ID:

dsi_17739

 Coordinate:

2l:16258479-16258628 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.1 -19.0 -18.9

Flybase annnotation

CDS [2l_16258629_16258852_+]; exon [2l_16258629_16258852_+]; intron [2l_16258022_16258628_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCCGGTGTCCGGGTCCGGGGAATTCGAGGAATACGGGAGTACGACTAACGACAGACAGACGGCATACGGCGCACTCAATGCACCCGGACGGAGAACAGTCGATACACAGACACCAGCGTTGCAGCTGCAGTTGCAGTTCGTCCTGCAGCGGTCGTATATCCGTTACTAATCCCCGAACTATATCCGATATTTGGATGCAGGGTGAAGCTACTAATCAACCGGCAGACTGGCGAGGCTGTGGCCATGAAAA
************************************************************************************************************....((((((((((((((((....))))......))))))))((((.((((..(((...........))).)))).))))..)))).******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 M053
female body
 SRR553488
RT_0-2 hours eggs
 M025
embryo
............................................................................................................GACACCAGCGTTGCAGCTG........................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................ACTGGCGAGGCTGTGGC........ 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TAATCAACCGGCAGACTGGCGAG................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................TTGCAGTTCGTCCTGCAGC..................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................GGAGAACAGTCGATACAC............................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................TGAAGGGTGTAGCTACT...................................... 17 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TACTAATCAACCGGCAGACTGGCGAGG............... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................ACCCGGACGGAGAACAGTCGATACACA.............................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................GCAGTTGCAGTTCGTCCTG......................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TCCCCGAACTATATCCGATATTTGGA....................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................GCAGGGTGTAGCTAC....................................... 15 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.CCGTTATCCGGGTCCGGG....................................................................................................................................................................................................................................... 18 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0
....................................................................................TGGACGGAGAACAGTCGT.................................................................................................................................................... 18 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................GTGCAGGGTGTAGCTAC....................................... 17 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTGGCGAGGCTGTGGA........ 16 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..............................................................................GGCACCTGGACGGAGAAC.......................................................................................................................................................... 18 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0
..CGTTATCCGGGTCCGGG....................................................................................................................................................................................................................................... 17 2 8 0.13 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................ATTTGGATGCAGGTTGTA............................................ 18 2 9 0.11 1 0 0 0 0 0 0 1 0 0 0
..............................ATACGGTAGTACAACTTAC......................................................................................................................................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 1 0 0
............................................................................................GGACGGTCGATACACA.............................................................................................................................................. 16 2 14 0.07 1 0 0 0 0 0 0 0 0 1 0
.........CGGACCCAGGGAATTCGA............................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0
....................................................................................TGGACGGAGAACACTC...................................................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
....................................................................................CGGGCGTCGAACAGTCGA.................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0
..................................................ACAGACAAACTGCATACAG..................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GGGCCACAGGCCCAGGCCCCTTAAGCTCCTTATGCCCTCATGCTGATTGCTGTCTGTCTGCCGTATGCCGCGTGAGTTACGTGGGCCTGCCTCTTGTCAGCTATGTGTCTGTGGTCGCAACGTCGACGTCAACGTCAAGCAGGACGTCGCCAGCATATAGGCAATGATTAGGGGCTTGATATAGGCTATAAACCTACGTCCCACTTCGATGATTAGTTGGCCGTCTGACCGCTCCGACACCGGTACTTTT
*******************************************************....((((((((((((((((....))))......))))))))((((.((((..(((...........))).)))).))))..)))).************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
.............................................................................................................TGTGGCCGCAATGTCGACTTC........................................................................................................................ 21 3 2 1.50 3 0 3 0 0
........GGCCCAAGCCCCTTCAGCT............................................................................................................................................................................................................................... 19 2 1 1.00 1 1 0 0 0
.........................................GCTGATTGCTGTCGGT................................................................................................................................................................................................. 16 1 1 1.00 1 1 0 0 0
...................................................................................................................................................................ATGATTACGGGCCAGATATA................................................................... 20 3 4 0.25 1 0 0 1 0
...........................................................................................TATGGTCAGCTATGTG............................................................................................................................................... 16 2 20 0.05 1 0 0 0 1
.............................................................................................................................................................................................................TTGATGATTAGATGGC............................. 16 2 20 0.05 1 0 0 0 1
......................................................................................................................................TCAAGCAGAATGTCGC.................................................................................................... 16 2 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:16258429-16258678 + dsi_17739 CCCGG-----T--------------------GTCC---------------------GGGTCCGGGGA-ATTCGAGGAA---------TACGGGAG------------------TACGACTAACGACAGACAGA---------------CGGCATACGGC--------GCACTCAATGCACCCGGAC--GGAGAACAGTCGATACACAGACA---C-----------------------------------CA--------------------GCGTTGCAG---CTGC-------------AG-TT--GCAGTTCGTCCTG-----------------------------CAGCGG---------TCGT---ATAT------CCGTT---ACTAATCCCC-GAACTAT------------------------ATCCGATA---T-TTG-----GATGCAGGGTGAAGCTACTAATCAACCGGCAGACTGGCGAGGCTGTGGCCATGAAAA
droSec2 scaffold_7:338659-338908 + CCCGG-----T--------------------GTCC---------------------GGGTCCGGGGA-ATTCGAGGAA---------TACGGGAG------------------TACGACTAACGACAGACAGA---------------CGGCATACGGC--------GCACTCAATGCACCCGGAC--GGAGAACAGTCGATACACAGACA---C-----------------------------------CA--------------------GCGTTGCAG---CTGC-------------AG-TT--GCAGTTCGTCCTG-----------------------------CAGCGG---------TCGT---ATAT------CCGTT---ACTAATCCCC-GAACTAT------------------------ATCCGATA---T-TTG-----GATGCAGGGTGAAGCTACTAATCAACCGGCAGACTGGCGAGGCTGTGGCCATGAAAA
dm3 chr2L:16691693-16691950 + CCCGG-----T--------------------GTC------------------GTCCGGGTCCGGGGA-ATTCGAGGAA---------TACGGGAG------------------TACGACCAAAGACAGACAGA---------------CGGCATACGGC--------GCACTCAATGCGCCCGGAC--GGAGAGCAGTCGATACACAGACA---C-----------------------------------CA--------------------GCGTTGCAG---CTGC-------------AG-TT--GCAGTTCGTCCTG-----------------------------CAGCCG---------TCGT---ATAT------CCGTT---ACTAATCCCC-GAACTAT-------------------TGTATATCCGATA---T-TTG-----GATGCAGGGTAAAGCTACTAATCAACCGGCAGACTGGCGAGGCTGTGGCCATGAAAA
droEre2 scaffold_4845:19761415-19761673 + CCCGG-----T--------------------GTCCG------G---------GTCCGGGTCCGGGGA-ATTTGAGGAA---------TACGGGAG------------------TACGACTAACGACAGACAGA---------------CGGCATACGGC--------GCACTCAATGCACCCGGAC--GGAGAGCAGTCGATACACAGACA---CA----------------------------------------------------GACAGTGTGGCAG---CTGC-------------AG-TT--GCAGCTCCTCCTG-----------------------------CAGCCG---------TCGT---ATAT------CCGTT---ACTAATCCCC-GTACTAT------------------------ATCCGATA---T-TTG-----GATGCAGGGTAAAGCTGCTAATCAACCGGCAGACCGGCGAGGCTGTGGCCATGAAAA
droYak3 2R:4411155-4411399 - CCCGG-----T--------------------GTCCG------G---------GTCCGGGTCCGGGGA-ATTTGAGGAA---------TACGGGAG------------------TACGACTAACGACAGACA--------------------------GC--------GCACTCAATGCACCCGGAC--GGAGAGCAGTCATTACACAGACA---C-----------------------------------CA--------------------GTGTTGCAG---CTGC-------------AG-TT--GCAGCTCGTCCTG-----------------------------CAGTCG---------TCGT---ATAT------CCTTT---ACTAATCCCC-AAACTAT------------------------ATCCGATA---T-TTG-----GATGCAGGGTAAAGCTGCTAATCAACCGGCAGACGGGCGAAGCTGTGGCCATGAAAA
droEug1 scf7180000408961:265721-265965 + CCCGG-----T--------------------GTCC---------------------GGGTCCGGGAA-GTTCGAGGAA---------TACGGGAG------------------TACCACTAACGACAGACGGA---------------CGTCATACGGC--------GCACTCAATGCACCCGGAC--GGAGAGCAGTCGATACACAGACA---C-----------------------------------CA--------------------ACGTTGCAA---CTGC-------------A---------GTTCGTCCTC-----------------------------TAGCCG---------TCAT---ATAT------CACTT---ACTAATCCCACCGACTAT------------------------ATCCGTTA---T-GTT-----AATGCAGGGTAAAGCTGCTAATCAACCGACAGACTGGAGAGGCAGTGGCCATGAAAA
droBia1 scf7180000301468:850931-851197 + CCCGG-----T--------------------GTCCC------G---------GTTCGGGTCCGGGGA-ATTCGAGGAA---------TACGGGAG------------------TACAGCGAACGACAGACAGACCGACACACGGCGTACGACATGCGGC--------GCACTCGATGCACCCGGAC--GGAGAGCAGTCGATACACAGACA---C-----------------------------------CA--------------------GCGCCGCAG---CTGC-------------AG-TT--GCAGTTCGTCCTGCGGCACATTG---------------------------------------------------CGCCT---ACTAATCCCC--GACCCT------------------------ATCCGCTG---TCCTC-----GATGCAGGGTGAAGCTGCTAATCAACCGGCAGACTGGCGAGGCTGTGGCCATGAAAA
droTak1 scf7180000415914:415953-416218 + CCCGG-----T--------------------GTC-------------------TCGGGATCCGGGGA-ATTTGAGGAA---------TACGGGAG------------------TACGACGAACGACAGACAGAACGAC----------AGGCGTACGGG--------GCACTCGATGCACCCGGAC--GGAGAGCAGTCGATACACAGACA---G-----------------------------------CA--------------------ACGTTGCAA---CTGC-------------AA-CT--GCAGTTTGTCCGG-----------------------------CAGCCG---------TCGTCATATATACTCAACCCAT---ACTAATCCCA-CGACTAT------------------------ATCCGATA---T-CTT-----GATGCAGGGTGAAGCTGCTAATCAACCGGCAGACTGGCGAGGCTGTGGCCATGAAAA
droEle1 scf7180000490579:652218-652454 - CCCGG-----T--------------------ATCC---------------------GGGTCCGGGGA-ATTCGAGGAA---------CACAGGAC------------------TATT------------CAGA---------------CGGCATACGTC--------GCACTCAATGCAC-CGGAC--GGAGAGCAGTCGATACACAGACA---T-----------------------------------CA--------------------GTGTTGCAA---CTGC-------------AT-CT--GCAGTCCGTCCTG-----------------------------TAGTCT---------CGGT---ATAT------CCCTT---ACTAATCCCC-CGACAAT------------------------ATTCGATA---T-CTT-----AATGCAGGGTGAAGTTGTTAATCAACCGGCAGACTGGCGAGGCTGTGGCCATGAAAA
droRho1 scf7180000768553:2791-3027 + CCCGG-----T--------------------ATCC---------------------GGGTCCGGGGA-ATTTGAGGAA---------CACGGGAG------------------TATT------------CAGA---------------TAGCATACGGC--------GCACTCAATGCAC-CGGAC--GGAGAGCAGTCGATACACAGACA---C-----------------------------------CA--------------------GTGTTGCAA---CTGC-------------AA-CT--GCAGTCCTTCCTG-----------------------------TAGTCG---------CAGT---ATAT------CCCTT---TCTAATCCCC-CGACAAT------------------------ATTCGATT---T-CTT-----AATGCAGGGTGAAGCTGCTAATCAACCGGCAGACTGGGGAGGCTGTGGCCATGAAAA
droFic1 scf7180000454078:618207-618479 + CCCGG-----T--------------------GTCCG------G---------ATCTGGGTCCGGGGA-ATTTGAGGAA---------TACGGGAG------------------TACGACCAACGACAGACAGA---------------CGGCATACGGT--------ACACTCAATCCACCCGGAC--GGAGAGCAGTCGATACACAGACA---C-----------------------------------CA--------------------ACGTTGCAA---CTGC-------------ACACT--GCAGTTAGCT---AGCCACGCTG-------------------CAGCCGCACTCGTACTCGC---ATAT------CCATT---GCTAATACAC-CGACAAT------------------------ATCCGATA---T-TTT-----AATGCAGGGTTAAGCTGCTAATCAACCGACAGACTGGCGAGGCCGTGGCCATGAAAA
droKik1 scf7180000302382:522581-522832 + CCCGG-----T--------------------GTCC---------------------GGATCCGGGGA-ATTCGAGGAA---------TAAGGGAG------------------CACGAC------------AA---------------TGGCATACGGC--------AGACTCACTGCACCCGGACCCGGAGAGCAGTCGATACACAGACA---C-----------------------------------CA--------------------AAGTTGCAA---CTGC-------------AT-TC-GGCAGAGTCACCTC-----------------------------CCGCGC---------TCGAAA-AAAT------CCCTC---ACTAATCCTT-TGATG-------------CCTCTATT-----CTTGGATACTGT-TGT-----GATGCAGGGTGAAGCTGCTAATCAATCGACAGACTGGCGAGGCTGTGGCCATGAAAA
droAna3 scaffold_12916:15871187-15871438 - CTTGT-----CTCGAAAGGGGAG--------A---------------------TCCGGGTCCGGGGA-ATACG---AA---------TACG--AG------------------TACG------------TACA---------------CTGCACACTGCACCCGGACACAGACAC-GGACCCGGACCCGGAGAACAGTCGATACACAGACA---C-----------------------------------CA--------------------GCCTTGCAA---CTGC-------------AA-CT--TC---------TG-----------------------------TATCTC---------ACAG---ATAT------CCCTCGAAACTAATCCCTCCGATACTATCT--------------------ATCCCAT----T-TAC-----GATGCAGGGTGAAGTTGCTAATCAACCGACAGACTGGCGAGGCTGTGGCCATGAAAA
droBip1 scf7180000396717:109137-109414 - CTTGC-----CAC-AAAG--GCGATCCGAGTGTGC---------------------GGGTCCGGGGA-ATAC--GGAA---------TACGG-AA------------------TACG---------------A---------------TGGCATACGGCATCC--ACACACTCACTGCACCCGGAC--CTCGAACAGTCGATACCCAGACA---C-----------------------------------CA----------------GACAGCGTTGCAACAACTGCGTTGTTGAACTGCAA-CT-AGCATTTA------AGATTTCT-G-------------------TATCTC---------ATAG---ATAC------ACCTT-ACTCTAATCCCTCCGATAAT------------------------ATC-------TC-TAT-----GATGCAGGGTAAAGTTGCTAATCAACCGACAGACTGGCGAGGCTGTGGCCATGAAAA
dp5 4_group3:8434679-8434922 + CCATGG----C--------------------GGCGGCATCCTG---------ACATCCCGCCGCCGA-A-ACGGGGAA---------CACGGCAC------------------TGCCAC---------------------------------------------------------------------ACGGACCAGTCGCTGCACAGACG---A-----------------------------------CA-------------CCGAACCGAGTTGCAA---GTGC-------------AG-CAATGCAGTTTCCC---CGATTTGTTG---------------------------------------------------CAATA---GCTAATCCCT-GCGCTTTATCTCCTTACTTCCCTTTTCTGTG--------TGGC-TGTGTGGAAATGCAGAGTGAAGCTGCTCATCAATCGGCAGACGGGCGAAGCTGTGGCCATGAAGA
droPer2 scaffold_1:9885914-9886122 + AC----------------------------------------------------------------------GGGGAA---------CACGGCAC------------------TGCCAC---------------------------------------------------------------------ACGGACCAGTCGCTGCACAGACG---A-----------------------------------CA-------------CCGAACCGAGTTGCAA---GTGC-------------AG-CAATGCAGTTTTCC---CGATTTGTTG---------------------------------------------------CAATA---GCTAATCCCT-GCGCTTTATCTCCTTACTTCCCTTTTCCGTG--------TGGC-TGTGTGGAAATGCAGAGTGAAGCTGCTCATCAATCGGCAGACGGGCGAAGCTGTGGCCATGAAGA
droWil2 scf2_1100000004945:881733-882000 - CCATGGCGGCT--------------------ACTC---------------------ACTTATCACAA-AGTGGAGGGAGCCATCATCTCTGGGAGCCAAC-------------TGCAG-CAACTGCAGACAGACGCACCGA-------CGGGATAC---------------------------------CGAACCAGTCGATACACACACT---TT-------GCG------------------------CA--------------------GTGTTGCAC---TT----------------------------TATC--G-CATTTA-AA----CAATAATTCTCCATAAACCCA---------CCAC---ACGT------CCGTT---ACGCTTCGTT-CAATTAT-------------------CAAAAATGTTGTA---T-T--------TTGCAGAGTTAAATTGCTCATCAATCGCCAAACTGGCGAGGCTGTGGCCATGAAAA
droVir3 scaffold_12963:12865448-12865648 - dvi_11559 CCAAC-----T--------------------ATGA---------------------GGCATCGGA---AGTGG-----------------------TAACAGGAG--------CAG------------------------------------------T--------GCACT-------------------AACCAGTCTCGGCACACGAGACAAAG-CAGAC-------------------GCAGGCGGGG--------------------GGATTTCAA---ATGC-------------AC-TG--GCAAATTTTCCCG-----------------------------CAGCAA---------AATT---A--------------------------A-AGAGAA-------------------------ATCTTATC--TT-TCT-----GGCGCAGAGTCAAGCTGCTTATCAATCGTCAGACGGGAGAGGCCGTGGCCATGAAAA
droMoj3 scaffold_6500:7199745-7199999 + CCAAC-----T--------------------ACGA---------------------AGCTTCGGTAA-AATGG-----------------------CAACAGGAGCACTGCACTG--------------------------------------------------------------CATCCAGTC--AA----------------AGACA---AAGACAGAC--TGAATGGGGATAGGGGTACAGGTGGGG--------------------GTG-------------------------------GGGAAATTCTCA---TTGTCGATTGCATTGACTAATTTTTCCGACAGCAT---------ACGATACTAACATAAAACTCA-------------C-AGAGCA------------ACCCAATTAT---TTGTATC---TTTCTT-----GGCGCAGAGTCAAATTGCTTATCAATCGCCAGACGGGAGAAGCTGTGGCCATGAAAA
droGri2 scaffold_14978:828868-829136 + GCAGC-----T--------------------TCTCGCAGCTTGATATTTGTAGTGCGCATGCGACGAAATTGG-----------------------TAACAGGAG--------CACT------------GAG------------------------CAC--------CAACTGATTGCACCAC--------AACCAGTCGATACACAGACA---AAGACGGTAGCGGATT-------------------GGGGGCAACTGCCACAG------CCACTGCAA---CTGC-------------AA-CT--GCTGCAC------------------------------------TGTCC---------AAAT---TTTC------CACTT---ACTAAATGCA-AGCGAAT------------------------CTTGTTTATCTT-TGT--GG-TGCGCAGAGTCAAGTTGCTTATAAATCGACAGACGGGCGAGGCTGTGGCCATGAAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCCGG-----T--------------------GTCC---------------------GGGTCCGGGGA-ATTCGAGGAA---------TACGGGAG------------------TACGACTAACGACAGACAGA---------------CGGCATACGGC--------GCACTCAATGCACCCGGAC--GGAGAACAGTCGATACACAGACA---C-----------------------------------CA--------------------GCGTTGCAG---CTGC-------------AG-TT--GCAGTTCGTCCTG-----------------------------CAGCGG---------TCGT---ATAT------CCGTT---ACTAATCCCC-GAACTAT------------------------ATCCGATA---T-TTG-----GATGCAGGGTGAAGCTACTAATCAACCGGCAGACTGGCGAGGCTGTGGCCATGAAAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................GACA---C-----------------------------------CA--------------------GCGTTGCAG---CTG...............................................................................................................................................................................................................................1912.00220000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGCGAGGCTGTGGC........1711.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCAACCGGCAGACTGGCGAG................2311.00100000000001000000
................................................................................................................................................................................................................................................................................................................TT--GCAGTTCGTCCTG-----------------------------CAGC............................................................................................................................................................1911.00100000100000000000
............................................................................................................................................................................................GGAGAACAGTCGATACAC................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAATCAACCGGCAGACTGGCGAGG...............2711.00100000010000000000
..................................................................................................................................................................................ACCCGGAC--GGAGAACAGTCGATACACA...............................................................................................................................................................................................................................................................................................................2711.00110000000000000000
..............................................................................................................................................................................................................................................................................................GC-------------AG-TT--GCAGTTCGTCCTG-----------------------------................................................................................................................................................................1911.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TCCCC-GAACTAT------------------------ATCCGATA---T-TTG-----GA.......................................................2611.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCGAGGCTGTGGA........1650.20100000000100000000
droSec2
CCCGG-----T--------------------GTCC---------------------GGGTCCGGGGA-ATTCGAGGAA---------TACGGGAG------------------TACGACTAACGACAGACAGA---------------CGGCATACGGC--------GCACTCAATGCACCCGGAC--GGAGAACAGTCGATACACAGACA---C-----------------------------------CA--------------------GCGTTGCAG---CTGC-------------AG-TT--GCAGTTCGTCCTG-----------------------------CAGCGG---------TCGT---ATAT------CCGTT---ACTAATCCCC-GAACTAT------------------------ATCCGATA---T-TTG-----GATGCAGGGTGAAGCTACTAATCAACCGGCAGACTGGCGAGGCTGTGGCCATGAAAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................AGTTCGTCCTG-----------------------------CAGCGG---------TCG..............................................................................................................................................2011.0010001
dm3
CCCGG-----T--------------------GTC------------------GTCCGGGTCCGGGGA-ATTCGAGGAA---------TACGGGAG------------------TACGACCAAAGACAGACAGA---------------CGGCATACGGC--------GCACTCAATGCGCCCGGAC--GGAGAGCAGTCGATACACAGACA---C-----------------------------------CA--------------------GCGTTGCAG---CTGC-------------AG-TT--GCAGTTCGTCCTG-----------------------------CAGCCG---------TCGT---ATAT------CCGTT---ACTAATCCCC-GAACTAT-------------------TGTATATCCGATA---T-TTG-----GATGCAGGGTAAAGCTACTAATCAACCGGCAGACTGGCGAGGCTGTGGCCATGAAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACTAATCAACCGGCAGACT......................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGGCAGACTGGCGAGG...............1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAATCAACCGGCAGACTGGCGAG................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACTAATCAACCGGCAGACTGGCGAG................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGGCAGACTGGCGAGGCT.............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACCGGCAGACTGGCGAGGC..............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TCCGGGGA-ATTCGAGGAA---------TACGGGAG------------------.............................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAATCAACCGGCAGACTGGCGAG................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCAACCGGCAGACTGGCG..................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCAACCGGCAGACTGGCGAGG...............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCAACCGGCAGACTGGCGAGGC..............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAACCGGCAGACTGGCGAGGG..............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAATCAACCGGCAGACTGGCGAGGC..............2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................AGTCGATACACAGACA---C-----------------------------------CA--------------------GCG...........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TACGGGAG------------------TACGACCAAAGACAGACAGA---------------C.........................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CCCGGAC--GGAGAGCAGTCGATACACAGA.............................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................ACAGACA---C-----------------------------------CA--------------------GCGTTGCAG---CT................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................................................................................................................................TG-----------------------------CAGCCG---------TCGT---ATAT------CCGTT---........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................A---T-TTG-----GATGCAGGGTAAAGCT.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TATATCCGATA---T-TTG-----GATGCAGGGTAAAGC..........................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCCTG-----------------------------CAGCCG---------TCGT---ATAT------CCGTT---A.......................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TATCCGATA---T-TTG-----GATGCAG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGCGAGGCTGTGGCCATG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATCAACCGGCAGACTGGCGAGGCT.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACTAATCAACCGGCAGACTGGCGAGGC..............3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GACCAAAGACAGACAGA---------------CG........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAATCAACCGGCAGACTGGCGAG................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................CATACGGC--------GCACTCAATG.............................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTG-----GATGCAGGGTAAAGCT.........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCGAGGCTGTGGCCATG....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CGGGGA-ATTCGAGGAA---------TACGG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAATCAACCGGCAGACTGGCGA.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGGCAGACTGGCGAGGA..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGACTGGCGAGGCTGTGGCC.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACTAATCAACCGGCA..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCGGCAGACTGGCGAGGCT.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................AAGACAGACAGA---------------CGGCATACGGC--------GCAC...................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTACTAATCAACCGGCAGACTGG....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCTACTAATCAACCGGCAGACTGGC...................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---T-TTG-----GATGCAGGGTAAAGCTACTAA....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................A---------TACGGGAG------------------TACGACCAAAGACAGAC............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGCTACTAATCAACCGGCAGA........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................CGGGAG------------------TACGACCAAAGACAGAC............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACCGGCAGACTGGCGAGGCTGTGG.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACCGGCAGACTGGCGAGGCT.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGCTACTAATCAAC...............................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTGGCGAGGCTGTGGCCATGAAAA2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................ACTAATCCCC-GAACTAT-------------------TGTAT..............................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................GGAC--GGAGAGCAGTCGAT....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GG-----T--------------------GTC------------------GTCCGGGTCCGGGGA-AT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGACTGGCGAGGCTGTGGCC.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGCTACTAATCAACCGGCAGACT......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGGCAGACTGGCGAGGCTGT...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATA---T-TTG-----GATGCAGGGTA..............................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TACGGC--------GCACTCAATGCGCCCGGAC--GGA...............................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GA-ATTCGAGGAA---------TACGGGAG------------------TAC..........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................TTCGAGGAA---------TACGGGAG------------------TACGACCAAA...................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CGTCCTG-----------------------------CAGCCG---------TCGT---ATAT------C...............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCGATA---T-TTG-----GATGCAGGGTA..............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...............................................................................................................................................................................................GAGCAGTCGATACACAGACA---C-----------------------------------CA--------------------GCGT..........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TACGGGAG------------------TACGACCAAAGACAGACA...........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................T--GCAGTTCGTCCTG-----------------------------CAGCCG---------TCGT---A.........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TACGACCAAAGACAGACAGA---------------CGGCAT....................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACTAATCAACCGGCAGACTGGCGA.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................CCGTT---ACTAATCCCC-GAACTAT-------------------TGTATA.............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................GCCCGGAC--GGAGAGCAGT........................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGGCAGACTGGCGAGGCT.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TCCCC-GAACTAT-------------------TGTATATCCG.........................................................................2211.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACTAATCAACCGGCAGACTGGC...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TG-----------------------------CAGCCG---------TCGT---ATAT------CCGT............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGGCAGACTGGCGAGGCTGTGGG........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GATACACAGACA---C-----------------------------------CA--------------------GCGT..........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGGCGAGGCTGTGGATC......2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCCGG-----T--------------------GTCCG------G---------GTCCGGGTCCGGGGA-ATTTGAGGAA---------TACGGGAG------------------TACGACTAACGACAGACAGA---------------CGGCATACGGC--------GCACTCAATGCACCCGGAC--GGAGAGCAGTCGATACACAGACA---CA----------------------------------------------------GACAGTGTGGCAG---CTGC-------------AG-TT--GCAGCTCCTCCTG-----------------------------CAGCCG---------TCGT---ATAT------CCGTT---ACTAATCCCC-GTACTAT------------------------ATCCGATA---T-TTG-----GATGCAGGGTAAAGCTGCTAATCAACCGGCAGACCGGCGAGGCTGTGGCCATGAAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................AGAGCAGTCGATACACAGACA---CA----------------------------------------------------..................................................................................................................................................................................................................................................2311.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGGCGAGGCTGTGGCCATGAA..2311.0010000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGCTGCTAATCAACC..............................1911.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAACCGGCAGACCGGC...................1911.0011000000
droYak3
CCCGG-----T--------------------GTCCG------G---------GTCCGGGTCCGGGGA-ATTTGAGGAA---------TACGGGAG------------------TACGACTAACGACAGACA--------------------------GC--------GCACTCAATGCACCCGGAC--GGAGAGCAGTCATTACACAGACA---C-----------------------------------CA--------------------GTGTTGCAG---CTGC-------------AG-TT--GCAGCTCGTCCTG-----------------------------CAGTCG---------TCGT---ATAT------CCTTT---ACTAATCCCC-AAACTAT------------------------ATCCGATA---T-TTG-----GATGCAGGGTAAAGCTGCTAATCAACCGGCAGACGGGCGAAGCTGTGGCCATGAAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
CCCGG-----T--------------------GTCC---------------------GGGTCCGGGAA-GTTCGAGGAA---------TACGGGAG------------------TACCACTAACGACAGACGGA---------------CGTCATACGGC--------GCACTCAATGCACCCGGAC--GGAGAGCAGTCGATACACAGACA---C-----------------------------------CA--------------------ACGTTGCAA---CTGC-------------A---------GTTCGTCCTC-----------------------------TAGCCG---------TCAT---ATAT------CACTT---ACTAATCCCACCGACTAT------------------------ATCCGTTA---T-GTT-----AATGCAGGGTAAAGCTGCTAATCAACCGACAGACTGGAGAGGCAGTGGCCATGAAAASizeHit CountTotal NormTotal
No Reads
droBia1
CCCGG-----T--------------------GTCCC------G---------GTTCGGGTCCGGGGA-ATTCGAGGAA---------TACGGGAG------------------TACAGCGAACGACAGACAGACCGACACACGGCGTACGACATGCGGC--------GCACTCGATGCACCCGGAC--GGAGAGCAGTCGATACACAGACA---C-----------------------------------CA--------------------GCGCCGCAG---CTGC-------------AG-TT--GCAGTTCGTCCTGCGGCACATTG---------------------------------------------------CGCCT---ACTAATCCCC--GACCCT------------------------ATCCGCTG---TCCTC-----GATGCAGGGTGAAGCTGCTAATCAACCGGCAGACTGGCGAGGCTGTGGCCATGAAAASizeHit CountTotal NormTotal
No Reads
droTak1
CCCGG-----T--------------------GTC-------------------TCGGGATCCGGGGA-ATTTGAGGAA---------TACGGGAG------------------TACGACGAACGACAGACAGAACGAC----------AGGCGTACGGG--------GCACTCGATGCACCCGGAC--GGAGAGCAGTCGATACACAGACA---G-----------------------------------CA--------------------ACGTTGCAA---CTGC-------------AA-CT--GCAGTTTGTCCGG-----------------------------CAGCCG---------TCGTCATATATACTCAACCCAT---ACTAATCCCA-CGACTAT------------------------ATCCGATA---T-CTT-----GATGCAGGGTGAAGCTGCTAATCAACCGGCAGACTGGCGAGGCTGTGGCCATGAAAASizeHit CountTotal NormTotal
No Reads
droEle1
CCCGG-----T--------------------ATCC---------------------GGGTCCGGGGA-ATTCGAGGAA---------CACAGGAC------------------TATT------------CAGA---------------CGGCATACGTC--------GCACTCAATGCAC-CGGAC--GGAGAGCAGTCGATACACAGACA---T-----------------------------------CA--------------------GTGTTGCAA---CTGC-------------AT-CT--GCAGTCCGTCCTG-----------------------------TAGTCT---------CGGT---ATAT------CCCTT---ACTAATCCCC-CGACAAT------------------------ATTCGATA---T-CTT-----AATGCAGGGTGAAGTTGTTAATCAACCGGCAGACTGGCGAGGCTGTGGCCATGAAAASizeHit CountTotal NormTotal
No Reads
droRho1
CCCGG-----T--------------------ATCC---------------------GGGTCCGGGGA-ATTTGAGGAA---------CACGGGAG------------------TATT------------CAGA---------------TAGCATACGGC--------GCACTCAATGCAC-CGGAC--GGAGAGCAGTCGATACACAGACA---C-----------------------------------CA--------------------GTGTTGCAA---CTGC-------------AA-CT--GCAGTCCTTCCTG-----------------------------TAGTCG---------CAGT---ATAT------CCCTT---TCTAATCCCC-CGACAAT------------------------ATTCGATT---T-CTT-----AATGCAGGGTGAAGCTGCTAATCAACCGGCAGACTGGGGAGGCTGTGGCCATGAAAASizeHit CountTotal NormTotal
No Reads
droFic1
CCCGG-----T--------------------GTCCG------G---------ATCTGGGTCCGGGGA-ATTTGAGGAA---------TACGGGAG------------------TACGACCAACGACAGACAGA---------------CGGCATACGGT--------ACACTCAATCCACCCGGAC--GGAGAGCAGTCGATACACAGACA---C-----------------------------------CA--------------------ACGTTGCAA---CTGC-------------ACACT--GCAGTTAGCT---AGCCACGCTG-------------------CAGCCGCACTCGTACTCGC---ATAT------CCATT---GCTAATACAC-CGACAAT------------------------ATCCGATA---T-TTT-----AATGCAGGGTTAAGCTGCTAATCAACCGACAGACTGGCGAGGCCGTGGCCATGAAAASizeHit CountTotal NormTotal
No Reads
droKik1
CCCGG-----T--------------------GTCC---------------------GGATCCGGGGA-ATTCGAGGAA---------TAAGGGAG------------------CACGAC------------AA---------------TGGCATACGGC--------AGACTCACTGCACCCGGACCCGGAGAGCAGTCGATACACAGACA---C-----------------------------------CA--------------------AAGTTGCAA---CTGC-------------AT-TC-GGCAGAGTCACCTC-----------------------------CCGCGC---------TCGAAA-AAAT------CCCTC---ACTAATCCTT-TGATG-------------CCTCTATT-----CTTGGATACTGT-TGT-----GATGCAGGGTGAAGCTGCTAATCAATCGACAGACTGGCGAGGCTGTGGCCATGAAAASizeHit CountTotal NormTotal
No Reads
droAna3
CTTGT-----CTCGAAAGGGGAG--------A---------------------TCCGGGTCCGGGGA-ATACG---AA---------TACG--AG------------------TACG------------TACA---------------CTGCACACTGCACCCGGACACAGACAC-GGACCCGGACCCGGAGAACAGTCGATACACAGACA---C-----------------------------------CA--------------------GCCTTGCAA---CTGC-------------AA-CT--TC---------TG-----------------------------TATCTC---------ACAG---ATAT------CCCTCGAAACTAATCCCTCCGATACTATCT--------------------ATCCCAT----T-TAC-----GATGCAGGGTGAAGTTGCTAATCAACCGACAGACTGGCGAGGCTGTGGCCATGAAAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................TACACAGACA---C-----------------------------------CA--------------------GCCTTGC.......................................................................................................................................................................................................................................2011.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTAATCAACCGACAGACT......................2111.001100000
droBip1
CTTGC-----CAC-AAAG--GCGATCCGAGTGTGC---------------------GGGTCCGGGGA-ATAC--GGAA---------TACGG-AA------------------TACG---------------A---------------TGGCATACGGCATCC--ACACACTCACTGCACCCGGAC--CTCGAACAGTCGATACCCAGACA---C-----------------------------------CA----------------GACAGCGTTGCAACAACTGCGTTGTTGAACTGCAA-CT-AGCATTTA------AGATTTCT-G-------------------TATCTC---------ATAG---ATAC------ACCTT-ACTCTAATCCCTCCGATAAT------------------------ATC-------TC-TAT-----GATGCAGGGTAAAGTTGCTAATCAACCGACAGACTGGCGAGGCTGTGGCCATGAAAASizeHit CountTotal NormTotal
No Reads
dp5
CCATGG----C--------------------GGCGGCATCCTG---------ACATCCCGCCGCCGA-A-ACGGGGAA---------CACGGCAC------------------TGCCAC---------------------------------------------------------------------ACGGACCAGTCGCTGCACAGACG---A-----------------------------------CA-------------CCGAACCGAGTTGCAA---GTGC-------------AG-CAATGCAGTTTCCC---CGATTTGTTG---------------------------------------------------CAATA---GCTAATCCCT-GCGCTTTATCTCCTTACTTCCCTTTTCTGTG--------TGGC-TGTGTGGAAATGCAGAGTGAAGCTGCTCATCAATCGGCAGACGGGCGAAGCTGTGGCCATGAAGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................G--------TGGC-TGTGTGGAAATGCAG..................................................2012.0020000000200
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGACGGGCGAAGCTGTGGCCATG....2611.0010100000000
droPer2
AC----------------------------------------------------------------------GGGGAA---------CACGGCAC------------------TGCCAC---------------------------------------------------------------------ACGGACCAGTCGCTGCACAGACG---A-----------------------------------CA-------------CCGAACCGAGTTGCAA---GTGC-------------AG-CAATGCAGTTTTCC---CGATTTGTTG---------------------------------------------------CAATA---GCTAATCCCT-GCGCTTTATCTCCTTACTTCCCTTTTCCGTG--------TGGC-TGTGTGGAAATGCAGAGTGAAGCTGCTCATCAATCGGCAGACGGGCGAAGCTGTGGCCATGAAGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGC-TGTGTGGAAATGCAG..................................................1911.001000010
droWil2
CCATGGCGGCT--------------------ACTC---------------------ACTTATCACAA-AGTGGAGGGAGCCATCATCTCTGGGAGCCAAC-------------TGCAG-CAACTGCAGACAGACGCACCGA-------CGGGATAC---------------------------------CGAACCAGTCGATACACACACT---TT-------GCG------------------------CA--------------------GTGTTGCAC---TT----------------------------TATC--G-CATTTA-AA----CAATAATTCTCCATAAACCCA---------CCAC---ACGT------CCGTT---ACGCTTCGTT-CAATTAT-------------------CAAAAATGTTGTA---T-T--------TTGCAGAGTTAAATTGCTCATCAATCGCCAAACTGGCGAGGCTGTGGCCATGAAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................AGACAGACGCACCGA-------CGG.......................................................................................................................................................................................................................................................................................................................................................................1811.00100001
droVir3
CCAAC-----T--------------------ATGA---------------------GGCATCGGA---AGTGG-----------------------TAACAGGAG--------CAG------------------------------------------T--------GCACT-------------------AACCAGTCTCGGCACACGAGACAAAG-CAGAC-------------------GCAGGCGGGG--------------------GGATTTCAA---ATGC-------------AC-TG--GCAAATTTTCCCG-----------------------------CAGCAA---------AATT---A--------------------------A-AGAGAA-------------------------ATCTTATC--TT-TCT-----GGCGCAGAGTCAAGCTGCTTATCAATCGTCAGACGGGAGAGGCCGTGGCCATGAAAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCAAGCTGCTTATCAATCGTCA..........................2411.001000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................CACACGAGACAAAG-CAGAC-------------------GCAGGCGGGG--------------------GGGG..........................................................................................................................................................................................................................................3311.001000000000000000000000000000000000000000000010000000000000000000
droMoj3
CCAAC-----T--------------------ACGA---------------------AGCTTCGGTAA-AATGG-----------------------CAACAGGAGCACTGCACTG--------------------------------------------------------------CATCCAGTC--AA----------------AGACA---AAGACAGAC--TGAATGGGGATAGGGGTACAGGTGGGG--------------------GTG-------------------------------GGGAAATTCTCA---TTGTCGATTGCATTGACTAATTTTTCCGACAGCAT---------ACGATACTAACATAAAACTCA-------------C-AGAGCA------------ACCCAATTAT---TTGTATC---TTTCTT-----GGCGCAGAGTCAAATTGCTTATCAATCGCCAGACGGGAGAAGCTGTGGCCATGAAAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GCAGC-----T--------------------TCTCGCAGCTTGATATTTGTAGTGCGCATGCGACGAAATTGG-----------------------TAACAGGAG--------CACT------------GAG------------------------CAC--------CAACTGATTGCACCAC--------AACCAGTCGATACACAGACA---AAGACGGTAGCGGATT-------------------GGGGGCAACTGCCACAG------CCACTGCAA---CTGC-------------AA-CT--GCTGCAC------------------------------------TGTCC---------AAAT---TTTC------CACTT---ACTAAATGCA-AGCGAAT------------------------CTTGTTTATCTT-TGT--GG-TGCGCAGAGTCAAGTTGCTTATAAATCGACAGACGGGCGAGGCTGTGGCCATGAAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:01 AM