTGCCCCAGTACTGTTCGGTGCTGCGATCCTTCA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

ATATTCAGCACTATTGCCAACATTTTTGCAGGAATTGCCCAATACCAAATGTAAGTAGCACT-CC-----CCACCATACAGA-------------AACT-------GTTATTTCTAATT--T-----AAT----TACATTCCAAAGTCCAGCGAATTATGACATTCCCAAGCAATGCTCGGTGCTGAGGTCCTTCA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..........CTATTGCCAACATTTTTGCAGGA...................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
...................ACATTTTTGCAGGAATTGCCCAAT.........................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0

droBip1

ATATTCAGCACCATTGCCAATATTTTCGCCGGAATCGCTCAATACCAAAAGTAAGTAGCTCT-GTTGTAGACAACCAACA------------------A----ACTTTTATTTGT------------ACG----ATTATCTTGTAGTCCAGCGAATTATGACATCGCCCAGTACTGCTCGGTGCTGAGGAGCTTCA	Size	Hit Count	Total Norm	Total
No Reads

dp5

ATTTTCAGCACCATAGCCAATGTATTCGCAGGACTGGCACAGTACCAAAAGTAGGTACAAAAGGT---------ACA-A-----GGATCTAAGGAGTGCAGTAA-----A-----T--TTATATAGAAGC----CTTTCCCTTTAGACCTGGAAACTATGATCTGCCCAAGTACTGTTCGGTGCTGCGTTCCTTCA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.......GCACCATAGCCAATGTATTCGCAGGACT.................................................................................................................................................................	28	2	12.50	25	3	22	0	0	0	0	0	0	0	0
.......GCACCATAGCCAATGTATTCGCAGG....................................................................................................................................................................	25	2	6.00	12	0	12	0	0	0	0	0	0	0	0
.................CAATGTATTCGCAGGACTGG...............................................................................................................................................................	20	2	5.00	10	0	8	0	0	0	0	2	0	0	0
..................................................................................................................................................................CTGCCCAAGTACTGTTCGGT..............	20	2	3.50	7	0	7	0	0	0	0	0	0	0	0
............ATAGCCAATGTATTCGCAGG....................................................................................................................................................................	20	2	3.00	6	0	5	0	0	0	0	1	0	0	0
...............................................................................................................................................................GATCTGCCCAAGTACTGTTCGGT..............	23	2	3.00	6	0	6	0	0	0	0	0	0	0	0
................................................................................................................................................................ATCTGCCCAAGTACTGTTCGGT..............	22	2	2.50	5	0	5	0	0	0	0	0	0	0	0
.................CAATGTATTCGCAGGACTGGCACAGT.........................................................................................................................................................	26	2	2.50	5	0	5	0	0	0	0	0	0	0	0
.......GCACCATAGCCAATGTATTCGCAGGAC..................................................................................................................................................................	27	2	2.50	5	0	5	0	0	0	0	0	0	0	0
..............AGCCAATGTATTCGCAGGACT.................................................................................................................................................................	21	2	2.50	5	1	4	0	0	0	0	0	0	0	0
..................AATGTATTCGCAGGACTGGCACA...........................................................................................................................................................	23	2	2.50	5	0	5	0	0	0	0	0	0	0	0
.................CAATGTATTCGCAGGACTG................................................................................................................................................................	19	2	2.50	5	0	5	0	0	0	0	0	0	0	0
.........................................................................................................................................................AACTATGATCTGCCCAAGTACT.....................	22	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.................CAATGTATTCGCAGGACT.................................................................................................................................................................	18	2	2.00	4	4	0	0	0	0	0	0	0	0	0
..............AGCCAATGTATTCGCAGGACTG................................................................................................................................................................	22	2	1.50	3	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................................................CTATGATCTGCCCAAGTACTGTTCGGT..............	27	2	1.50	3	0	2	0	0	0	0	1	0	0	0
...........CATAGCCAATGTATTCGCAGG....................................................................................................................................................................	21	2	1.50	3	0	3	0	0	0	0	0	0	0	0
..................AATGTATTCGCAGGACTGG...............................................................................................................................................................	19	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.......GCACCATAGCCAATGTATTCGCAGGACTG................................................................................................................................................................	29	2	1.50	3	1	1	0	0	0	0	1	0	0	0
.........................................................................................................................................................AACTATGATCTGCCCAAGTACTGTTC.................	26	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.....................GTATTCGCAGGACTGGCACA...........................................................................................................................................................	20	2	1.50	3	0	3	0	0	0	0	0	0	0	0
......AGCACCATAGCCAATGTATTCGCAGG....................................................................................................................................................................	26	2	1.50	3	0	3	0	0	0	0	0	0	0	0
..........................CGCAGGACTGGCACAGTACC......................................................................................................................................................	20	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.......GCACCATAGCCAATGTATTCGCAG.....................................................................................................................................................................	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................TCGGTGCTGCGTTCCTTCA	19	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.....................GTATTCGCAGGACTGGCAC............................................................................................................................................................	19	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................GATCTGCCCAAGTACTGTTCGGTGCTGC.........	28	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.....................GTATTCGCAGGACTGGCACAGT.........................................................................................................................................................	22	2	1.00	2	0	1	0	0	0	0	1	0	0	0
......................................................................................................................................................GGAAACTATGATCTGCCCAAGTA.......................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
......AGCACCATAGCCAATGTATTCGCAGGACT.................................................................................................................................................................	29	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................................TGCCCAAGTACTGTTCGGTGCTGC.........	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.......................ATTCGCAGGACTGGCACA...........................................................................................................................................................	18	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.......................ATTCGCAGGACTGGCACAGTACCAA....................................................................................................................................................	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..................AATGTATTCGCAGGACTG................................................................................................................................................................	18	2	1.00	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................ACTGTTCGGTGCTGCGTTCCTT..	22	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................AACTATGATCTGCCCAAGT........................	19	2	1.00	2	0	1	0	0	0	0	1	0	0	0
..............AGCCAATGTATTCGCAGG....................................................................................................................................................................	18	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...................ATGTATTCGCAGGACTGGC..............................................................................................................................................................	19	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..........CCATAGCCAATGTATTCGCAGGACT.................................................................................................................................................................	25	2	1.00	2	0	1	0	0	0	0	1	0	0	0
............................................................................................................................................................................ACTGTTCGGTGCTGCGTTC.....	19	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.................CAATGTATTCGCAGGACTGGC..............................................................................................................................................................	21	2	1.00	2	0	2	0	0	0	0	0	0	0	0
............ATAGCCAATGTATTCGCAGGACT.................................................................................................................................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..................AATGTATTCGCAGGACTGGC..............................................................................................................................................................	20	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................GAAACTATGATCTGCCCAA..........................	19	2	1.00	2	0	2	0	0	0	0	0	0	0	0
............ATAGCCAATGTATTCGCAGGACTG................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................CTGCCCAAGTACTGTTCGGTGCT...........	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................CTGGAAACTATGATCTGCC.............................	19	2	0.50	1	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................CTGCCCAAGTACTGTTCGGTGC............	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................CGCAGGACTGGCACAGTACCAAA...................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................CGCAGGACTGGCACAGTACCAA....................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TACTGTTCGGTGCTGCGTTC.....	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............TAGCCAATGTATTCGCAGG....................................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................ATGTATTCGCAGGACTGGCACAGTACC......................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................CAATGTATTCGCAGGACTGGCACAGTAC.......................................................................................................................................................	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................ATGTATTCGCAGGACTGGCACA...........................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......GCACCATAGCCAATGTATTCGCAGGA...................................................................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................GATCTGCCCAAGTACTGTTC.................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACTATGATCTGCCCAAGTACT.....................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................AATGTATTCGCAGGACTGGCACAGTACC......................................................................................................................................................	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................CAAGTACTGTTCGGTGCTGCGTTCCTT..	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............AGCCAATGTATTCGCAGGACTGG...............................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........CACCATAGCCAATGTATTCGCAGGAC..................................................................................................................................................................	26	2	0.50	1	1	0	0	0	0	0	0	0	0	0
..............AGCCAATGTATTCGCAGGACTGGCACA...........................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............ATAGCCAATGTATTCGCAGGAC..................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................TTCGCAGGACTGGCACAGTACCAAAA..................................................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................TATTCGCAGGACTGGCACAGTA........................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............AGCCAATGTATTCGCAGGACTGGCACAG..........................................................................................................................................................	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....................GTATTCGCAGGACTGGCACAGTAC.......................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................CTGCCCAAGTACTGTTCGGTGCTGC.........	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACTATGATCTGCCCAAGTACTGTTC.................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................ACTGTTCGGTGCTGCGTTCCT...	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................GGAAACTATGATCTGCCCAAGTACT.....................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............ATAGCCAATGTATTCGCAGGACTGGC..............................................................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................CTGTTCGGTGCTGCGTTCCTT..	21	2	0.50	1	0	0	0	0	0	0	1	0	0	0
....................................................................................................................................................................GCCCAAGTACTGTTCGGTGCTGC.........	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................CAGGACTGGCACAGTACCA.....................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................TGCCCAAGTACTGTTCGGTGC............	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................TCTGCCCAAGTACTGTTCGGT..............	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................AATGTATTCGCAGGACTGGCACAGT.........................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............ATAGCCAATGTATTCGCAG.....................................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................CCAATGTATTCGCAGGACTGG...............................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................AATGTATTCGCAGGACTGGCACAGTAC.......................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................ACTGGCACAGTACCAAAAGTA...............................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................GAAACTATGATCTGCCCAAGT........................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................TGATCTGCCCAAGTACTGTTCGGT..............	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................ATGATCTGCCCAAGTACTGTTCGGT..............	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............TAGCCAATGTATTCGCAGGAC..................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................ATGTATTCGCAGGACTGGCACAGT.........................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................ATTCGCAGGACTGGCACAGTA........................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................AGC----CTTTCCCTTTAGACCTGGA...........................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............GCCAATGTATTCGCAGGACT.................................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................GATCTGCCCAAGTACTGTTCGGTG.............	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................GTTCGGTGCTGCGTTCCTT..	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................AAACTATGATCTGCCCAAGT........................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................GGAAACTATGATCTGCCCAAGTACTGTTC.................	29	2	0.50	1	0	0	0	0	0	0	1	0	0	0
.......GCACCATAGCCAATGTATTCG........................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................TATTCGCAGGACTGGCACA...........................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................CGCAGGACTGGCACAGTAC.......................................................................................................................................................	19	2	0.50	1	1	0	0	0	0	0	0	0	0	0
.......................ATTCGCAGGACTGGCACAGTACCAAAA..................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................GTACTGTTCGGTGCTGCGTTCCTT..	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................TGCCCAAGTACTGTTCGGT..............	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................CTGCCCAAGTACTGTTCGG...............	19	2	0.50	1	0	0	0	0	0	0	1	0	0	0
.................CAATGTATTCGCAGGACTGGCA.............................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................ATTCGCAGGACTGGCACAGTACC......................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................TGTATTCGCAGGACTGGCACA...........................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	1	0	0	0
.....................................................................................................................................................TGGAAACTATGATCTGCCC............................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................ATTCGCAGGACTGGCACAGT.........................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	1	0	0	0
...........CATAGCCAATGTATTCGCAGGACT.................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................CAATGTATTCGCAGGACTGGCACA...........................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....TCAGCACCATAGCCAATGT.............................................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................GACCTGGAAACTATGATCTGC..............................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......GCACCATAGCCAATGTATTCGC.......................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............ATAGCCAATGTATTCGCAGGACTGGCA.............................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0

droPer2

ATTTTCAGCACCATAGCCAATGTATTCGCAGGACTGGCACAGTACCAAAAGTAGGTACAAAAGGT---------ACA-A-----GGATCTAAGGAGTGCAGTAA-----A-----T--TTATATAGAAGC----CTTTCCCTTTAGACCTGGAAACTATGATCTGCCCAAGTACTGCTCGGTGCTGCGTTCCTTCA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..............AGCCAATGTATTCGCAGGACT.................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
...............GCCAATGTATTCGCAGGAC..................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
.......GCACCATAGCCAATGTATTCGCAGGA...................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
..............AGCCAATGTATTCGCAGGACTGG...............................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
...................ATGTATTCGCAGGACTGGCA.............................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................CTGCCCAAGTACTGCTCGGT..............	20	1	1.00	1	0	0	0	0	0	1
....................................................................................................................................................................GCCCAAGTACTGCTCGGTGCTGCGTT......	26	1	1.00	1	0	1	0	0	0	0
............ATAGCCAATGTATTCGCAGGA...................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
.......GCACCATAGCCAATGTATTCGCA......................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
............ATAGCCAATGTATTCGCAGGACTG................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0

droWil2

ATCTTTAGTACAATAGCAAATGTCTTTGCTGACATCGCTCAATATCAAAAGTAAGTAGAATC-AA-----AAA--------GATGGTGATAAGA-AACA----------ACTAACAATT--T-----T-CACGTACTCTTCTTAAGACCCGACAACTACGACTTGCCCAAATATTGCTCAGTTCTGAGAAGCTTCA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
No Reads

droVir3

ATATTCAGCACGATTGCAAATGTTTTTGCCGGCATTGCCCAGTACCAAAAGTAACAAAAA---AA-----ACATTCAAA-----ATATTTGC---TTGCT----------ATATCATTA--T-----GTT----CTTTCTACTTAGACCCGAAAACTACGACTTGGCCCAATATTGCTCCGTTCTTCGTAGCTTTG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.........................................................................................................................................................................AATATTGCTCCGTTCTTCGT.......	20	1	9.00	9	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0
..ATTCAGCACGATTGCAAAT...............................................................................................................................................................................	19	1	6.00	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GTTTTTGCCGGCATTGCCCAGT.........................................................................................................................................................	22	1	6.00	6	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0
..........................................................................................................................................................................ATATTGCTCCGTTCTTCGT.......	19	1	5.00	5	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
....................................................................................................................................................................GGCCCAATATTGCTCCGTTCTTCGT.......	25	1	5.00	5	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.......................................................................................................................................................................CCAATATTGCTCCGTTCTTCGT.......	22	1	5.00	5	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
...................ATGTTTTTGCCGGCATTGCCCAGT.........................................................................................................................................................	24	1	5.00	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0
........................................................................................................................................................................CAATATTGCTCCGTTCTTCGT.......	21	1	5.00	5	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
.....................GTTTTTGCCGGCATTGCCCA...........................................................................................................................................................	20	1	4.00	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..ATTCAGCACGATTGCAAATGT.............................................................................................................................................................................	21	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GTTTTTGCCGGCATTGCCCAGTAC.......................................................................................................................................................	24	1	3.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................ATATTGCTCCGTTCTTCGTA......	20	1	3.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
...........................................................................................................................................................CTACGACTTGGCCCAATATTGCTCC................	25	1	3.00	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..ATTCAGCACGATTGCAAATGTT............................................................................................................................................................................	22	1	3.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................................................................GCCCAATATTGCTCCGTTCTTCGT.......	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.......................................................................................................................................................AAAACTACGACTTGGCCCA..........................	19	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ATATTCAGCACGATTGCAAAT...............................................................................................................................................................................	21	1	3.00	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................GACTTGGCCCAATATTGCTCCGTT.............	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..ATTCAGCACGATTGCAAATGTTTTTGCC......................................................................................................................................................................	28	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TTCAGCACGATTGCAAATGTT............................................................................................................................................................................	21	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................GGCATTGCCCAGTACCAAA...................................................................................................................................................	19	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GTTTTTGCCGGCATTGCCCAG..........................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................................................CAATATTGCTCCGTTCTTCGTA......	22	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
ATATTCAGCACGATTGCAAATGT.............................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................GCCCAATATTGCTCCGTTCTT..........	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ATATTCAGCACGATTGCAA.................................................................................................................................................................................	19	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................CCCGAAAACTACGACTTGGCC............................	21	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................CCAATATTGCTCCGTTCTTCGTAGCT...	26	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................GACTTGGCCCAATATTGCTCC................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.TATTCAGCACGATTGCAAAT...............................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GTTTTTGCCGGCATTGCCCAGTACC......................................................................................................................................................	25	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.......................................................................................................................................................................CCAATATTGCTCCGTTCTTC.........	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................TTTTGCCGGCATTGCCCA...........................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................ACCCGAAAACTACGACTTGGCC............................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....TCAGCACGATTGCAAATGTTTT..........................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................GGCCCAATATTGCTCCGT..............	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................TACGACTTGGCCCAATATTGCTCC................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GTTTTTGCCGGCATTGCCCAGTACCAAA...................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....CAGCACGATTGCAAATGTT............................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................GAAAACTACGACTTGGCC............................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................CCAATATTGCTCCGTTCTTCGTAGC....	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................TTTTTGCCGGCATTGCCCAGTACC......................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TATTGCTCCGTTCTTCGTA......	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................CCCGAAAACTACGACTTGGCCCAATATT.....................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........ACGATTGCAAATGTTTTTGC.......................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................TTTTTGCCGGCATTGCCCAGT.........................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................AACTACGACTTGGCCCAATATTGCT..................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................CGAAAACTACGACTTGGCCC...........................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................CTTGGCCCAATATTGCTCCGTTCTTCGT.......	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................TTTTTGCCGGCATTGCCC............................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................ACTTGGCCCAATATTGCTCC................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................AATATTGCTCCGTTCTTCGTA......	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................ATATTGCTCCGTTCTTCG........	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............TTGCAAATGTTTTTGCCGG....................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CGATTGCAAATGTTTTTGCCGGC...................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................ACTTGGCCCAATATTGCTCCG...............	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....TCAGCACGATTGCAAATGTT............................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................CGACTTGGCCCAATATTGCTCCG...............	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................GACTTGGCCCAATATTGCTCCG...............	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................TTTTGCCGGCATTGCCCAG..........................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................ACCCGAAAACTACGACTTGGCCCAAT........................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................GCCCAATATTGCTCCGTTCTTC.........	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................TTGCCGGCATTGCCCAGTAC.......................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....CAGCACGATTGCAAATGTTTTTGC.......................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
........................TTTGCCGGCATTGCCCAGTACC......................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GCACGATTGCAAATGTTTT..........................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................GCCGGCATTGCCCAGTACCAAA...................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................TTTGCCGGCATTGCCCAGTACCAAAA..................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................CAATATTGCTCCGTTCTTCGTAGCTT..	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ATATTCAGCACGATTGCAAATGTTT...........................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................ACCCGAAAACTACGACTTGGCCCAA.........................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................TGGCCCAATATTGCTCCGT..............	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................CCCAATATTGCTCCGTTCTTCGT.......	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................TTTGCCGGCATTGCCCAGTACCAA....................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................AAAACTACGACTTGGCCC...........................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TGCCGGCATTGCCCAGTACCAA....................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........ACGATTGCAAATGTTTTTGCCGGC...................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................GCCCAATATTGCTCCGTTCTTCGTAGCT...	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............ATTGCAAATGTTTTTGCCGGCAT.................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................TGGCCCAATATTGCTCCGTTCTTCGT.......	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................ACCCGAAAACTACGACTTGGCCCA..........................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ATATTCAGCACGATTGCAAATG..............................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................CCCAATATTGCTCCGTTCTTCGTA......	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................TTGGCCCAATATTGCTCCGTTCTTCGT.......	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................GAAAACTACGACTTGGCCCAAT........................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................ACGACTTGGCCCAATATTGCTCC................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................AACTACGACTTGGCCCAATATTG....................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................TTTGCCGGCATTGCCCAGTAC.......................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................ATGTTTTTGCCGGCATTGCCCA...........................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................TGTTTTTGCCGGCATTGCCCAGT.........................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................TTTTGCCGGCATTGCCCAGT.........................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
....TCAGCACGATTGCAAATGTTTTTGC.......................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................CTTGGCCCAATATTGCTCCGTT.............	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................................AAACTACGACTTGGCCCAAT........................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................AAA-----ATATTTGC---TTGCT----------ATAT..................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............TGCAAATGTTTTTGCCGGCATTGCCCAGT.........................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CTACGACTTGGCCCAATATTGCTCCGTT.............	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................GAAAACTACGACTTGGCCCAATATTG....................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................GAAAACTACGACTTGGCCCA..........................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GCACGATTGCAAATGTTTTTGCCGG....................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACTACGACTTGGCCCAATATTGCTC.................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........GATTGCAAATGTTTTTGCCG.....................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................CTTGGCCCAATATTGCTCCG...............	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................TGGCCCAATATTGCTCCGTTC............	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TGCCGGCATTGCCCAGTAC.......................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........ACGATTGCAAATGTTTTTGCCGGCAT.................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TTCAGCACGATTGCAAATGTTT...........................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................GTTTTTGCCGGCATTGCCC............................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CTACGACTTGGCCCAATATTG....................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................ACGACTTGGCCCAATATTGCT..................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................ACCCGAAAACTACGACTTG...............................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................ATTGCCCAGTACCAAAAACC...............................................................................................................................................	20	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ATATTTAGCTTGATTGCAAACATATTTGCAGGCATAGCGCAGTACCAAAAGTAACTATG----GC-----ACAAGCAACA-----TCTTT-CT--TCTT-------C--TTCTATATGA--T-----TTT----GTTTCTTTGTAGACCAGAAAACTATGATTTGGCCCGATCTTGCTCCGTTCTGCGAAACTTGG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...................ACATATTTGCAGGCATAGCGCA...........................................................................................................................................................	22	2	0.50	1	1	0	0	0	0	0

droGri2

ATTTTTAGCACAATTGCAAACATTTTGGCAGGCCTCGCCCAGTACCAAAAGTAATTAT---G-CA-----ACGCCCCCA-----ATTTACGA---AAGCT----------A-CATGTGT--T-----TTT----ACTTCAATACAGCCCGGCAAACTATGACTTGGCCAAACATTGCTCAGTGCTTCGATCCTTTA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_18067

3r:6039241-6039296 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads