| droSim2 |
2l:12983758-12984059 + |
dsi_17943 |
CGTCTAACAGTTCT--------------------AA--AT-GCCT-AGC---TCAGGCACTGACAACGGA---AA-----CTC-AAGTTAGA--------------------------------------------------------------------------------------------------------GAAATAATTTTCAAAGCCTACGTGATT-------------TAAATTCCCAGAATAGCTTATAAGAGTTAAGAATATTAAAATTGCTAGTTTCAATACTTAATACAACGCTTGCTTTATACATT------------------TTTATAAATTTTTAGCCATTTATA----G-------------------------------------------------------------------------------------------------------------------CTGTTTATTTTATAGC-TACCAGCGCTGAC---------------------------------TT------TT----------------TACGGA---------AAGTGGCAACTCTCTTTCACAGCTGATA----------ATTCGGTCTGCCTTT--TGTAAATT-TTG-CT----TATCCAGCAAATTTAG |
| droSec2 |
scaffold_16:1524607-1524908 + |
|
CGTCTAACAGTTCT--------------------AA--AT-GCCT-AGC---TCAGGCACTGACAACGGA---AA-----CTC-AAGTTAGA--------------------------------------------------------------------------------------------------------GAAATAATTTTCAAAGCCTACGTGACT-------------TATATTTTCAGAATAGCTTATAAGAGTTAAGAATATTTAAATTGCTAGTTTCGATACTTAATACAACGCTTGCTTTATA-ATT------------------TTTTTAAATTTTTAGCCATTTATA----G-------------------------------------------------------------------------------------------------------------------CTTTTTATTTTATAGC-TACCAGCGCTGAC---------------------------------TT-----TTT----------------TACGGA---------AAGTGGCAACTCTCTTCCACAGCTGATA----------ATTCGGTCTGCTTTT--TGTAAATT-TTG-CT----TATCCAGCAAATTTAG |
| dm3 |
chr2L:13366204-13366510 + |
|
CGTCCAACAGCTCT--------------------AA--AT-GCATGAGCTGTACTGAAAATGACAACAAA---AA-----CTC-AAGCTAAT--------------------------------------------------------------------------------------------------------GAAATAATTTTCAAAGAATAAAATAAAGAAAAAAAGAATA-----------------------ATAAAAAGAATATTTAAATTGCTAGTTTTGATACTTCATGAAACGCTTGCTTTATACATTTTAATACAAT--------TTTATATATTTTTAGCCATTTATA----G-------------------------------------------------------------------------------------------------------------------GTTGTTATTTTATAGC-TACCAGCGCTGAC---------------------------------TT-----CTT----------------TACGGA---------AAGTGGCAACTCTCTTCCACAGCTGATA----------ATTCGGTCTGCTTTT--TGTAAATT-TTG-CT----TGTCCAGCAAATTTAG |
| droEre2 |
scaffold_4929:12074584-12074918 - |
|
CGTCTAACAGCCCT--------------------GT--AT-CGCAACACTACACTGAAAATGACAACAGA---AA-----GTC-AAGC--------------------------------------------------------------------------------------------------TTTGTATAAAGAACTTATTTTCAAAGCATACGTGATT-------------TAACTT-CTAAAATAACTGATAAAAGCTAGAAATATTGTAATTACTAGTTTCGATATTTAAAGAA-AGGTTACCTTAT---------------------------TATATGCTTAGCGACTTATA----G-------------------------------------------------------------------------------------------------------------------CTTTTTATTTTATAGC-TACCAGCACTGATTTCTACACGACTAGTGGCAACTCCAGCACCGACTT-----TTT----------------CACGCA---------TAGTAGCAACTCTATTCCACAGCTGATA----------ATTCGGTCTGCTTTT--TATAAATT-TTG-CT----TTTCCAGCAAATTTAA |
| droYak3 |
2L:9805381-9805675 + |
|
TCTCAAACAGCCCT--------------------GA--ATTGCC-ACACTGTTCAGAAA-TGAAAATCAAACTAA-----CTT-AACTTAAG--------------------------------------------------------------------------------------------------------AAACTTATTTTCAAAGCATACGTGATT-------------TAAATTCCCTTAATAGCTGAATACAGTTAGGAATATTTAATTTGTTCGTTTCAATATTTAATGAAATG-TTATTTTAT----------------------------AAATGTTAG---GTTTCTA----G-------------------------------------------------------------------------------------------------------------------CTTTTTATTTTATAGC-TACCATCACTGAC---------------------------------TT-----CTT----------------CCCGCT---------TAGTGGCAACTCTCTTCCACAGCTGACA----------ATTCGGTCTGCTTTT--TATAAATT-GTG-CT----TTTCCAGCAAATTAAG |
| droEug1 |
scf7180000409554:28196-28466 - |
|
GCTTTGTCAGCCCT--------------------GA--TT-TCTC-----------------------------------TTTGAAAAAGCATCAACCC---------------------------------AT-TACTATTAACAGAACACCAACC-----------------------------TTTCTAAAAA-------------------------------------------------------GC-------------------------TGTTATTTTTGATGT--TATGCTGCATTTATT--------------------------------------------------------------------------------------------AAAAAAGTTTTCATTTTTTATTCATGTACATGTTGT--ACATGCATCGATGTATGTATGT-------------------AGTATTTTTTAGTAGC-TGACTACACAGGC---------------------------------CCG----TTT----------------CGCATA---------TACTGGCAACACTCTTCCCCAGCTGATA----------ATCCGGTCTGCTTTT--TATAAATT-TGA-TT----AT-TAAAGAA------ |
| droBia1 |
scf7180000302408:2986562-2986861 - |
|
AACCTATCGGTGATGCCAGAA-------------------------AGG---AAAGGCGTAAGCAATGTG---ATGTTTTCCT-AATCTATAGAAATGGTTTTTGAAACTGTCTTTCGGAGCATTTTAAGCCAT-TAATGAAAAAATAACGACAACATATTTTGCCCATAAATTTGGT-------------------------------------------------------------------------------------------TATCCA--------------------------------------------------------------------------------------TTTAGCTAGTTTTTAAACAAGCTAGTTTTAG-----------------------------------------------------------------------------------------CTT-----TTTGTGGC-TGCCAGCGTTGAC------AT------------------AT------T-----CAT----------------CTCGCTTTGACAACAGTCTGGCAGCACTCTTCC-CAGCTGATA----------ATTCGGCCTGCCTTT--CATAAATT-TAT-CT----ATTCAGGAATATCAAG |
| droTak1 |
scf7180000415287:357365-357498 + |
|
TAACTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTACATCTGG-------------------------------------------------------------------------------------------------------------------CTTTT---TTTTAAGC-TGCCATCACTTAC------AC------------------ATTT-----GCATTTTT----------------CAACTA---------GTCCGGCAACGCTCTTTC-CAGCTGATA----------ATTCGGCCTGCCTTT--TATAAATT-TTG-CT----ATTCAGGAAAATTGAG |
| droEle1 |
scf7180000491338:976896-977214 + |
|
CGTTTATCGATGCT--------------------AT--CG-ATGT-TGC---CAGAGATTTGACAGCG--------TTTTCCC-AGCCGGCATCGACTA------------------------------------------------------------------------------TTTTCGAGTTTTAATAAAAAAATTT---ATTAAATAATTCA--------------------------------GGCTATTAAGA------------------------------GTTTTGTGCGACCTTTATTTTG--AATTTTTATAATATTTTAAATA-------AGTTTTAGCAATTTA--------------------------------------------AATTCG------TTTTTTATTAAAATAATTATAATCACCATGGAAAG-------------------------------A-TTTAATTTTGCGGCTTACCAACACTGTC---------------------------------TA-----GGG----------------AACGTC---------GCTTGGCAACACTCTTCCCCAGCTGATA----------ATTCGGTCTGCTTTT--TATAAATTTTTG-CT----AT-TTAGTAAA----- |
| droRho1 |
scf7180000776564:6923-7235 + |
|
TATCGATGT----TGCCAGAGATTTGACAGCATCGATA--------------------------------------TTTTCCT-AGCAGGCATCGACTATTTTCA-------C-----------------------------------------------TTGG-CCTAC--TATTTTTTTGAA-------T----ATGTAAATTATAAAACAATTAAATACGCAGTAAAAGAACA-----------------------AA-----------------------------------------GGTTTTTCTTC--TAATTCCAAAA-----------------TATTTTTGGTGAATTGAA----A--------------------------CT----TTTTAAGAGCGTTACTATTATT----------ATTTTAA-AAGTAAGAAAAT--------------------------------------------ATT-TAT----------------TC------------------CTTG-----CATTTTCCAACACT--GTTCAGAAAAGGTC---------GCTTAGCAACACTCTTCTCCAGCTGATA----------ATTCGGTCTGCTTTT--TATAAATT-TTG-AT----AT-TCA---------G |
| droFic1 |
scf7180000453925:627913-627980 - |
|
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAACACTCTTCCCCAGCTGATA----------ATTCGGCCTGCATTT--TATAAATT-TTG-CA----AC-CTAGAAAATTTAA |
| droKik1 |
scf7180000302382:580375-580434 - |
|
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGCTGATA----------A-TCGGCCTGCTTTT--TTTCAATT-TACTCAATTTTTCTCGGTAAATTAAT |
| droAna3 |
scaffold_12943:2017285-2017365 + |
|
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------CGCATG---------AAACGGCTGTACTCTTTC-CAGCTGATTGGCATAAAACATTCGACCTGCTTTT--ATTCAATT-TA-------------AACAGATTTCT |
| droBip1 |
scf7180000396728:1232434-1232522 - |
|
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------TGCATA---------AAACGGCTGTACTCTTTC-CAGCTGATCGGCATAAAACATTCGACCTGCTTTT--ATTCAATT-TAAACAGT--TT-TCTGTAAATTC-- |
| dp5 |
4_group1:2218639-2218926 - |
|
CGTTTAACAACACG--------------------GTAATT-GTCA-GTA---TTAATTGCGGAAAAGGTA---CA-----TTC-G---------------------------CTTAAGGTACGTTTGATGCCCCACAATGGTTAATATTCGTAAACCTGCATGG-GCATG--TATTATTTTCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAATATACTTATACAAAGGTATATTTAAAGTATTA---------------------------------------------------------AAACTGCATTGATTTATAAAAACTTA-------------ATC-TAC----------------TC------------------GTTC-----GATTTCCG----------------CACGCC---------GCTTACCAACACTATTCC-CAGCTGATA-TAATAAAAAATACAGCTTGCTTTT--ATTTCATT-TTA-CA----TT-TCAATAAATTAAA |
| droPer2 |
scaffold_5:3030423-3030710 + |
|
CGTTTAACAACACG--------------------GTAATT-GTCA-GTA---TTAATTGCGGAAAAGGTA---CA-----TTC-G---------------------------CTTAAGGTACGTTTGATGCCCCACAATGGTTAATATTCGTAAACCTGCATGG-GCATG--TATTATTTTCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAATATACTTATACAAAGGTATATTTAAAGTAATA---------------------------------------------------------ACACTGCATTGATTTATAAAAACTTA-------------ATC-TAC----------------TC------------------GTTC-----GATTTCCG----------------CACGCC---------GCTTACCAACACTATTCC-CAGCTGATA-TAATAAAAAATACAGCTTGCTTTT--ATTTCATT-TTA-CA----TT-TCAATAAATTAAA |
| droWil2 |
scf2_1100000004521:5406712-5406722 - |
|
AGCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAA |
| droVir3 |
scaffold_12723:3391085-3391286 - |
|
AAAAAT-----TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTA------------------------------ATGTTA--AATTTATAATATAGTTTTAATA-------CAATTTAACGGAAAC-ACGTC--------------------------------------GATTCG------TTGTTCATT---------------------------------------------TACAA-------AAAATTTTATTATTCA-GATTAGTACCGGC---------------------------------TT------TTAATACTAAATTTAAATAACGTT---------GCTGGGCATCACTTTTTCCCAGCTGACA----------TTCTAAATAGCAATTTCCACAAAAT-TGG-CT----TT------AAAATTAC |