dsi_17940

CAAGGGAGCTGTTGGCTACTACGAATGGTCGAAGGAGAACTACCAGGATAGTAAGTGCTACTTGCCTTTAGCATCATATATCTTTGCTGAAACCTCTTTTGAATCTTTAAGGTGACTTGCCCTGGATTTTCCAGACCTGCAGCGAGTTCGGATGGTTCCAG ************************************************..........(((...(((((((...........))))))).................)))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M024 male body	M053 female body	M025 embryo	O001 Testis	O002 Head	SRR553486 Makindu_3 day-old ovaries	SRR902009 testis	GSM343915 embryo	SRR553485 Chicharo_3 day-old ovaries	SRR553487 NRT_0-2 hours eggs	SRR618934 dsim w501 ovaries
.............................CGAAGGAGAACTACCAGGA.................................................................................................................	19	0	1	3.00	3	1	1	0	1	0	0	0	0	0	0	0
........CTGTTGGCTACTACGAAT.......................................................................................................................................	18	0	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0
.....................................................................................................................................GACCTGCAGCGAGTTCGGAT........	20	0	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
...............CTACTACGAATGGTCGAAG...............................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................ACCTGCAGCGAGTTCGGATG.......	20	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
................................................................................................................................TTCCAGACCTGCAGCGAGTTCGGA.........	24	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................GACCTGCAGCGAGTTCGGATG.......	21	0	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................TCCAGACCTGCAGCGAGTTCGGA.........	23	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................CCTGCAGCGAGTTCGGAT........	18	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
................................AGGAGAACTACCAGGATA...............................................................................................................	18	0	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
.............................................................................................................................ATTTTCCAGACCTGCAGCGAGTT.............	23	0	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0
.....GAGCTGTTGGCTACTACGAATG......................................................................................................................................	22	0	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
................................................................................................................................TTCCAGACCTGCAGCGAGTTCGGATG.......	26	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.....................CGAATGGTCGAAGGAGAAC.........................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................ATTTTCCAGACCTGCAGCGAGTTCGGAT........	28	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................AGGAGAATTATCAGGATA...............................................................................................................	18	2	4	0.25	1	0	0	0	0	0	1	0	0	0	0	0
........................................................................ATCAGATATGTTTGCTGAACC....................................................................	21	3	5	0.20	1	1	0	0	0	0	0	0	0	0	0	0
...............................AAGGATAATTACCAGGAT................................................................................................................	18	2	11	0.09	1	0	0	0	0	0	0	0	0	1	0	0
.......................AGTGGTCGAAGGAGCAC.........................................................................................................................	17	2	13	0.08	1	0	0	0	0	0	0	0	0	0	1	0
...............................................................................ATCTTTGCTGAAACT...................................................................	15	1	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1

GTTCCCTCGACAACCGATGATGCTTACCAGCTTCCTCTTGATGGTCCTATCATTCACGATGAACGGAAATCGTAGTATATAGAAACGACTTTGGAGAAAACTTAGAAATTCCACTGAACGGGACCTAAAAGGTCTGGACGTCGCTCAAGCCTACCAAGGTC ************************************************..........(((...(((((((...........))))))).................)))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553488 RT_0-2 hours eggs	SRR618934 dsim w501 ovaries	SRR553485 Chicharo_3 day-old ovaries	SRR553487 NRT_0-2 hours eggs	SRR902008 ovaries	M024 male body
......................................................CACGATGAACGGAAA............................................................................................	15	0	1	1.00	1	0	0	1	0	0	0
...................ATGCTTTCCAGCTTCCACT...........................................................................................................................	19	2	1	1.00	1	1	0	0	0	0	0
....................................................................................................CTTAGAAATTCCACTGAACGGGACCT...................................	26	0	1	1.00	1	0	1	0	0	0	0
...................ATGCTTTCCAGCTTCC..............................................................................................................................	16	1	3	0.67	2	2	0	0	0	0	0
.................TTATGCTTTCCAGCTTCCAC............................................................................................................................	20	3	4	0.25	1	1	0	0	0	0	0
.................................................................................GAAAAGACTTTGGAGAA...............................................................	17	1	4	0.25	1	0	1	0	0	0	0
..........................................................................................................AATTGCACTGAGCGGGA......................................	17	2	5	0.20	1	1	0	0	0	0	0
...................ATGCTTTCCAGCTTCCA.............................................................................................................................	17	2	11	0.09	1	1	0	0	0	0	0
................................................................................................................................AAGGTCTGGACGTGG..................	15	1	11	0.09	1	0	0	0	1	0	0
......................CTTAGCAGCTGCATCTTGA........................................................................................................................	19	3	15	0.07	1	0	0	0	0	1	0
............................................................................................................................CTAAAAGGTCTGGAAGTGA..................	19	3	20	0.05	1	0	0	0	0	0	1
........................................AGGGTCCCATCATTCTCG.......................................................................................................	18	3	20	0.05	1	0	0	0	1	0	0
.........................................................................................................AAATTTCACTGAACG.........................................	15	1	20	0.05	1	0	1	0	0	0	0

Species	Coordinate	ID	Alignment
droSim2	3r:6038948-6039108 -	dsi_17940	CAAGGGAGCTGTTGGCTACTACGAATGGTCGAAGGAGAACTACCAGGA---TAGTAAGTGCTACTTGCCTTTAGCATCATATATC---------TT----------TGC-----TGA------------------AA---C-------------CT---CTTTTGAATCTTTAAGGTGACTTGCCCTGGATTTTCCAGACCTGCAGCGAGTTCGGATGGTTCCAG
droSec2	scaffold_25:548080-548243 -		CAAGGGAGCTGTTGGTTACTACGAATGGTCGAAGGAGAACTACCAGGA---TAGTAAGTGCTACTTGCCTTCAGCATCATATATC---------TT----------TGC-----TGA------------------AA---C-------------CTTTTGTTTTGAATCTTTAAGGTGACTTGCCCTGGATTTTCCAGACCTGCAGCGAGTTCGGATGGTTCCAG
dm3	chr3R:15220281-15220444 +		TAAGGGAGCTGTTGGCTACTACGAATGGTCTAAGGAGAACTACCAGGA---TAGTAGGTGCTACTTGCTTTTAGCATCATATATC---------CT----------TGT-----TAA------------------AA---C-------------CTATCTTTTTGACTCTTTAAGGTGACTTGCCCTGGATTTTCCAGACCTGCAGCGAGTTCGGATGGTTCCAG
droEre2	scaffold_4770:6414049-6414212 -		CAAGGGAGCAGTTGGCTACTACGAATGGTCCAAGGAGAACTACGAAGA---TAGTACGTGATTTCTAGTTTCAGCATCGTATAAC---------TT----------TGT-----AAT------------------AA---C-------------CTAACTTTTTAACTCTTTTAGGTGACTTGCCCTGGATCTTCCAGACCTGCAGCGAGTTCGGTTGGTTCCAG
droYak3	3R:3948877-3949039 +		CAAGGGATCTGTTGGCTACTACGAATGGTCTAAGGATAACTACCAAGA---TAGTACGGGGTTTTTATTTTAAGCATAATATAAC---------TT----------TGT-----TAT------------------AA---CTAAG--------------TTTTTAACTCTTTTAGGTGACTTGCCCTGGGTTTTCCAGACCTGCAGCGAGTTCGGATGGTTCCAG
droEug1	scf7180000409804:1495771-1495927 +		CAAGGGAGCTGTGGACTACTACGAATGGTCCAAGGAGAACTACGAAGA---TAGTAAGTGAATATAACTGATAGCATCTTGAAAC---------CA----------TGC-----TAA----AAACG------------------------TAT-------------CCTCTTTAGGCGACTTGCCTTGGATTTTCCAGACCTGCAGCGAGTTTGGATGGTTCCAG
droBia1	scf7180000302402:988059-988225 +		CAAAGGAGCTGTGGAGTACTACGAGTGGTCCAAGGAGAACTACGAAGA---TAGTATGTATCTCGAAAG------TTAAAATAT-T-------------------------------GACGAAGACGATGT-TT-TAA--TATGTTTTCCCAC-------------ACCTTTTAGGCGACTTGCCTTGGATTTTCCAAACCTGCAGCGAGTTCGGATGGTTCCAG
droTak1	scf7180000410451:253310-253477 +		TAATGGAGCTGTGGGCTACTATGAATGGTCTAAGGAGAACTACGAAGA---CAGTGAGTTTTAA---CTTTTAATATAAAAT-----------------------------------ATAAAATAATAATAATT-TAA--TATATCTTTCTAC-------------CCTTTTTAGGCGACTTGCCCTGGATCTTCCAGACCTGCAACGAGTTCGGTTGGTTCCAG
droEle1	scf7180000490994:1011439-1011610 +		CCAAGGAGCTGTGGACTACTACGAATGGTCCAAAGAGAACTACGAAGA---CAGTAAGTGGTTTTACCTTCTAAAGCAA----TCTTTTTTGAA--TAAG------TGT-----TAT------------------TAATG--ACATTTTTCAT-------------CCTTTTTAGGCGACTTGCCATGGATTTTCCAGACCTGCAGCGAGTTCGGATGGTTCCAA
droRho1	scf7180000771335:31037-31208 -		CAATGGAGCTGTAGACTACTACGAATGGTCCAAGGAGAACTACGAAGA---CAGTAAGTGGTTTTAACATCTAAATCAT----TCTCATTTGAA--ACCA------TTT-----TTT------------------AAACG--ACTTTTTCCAC-------------CCTCTTTAGGCGACTTGCCCTGGATTTTCCAGACCTGCAACGAGTTCGGATGGTTCCAA
droFic1	scf7180000454126:211480-211640 +		CAACGGAGCGGTGGGATACTACGAATGGTCCAAGGAGAACTACGAAGA---CAGTAAGTGATTTTAACTTAAAGTTTAC----TC---------TT----------TTT-----TAT------------------AACCG--ACATTTTCCTC-------------TCTTTTAAGGCGACTTGCCTTGGATTTTCCAGACCTGCAACGAATTCGGATGGTTCCAA
droKik1	scf7180000302707:449848-450008 +		CAAAGGAGCTGTGGGCTACTATGAATGGTCCAAGGAAAACTACGAAGA---TAGTAAGCCTTCACTC---TGT--TTAAATCAT---------------------------------TTCTGATGCTA--------ACAG--ATAATTTTCTC-------------TCTCCACAGGCGATCTGCCTTGGATCTTCCAGACCTGCAGCGAGTTCGGTTGGTTCCAA
droAna3	scaffold_13340:15168663-15168821 -		CGACGGAACTACTGGATATTATGAATGGGCCAAGGATAACTACGAAGA---TAGTAAGTCTTGCACAAA-----------AAAA-TAAAGT---------------------------------------------TT--AGGCAA---ACATTCCTTAACAAAA-AAAAATCAGGCGATCTGCCCTGGTTCTTCCAGACCTGCAGCGAGTTCGGCTGGTTCCAG
droBip1	scf7180000396708:4860457-4860609 +		CGACGGAACTACGGGATACTATGAATGGTCCAAGGACAACTACGAAGA---TAGTAAGTACTTCAAGAA------ACAT------TCAATTGAC--ACATTT----TCTAATAA---ACAA------------------------------------------------AATCAGGCGACCTGCCCTGGTTCTTCCAGACCTGCAGCGAGTTCGGATGGTTCCAG
dp5	2:29682524-29682689 +		TAAGGGCACCGTCAACTACTACAAATGGGCCAAGATAAACTATGAAGACGACAGTGAGTGATATTCT---G-----------------AAA----------------------G---GAAGAAGCCTATCCCTT-------------TCTCATCCCTTTCCCTTG-TGTTCTCAGGCGGTCTTCCCTGGATATATCAGACTTGCAGCGAATTTGGTTGGTACCAG
droPer2	scaffold_6:5054011-5054176 +		TAAGGGCACCGTCAACTACTACAAATGGGCCAAGATAAACTATGAAGACGACAGTGAGTGATATTCT---G-----------------AAA----------------------G---GAAGAAGCCTATCCCTT-------------TCTCATCCCTTTCCCTTG-TGTTCTCAGGCGGTCTTCCCTGGATATATCAGACTTGCAGCGAATTTGGTTGGTACCAG
droWil2	scf2_1100000004943:4007767-4007930 +		CAA-GGAGCCGTAGACTACTACAAATGGTCCATGGACAACTATCAAGG---CAGTGAGTATCTCACAAG-----------AACT-TTAACATTT--ACAATTAATTAAC-----T--------G------------------CTTCAC-----------TTAATC-AATATTCAGCTGGCATTGCATGGACTTATCAAACTTGCAACGAATTCGGTTGGTTCCAA
droVir3	scaffold_13047:16406341-16406498 -		TAAGGGAACTGTTGCCTATTACAAATGGTCAATGGACAACTACGATGG---TTGTAAGTATATACTGGC------ATAACAAAT-T-----GACCA----------AGT---------------------------AA--AGTAAATCATTTC-------------TTCTCTTAGCTGGTCTTGCTTGGTTCTATCAAACATGCAGAGAATTTGGCTGGTTTCAA
droMoj3	scaffold_6540:12723281-12723444 -		TCAGGGAACTGTTGATTATTACAAATGGTCCAAAAATAACTACGATGG---TTGTGAGTAAAACCTC---A-----------------ATAGAC--ACTGTTAGTTAGT--TAA---ATATAAG------------------CCTTATTCTTT-------------CCTTCTTAGCTGGCCTCGGTTGGTTCTACCAAACATGCAGACAATTTGGTTGGTTCCAA
droGri2	scaffold_15116:1334065-1334230 -		TAAAGCAACTGTTAAATATTACAAGTGGGCAATGCATAACTATGATGG---TTGTAAGTGACACCTT---GTTAAATGA----A-T-------------------------------GATGAATACTAAGT--CTGA---CGAATCAAATAAC---T---------CTTTCTTAGCTGGTCTCAGCTGGTTCTTTCAAACATGCAACGAATTCGGCTGGTACCAA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

CAAGGGAGCTGTTGGCTACTACGAATGGTCGAAGGAGAACTACCAGGA---TAGTAAGTGCTACTTGCCTTTAGCATCATATATC---------TT----------TGC-----TGA------------------AA---C-------------CT---CTTTTGAATCTTTAAGGTGACTTGCCCTGGATTTTCCAGACCTGCAGCGAGTTCGGATGGTTCCAG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.............................CGAAGGAGAACTACCAGGA---..............................................................................................................................................................................	19	1	3.00	3	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0
........CTGTTGGCTACTACGAAT.......................................................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGAT........	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............CTACTACGAATGGTCGAAG...............................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................ACCTGCAGCGAGTTCGGATG.......	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TTCCAGACCTGCAGCGAGTTCGGA.........	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGATG.......	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................................................TCCAGACCTGCAGCGAGTTCGGA.........	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGAT........	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................AGGAGAACTACCAGGA---TA............................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................ATTTTCCAGACCTGCAGCGAGTT.............	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.....GAGCTGTTGGCTACTACGAATG......................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TTCCAGACCTGCAGCGAGTTCGGATG.......	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................CGAATGGTCGAAGGAGAAC.........................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................ATTTTCCAGACCTGCAGCGAGTTCGGAT........	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................ATC---------TT----------TGC-----TGA------------------AA---C-------------T......................................................................	15	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droSec2

CAAGGGAGCTGTTGGTTACTACGAATGGTCGAAGGAGAACTACCAGGA---TAGTAAGTGCTACTTGCCTTCAGCATCATATATC---------TT----------TGC-----TGA------------------AA---C-------------CTTTTGTTTTGAATCTTTAAGGTGACTTGCCCTGGATTTTCCAGACCTGCAGCGAGTTCGGATGGTTCCAG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..............GTTACTACGAATGGTCGAAGGA.............................................................................................................................................................................................	22	1	25.00	25	0	25	0	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGATGGTT....	21	1	11.00	11	0	11	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGATGGTT....	24	1	7.00	7	1	6	0	0
.............................CGAAGGAGAACTACCAGGA---..............................................................................................................................................................................	19	1	6.00	6	1	5	0	0
..............GTTACTACGAATGGTCGAAGGAGA...........................................................................................................................................................................................	24	1	6.00	6	0	6	0	0
CAAGGGAGCTGTTGGTTACT.............................................................................................................................................................................................................	20	1	5.00	5	0	5	0	0
....GGAGCTGTTGGTTACTACGAATGGT....................................................................................................................................................................................................	25	1	4.00	4	0	4	0	0
.............................CGAAGGAGAACTACCAGGA---TAGT..........................................................................................................................................................................	23	1	4.00	4	0	4	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGATGGTTC...	25	1	4.00	4	2	2	0	0
....GGAGCTGTTGGTTACTACGAATGGTC...................................................................................................................................................................................................	26	1	3.00	3	0	3	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGATGGT.....	23	1	3.00	3	0	3	0	0
...............TTACTACGAATGGTCGAAGGAGA...........................................................................................................................................................................................	23	1	3.00	3	0	3	0	0
...............TTACTACGAATGGTCGAAGGA.............................................................................................................................................................................................	21	1	3.00	3	0	2	0	1
.............................CGAAGGAGAACTACCAGGA---T.............................................................................................................................................................................	20	1	3.00	3	0	3	0	0
...........................GTCGAAGGAGAACTACCAGGA---..............................................................................................................................................................................	21	1	3.00	3	0	3	0	0
......................GAATGGTCGAAGGAGAACTACCAGGA---..............................................................................................................................................................................	26	1	2.00	2	0	2	0	0
.............GGTTACTACGAATGGTCGAAGGA.............................................................................................................................................................................................	23	1	2.00	2	0	2	0	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGATGGTT....	22	1	2.00	2	0	2	0	0
........................ATGGTCGAAGGAGAACTACCAGG..................................................................................................................................................................................	23	1	2.00	2	1	1	0	0
............................................................................................................................................................................................GATTTTCCAGACCTGCAGCGA................	21	1	2.00	2	0	2	0	0
CAAGGGAGCTGTTGGTTACTACGAAT.......................................................................................................................................................................................................	26	1	2.00	2	1	1	0	0
..........GTTGGTTACTACGAATGGTCGAAGGAGA...........................................................................................................................................................................................	28	1	2.00	2	0	2	0	0
............................................................................................................................................................................................................AGCGAGTTCGGATGGTTCC..	19	1	2.00	2	1	1	0	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGATGGTTCCA.	25	1	2.00	2	0	2	0	0
....................................................................................................................................................................................................AGACCTGCAGCGAGTTCGGATGGTT....	25	1	2.00	2	0	2	0	0
............TGGTTACTACGAATGGTCGAAGGAGA...........................................................................................................................................................................................	26	1	2.00	2	0	2	0	0
......................GAATGGTCGAAGGAGAACTACCA....................................................................................................................................................................................	23	1	2.00	2	0	2	0	0
..............GTTACTACGAATGGTCGAAG...............................................................................................................................................................................................	20	1	2.00	2	0	2	0	0
..........GTTGGTTACTACGAATGGTCGAAGGA.............................................................................................................................................................................................	26	1	2.00	2	0	2	0	0
CAAGGGAGCTGTTGGTTACTACGA.........................................................................................................................................................................................................	24	1	2.00	2	0	2	0	0
..............GTTACTACGAATGGTCGAAGG..............................................................................................................................................................................................	21	1	2.00	2	0	2	0	0
.................ACTACGAATGGTCGAAGGAGA...........................................................................................................................................................................................	21	1	2.00	2	0	2	0	0
..........................GGTCGAAGGAGAACTACCAGG..................................................................................................................................................................................	21	1	2.00	2	2	0	0	0
............................................................................................................................................................................................................AGCGAGTTCGGATGGTTCCA.	20	1	2.00	2	0	2	0	0
...................................................................................................................................................................................................CAGACCTGCAGCGAGTTCGGATGGTT....	26	1	2.00	2	0	2	0	0
..........GTTGGTTACTACGAATGGTCGAAGGAG............................................................................................................................................................................................	27	1	2.00	2	0	2	0	0
.....GAGCTGTTGGTTACTACGAATGGTC...................................................................................................................................................................................................	25	1	2.00	2	0	2	0	0
.........TGTTGGTTACTACGAATGGTCGAAGG..............................................................................................................................................................................................	26	1	2.00	2	0	2	0	0
....................ACGAATGGTCGAAGGAGAACTACCA....................................................................................................................................................................................	25	1	2.00	2	0	2	0	0
............................TCGAAGGAGAACTACCAGGA---TAGT..........................................................................................................................................................................	24	1	1.00	1	1	0	0	0
................TACTACGAATGGTCGAAGGAGA...........................................................................................................................................................................................	22	1	1.00	1	0	1	0	0
.............GGTTACTACGAATGGTCGA.................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0
........CTGTTGGTTACTACGAATGGTCGA.................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0
.AAGGGAGCTGTTGGTTACTACGAATGGT....................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0
............TGGTTACTACGAATGGTCGAAGGA.............................................................................................................................................................................................	24	1	1.00	1	0	1	0	0
..............................GAAGGAGAACTACCAGGA---..............................................................................................................................................................................	18	1	1.00	1	1	0	0	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGATGGTTCC..	24	1	1.00	1	0	1	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGATG.......	21	1	1.00	1	1	0	0	0
.................ACTACGAATGGTCGAAGGAGAACTACC.....................................................................................................................................................................................	27	1	1.00	1	0	1	0	0
................................................................................................................................................................................................TTCCAGACCTGCAGCGAGTTCGGATG.......	26	1	1.00	1	1	0	0	0
.............................CGAAGGAGAACTACCAGG..................................................................................................................................................................................	18	1	1.00	1	1	0	0	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGATGGTTCCA.	24	1	1.00	1	0	1	0	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGATGGTTCC..	23	1	1.00	1	0	1	0	0
.........................................................................................................................................................................................................TGCAGCGAGTTCGGATGGTTC...	21	1	1.00	1	0	1	0	0
.................ACTACGAATGGTCGAAGGAGAA..........................................................................................................................................................................................	22	1	1.00	1	0	1	0	0
.........................................................................................................................................................................................................TGCAGCGAGTTCGGATGGT.....	19	1	1.00	1	0	1	0	0
........................ATGGTCGAAGGAGAACTACCAGGA---TA............................................................................................................................................................................	26	1	1.00	1	0	1	0	0
.................................................................................................................................................................................................TCCAGACCTGCAGCGAGTTCGGATGG......	26	1	1.00	1	0	1	0	0
...............................................................................................................................................................................................TTTCCAGACCTGCAGCGAGTT.............	21	1	1.00	1	0	1	0	0
...............................................................................................................................................................................................TTTCCAGACCTGCAGCGAGTTCGGATG.......	27	1	1.00	1	1	0	0	0
.........TGTTGGTTACTACGAATGGTCGAAG...............................................................................................................................................................................................	25	1	1.00	1	0	1	0	0
..............GTTACTACGAATGGTCGAAGGAG............................................................................................................................................................................................	23	1	1.00	1	0	1	0	0
..........GTTGGTTACTACGAATGGT....................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0
.AAGGGAGCTGTTGGTTACTACGAATGGTC...................................................................................................................................................................................................	29	1	1.00	1	0	1	0	0
......................................................................................................................................................................................................ACCTGCAGCGAGTTCGGAT........	19	1	1.00	1	0	1	0	0
.AAGGGAGCTGTTGGTTACTACGAATGGG....................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0
..........................................................................................................................................................................................................GCAGCGAGTTCGGATGGTTCCA.	22	1	1.00	1	0	1	0	0
......................GAATGGTCGAAGGAGAACT........................................................................................................................................................................................	19	1	1.00	1	0	1	0	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGATGGT.....	20	1	1.00	1	0	1	0	0
.............................................................................................................................................................................................ATTTTCCAGACCTGCAGCGA................	20	1	1.00	1	0	1	0	0
...........................GTCGAAGGAGAACTACCAGGA---TA............................................................................................................................................................................	23	1	1.00	1	0	1	0	0
.......................AATGGTCGAAGGAGAACTAC......................................................................................................................................................................................	20	1	1.00	1	0	1	0	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGATG.......	18	1	1.00	1	0	0	0	1
...................................................................................................................................................................................................CAGACCTGCAGCGAGTTCGG..........	20	1	1.00	1	1	0	0	0
.........TGTTGGTTACTACGAATGGT....................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0
..............GTTACTACGAATGGTCGAAGGAGAAC.........................................................................................................................................................................................	26	1	1.00	1	0	1	0	0
....................................................................................................................................................................................................AGACCTGCAGCGAGTTCGGAT........	21	1	1.00	1	0	1	0	0
CAAGGGAGCTGTTGGTTACTACG..........................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0
.....GAGCTGTTGGTTACTACGAATGGT....................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0
..........................................................................................................................................................................................................GCAGCGAGTTCGGATGGTT....	19	1	1.00	1	0	1	0	0
.AAGGGAGCTGTTGGTTACTACGA.........................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0
.AAGGGAGCTGTTGGTTACTACGAAT.......................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0
............................................................................................................................................................................................................AGCGAGTTCGGATGGTTCCT.	20	1	1.00	1	0	1	0	0
..................................................................................................................................................................................................CCAGACCTGCAGCGAGTTCGGATGGT.....	26	1	1.00	1	0	1	0	0
............................................................................................................................................................................................GATTTTCCAGACCTGCAGC..................	19	1	1.00	1	0	1	0	0
.........TGTTGGTTACTACGAATGGTCGAA................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0
.............................CGAAGGAGAACTACCAGGA---TA............................................................................................................................................................................	21	1	1.00	1	0	1	0	0
................TACTACGAATGGTCGAAGGA.............................................................................................................................................................................................	20	1	1.00	1	0	1	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGATGGTTCCA.	27	1	1.00	1	1	0	0	0
.................ACTACGAATGGTCGAAGGAGAACTACCAG...................................................................................................................................................................................	29	1	1.00	1	0	1	0	0
..........................................................................................................................................................................................................GCAGCGAGTTCGGATGGTTCC..	21	1	1.00	1	0	1	0	0
....GGAGCTGTTGGTTACTACGAATG......................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0
CAAGGGAGCTGTTGGTTACTACGAATG......................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGATGGTTC...	22	1	1.00	1	0	1	0	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGATGGT.....	21	1	1.00	1	0	1	0	0
........CTGTTGGTTACTACGAATGGTCGAAG...............................................................................................................................................................................................	26	1	1.00	1	0	1	0	0
............................................................................................................................................................................................GATTTTCCAGACCTGCAGCG.................	20	1	1.00	1	0	1	0	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGATGG......	19	1	1.00	1	0	1	0	0
......................GAATGGTCGAAGGAGAACTAC......................................................................................................................................................................................	21	1	1.00	1	0	1	0	0
............................................................................................................................................................................................GATTTTCCAGACCTGCAGCGAG...............	22	1	1.00	1	1	0	0	0
...................TACGAATGGTCGAAGGAGAACTAC......................................................................................................................................................................................	24	1	1.00	1	0	1	0	0
......AGCTGTTGGTTACTACGAATGGTC...................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0
.........................................................................................................................................................................................................TGCAGCGAGTTCGGATGGTT....	20	1	1.00	1	0	1	0	0
........................ATGGTCGAAGGAGAACTACCAGGA---..............................................................................................................................................................................	24	1	1.00	1	0	1	0	0
..............GTTACTACGAATGGTCGAAGGAGAA..........................................................................................................................................................................................	25	1	1.00	1	0	1	0	0
....................ACGAATGGTCGAAGGAGAACTCTT.....................................................................................................................................................................................	24	1	1.00	1	0	1	0	0
CAAGGGAGCTGTTGGTTACTAC...........................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0
...................................................................................................................................................................................................CAGACCTGCAGCGAGTTCGGATGGTTC...	27	1	1.00	1	0	1	0	0
......................................................................................................................................................................................................ACCTGCAGCGAGTTCGGATGGTTC...	24	1	1.00	1	0	1	0	0
................................AGGAGAACTACCAGGA---TAGT..........................................................................................................................................................................	20	1	1.00	1	0	1	0	0
..........GTTGGTTACTACGAATGGTCGAA................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0
....................ACGAATGGTCGAAGGAGAACTACCAG...................................................................................................................................................................................	26	1	1.00	1	0	1	0	0
..................CTACGAATGGTCGAAGGAG............................................................................................................................................................................................	19	1	1.00	1	0	1	0	0
....................ACGAATGGTCGAAGGAGAAC.........................................................................................................................................................................................	20	1	1.00	1	0	1	0	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGATGG......	20	1	1.00	1	0	1	0	0
...........TTGGTTACTACGAATGGTCGAA................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGATGGTTCCAG	25	1	1.00	1	0	1	0	0
....................ACGAATGGTCGAAGGAGAACTACCAGGA---..............................................................................................................................................................................	28	1	1.00	1	0	1	0	0
.................ACTACGAATGGTCGAAGGAGAAC.........................................................................................................................................................................................	23	1	1.00	1	0	1	0	0
..................CTACGAATGGTCGAAGGAGAA..........................................................................................................................................................................................	21	1	1.00	1	0	1	0	0
........................ATGGTCGAAGGAGAACTACCAGGA---T.............................................................................................................................................................................	25	1	1.00	1	0	1	0	0
........CTGTTGGTTACTACGAATGGTCGAA................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0

dm3

TAAGGGAGCTGTTGGCTACTACGAATGGTCTAAGGAGAACTACCAGGA---TAGTAGGTGCTACTTGCTTTTAGCATCATATATC---------CT----------TGT-----TAA------------------AA---C-------------CTATCTTTTTGACTCTTTAAGGTGACTTGCCCTGGATTTTCCAGACCTGCAGCGAGTTCGGATGGTTCCAG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
................TACTACGAATGGTCTAAGGAGAA..........................................................................................................................................................................................	23	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................CTAAGGAGAACTACCAGGA---T.............................................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................GCAGCGAGTTCGGATGGTT....	19	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....GAGCTGTTGGCTACTACGAATGGT....................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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....................................................................................C---------CT----------TGT-----TAA------------------AA---C-------------CTATCTTTTT.............................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
TAAGGGAGCTGTTGGCTAC..............................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................AAGGAGAACTACCAGGA---TAA...........................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GTTGGCTACTACGAATG......................................................................................................................................................................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

CAAGGGAGCAGTTGGCTACTACGAATGGTCCAAGGAGAACTACGAAGA---TAGTACGTGATTTCTAGTTTCAGCATCGTATAAC---------TT----------TGT-----AAT------------------AA---C-------------CTAACTTTTTAACTCTTTTAGGTGACTTGCCCTGGATCTTCCAGACCTGCAGCGAGTTCGGTTGGTTCCAG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.................................GGAGAACTACGAAGA---TAGT..........................................................................................................................................................................	19	1	20.00	20	1	0	0	0	16	3	0
.............................................................................................................................................................................................ATCTTCCAGACCTGCAGCGA................	20	1	12.00	12	1	0	0	0	8	3	0
..............................CAAGGAGAACTACGAAGA---TAGT..........................................................................................................................................................................	22	1	12.00	12	0	0	0	0	12	0	0
...............CTACTACGAATGGTCCAAGGAGAA..........................................................................................................................................................................................	24	1	11.00	11	0	0	0	0	9	2	0
......................GAATGGTCCAAGGAGAACT........................................................................................................................................................................................	19	1	9.00	9	1	0	0	0	6	2	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGTTGGTT....	24	1	8.00	8	1	0	0	0	7	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGTTGGT.....	23	1	7.00	7	0	0	1	0	5	1	0
................TACTACGAATGGTCCAAGGAGAA..........................................................................................................................................................................................	23	1	7.00	7	1	0	0	0	5	1	0
.................ACTACGAATGGTCCAAGGAGAACT........................................................................................................................................................................................	24	1	7.00	7	0	0	0	0	4	3	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGTTGGTTCCA.	24	1	6.00	6	0	0	0	0	6	0	0
CAAGGGAGCAGTTGGCTACTACGAATG......................................................................................................................................................................................................	27	1	6.00	6	0	0	0	0	6	0	0
.................ACTACGAATGGTCCAAGGAGAA..........................................................................................................................................................................................	22	1	6.00	6	0	0	0	0	4	2	0
...............CTACTACGAATGGTCCAAGGAGAACT........................................................................................................................................................................................	26	1	6.00	6	0	0	0	0	1	5	0
..............GCTACTACGAATGGTCCAAGGAGAA..........................................................................................................................................................................................	25	1	6.00	6	1	0	0	0	5	0	0
.............................................................................................................................................................................................................GCGAGTTCGGTTGGTTCCA.	19	1	5.00	5	0	0	0	0	4	1	0
............................................................................................................................................................................................................AGCGAGTTCGGTTGGTTCCA.	20	1	5.00	5	0	0	0	0	5	0	0
................TACTACGAATGGTCCAAGGAGAACT........................................................................................................................................................................................	25	1	5.00	5	0	0	0	0	4	1	0
..............................CAAGGAGAACTACGAAGA---TA............................................................................................................................................................................	20	1	5.00	5	1	0	0	0	4	0	0
..................CTACGAATGGTCCAAGGAGAACT........................................................................................................................................................................................	23	1	5.00	5	0	0	0	0	1	4	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGTT........	20	1	4.00	4	1	0	0	0	0	3	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGTTGGTT....	21	1	4.00	4	0	0	0	0	3	1	0
..................CTACGAATGGTCCAAGGAGA...........................................................................................................................................................................................	20	1	4.00	4	0	0	1	0	2	1	0
..................CTACGAATGGTCCAAGGAGAAC.........................................................................................................................................................................................	22	1	4.00	4	1	0	0	0	2	1	0
......................GAATGGTCCAAGGAGAACTACGAA...................................................................................................................................................................................	24	1	4.00	4	0	0	0	0	3	1	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGTTG.......	18	1	4.00	4	0	0	0	0	1	3	0
..............GCTACTACGAATGGTCCAAGGAGAACT........................................................................................................................................................................................	27	1	4.00	4	1	0	0	0	2	1	0
..................CTACGAATGGTCCAAGGAG............................................................................................................................................................................................	19	1	4.00	4	1	0	0	0	1	2	0
.................ACTACGAATGGTCCAAGGAGA...........................................................................................................................................................................................	21	1	4.00	4	0	0	0	0	4	0	0
..................CTACGAATGGTCCAAGGAGAA..........................................................................................................................................................................................	21	1	3.00	3	0	0	1	0	2	0	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGTT........	18	1	3.00	3	0	0	0	0	2	1	0
..............GCTACTACGAATGGTCCAAGGA.............................................................................................................................................................................................	22	1	3.00	3	1	0	0	0	1	1	0
...............CTACTACGAATGGTCCAAGGAGA...........................................................................................................................................................................................	23	1	3.00	3	1	0	0	0	1	1	0
...GGGAGCAGTTGGCTACTACGAATGGTC...................................................................................................................................................................................................	27	1	3.00	3	0	0	0	0	3	0	0
................................AGGAGAACTACGAAGA---TAGT..........................................................................................................................................................................	20	1	3.00	3	0	0	0	0	3	0	0
...............................................................................................................................................................................................CTTCCAGACCTGCAGCGA................	18	1	3.00	3	0	0	0	0	0	3	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGT.........	19	1	3.00	3	1	0	0	0	1	1	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGTTGGTT....	22	1	3.00	3	0	0	0	0	2	1	0
.............................................................................................................................................................................................ATCTTCCAGACCTGCAGCGAGTTCGGTT........	28	1	3.00	3	0	0	0	0	3	0	0
...............CTACTACGAATGGTCCAAGGAGAACTA.......................................................................................................................................................................................	27	1	3.00	3	0	0	0	0	2	1	0
......................GAATGGTCCAAGGAGAAC.........................................................................................................................................................................................	18	1	3.00	3	0	0	0	0	0	3	0
.....................CGAATGGTCCAAGGAGAACT........................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	1	1	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGTTGG......	19	1	2.00	2	0	0	0	0	2	0	0
.................ACTACGAATGGTCCAAGGA.............................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	2	0
..........................................................................................................................................................................................................GCAGCGAGTTCGGTTGGTT....	19	1	2.00	2	0	0	0	0	2	0	0
....GGAGCAGTTGGCTACTACGAATG......................................................................................................................................................................................................	23	1	2.00	2	1	0	0	0	1	0	0
...............................................................................................................................................................................................CTTCCAGACCTGCAGCGAGTTCGGTT........	26	1	2.00	2	0	0	0	0	1	1	0
....................ACGAATGGTCCAAGGAGAACT........................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	2	0	0
...........................GTCCAAGGAGAACTACGAAGA---TAGT..........................................................................................................................................................................	25	1	2.00	2	0	0	0	0	2	0	0
......AGCAGTTGGCTACTACGAATG......................................................................................................................................................................................................	21	1	2.00	2	2	0	0	0	0	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGTTGGTTCCA.	27	1	2.00	2	1	0	0	0	1	0	0
.............................................................................................................................................................................................ATCTTCCAGACCTGCAGCGAGTTCGGT.........	27	1	2.00	2	1	0	0	0	1	0	0
..........................................................................................................................................................................................................GCAGCGAGTTCGGTTGGT.....	18	1	2.00	2	0	0	0	0	2	0	0
........................ATGGTCCAAGGAGAACTACGAAG..................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	1	1	0
.............................................................................................................................................................................................ATCTTCCAGACCTGCAGC..................	18	1	2.00	2	0	0	0	0	0	2	0
..........................................................................................................................................................................................................GCAGCGAGTTCGGTTGGTTCCA.	22	1	2.00	2	0	0	0	0	2	0	0
...GGGAGCAGTTGGCTACTACGAATG......................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	2	0	0
.............................CCAAGGAGAACTACGAAGA---TA............................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	2	0
CAAGGGAGCAGTTGGCTACTACGAAT.......................................................................................................................................................................................................	26	1	2.00	2	1	0	0	0	1	0	0
.....GAGCAGTTGGCTACTACGAATGGT....................................................................................................................................................................................................	24	1	2.00	2	1	0	0	0	1	0	0
.....GAGCAGTTGGCTACTACGAATG......................................................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0	0	0
........CAGTTGGCTACTACGAATG......................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0	0
................TACTACGAATGGTCCAAGGAGA...........................................................................................................................................................................................	22	1	2.00	2	1	0	0	0	1	0	0
.....GAGCAGTTGGCTACTACGAATGGTCC..................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	2	0
.............................CCAAGGAGAACTACGAAGA---TAGTAC........................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	2	0
................TACTACGAATGGTCCAAGGAGAAC.........................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	2	0
......................GAATGGTCCAAGGAGAACTACGAAG..................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	1	1	0
.................ACTACGAATGGTCCAAGGAG............................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	2	0	0
....................ACGAATGGTCCAAGGAGAACTAC......................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1	0
..............GCTACTACGAATGGTCCAAGGAGAACTA.......................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0
.............GGCTACTACGAATGGTCCAAGG..............................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
..............GCTACTACGAATGGTCCAAG...............................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
...............................AAGGAGAACTACGAAGA---T.............................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0
.................................GGAGAACTACGAAGA---TAGTGAC.......................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGTTGGT.....	20	1	1.00	1	0	0	0	0	1	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGTTGG......	22	1	1.00	1	1	0	0	0	0	0	0
..........GTTGGCTACTACGAATGGTCCAAGGA.............................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................GATCTTCCAGACCTGCAGCGAGTTC............	25	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................................CTGGATCTTCCAGACCTGCAGCG.................	23	1	1.00	1	1	0	0	0	0	0	0
.................ACTACGAATGGTCCAAGGAGAAC.........................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
................TACTACGAATGGTCCAAGG..............................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
...........................GTCCAAGGAGAACTACGAAGA---..............................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
..........GTTGGCTACTACGAATGGT....................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................................................................................................................TCTTCCAGACCTGCAGCGA................	19	1	1.00	1	0	0	0	0	0	1	0
............................................................................................................................................................................................GATCTTCCAGACCTGCAGC..................	19	1	1.00	1	0	0	0	0	1	0	0
....................ACGAATGGTCCAAGGAGA...........................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0
.................................................................................................................................................................................GACTTGCCCTGGATCTTCCAGACCT.......................	25	1	1.00	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGTTGGTTC...	25	1	1.00	1	0	0	0	0	1	0	0
.....GAGCAGTTGGCTACTACGA.........................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................GCAGCGAGTTCGGTTGGTTC...	20	1	1.00	1	0	0	0	0	0	1	0
.............GGCTACTACGAATGGTCCAAGGAGAA..........................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0
.............GGCTACTACGAATGGTCCAAGGAGAACT........................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0
....................ACGAATGGTCCAAGGAGAA..........................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
........................ATGGTCCAAGGAGAACTACGAAGA---TAGT..........................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0
........................ATGGTCCAAGGAGAACTACGAAGA---..............................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................................................ACCTGCAGCGAGTTCGGTTG.......	20	1	1.00	1	1	0	0	0	0	0	0
...................TACGAATGGTCCAAGGAGAACTACGAAG..................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0
...............CTACTACGAATGGTCCAAGGAG............................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................................................................................................................TCTTCCAGACCTGCAGCGAGTTCGGTT........	27	1	1.00	1	0	0	0	0	0	1	0
.................ACTACGAATGGTCCAAGGAGAACTACG.....................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
.....GAGCAGTTGGCTACTACGAAT.......................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...................TACGAATGGTCCAAGGAGAACT........................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
CAAGGGAGCAGTTGGCTACT.............................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
....GGAGCAGTTGGCTACTACGAATGGT....................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0
....................................................................................................................................................................................................AGACCTGCAGCGAGTTCGGTT........	21	1	1.00	1	0	0	0	0	1	0	0
................................................................................................................................................................................................TTCCAGACCTGCAGCGAGTTCGGTT........	25	1	1.00	1	0	0	0	0	1	0	0
........CAGTTGGCTACTACGAATGGTC...................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................GATCTTCCAGACCTGCAGCGAGT..............	23	1	1.00	1	0	0	0	0	1	0	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGTTG.......	19	1	1.00	1	1	0	0	0	0	0	0
................TACTACGAATGGTCCAAG...............................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
......AGCAGTTGGCTACTACGAATGG.....................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGC.........	19	1	1.00	1	0	0	0	0	0	1	0
...............CTACTACGAATGGTCCAAG...............................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
..........................GGTCCAAGGAGAACTACGAAGA---TAGT..........................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1	0
...........................................................................................................................................................................................GGATCTTCCAGACCTGCAGC..................	20	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................................AGCGAGTTCGGTTGGTTCC..	19	1	1.00	1	0	0	0	0	1	0	0
........................ATGGTCCAAGGAGAACTA.......................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
....................................................................................................................................................................................................AGACCTGCAGCGAGTTCGGTTGGTT....	25	1	1.00	1	1	0	0	0	0	0	0
......................GAATGGTCCAAGGAGAACTACGAAGA---TA............................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGTTGGT.....	21	1	1.00	1	0	0	0	0	0	1	0
...................TACGAATGGTCCAAGGAGAA..........................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
CAAGGGAGCAGTTGGCTACTACGA.........................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
.............................CCAAGGAGAACTACGAAGA---TAGTGA........................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
.....GAGCAGTTGGCTACTACGAATGGTCCAA................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
....................ACGAATGGTCCAAGGAGAAC.........................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
.................ACTACGAATGGTCCAAGGAGAACTA.......................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
........CAGTTGGCTACTACGAATGG.....................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
.......................AATGGTCCAAGGAGAACT........................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................................................ACCTGCAGCGAGTTCGGTTGGTTC...	24	1	1.00	1	0	0	0	0	1	0	0
...............CTACTACGAATGGTCCAAGGAGAAC.........................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
.......GCAGTTGGCTACTACGAATGGTC...................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1	0
...........................................................................................................................................................................................................CAGCGAGTTCGGTTGGTTCCA.	21	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................................................TGCAGCGAGTTCGGTTGGTT....	20	1	1.00	1	0	0	0	0	1	0	0
........CAGTTGGCTACTACGAATGGTCCA.................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
..AGGGAGCAGTTGGCTACTACGAATGGT....................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0	0
...........................................................................................................................................................................................GGATCTTCCAGACCTGCAGCG.................	21	1	1.00	1	0	0	0	0	1	0	0
...............CTACTACGAATGGTCCAAGGA.............................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0
...........................GTCCAAGGAGAACTACGAAGA---T.............................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
...........................................................................................................................................................................................GGATCTTCCAGACCTGCAGCGA................	22	1	1.00	1	1	0	0	0	0	0	0
....GGAGCAGTTGGCTACTACGAAA.......................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
.............................................................................................................................................................................................ATCTTCCAGACCTGCAGCG.................	19	1	1.00	1	0	0	0	0	1	0	0
.AAGGGAGCAGTTGGCTACTACGA.........................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
....GGAGCAGTTGGCTACTAC...........................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGTTGGTTCCA.	25	1	1.00	1	0	0	0	0	1	0	0
..............GCTACTACGAATGGTCCAAGGAG............................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
.................................GGAGAACTACGAAGA---TAGTGA........................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
......AGCAGTTGGCTACTACGAATGGTCC..................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1	0
..........GTTGGCTACTACGAATGGTCCAA................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
................TACTACGAATGGTCCAAGGA.............................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
.................................................................................................................................................................................................TCCAGACCTGCAGCGAGTT.............	19	1	1.00	1	0	0	0	0	1	0	0
...........................GTCCAAGGAGAACTACGAAGA---TAGTAC........................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0	0
...........................GTCCAAGGAGAACTACGAA...................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
CAAGGGAGCAGTTGGCTA...............................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
............................................................................................................................................................................................GATCTTCCAGACCTGCAGCGA................	21	1	1.00	1	0	0	0	0	1	0	0
..................CTACGAATGGTCCAAGGA.............................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
CAAGGGAGCAGTTGGCTACTAC...........................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
................................................................................................................................................................................TGACTTGCCCTGGATCTTCCA............................	21	1	1.00	1	0	0	0	0	0	1	0
.............GGCTACTACGAATGGTCCAAGGAGA...........................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
.............GGCTACTACGAATGGTCCAAGGAG............................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0
.............................CCAAGGAGAACTACGAAGA---TAGT..........................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................................................ACCTGCAGCGAGTTCGGTTGGT.....	22	1	1.00	1	0	0	0	0	1	0	0
.........AGTTGGCTACTACGAATGGT....................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................TCTTCCAGACCTGCAGCGAGTTCGGT.........	26	1	1.00	1	1	0	0	0	0	0	0
.....................CGAATGGTCCAAGGAGAACTAC......................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGTTGGG.....	23	1	1.00	1	0	0	0	0	0	1	0
.............GGCTACTACGAATGGTCCAAGGAGAAC.........................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1	0
CAAGGGAGCAGTTGGCTACTA............................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................................................AGACCTGCAGCGAGTTCGGTTGGTTC...	26	1	1.00	1	1	0	0	0	0	0	0
................TACTACGAATGGTCCAAGAG.............................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	1	0	0

droYak3

CAAGGGATCTGTTGGCTACTACGAATGGTCTAAGGATAACTACCAAGA---TAGTACGGGGTTTTTATTTTAAGCATAATATAAC---------TT----------TGT-----TAT------------------AA---CTAAG--------------TTTTTAACTCTTTTAGGTGACTTGCCCTGGGTTTTCCAGACCTGCAGCGAGTTCGGATGGTTCCAG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.............................CTAAGGATAACTACCAAGA---TAGT..........................................................................................................................................................................	23	2	4.00	8	2	0	0	0	0	0	6	0	0	0	0
........................ATGGTCTAAGGATAACTACCAAGA---TAGT..........................................................................................................................................................................	28	2	2.00	4	0	0	0	0	0	0	4	0	0	0	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGATGGTT....	21	2	2.00	4	0	0	0	0	0	0	4	0	0	0	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGATGGTT....	22	2	2.00	4	2	0	0	0	0	0	2	0	0	0	0
.............................................................................................................................................................................................GTTTTCCAGACCTGCAGCGA................	20	2	2.00	4	0	0	0	0	0	0	4	0	0	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGAT........	20	2	1.50	3	2	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................GCAGCGAGTTCGGATGGTTC...	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................GGTTTTCCAGACCTGCAGCGA................	21	2	1.00	2	0	2	0	0	0	0	0	0	0	0	0
..............GCTACTACGAATGGTCTAAGGATAACT........................................................................................................................................................................................	27	2	1.00	2	2	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGATGGTTCC..	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGATG.......	21	2	1.00	2	2	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGATG.......	18	2	1.00	2	2	0	0	0	0	0	0	0	0	0	0
................TACTACGAATGGTCTAAGGATAACTACC.....................................................................................................................................................................................	28	2	1.00	2	1	0	0	0	0	0	1	0	0	0	0
..............................TAAGGATAACTACCAAGA---TAGT..........................................................................................................................................................................	22	2	1.00	2	0	0	0	0	0	0	2	0	0	0	0
................TACTACGAATGGTCTAAGGATA...........................................................................................................................................................................................	22	2	1.00	2	1	0	0	0	0	0	1	0	0	0	0
.....................CGAATGGTCTAAGGATAACTACCAAG..................................................................................................................................................................................	26	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGATGGTT....	24	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGATG.......	19	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
...............CTACTACGAATGGTCTAAGGAT............................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.....GATCTGTTGGCTACTACGA.........................................................................................................................................................................................................	19	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
...................TACGAATGGTCTAAGGATAAC.........................................................................................................................................................................................	21	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TTTTCCAGACCTGCAGCGAG...............	20	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................GACCTGCAGCGAGTTCGGATGGT.....	23	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................CCTGCAGCGAGTTCGGATGG......	20	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
...............CTACTACGAATGGTCTAAGGATAACT........................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
.................ACTACGAATGGTCTAAGGAT............................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
......ATCTGTTGGCTACTACGAATGGTCT..................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
..................CTACGAATGGTCTAAGGATAACTACCAA...................................................................................................................................................................................	28	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
CAAGGGATCTGTTGGCTACTACGA.........................................................................................................................................................................................................	24	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................ACCTGCAGCGAGTTCGGAT........	19	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
..................CTACGAATGGTCTAAGGATAACT........................................................................................................................................................................................	23	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
.....GATCTGTTGGCTACTACGAATGGT....................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
..................CTACGAATGGTCTAAGGATAACTACCA....................................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
...............CTACTACGAATGGTCTAAGG..............................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................ACTCTTTTAGGTGACTTGCCCTG.....................................	23	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
.................ACTACGAATGGTCTAAGGATAAC.........................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................GTTTTCCAGACCTGCAGC..................	18	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
..........GTTGGCTACTACGAATGGTCTAAGG..............................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
.................ACTACGAATGGTCTAAGGA.............................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................TTTTCCAGACCTGCAGCGA................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
..................CTACGAATGGTCTAAGGATAACTA.......................................................................................................................................................................................	24	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
..................CTACGAATGGTCTAAGGAT............................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
................TACTACGAATGGTCTAAGGA.............................................................................................................................................................................................	20	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................CTGCAGCGAGTTCGGATGGT.....	20	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................TTTCCAGACCTGCAGCGAGTTCGGATGGT.....	29	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
................TACTACGAATGGTCTAAGGAT............................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................TGCAGCGAGTTCGGATGGG.....	19	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0

droEug1

CAAGGGAGCTGTGGACTACTACGAATGGTCCAAGGAGAACTACGAAGA---TAGTAAGTGAATATAACTGATAGCATCTTGAAAC---------CA----------TGC-----TAA----AAACG------------------------TAT-------------CCTCTTTAGGCGACTTGCCTTGGATTTTCCAGACCTGCAGCGAGTTTGGATGGTTCCAG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CAAAGGAGCTGTGGAGTACTACGAGTGGTCCAAGGAGAACTACGAAGA---TAGTATGTATCTCGAAAG------TTAAAATAT-T-------------------------------GACGAAGACGATGT-TT-TAA--TATGTTTTCCCAC-------------ACCTTTTAGGCGACTTGCCTTGGATTTTCCAAACCTGCAGCGAGTTCGGATGGTTCCAG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TAATGGAGCTGTGGGCTACTATGAATGGTCTAAGGAGAACTACGAAGA---CAGTGAGTTTTAA---CTTTTAATATAAAAT-----------------------------------ATAAAATAATAATAATT-TAA--TATATCTTTCTAC-------------CCTTTTTAGGCGACTTGCCCTGGATCTTCCAGACCTGCAACGAGTTCGGTTGGTTCCAG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CCAAGGAGCTGTGGACTACTACGAATGGTCCAAAGAGAACTACGAAGA---CAGTAAGTGGTTTTACCTTCTAAAGCAA----TCTTTTTTGAA--TAAG------TGT-----TAT------------------TAATG--ACATTTTTCAT-------------CCTTTTTAGGCGACTTGCCATGGATTTTCCAGACCTGCAGCGAGTTCGGATGGTTCCAA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CAATGGAGCTGTAGACTACTACGAATGGTCCAAGGAGAACTACGAAGA---CAGTAAGTGGTTTTAACATCTAAATCAT----TCTCATTTGAA--ACCA------TTT-----TTT------------------AAACG--ACTTTTTCCAC-------------CCTCTTTAGGCGACTTGCCCTGGATTTTCCAGACCTGCAACGAGTTCGGATGGTTCCAA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CAACGGAGCGGTGGGATACTACGAATGGTCCAAGGAGAACTACGAAGA---CAGTAAGTGATTTTAACTTAAAGTTTAC----TC---------TT----------TTT-----TAT------------------AACCG--ACATTTTCCTC-------------TCTTTTAAGGCGACTTGCCTTGGATTTTCCAGACCTGCAACGAATTCGGATGGTTCCAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CAAAGGAGCTGTGGGCTACTATGAATGGTCCAAGGAAAACTACGAAGA---TAGTAAGCCTTCACTC---TGT--TTAAATCAT---------------------------------TTCTGATGCTA--------ACAG--ATAATTTTCTC-------------TCTCCACAGGCGATCTGCCTTGGATCTTCCAGACCTGCAGCGAGTTCGGTTGGTTCCAA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

CGACGGAACTACTGGATATTATGAATGGGCCAAGGATAACTACGAAGA---TAGTAAGTCTTGCACAAA-----------AAAA-TAAAGT---------------------------------------------TT--AGGCAA---ACATTCCTTAACAAAA-AAAAATCAGGCGATCTGCCCTGGTTCTTCCAGACCTGCAGCGAGTTCGGCTGGTTCCAG	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...............ATATTATGAATGGGCCAAGGATAACT........................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0

droBip1

CGACGGAACTACGGGATACTATGAATGGTCCAAGGACAACTACGAAGA---TAGTAAGTACTTCAAGAA------ACAT------TCAATTGAC--ACATTT----TCTAATAA---ACAA------------------------------------------------AATCAGGCGACCTGCCCTGGTTCTTCCAGACCTGCAGCGAGTTCGGATGGTTCCAG	Size	Hit Count	Total Norm	Total
No Reads

dp5

TAAGGGCACCGTCAACTACTACAAATGGGCCAAGATAAACTATGAAGACGACAGTGAGTGATATTCT---G-----------------AAA----------------------G---GAAGAAGCCTATCCCTT-------------TCTCATCCCTTTCCCTTG-TGTTCTCAGGCGGTCTTCCCTGGATATATCAGACTTGCAGCGAATTTGGTTGGTACCAG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
....................................................................................................................................................................................CTTCCCTGGATATATCAGACTTGCAGC..................	27	1	7.00	7	0	7	0	0	0	0	0	0	0	0
....................................................................................................................................................................................CTTCCCTGGATATATCAGACTTGC.....................	24	1	6.00	6	0	6	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................CAGACTTGCAGCGAATTTGGTT........	22	1	6.00	6	0	6	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................GACTTGCAGCGAATTTGGTTG.......	21	1	5.00	5	0	5	0	0	0	0	0	0	0	0
....................................................................................................................................................................................CTTCCCTGGATATATCAGACTT.......................	22	1	4.00	4	0	4	0	0	0	0	0	0	0	0
....................................................................................................................................................................................CTTCCCTGGATATATCAGACTTGCAGCGA................	29	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................GACTTGCAGCGAATTTGGTTGGTACC..	26	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................ATATATCAGACTTGCAGCGAATTTG...........	25	1	3.00	3	0	2	0	0	0	0	1	0	0	0
........CCGTCAACTACTACAAATGGGC...................................................................................................................................................................................................	22	1	3.00	3	0	3	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................CAGACTTGCAGCGAATTTG...........	19	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.....GCACCGTCAACTACTACAA.........................................................................................................................................................................................................	19	2	2.50	5	0	5	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................CAGACTTGCAGCGAATTTGGTTGGT.....	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ATCAGACTTGCAGCGAATTTG...........	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................ATATATCAGACTTGCAGCGA................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................GACTTGCAGCGAATTTGGTT........	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
............................GCCAAGATAAACTATGAAGA.................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AGACTTGCAGCGAATTTGGTTG.......	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................GGGCCAAGATAAACTATGAA...................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................GGGCCAAGATAAACTATGAAGA.................................................................................................................................................................................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ATCAGACTTGCAGCGAATTTGGTTGGT.....	27	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................CCCTGGATATATCAGACTTGCAGCGA................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................CTTGCAGCGAATTTGGTTG.......	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TCCCTGGATATATCAGACTTGCAGCGA................	27	1	2.00	2	0	2	0	0	0	0	0	0	0	0
............CAACTACTACAAATGGGCCAAGAT.............................................................................................................................................................................................	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ATCAGACTTGCAGCGAATTTGGTTG.......	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................AATGGGCCAAGATAAACTATGAAGA.................................................................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................GGGCCAAGATAAACTATGAAGAC................................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................ATATATCAGACTTGCAGCGAATTTGGTT........	28	1	2.00	2	0	1	0	0	0	0	1	0	0	0
......................................................................................................................................................................................TCCCTGGATATATCAGACTTGCA....................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................ATATCAGACTTGCAGCGAATTTGGTTG.......	27	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..................................ATAAACTATGAAGACGACAGC..........................................................................................................................................................................	21	1	2.00	2	0	1	0	0	0	0	1	0	0	0
...............CTACTACAAATGGGCCAAG...............................................................................................................................................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................CCCTGGATATATCAGACTTG......................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................CTACAAATGGGCCAAGATAAACTATGA....................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........GTCAACTACTACAAATGGGC...................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................CAAATGGGCCAAGATAAACTATGA....................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................AATGGGCCAAGATAAACT........................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AGACTTGCAGCGAATTTGGTTGG......	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................CTTCCCTGGATATATCAGACT........................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................CAGACTTGCAGCGAATTTGGT.........	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
......................................................................................................................................................................................TCCCTGGATATATCAGACTTGCAGC..................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................AGCGAATTTGGTTGGTACC..	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................AATGGGCCAAGATAAACTATGA....................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................T-------------TCTCATCCCTTTCCCTTG-TGTTCT.....................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................CTTCCCTGGATATATCAGACTTGCA....................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TGCAGCGAATTTGGTTGGTACC..	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................ACTACAAATGGGCCAAGATAAACTATGA....................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................CTTGCAGCGAATTTGGTTGG......	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................ATGGGCCAAGATAAACTATGAAGACG...............................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................ATATCAGACTTGCAGCGAAT..............	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................CTACAAATGGGCCAAGATAAACTAT......................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................AATGGGCCAAGATAAACTATGAAGAC................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ATCAGACTTGCAGCGAATTTGGTT........	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............AACTACTACAAATGGGCCAAG...............................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................CTTCCCTGGATATATCAGACTTG......................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ATCAGACTTGCAGCGAATTTGG..........	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........CGTCAACTACTACAAATGGGCC..................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................TGGGCCAAGATAAACTATGAAGA.................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TCCCTGGATATATCAGACTTGC.....................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................CCCTGGATATATCAGACTTGCAG...................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................ATATATCAGACTTGCAGCGAATTT............	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................CAAATGGGCCAAGATAAAC.........................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................AAATGGGCCAAGATAAACTATGAA...................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................ATGGGCCAAGATAAACTATGA....................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
TAAGGGCACCGTCAACTACTAC...........................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0
....................................AAACTATGAAGACGACAGC..........................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TGCAGCGAATTTGGTTGGTACCA.	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........CCGTCAACTACTACAAATGG.....................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TATCAGACTTGCAGCGAATTTG...........	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................ATATATCAGACTTGCAGCG.................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................GGCCAAGATAAACTATGAAG..................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AGACTTGCAGCGAATTTGGTT........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCAGACTTGCAGCGAATTTGG..........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............CAACTACTACAAATGGGCCAAGATAAACT........................................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................ACTACAAATGGGCCAAGAT.............................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................GGGCCAAGATAAACTATGA....................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................GATAAACTATGAAGACGACAGC..........................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................CTTCCCTGGATATATCAGA..........................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................GATATATCAGACTTGCAGCGA................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................................................................................ATATCAGACTTGCAGCGAATTTG...........	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TTCCCTGGATATATCAGACTTGCAGC..................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....GCACCGTCAACTACTACAAAT.......................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............CTACTACAAATGGGCCAAGA..............................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................GACTTGCAGCGAATTTGGTTGG......	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................GGCCAAGATAAACTATGAA...................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................ATAAACTATGAAGACGACA............................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................CTACAAATGGGCCAAGATAAACTATG.....................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................CCCTGGATATATCAGACTT.......................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................CAGACTTGCAGCGAATTTGGTTGG......	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................CTTGCAGCGAATTTGGTTGGTACCA.	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............CAACTACTACAAATGGGCC..................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATATCAGACTTGCAGCGAATTTGGTT........	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TATCAGACTTGCAGCGAATTTGGTTG.......	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TATCAGACTTGCAGCGAATTTGGTTGG......	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................ATATCAGACTTGCAGCGAATTTGGTT........	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................CTACAAATGGGCCAAGATA............................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................GATATATCAGACTTGCAGCGAATTTG...........	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................CTTCCCTGGATATATCAGACTTGCAGCG.................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

TAAGGGCACCGTCAACTACTACAAATGGGCCAAGATAAACTATGAAGACGACAGTGAGTGATATTCT---G-----------------AAA----------------------G---GAAGAAGCCTATCCCTT-------------TCTCATCCCTTTCCCTTG-TGTTCTCAGGCGGTCTTCCCTGGATATATCAGACTTGCAGCGAATTTGGTTGGTACCAG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...................................................................................................................................................................................................CAGACTTGCAGCGAATTTG...........	19	1	3.00	3	0	0	0	0	0	3
.....................................................................................................................................................................................................GACTTGCAGCGAATTTGGTTG.......	21	1	2.00	2	0	1	0	0	0	1
.............................................................................................................................................................................................ATATATCAGACTTGCAGCGAATTTG...........	25	1	2.00	2	0	0	0	0	0	2
.............................................................................................................................................................................................ATATATCAGACTTGCAGCGA................	20	1	2.00	2	0	0	0	0	0	2
....................................................................................................................................................................................................AGACTTGCAGCGAATTTGGTTG.......	22	1	1.00	1	0	1	0	0	0	0
......CACCGTCAACTACTACAA.........................................................................................................................................................................................................	18	2	1.00	2	1	0	1	0	0	0
.................................................................................................................................................................................................ATCAGACTTGCAGCGAATTTG...........	21	1	1.00	1	0	0	0	0	0	1
.............................CCAAGATAAACTATGAAGAC................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................AGACTTGCAGCGAATTTGGTTGGT.....	24	1	1.00	1	0	0	0	0	0	1
..........................GGGCCAAGATAAACTATGAAGACGACAG...........................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	1
..............................CAAGATAAACTATGAAGACGACA............................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................CTTCCCTGGATATATCAGACTTGC.....................	24	1	1.00	1	0	1	0	0	0	0
........................................TATGAAGACGACAGTGAGTGAT...................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.................ACTACAAATGGGCCAAGATAAACTATGA....................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................CTTGCAGCGAATTTGGTTG.......	19	1	1.00	1	0	0	0	0	0	1
.................................GATAAACTATGAAGACGACAGTGAGTGA....................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	1
.....................................................................................................................................................................................TTCCCTGGATATATCAGACTT.......................	21	1	1.00	1	0	1	0	0	0	0

droWil2

CAA-GGAGCCGTAGACTACTACAAATGGTCCATGGACAACTATCAAGG---CAGTGAGTATCTCACAAG-----------AACT-TTAACATTT--ACAATTAATTAAC-----T--------G------------------CTTCAC-----------TTAATC-AATATTCAGCTGGCATTGCATGGACTTATCAAACTTGCAACGAATTCGGTTGGTTCCAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
No Reads

droVir3

TAAGGGAACTGTTGCCTATTACAAATGGTCAATGGACAACTACGATGG---TTGTAAGTATATACTGGC------ATAACAAAT-T-----GACCA----------AGT---------------------------AA--AGTAAATCATTTC-------------TTCTCTTAGCTGGTCTTGCTTGGTTCTATCAAACATGCAGAGAATTTGGCTGGTTTCAA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..............................................................................................................................................................................................TCTATCAAACATGCAGAGA................	19	1	5.00	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..........GTTGCCTATTACAAATGGT....................................................................................................................................................................................................	19	1	4.00	4	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............GCCTATTACAAATGGTCAATGGAC............................................................................................................................................................................................	24	1	4.00	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................GGTTCTATCAAACATGCAGA..................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0
...GGGAACTGTTGCCTATTACAAATGGT....................................................................................................................................................................................................	26	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................GTTCTATCAAACATGCAGAG.................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0
...................TACAAATGGTCAATGGACAACTACGATG..................................................................................................................................................................................	28	1	2.00	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................GTTCTATCAAACATGCAGA..................	19	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................CAATGGACAACTACGATGG---TTC...........................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................ATTACAAATGGTCAATGGA.............................................................................................................................................................................................	19	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................AAATGGTCAATGGACAACTACGATGG---T.............................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................TACAAATGGTCAATGGACAACTACG.....................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................CTTGGTTCTATCAAACATGCAGAGA................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................GGTTCTATCAAACATGCAGAGAATTT............	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........TTGCCTATTACAAATGGT....................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......AACTGTTGCCTATTACAAATGGTC...................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AAACATGCAGAGAATTTGGCTGGT.....	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................CTCTTAGCTGGTCTTGCTTG.....................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............GCCTATTACAAATGGTCAATGGACA...........................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AAACATGCAGAGAATTTGGCTG.......	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................CAAATGGTCAATGGACAACT........................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................ACAAATGGTCAATGGACAA..........................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................GGTTCTATCAAACATGCAGAGAATT.............	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................TGGTTCTATCAAACATGCAGAGA................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TATCAAACATGCAGAGAATTTGGCTG.......	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CTATCAAACATGCAGAGAATTTGGCTG.......	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AAACATGCAGAGAATTTGGC.........	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................CTGGTCTTGCTTGGTTCT................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................TTTC-------------TTCTCTTAGCTGGTCTT..........................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ATCAAACATGCAGAGAATTTGGCTGGT.....	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................................................................................................AACATGCAGAGAATTTGGCTGGTTTC..	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................CTGGTCTTGCTTGGTTCTATCAAA..........................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TCTATCAAACATGCAGAGAATTTGG..........	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................CATGCAGAGAATTTGGCTG.......	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............CTATTACAAATGGTCAATGGACA...........................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................GGTTCTATCAAACATGCAGAGA................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................................................................................ATGCAGAGAATTTGGCTGGTTTC..	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................CAATGGACAACTACGATG..................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................CAATGGACAACTACGATGG---TT............................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................ACAAATGGTCAATGGACAACTAC......................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................CTGGTCTTGCTTGGTTCTATC.............................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................TTGGTTCTATCAAACATGC.....................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................TACAAATGGTCAATGGAC............................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCAAACATGCAGAGAATTTGG..........	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................ATGGTCAATGGACAACTACGATGG---T.............................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.....GAACTGTTGCCTATTACAAATGGTC...................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..AGGGAACTGTTGCCTATTACA..........................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................ACAAATGGTCAATGGACAAC.........................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................TGGTTCTATCAAACATGC.....................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....GAACTGTTGCCTATTACAAATG......................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................TTGGTTCTATCAAACATGCAGAGA................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................ATAACAAAT-T-----GACCA----------AGT---------------------------AA--AGTA.................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....GAACTGTTGCCTATTACAAATGGT....................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................AACATGCAGAGAATTTGG..........	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TGCTTGGTTCTATCAAACATGCAGA..................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................ATGGACAACTACGATGG---TT............................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................ATTACAAATGGTCAATGGAC............................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................TTACAAATGGTCAATGGAC............................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................TGGTTCTATCAAACATGCAGAG.................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ATCAAACATGCAGAGAATTTGGC.........	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CTATCAAACATGCAGAGAATT.............	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................CAATGGACAACTACGATGG---TTGTAAGT......................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................ATCAAACATGCAGAGAATT.............	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......AACTGTTGCCTATTACAAATGGT....................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ATCAAACATGCAGAGAATTTGGCT........	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...........................................................................................................................................................................................GGTTCTATCAAACATGCAGAG.................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......ACTGTTGCCTATTACAAATG......................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................ATGCAGAGAATTTGGCTG.......	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............CTATTACAAATGGTCAATGG..............................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................TGGTTCTATCAAACATGCAGA..................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................................................................................................................................................................................................CAAACATGCAGAGAATTTGGCTG.......	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.AAGGGAACTGTTGCCTATT.............................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................ATGGACAACTACGATGG---TTGTAAGT......................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................TACAAATGGTCAATGGACAACT........................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........CTGTTGCCTATTACAAATGGTC...................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TCAGGGAACTGTTGATTATTACAAATGGTCCAAAAATAACTACGATGG---TTGTGAGTAAAACCTC---A-----------------ATAGAC--ACTGTTAGTTAGT--TAA---ATATAAG------------------CCTTATTCTTT-------------CCTTCTTAGCTGGCCTCGGTTGGTTCTACCAAACATGCAGACAATTTGGTTGGTTCCAA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
No Reads

droGri2

TAAAGCAACTGTTAAATATTACAAGTGGGCAATGCATAACTATGATGG---TTGTAAGTGACACCTT---GTTAAATGA----A-T-------------------------------GATGAATACTAAGT--CTGA---CGAATCAAATAAC---T---------CTTTCTTAGCTGGTCTCAGCTGGTTCTTTCAAACATGCAACGAATTCGGCTGGTACCAA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_17940

3r:6038998-6039058 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads