ID:

dsi_17981

 Coordinate:

3r:11963726-11963875 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [3r_11963876_11964123_+]; exon [3r_11963876_11964123_+]; intron [3r_11962323_11963875_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AATTAATAAGTGTAGATTATAAATGTAAACCAGATCGGAAAAGTTTATTGTGATTGTTTGGCATGTTAATGTATTTAGTAATGTATATTGTTAGTAATATAATTTTGAACTTAAATTTTTTTATTTAAGCTTGTGCTTATTTTATTAAAGTGATTTTAAATTAGGTTGAAACTGGCTGACATATTTTCAATCTTTTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTACGGTGGTCATGGCAAGCGC
**************************************************.((((((...((.((.((((((((........)))))))).))))...))))))........(((((.(((((..(((((....)))))......))))).)))))......(((((((((.((.....))...))))))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body
......................................................................................................................................................................................................................................ACGGTGGTCATGGAA..... 15 1 9 9.67 87 62 18 0 0 0 4 3 0
......................................................................................................TGTTGAACTAAAATTTTTTTATT............................................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................CATGTGTGCTACGGTGGT............ 18 0 1 1.00 1 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................TGCCAGGCCTACTGGCATATG........................ 21 3 1 1.00 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................AATTAGTTTGAAACTGTGTGACA..................................................................... 23 3 2 0.50 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................GTTGGAACTGGCTGACA..................................................................... 17 1 2 0.50 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................GTTACGGTGGTCATGGCGA.... 19 2 2 0.50 1 1 0 0 0 0 0 0 0
.............................................TATTGTGATTGTATGGCA........................................................................................................................................................................................... 18 1 2 0.50 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................TACGGTGGTCATAGCGA.... 17 2 4 0.25 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................GTTACGGCGGTCATGGCGAG... 20 3 4 0.25 1 1 0 0 0 0 0 0 0
..........................................GTTTATTGTGATTGA................................................................................................................................................................................................. 15 1 20 0.10 2 2 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................ACGGTGGTCATGGAAG.... 16 2 20 0.10 2 2 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................ACGGTGATCATGGCAGG... 17 2 11 0.09 1 0 0 1 0 0 0 0 0
..........................................................................................................GAACTTACATTCTTTTATTTC........................................................................................................................... 21 3 14 0.07 1 0 0 0 1 0 0 0 0
........................................................................................................................................................ATCTTAAATTCGGTTGGAAC.............................................................................. 20 3 14 0.07 1 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................................................TGCTACGGTGTTCTTGG....... 17 2 14 0.07 1 0 0 1 0 0 0 0 0
...............................................TTGAGATTGTTTGGCA........................................................................................................................................................................................... 16 1 14 0.07 1 1 0 0 0 0 0 0 0
.......................................................................................................TTTGCACTTAAATTCTTTTCT.............................................................................................................................. 21 3 20 0.05 1 0 0 0 0 0 0 1 0

Anti-sense strand reads

TTAATTATTCACATCTAATATTTACATTTGGTCTAGCCTTTTCAAATAACACTAACAAACCGTACAATTACATAAATCATTACATATAACAATCATTATATTAAAACTTGAATTTAAAAAAATAAATTCGAACACGAATAAAATAATTTCACTAAAATTTAATCCAACTTTGACCGACTGTATAAAAGTTAGAAAACGTCTCCCTACGGTCCGGATGCCAGTACACACGATGCCACCAGTACCGTTCGCG
**************************************************.((((((...((.((.((((((((........)))))))).))))...))))))........(((((.(((((..(((((....)))))......))))).)))))......(((((((((.((.....))...))))))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
..................................................................................................................................................................TCCCACTTTGACCGACACTAT................................................................... 21 3 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................TGACCGACTGTATAAA................................................................ 16 0 3 0.33 1 0 1 0 0 0
.......TTCACATCTACTAGTTACAC............................................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 1 0 0
........TCACAGCTAATAGTTACA................................................................................................................................................................................................................................ 18 2 5 0.20 1 0 0 0 1 0
.......TTCACAGCTACTAGTTACA................................................................................................................................................................................................................................ 19 3 20 0.20 4 0 0 0 0 4
.....................................................................................................................ATAAATGAATCCGAACACGAAT............................................................................................................... 22 3 6 0.17 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11963676-11963925 + dsi_17981 AATTAAT---AAGTGTAGATTA----------T---------------------------------------------------------------------------------------------------------------AAATGTAAACCAGATCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTTATTGTGATTGTTTGGCATGTTAATGTATTTAGTAA-TGTATATTGTTAGTAATATAATTTTGAACTT---------------------------------------AAAT------------------------------------TTTTTTATTTAA------------------------------------GCTTGTGCTTATT-----------TTATTAAAGTG-------------------AT-------TTTAAATTAGGT---T---GAAACTGGC----TGACAT---------------ATTTTCAAT--C-TTTTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTACGGTGGTCATGGCAAGCGC
droSec2 scaffold_0:12789471-12789700 + AATTAAT---AAGTGTCGATTA----------C---------------------------------------------------------------------------------------------------------------AAATGTAAATCAGATCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------TTTTTGGCTTGTTAATGTATTTATTAA-TGTATATTGTTAGTAATACAATTTCTAATTT---------------------------------------AAATT-----------------------------------TATTTTATTTAA------------------------------------GCTTGTG-----------------CTCTTTAAGTG-------------------CT-------TTTAAATTAGGT---T---GACACTGGC----TGACAT---------------ATTTTCAAT--C-TTTTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTACGGTGGTCATGGCAAGCGC
dm3 chr3R:9215968-9216214 - AATTAAT---AAGTGTAGATTA----------T---------------------------------------------------------------------------------------------------------------AAATGTAAATGAGATCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTTATTGTGATTGTTTGGCTTGTTAATTTATTTATTAA-TGTATAGTGTTACTAATATAATTTCGAAT---------------------------CCAC--TTGTATTTAA-TT-----------------------------------TATTTT------------------------------------------ATTTAAG-----------------CTCTT-GGGTG-------------------CT-------TTTAAATTAGGT---T---GACACTGCC----TGACAT---------------ATTTTCAAT--C-TTTTTCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTACGGTGGTCATGGCAAGCGC
droEre2 scaffold_4770:12426047-12426319 + TATTAAT---AACTAAAGGTTA----------T---------------------------------------------------------------------------------------------------------------AAATGTAAATGAGATTA------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAGATTATTATGATTGTGTATCTTGGTAATATAATAAT-AAGTTGAT-TTCTTTGCAGATTTATTAGGAATTTTCTTTTCTTTTCCTTATTTCCTAGCCCTCATA----TTTAA-ACTTCTA------------------------------------------------------------------------------ACTTGTG-----------------CCCTTCAAGTA-------------------CT-------TTTAAATTGAGT---T---GACACTGCC----TGACAC---------------GTTTTCAAT--ATTTTTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGTTACGGTGGTCATGGCAAGCGC
droYak3 3R:13522529-13522766 - TATTAAT---AACTAAAGGTTA----------G---------------------------------------------------------------------------------------------------------------CAATGGAAATCAGCGCA------TT--------CCAAGATTATTTAA---TTTTTATTGGATATTTAAAAAA-----------------------------------------------------------------------------------------------------------------------------------------TTATATTTGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGA-------------ATTTCTTAGCCCTC--GTATATTTAA-CCTTGCA------------------------------------------------------------------------------ACTTGAG-----------------CTCTTTAAGTG-------------------CT-------TTTGAATTAAGT---T---GACACCGCC----TTACAT---------------ATTTTCAAT--C-TTTTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTACGGTGGTCATGGCAAGCGC
droEug1 scf7180000409802:788435-788788 + TTTTTAC---TGCCTTCGAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATAGAAATGCTTAAAGTAAAAAGTTAATTAAATTAG-----------------------------AAGTATTAATTGTTACATTAATATTTTGTATAAAATTAAGTTGCTTGAAATAATTCCTTTTAATTTTAATGATTTAAAATAATATTCAAATATTAGTATTGTATACATTTTAGTACTCATAAACAAACTAAATTGTAAACTAT----CTAAAATTAA-GT----------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTAC--------------------------------------CATG-TA------AATT------------TCCTT-AAAG-------------------CT-------CATAGTTTAAGA---C---AACACTGTT----TGACCAA---------TTCAAGTTTTCAATCTTATATTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTATGGTGGTCATGGCAAGCGC
droBia1 scf7180000302402:1920318-1920655 - AATAAAA---TAGGCC---------------------------------------------------CACAGAAAAACATTTACGAAAAATAAATATATAAAATATATATATAATAAAATGGTACCA------------------------------------------------------------------------------------------------------------------TTATGATAAATATACTTTTTTTT----AGAAATTGGA-ATTATAGAAAA-------------------------------------------------------T----AAATTTTTAACTCATTTAA--------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------TATTTAAAGGGAAACAAACTAATTAAAATTAATGT---------------------------------------------------------------------------------------------------------------------------------TGGTTTTAGTTATACATATTTTTTATAATAAATAATTAT--------------------------------------TTTG-TT------AATA----------TCCTTATAAGAG-------------------TA-------TTAAACTTGAGG---A---AGCCCTGCT----TGACTTA---------TTAATT-TTTCAAT--CTTCTTGCAGAGGGATGCCAGGCCTTCGGTCATGTTTGCTACGGTGGTCATGGCAAGCGT
droTak1 scf7180000415013:63838-64123 - AATTTTG---GGAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTT---------------------AGAATTTTTAATGTTTGCTATTAAATGTACCAAAAATAAATTTATTT----------------------------------------CT----------------------------------------------------------------------------------------------------ATTTAT-TGT------------------------------------------------------------------------------------TTTCTTTTTTTAAAGCATACATG----TTTTA-ACTTCAT--------------------------AA--ATTAAATGGTTATTTTATTTTTACTATATTAATTTTTTTGGCTGCCTTATTTATA-----------------CTCTTTAAAAG-------------------CT-------TTTGA--TGAGTTACCTTAAACTCTGCT----TGACTTA---------TTCACT-TTTCAAT--CTTTTTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTACGGTGGTCATGGCAAGCGC
droEle1 scf7180000491261:32514-32581 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAAT--CATTTTGCAGAGGGATGCCAGGCCTACGGCCATGTGTGCTACGGAGGTCATGGCAAGCGC
droRho1 scf7180000779659:500680-501020 + AATATCATTTTGATC-------AAAT-----------GTTTAC-----------------------------------------------------------------------------------TTTATATTATACTAAATTTATAGCCAA----------------------------------------------------------------------------------------------------------------------AATAGGAAATTCTAGAAAACTTTATTTTTAATTATTTTTTTTAACAATATGTATTTCAAAATTTTAAGATATTGCAAGAAAACTTCAAACTATTTATT--------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACTTAGG------------------------------------------------------------------------------------------------------------GTAATAAGACC----A--TTTTTATATTTAGCCGTACCTATTTATGAAATCGAATTCTTTT--------------------------------------CTTGACTTATC-----------------ATCTTTAATAG-------------------CT-------TCTAAGTCCAGG---C---AACGTTGCT----TGACTAA---------TTCATT-TTTCAAT--CATTTTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTACGGCGGTCATGGCAAGCGC
droFic1 scf7180000453906:284266-284529 + AATTGTT---AAATC--GTTT---------------------------------------------------------------------------------------------------------------------------TAAAGCCAATAAAATCGCTACTATTGACACTGATTAGGTCTATTA-ACTTTTTTTAATGAGTATCTAATATA---------------------------------------------------------------------------------------------------------------------------------------------ATTAATATTTGAGAA--ACGTA---------------------AGAATTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTGAG------------------------------------------------------------------------------------------------------------GCATCACGTAC----A--ATTTTAA------------------------------------------------------------------------------ATTCGAG-----------------CTGTTT-AAAG-------------------CT-------TCTTATTTAAGT---C---ATCACTGCT----TGAGTAA---------ATCATG-AATCGAC--TTTTTTGCAGAGGGGTGCCAGGCCTACGGCCATGTGTGTTACGGCGGTCATGGCAAGCGC
droKik1 scf7180000302392:611224-611538 + AATTAAT---ATATT-------TGATTATTTATAAATGTTTATTTCAGTGTTATAAATATCAGAGACCCCAGA--------------------------------------------------------------------------------------------------------------CTATAAG------------------A--TTTTAATTCATTAATAAAATATTTTGGAATTTCT--------------------AAGTCAATT----------------------------------------------T------GTATTACAAAAAGT----TCATAAAATTATTTTTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGG-------------CATTATTAGCTTTA--AAAAATATAA-TTATGCA--------------------------------------------------------------------------TTTATCATTTC-----------------TACATTTAAGA-------------------CA-------TTAAAA--ATGTAAGC---ACCACTGCTGCTGTGACTAA---------CTCACTTTTTCAAA--T-CTTCACAGAGGGATGCCAAGCCTTCGGACATGTATGCTACGGCGGTCATGGCAAGCGT
droAna3 scaffold_13340:1775492-1775789 - ACGA----------GGAGAATATATTC----------------TTAAGTACCATTTATTCCAAA--------------------------------------------------------------------AACCTTC-----CAATAAATTACCAATTA------TT--------CCAAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTAAATTCAGTTGG--------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTTTTAAAGTTTA--GATATAG-------------TATTTTATTAATGTATC------------------------------------------------------------------TAA---------------------------------------GTAATAAATAA-------------------------------------------------------AATTAAAAACTGGA-CTTATTGATAAATATTGGACACTGATTTAGCCGTTAAGTCTCACCTCTAGT---C---ATCTCTGTT----TAATTAA---------TTCACT-TTTCAAT--CCTTCTGCAGAGGGTTGCCAGGCCTTTGGCCATGTGTGTTACGGTGGACATGGCAAGCGC
droBip1 scf7180000396712:2557634-2557970 + AATTAAA---AGAAATCGATTC---------------------------------------------TCCAAT--------------------------------------------------------------------------------------------------------------TTGAAAA------------------A--TTTTATATT---TTCAAAATATTTAAGCATTTCTGTCAAATATTTTTTCGTTTAAAGAGAAAT----------------------------------------------T------GAAACCCCAAAGAA----TCAAAAAATTTTAAATTAATTTGA--------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTAATGTAGAT-GGGT---------------TCCTCATTTTATAAATGCATT------------------------------------------------------------------CAT---------------------------------------GTAATAAATAATTTTTTTTAA------------------------------------GTTTGTG--AACT-AGAACTGG---------------------CACGGTTTTAGCTATTAAATCTCACCTCCAGT---C---ATCACTGTT----TAATTAA---------TTCACT-TTTCCAT--CCTTCTACAGAGGGTTGTCAGGCCTTTGGCCATGTGTGCTACGGTGGACATGGCAAGCGC
dp5 2:9892252-9892342 + TGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAA-TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTCGATCTTCACC-CTCCCA---C-TCTTACAGAGGGATGCCAGGCCTACGGCCATGTGTGCTATGGGGGCCACGGCAAGCGC
droPer2 scaffold_0:10591274-10591364 - TGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAA-TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTCGATCTTCACC-CTCCCA---C-TCTTACAGAGGGATGCCAGGCCTACGGCCATGTGTGCTATGGGGGCCACGGCAAGCGC
droWil2 scf2_1100000004943:6288952-6289044 - AACCTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTGC--------ATTTTTGGTCTTTTTCTACAGAGGGCTGCCAGGCCTATGGGCATGTCTGTTACGGCGGCCATGGCAAACGT
droVir3 scaffold_12963:15784405-15784491 + TATCAAT---TTATT-------TAATA---------------------------------------------------------------------------------------------------------TTCTCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAAGTTGGAATCATAAATTATTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTTAA------------------------------------ATTTTTACTTATT-----------TAATTAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------AATTT
droMoj3 scaffold_4381:3900-3997 - TTTATTT---TGATT-------TAATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------TCA---TTTTACTTTGATTTA--TTTTATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATTTT---------------------------------------ATTT------------------------------------TATTTTATTTTA------------------------------------TTTTATTTTTATT-----------TTAT-----------------------------------------------------------------------------------------------------------------------------------------------------TATTATTTTA
droGri2 scaffold_14906:3733601-3733658 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACAGAGGGCTGCCAGGCTTATGGACACGTCTGTTACGGCGGACATGGGAAACGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AATTAAT---AAGTGTAGATTA----------T---------------------------------------------------------------------------------------------------------------AAATGTAAACCAGATCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTTATTGTGATTGTTTGGCATGTTAATGTATTTAGTAA-TGTATATTGTTAGTAATATAATTTTGAACTT---------------------------------------AAAT------------------------------------TTTTTTATTTAA------------------------------------GCTTGTGCTTATT-----------TTATTAAAGTG-------------------AT-------TTTAAATTAGGT---T---GAAACTGGC----TGACAT---------------ATTTTCAAT--C-TTTTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTACGGTGGTCATGGCAAGCGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTGCTACGGTGGT............1811.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATTGTGATTGA..................................................................................................................................................................................................................................................................................................................................................................................15200.10200000002000000000
droSec2
AATTAAT---AAGTGTCGATTA----------C---------------------------------------------------------------------------------------------------------------AAATGTAAATCAGATCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------TTTTTGGCTTGTTAATGTATTTATTAA-TGTATATTGTTAGTAATACAATTTCTAATTT---------------------------------------AAATT-----------------------------------TATTTTATTTAA------------------------------------GCTTGTG-----------------CTCTTTAAGTG-------------------CT-------TTTAAATTAGGT---T---GACACTGGC----TGACAT---------------ATTTTCAAT--C-TTTTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTACGGTGGTCATGGCAAGCGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTGCTACGGTGGTC...........1912.0020110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTGCTACGGTGGT............1811.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGTGTGCTACGGTGGT............1911.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGCTACGGTGGTCATGGCAAG...2511.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTGCTACGGTGGTCATGGCA.....2511.0011000
dm3
AATTAAT---AAGTGTAGATTA----------T---------------------------------------------------------------------------------------------------------------AAATGTAAATGAGATCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTTTATTGTGATTGTTTGGCTTGTTAATTTATTTATTAA-TGTATAGTGTTACTAATATAATTTCGAAT---------------------------CCAC--TTGTATTTAA-TT-----------------------------------TATTTT------------------------------------------ATTTAAG-----------------CTCTT-GGGTG-------------------CT-------TTTAAATTAGGT---T---GACACTGCC----TGACAT---------------ATTTTCAAT--C-TTTTTCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTACGGTGGTCATGGCAAGCGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTGCTACGGTGGTCATGGCA.....2412.0020000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGTCATGTGTGCTACGGT...............2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTGCTACGGTGGT............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATGCCAGGCCTACGGTC.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGATGCCAGGCCTACG................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGTGGTCATGGCAAGCG.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGGTCATGTGTGCTACGGTGGT............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTACGGTCATGTGTGCTAC..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGTCATGTGTGCTAC..................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTCATGTGTGCTACGGTGGTCATGGC......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGTGGTCATGGCAAGC..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGTGTGCTACGGTGGTCAT.........2311.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGTCATGTGTGCTACGGTGGT............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTCATGTGTGCTACGGT...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATGCCAGGCCTACGGTCATGTG........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGATGCCAGGCCTACGGTCAT...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGTGGTCATGGCAGC...1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
droEre2
TATTAAT---AACTAAAGGTTA----------T---------------------------------------------------------------------------------------------------------------AAATGTAAATGAGATTA------TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAGATTATTATGATTGTGTATCTTGGTAATATAATAAT-AAGTTGAT-TTCTTTGCAGATTTATTAGGAATTTTCTTTTCTTTTCCTTATTTCCTAGCCCTCATA----TTTAA-ACTTCTA------------------------------------------------------------------------------ACTTGTG-----------------CCCTTCAAGTA-------------------CT-------TTTAAATTGAGT---T---GACACTGCC----TGACAC---------------GTTTTCAAT--ATTTTTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGTTACGGTGGTCATGGCAAGCGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTGTTACGGTGGTCAT.........2111.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTGTTACGGTGGTCATG........2111.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGGTCATGTGTGTTACGGTGGT............2511.0010001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTGTTACGGTGGTCA..........2011.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTGTTACGGTGGTCATGGCA.....2411.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTGTTACGGTGGTCATGG.......2211.0010001000
droYak3
TATTAAT---AACTAAAGGTTA----------G---------------------------------------------------------------------------------------------------------------CAATGGAAATCAGCGCA------TT--------CCAAGATTATTTAA---TTTTTATTGGATATTTAAAAAA-----------------------------------------------------------------------------------------------------------------------------------------TTATATTTGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGA-------------ATTTCTTAGCCCTC--GTATATTTAA-CCTTGCA------------------------------------------------------------------------------ACTTGAG-----------------CTCTTTAAGTG-------------------CT-------TTTGAATTAAGT---T---GACACCGCC----TTACAT---------------ATTTTCAAT--C-TTTTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTACGGTGGTCATGGCAAGCGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGTGTGCTACGGTGGTC...........2011.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGTGTGCTACGGTGGTCAT.........2311.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGGTCATGTGTGCTACGGTGGTC...........2611.00100000010000
droEug1
TTTTTAC---TGCCTTCGAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTATAGAAATGCTTAAAGTAAAAAGTTAATTAAATTAG-----------------------------AAGTATTAATTGTTACATTAATATTTTGTATAAAATTAAGTTGCTTGAAATAATTCCTTTTAATTTTAATGATTTAAAATAATATTCAAATATTAGTATTGTATACATTTTAGTACTCATAAACAAACTAAATTGTAAACTAT----CTAAAATTAA-GT----------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTAC--------------------------------------CATG-TA------AATT------------TCCTT-AAAG-------------------CT-------CATAGTTTAAGA---C---AACACTGTT----TGACCAA---------TTCAAGTTTTCAATCTTATATTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTATGGTGGTCATGGCAAGCGCSizeHit CountTotal NormTotal
No Reads
droBia1
AATAAAA---TAGGCC---------------------------------------------------CACAGAAAAACATTTACGAAAAATAAATATATAAAATATATATATAATAAAATGGTACCA------------------------------------------------------------------------------------------------------------------TTATGATAAATATACTTTTTTTT----AGAAATTGGA-ATTATAGAAAA-------------------------------------------------------T----AAATTTTTAACTCATTTAA--------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------TATTTAAAGGGAAACAAACTAATTAAAATTAATGT---------------------------------------------------------------------------------------------------------------------------------TGGTTTTAGTTATACATATTTTTTATAATAAATAATTAT--------------------------------------TTTG-TT------AATA----------TCCTTATAAGAG-------------------TA-------TTAAACTTGAGG---A---AGCCCTGCT----TGACTTA---------TTAATT-TTTCAAT--CTTCTTGCAGAGGGATGCCAGGCCTTCGGTCATGTTTGCTACGGTGGTCATGGCAAGCGTSizeHit CountTotal NormTotal
No Reads
droTak1
AATTTTG---GGAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTT---------------------AGAATTTTTAATGTTTGCTATTAAATGTACCAAAAATAAATTTATTT----------------------------------------CT----------------------------------------------------------------------------------------------------ATTTAT-TGT------------------------------------------------------------------------------------TTTCTTTTTTTAAAGCATACATG----TTTTA-ACTTCAT--------------------------AA--ATTAAATGGTTATTTTATTTTTACTATATTAATTTTTTTGGCTGCCTTATTTATA-----------------CTCTTTAAAAG-------------------CT-------TTTGA--TGAGTTACCTTAAACTCTGCT----TGACTTA---------TTCACT-TTTCAAT--CTTTTTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTACGGTGGTCATGGCAAGCGCSizeHit CountTotal NormTotal
No Reads
droEle1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAAT--CATTTTGCAGAGGGATGCCAGGCCTACGGCCATGTGTGCTACGGAGGTCATGGCAAGCGCSizeHit CountTotal NormTotal
No Reads
droRho1
AATATCATTTTGATC-------AAAT-----------GTTTAC-----------------------------------------------------------------------------------TTTATATTATACTAAATTTATAGCCAA----------------------------------------------------------------------------------------------------------------------AATAGGAAATTCTAGAAAACTTTATTTTTAATTATTTTTTTTAACAATATGTATTTCAAAATTTTAAGATATTGCAAGAAAACTTCAAACTATTTATT--------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACTTAGG------------------------------------------------------------------------------------------------------------GTAATAAGACC----A--TTTTTATATTTAGCCGTACCTATTTATGAAATCGAATTCTTTT--------------------------------------CTTGACTTATC-----------------ATCTTTAATAG-------------------CT-------TCTAAGTCCAGG---C---AACGTTGCT----TGACTAA---------TTCATT-TTTCAAT--CATTTTGCAGAGGGATGCCAGGCCTACGGTCATGTGTGCTACGGCGGTCATGGCAAGCGCSizeHit CountTotal NormTotal
No Reads
droFic1
AATTGTT---AAATC--GTTT---------------------------------------------------------------------------------------------------------------------------TAAAGCCAATAAAATCGCTACTATTGACACTGATTAGGTCTATTA-ACTTTTTTTAATGAGTATCTAATATA---------------------------------------------------------------------------------------------------------------------------------------------ATTAATATTTGAGAA--ACGTA---------------------AGAATTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTGAG------------------------------------------------------------------------------------------------------------GCATCACGTAC----A--ATTTTAA------------------------------------------------------------------------------ATTCGAG-----------------CTGTTT-AAAG-------------------CT-------TCTTATTTAAGT---C---ATCACTGCT----TGAGTAA---------ATCATG-AATCGAC--TTTTTTGCAGAGGGGTGCCAGGCCTACGGCCATGTGTGTTACGGCGGTCATGGCAAGCGCSizeHit CountTotal NormTotal
No Reads
droKik1
AATTAAT---ATATT-------TGATTATTTATAAATGTTTATTTCAGTGTTATAAATATCAGAGACCCCAGA--------------------------------------------------------------------------------------------------------------CTATAAG------------------A--TTTTAATTCATTAATAAAATATTTTGGAATTTCT--------------------AAGTCAATT----------------------------------------------T------GTATTACAAAAAGT----TCATAAAATTATTTTTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGG-------------CATTATTAGCTTTA--AAAAATATAA-TTATGCA--------------------------------------------------------------------------TTTATCATTTC-----------------TACATTTAAGA-------------------CA-------TTAAAA--ATGTAAGC---ACCACTGCTGCTGTGACTAA---------CTCACTTTTTCAAA--T-CTTCACAGAGGGATGCCAAGCCTTCGGACATGTATGCTACGGCGGTCATGGCAAGCGTSizeHit CountTotal NormTotal
No Reads
droAna3
ACGA----------GGAGAATATATTC----------------TTAAGTACCATTTATTCCAAA--------------------------------------------------------------------AACCTTC-----CAATAAATTACCAATTA------TT--------CCAAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTAAATTCAGTTGG--------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTTTTAAAGTTTA--GATATAG-------------TATTTTATTAATGTATC------------------------------------------------------------------TAA---------------------------------------GTAATAAATAA-------------------------------------------------------AATTAAAAACTGGA-CTTATTGATAAATATTGGACACTGATTTAGCCGTTAAGTCTCACCTCTAGT---C---ATCTCTGTT----TAATTAA---------TTCACT-TTTCAAT--CCTTCTGCAGAGGGTTGCCAGGCCTTTGGCCATGTGTGTTACGGTGGACATGGCAAGCGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCCATGTGTGTTACGGTGGA............2512.002010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTTACGGTGGACATGGC......2111.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTGTTACGGTGGACATGGCA.....2511.001000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTGTTACGGTGGACAT.........2111.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCATGTGTGTTACGG................1811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTGTTACGGTGGACATG........2111.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTGTTACGGTGGAC...........1911.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTTACGGTGGACATG........1911.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTGTTACGGTGGACAT.........2011.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTTACGGTGGACATGGCAAGC..2511.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTGTTACGGTGGACATGGCAAG...2611.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTTACGGTGGACATGGCAAG...2411.001000010
droBip1
AATTAAA---AGAAATCGATTC---------------------------------------------TCCAAT--------------------------------------------------------------------------------------------------------------TTGAAAA------------------A--TTTTATATT---TTCAAAATATTTAAGCATTTCTGTCAAATATTTTTTCGTTTAAAGAGAAAT----------------------------------------------T------GAAACCCCAAAGAA----TCAAAAAATTTTAAATTAATTTGA--------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTAATGTAGAT-GGGT---------------TCCTCATTTTATAAATGCATT------------------------------------------------------------------CAT---------------------------------------GTAATAAATAATTTTTTTTAA------------------------------------GTTTGTG--AACT-AGAACTGG---------------------CACGGTTTTAGCTATTAAATCTCACCTCCAGT---C---ATCACTGTT----TAATTAA---------TTCACT-TTTCCAT--CCTTCTACAGAGGGTTGTCAGGCCTTTGGCCATGTGTGCTACGGTGGACATGGCAAGCGCSizeHit CountTotal NormTotal
No Reads
dp5
TGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAA-TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTCGATCTTCACC-CTCCCA---C-TCTTACAGAGGGATGCCAGGCCTACGGCCATGTGTGCTATGGGGGCCACGGCAAGCGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTGCTATGGGGGC............1811.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTGCTATGGGGGCCACGG.......2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATGTGTGCTATGGGGGCCACGG.......2611.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATGTGTGCTATGGGGGC............2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGGCCATGTGTGCTATGGGGG.............2411.0010100000000
droPer2
TGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAA-TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTCGATCTTCACC-CTCCCA---C-TCTTACAGAGGGATGCCAGGCCTACGGCCATGTGTGCTATGGGGGCCACGGCAAGCGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AACCTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTTGC--------ATTTTTGGTCTTTTTCTACAGAGGGCTGCCAGGCCTATGGGCATGTCTGTTACGGCGGCCATGGCAAACGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCAGGCCTATGGGC.............................1811.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGGGCATGTCTGTTAC..................1911.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGGGCATGTCTGTTACGGC...............2211.00100010
droVir3
TATCAAT---TTATT-------TAATA---------------------------------------------------------------------------------------------------------TTCTCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAAGTTGGAATCATAAATTATTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTTAA------------------------------------ATTTTTACTTATT-----------TAATTAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------AATTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TTTATTT---TGATT-------TAATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------TCA---TTTTACTTTGATTTA--TTTTATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATTTT---------------------------------------ATTT------------------------------------TATTTTATTTTA------------------------------------TTTTATTTTTATT-----------TTAT-----------------------------------------------------------------------------------------------------------------------------------------------------TATTATTTTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACAGAGGGCTGCCAGGCTTATGGACACGTCTGTTACGGCGGACATGGGAAACGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGACACGTCTGTTACGG................2011.00101
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACACGTCTGTTACGGCGGACAT.........2511.00110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTCTGTTACGGCGGA............1811.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGACACGTCTGTTACGGC...............2011.00101
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTACGGCGGACATGGGAAACGC2611.00110
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGGCGGACATGGGAAAC..2011.00101
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTACGGCGGACATG........1811.00110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTTACGGCGGACATGGGAAACG.2611.00101
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTATGGACACGTCTGTTACGGC...............2411.00110
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGGCGGACATGGGA.....1811.00101
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCCAGGCTTATGGA..............................1811.00110

Generated: 05/18/2015 at 01:24 PM