ID:

dsi_17737

 Coordinate:

2l:9594765-9594914 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.0 -21.7 -21.6

Flybase annnotation

exon [2l_9594915_9594984_-]; five_prime_UTR [2l_9594915_9594984_-]; intron [2l_9594575_9594914_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCGGCCATTTCGTTTTTGTCTTCACCCCAATAAAGTTGATAGACCTACAAGTAAGCATTTTGGGTTAGATTATGTGGGAAATAAATTGTGTTTAATTTAATCAACGTGCGCAATAGCACAGGCAGAGTTTTGAAATATGCTAAAAGCTAGCTAAAAGTGTAAAAATCCAAGTGATGGGATGCATCTTTCGTAAAAATCAATTGCCCCTTTGGGACACCACGTGTTCCAAAATGGCGACTATATGTAGAAT
***********************************************************...((((((((((..((.((......)).))..))))))))))...((((......)))).(((..((((((...........)))))).)))....((((....((((........)))))))).***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 M025
embryo
 O002
Head
 M024
male body		 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR902009
testis
 GSM343915
embryo
..............TTTGTCTTCACCCCAATAAAGTTGA................................................................................................................................................................................................................... 25 0 1 19.00 19 0 4 10 0 3 2 0 0 0 0 0 0 0 0
........TTCGTTTTTGTCTTCACCCCAATAAAGT...................................................................................................................................................................................................................... 28 0 1 11.00 11 0 3 0 4 1 1 2 0 0 0 0 0 0 0
.........................CCCAATAAAGTTGATAGAC.............................................................................................................................................................................................................. 19 0 1 9.00 9 8 0 0 0 0 0 0 0 0 1 0 0 0 0
.............TTTTGTCTTCACCCCAATAAAGTTGA................................................................................................................................................................................................................... 26 0 1 8.00 8 0 3 1 0 3 1 0 0 0 0 0 0 0 0
.................................AGTTGATAGACCTACAAG....................................................................................................................................................................................................... 18 0 1 7.00 7 4 0 0 1 0 0 0 0 2 0 0 0 0 0
...............TTGTCTTCACCCCAATAAAGTTGA................................................................................................................................................................................................................... 24 0 1 6.00 6 0 4 1 0 1 0 0 0 0 0 0 0 0 0
........................CCCCAATAAAGTTGATAGAC.............................................................................................................................................................................................................. 20 0 1 5.00 5 3 0 0 0 0 0 0 1 0 1 0 0 0 0
........TTCGTTTTTGTCTTCACCCCAATAA......................................................................................................................................................................................................................... 25 0 1 5.00 5 0 0 1 0 1 1 2 0 0 0 0 0 0 0
.....CATTTCGTTTTTGTCTTCACCCCAATA.......................................................................................................................................................................................................................... 27 0 1 4.00 4 0 1 3 0 0 0 0 0 0 0 0 0 0 0
.....TTTTTCGTTTTTGTCTTCACCCCAATA.......................................................................................................................................................................................................................... 27 2 1 3.00 3 0 1 2 0 0 0 0 0 0 0 0 0 0 0
..........................CCAATAAAGTTGATAGAC.............................................................................................................................................................................................................. 18 0 1 3.00 3 2 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................TCACCCCAATAAAGTTGATAGACCTAC.......................................................................................................................................................................................................... 27 0 1 3.00 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0
.........TCGTTTTTGTCTTCACCCCAATAAAGT...................................................................................................................................................................................................................... 27 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0
.......TTTCGTTTTTGTCTTCACCCCAATAAAGT...................................................................................................................................................................................................................... 29 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0
................TGTCTTCACCCCAATAAAGTTGA................................................................................................................................................................................................................... 23 0 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0
............TTTTTGTCTTCACCCCAATAAAGTTGA................................................................................................................................................................................................................... 27 0 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0
...................CTTCACCCCAATAAAGTT..................................................................................................................................................................................................................... 18 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
......TTTTCGTTTTTGTCTTCACCCCAATA.......................................................................................................................................................................................................................... 26 1 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................CCAATAAAGTTGATAGACC............................................................................................................................................................................................................. 19 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.............TTTTGTCTTCACCCCAATAAAGTT..................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............TTTTGTCTTCACCACAATAAAGTTGA................................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................ACCCCAATAAAGTTGATA................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................TCACCCCAATAAAGTTGATAGACCTA........................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................TACAAGTAAGCATTTTCGGTTGGATTA.................................................................................................................................................................................. 27 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............TTTTTGTCTTCACCCCAATAAAGTTGATA................................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................AGTAAGCATTTTGGGTTA....................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.........................CCCAATAAAGTTGATAGA............................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................CCAATAAAGTTGATAGACCTACAA........................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....TTTTTCGTTTTTGTCTTCACCCCAATAA......................................................................................................................................................................................................................... 28 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................CTTCACCCCAATAAAGTTGAT.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........GTTTTTGTCTTCACCCCAA............................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................CTTCACCCCAATAAAGTTGATAGAC.............................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................TGTCTTCACCCCAATAAAGTTGATAGA............................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................TTCACCCCAATAAAGTTGATA................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........CGTTTTTGTCTTCACCCCAATAAAGTT..................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................AGTTGATAGACCTACAAGTAA.................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................TGGGACGCATCTTTCGTAAAAATCA................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..........TTTTTTTGTCTTCACCCCAATAAAGT...................................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................ACCCCAATAAAGTTGATAGACCTA........................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........TTCGTTTTTGTCTTCACCCCAATAAAG....................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....TTTTTCGTTTTTGTCTTCACCCCAA............................................................................................................................................................................................................................ 25 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................CCCATAAAGTTGATAGAC.............................................................................................................................................................................................................. 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................CACCCCAATAAAGTTGATA................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....ATTTTCGTTTTTGTCTTCACCCCAATA.......................................................................................................................................................................................................................... 27 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................ACAATAAAGTTGATAGACC............................................................................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....TTTTTTCGTTTTTGTCTTCACCCCAATA.......................................................................................................................................................................................................................... 28 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........TTCGTTTTTGTCTTCACCCCAATA.......................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....CATTTCGTTTTTGTCTTCA.................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......TTTTCGTTTTTGTCTTCACCCCAATAAAGT...................................................................................................................................................................................................................... 30 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................TTGATAGACCTACAAGTAAGCATTTT............................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................ATAAAGTTGATAGACCTA........................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................TCACCCCAATAAAGTTGATAGACC............................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.........................CCCAATAAAGTTGATAGACC............................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TTGGGTTAGATTATGTGGGAAATAAAT.................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
......................CACCCCAATAAAGTTGATAGACCTAC.......................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TTCGGTTAGATTATGTGGGAA.......................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................AAAATCCAAGTGATGGGATGCATC................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................GGTTAGAATAAGTGGGA........................................................................................................................................................................... 17 2 19 0.42 8 0 3 4 0 0 1 0 0 0 0 0 0 0 0
.............................................................GGGTTAGAATAAGTGGGA........................................................................................................................................................................... 18 2 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
............................................................TGGGTTAGGTTATGTGGGT........................................................................................................................................................................... 19 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................GATAGATTATGTGGGA........................................................................................................................................................................... 16 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....TTTTTTCGTTTTTGTCTTCACCC............................................................................................................................................................................................................................... 23 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......TTTCGTTTTTGTCTTCAAA................................................................................................................................................................................................................................ 19 2 17 0.12 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................AGTCAGGATTTTGGCTTAGA..................................................................................................................................................................................... 20 3 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGCCGGTAAAGCAAAAACAGAAGTGGGGTTATTTCAACTATCTGGATGTTCATTCGTAAAACCCAATCTAATACACCCTTTATTTAACACAAATTAAATTAGTTGCACGCGTTATCGTGTCCGTCTCAAAACTTTATACGATTTTCGATCGATTTTCACATTTTTAGGTTCACTACCCTACGTAGAAAGCATTTTTAGTTAACGGGGAAACCCTGTGGTGCACAAGGTTTTACCGCTGATATACATCTTA
*****************************************************************...((((((((((..((.((......)).))..))))))))))...((((......)))).(((..((((((...........)))))).)))....((((....((((........)))))))).*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
.............AAAACAAAAGTGGGGTTATT......................................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0
............AAAAACAGAAGTGGGGTTAT.......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................................................................ATGGGCAAACCCTGTGG................................ 17 2 6 0.17 1 0 0 1 0
......................................................................................................................................................................................................................................TATCGCTGATATACAACT.. 18 2 6 0.17 1 0 0 0 1
............................................GATGTTCTTTCGTAAA.............................................................................................................................................................................................. 16 1 13 0.08 1 0 0 1 0
...................................................................................................................................................................................................................CCTATGGTGCACAGGG....................... 16 2 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:9594715-9594964 - dsi_17737 TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGCATTTTG------------------------------------------G-GTTA------------GATT--AT-GTGGGAAAT-AAATTGTGTTTAATTTAATCAACGTGCGCAATAGCACAGG-------------------------------------------------------CAGA-GTTTTGAAATATGCTAAAAGCT-AGCTAAA------------AGTGTAAAAATCCA-------------AGTGAT-GGGATGCATCTTTC-GTAAAAA----TCAATTGCCC---CTTT--------G-GGACACCACGTGTTCCAAAATGGCGACTAT-----------------------AT-G----------------------TAGAAT
droSec2 scaffold_3:5343175-5343424 - TCTGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGCATTTTC------------------------------------------G-GTTG------------GGTA--AT-GTGGGAAAT-AAATTGTGCTTAATTTAATCAGCGTGCGCAATAGCACACG-------------------------------------------------------CAGA-GTTTTGAAATATGCTAAAAGCT-ACCTAAA------------AGTGTAAAAATCCA-------------AGTGAT-GGGATGCATCTTTC-GTAAAAA----TCAATTGCCC---CTTT--------G-GGACACCACGTGTTCCAAAATGGCGACTAT-----------------------AT-G----------------------TAGAAT
dm3 chr2L:9897271-9897522 - TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGCATTTTC------------------------------------------G-GTTG------------GATT--AT-GTGGGAAAT-AAATGGTGTTTAATTTAATCAGCATGCGCCATACCACAGT-------------------------------------------------------CAGA-GTTTTGATATATGCTAAAAGCT-AGCTAAA------------AGTGTAAAAATCCA-------------AGTGAT-GGGTTGTATCTTTC-GTAAAAA----TCAATTGTCC---CTTTGG------G-GGACACCACGTGTTCCAAAATGGCGACTAT-----------------------AT-G----------------------TAGTAG
droEre2 scaffold_4929:10510959-10511207 - TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGCATTTTC------------------------------------------A-CTTG------------GATA--AA-GTGGGAAAT-AAGTTGTCTTTAATTTAAAAAGCATG-GCCATATCACAGA-------------------------------------------------------CAGA-GTTTTGTAATATGCTAAAAGCT-AGTTTAA------------AGTGTTGAATTCCG-------------AGTGAT-GGAGTGCATTTTTC-GTAAAAA----TCAATTGCCC---CTTT--------G-GTACACCACGTGTTCCAAAATGGCGACGAT-----------------------AT-G----------------------TAGAAC
droYak3 2L:12588718-12588965 - TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGCATTTTT------------------------------------------G-GTTG------------GAAA--AA-GTGTGAAAT-AAATTATCT--ATTTTAACCACTATGCGCCATGTTATAGT-------------------------------------------------------CAGA-GATCTTAAACATTCTTGAATCT-AGTTTAA------------AGTGTTGGAATGTC-------------AGTGAT-TGAGTATTATTTTC-GCAAAAA----TCGATTGCCC---CAAT--------G-GGACACCACGTGTTTCAAAATGGCGACGAT-----------------------AT-C----------------------TAGAAT
droEug1 scf7180000409554:5018851-5019095 + TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGAATTTTT------------------------------------------A-TATA------------AATG--TT-GTGAGAAAT-AATAGGTTTCTAAAAGAAA-AA-ATGTGCTTTTGCACAGC-------------------------------------------------------TAGT-ATTTTGAAAAATGCAAATAGCT-AATTTAA------------AGTTAAAAAACCAA-------------AGTGAT-TAAACGTATTTTCT-TAAAATA----TAAATTTTTC---CACT--------G-GGACACCACGTGTCTTAAAATGGCGACCAA-----------------------A--------------------------AGAAC
droBia1 scf7180000302408:3244866-3245124 + TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGAATTTAT------------------------------------------TGATTG------------GATT--TT-GGGGGAAAT-AATTAGTGACAAAGTACACTAA-ATGTGCTTCTTCATGGC-------------------------------------------------------CAGT-GAACTAAAAAATGTTATGAACT-AATTTAA------------AGGGTCAAATTCAA-------------AACGAT-GGACCTTCTTTCGT-ATAAAAA----TCAATTTTTC---CCTT--------T-GGACACCACGTGTTTCAAAATGGCGACGGA-----------TAGAAAATG---CC-G----------------------TGGAAT
droTak1 scf7180000415287:67988-68247 - TCTGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGTTTTTTA------------------------------------------AACTTA------------ATTT--TT-GTGGGAAAT-AAATGGTTTAAAAGTAGAGTAG-TTGTGCTTTTACATAGC-------------------------------------------------------CTGA-GTTATGAAAATTGTTATTGGCT-AATTTAA------------AGTTGAAATTTCTA-------------AACGAT-GGGGGTTTTTTATA-ATACGAA----TTGATTTGCC---CCTT--------G-GGACACCACGTGTTTCAAAATGGCGACGGA-----------TGAAAAATGC--TT-G----------------------CGGAAT
droEle1 scf7180000491186:2946815-2947077 - TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGATTTTGC------------------------------------------GAGTGT------------AATT--TT-AAGGGAATT-AATTGGTGTAAAAGTGAAGTAA-ATATGCTGTTGCACAGC-------------------------------------------------------CTGA-GCCCTCCGAAATGTTATTACCT-TATTTAA------------AGATGGAAATTAAA-------------CGTGAT-GGAGTGTATTTT-C-AAAAAAA----TCAATTCTTG---CTCT--------GTGGGCACCACGTGTTCCAAAATGGCGACGGG-----------AGTACA---------------AG-------TTTTAAAGGCGAAT
droRho1 scf7180000778085:6715-6969 + TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGATTTTGC------------------------------------------GAGTGT------------AATT--TT-ATGGGAATT-AATTGGTGTAGCAGTGAATTAA-ATGTGCTTTTGGACAGT-------------------------------------------------------CTGT-GTTTTGCAAAATGTTATTTGCT-AATTTAA------------TGTGGGAAATTAAA-------------CGTGAT-GGAGCGTATTTT-C-AAGAAAA----TCAATATTTC---CCTT--------G-GAGCACCACGTGTTTCAAAATGGCGACGCT-----------AGTGAA------AT-A----------------------TGGAAT
droFic1 scf7180000454144:314329-314571 - TCGGCCATTTCGTTT-TTCTCTC-CGACCG-AATAAAGTTGATAGACCTACAA-GTAAGAATTTTT------------------------------------------GGGTTA------------AATA--GT-GTGGGAAAT-AGTTAATAAAATAATGAAATCA-ATTTTATAGTGCATAGC-------------------------------------------------------CATT-GCATTCGCAAATGAAA--------------------------AC-TTAAAAATTAA---AATGAATATTCTTAAT-AAAGCGTATTTA-C-AACACAA----TCAATTTTTC---GCCT--------T-GGTCACCACGTGTTTTAAAATGGCGACTGC-----------TGAAA-------------------------------------AA
droKik1 scf7180000302472:2288383-2288651 - TCGTCCATTTCGTTT-TCGTCTT-CTCCCC-AATAAAGTTGATAGACCTACAA-GTAAGATTTTCA------------------------------------------ATGTTT------------AATT--TTGGTGTGAAAT-AGACCATTTAAGAGAATATTAACTAGTGC-TCAGCAAAGC-------------------------------------------------------CATG-AATTTGAAGAACGTTAATAGCC-TAATTTC------------AATGAGAAATGCCT-------------CGAGAT-CAAGTATATTTTTA--AGAGAATGTGTAGCTTGACC--CAAGT-G------G-TGTCACCACGTGTTTCAAAATGGCGACAGC-----------TGAGAA---------------AA-------TATGTGAATCGAAT
droAna3 scaffold_12916:5501529-5501794 + TCGTTCATTTCGTTT-TTGTCTT-CATCCC-GAAAAAGTTGATAGACCTACAA-GTAAGCATCTGA------------------------------------------AAATTG------------AATT-TAT-TTGGCCTACTAC-CCAAATAAAATATAAATAA-ATGGCTTATTGCAT--T-------------------------------------------------------CTTGATACTTGCAGTTTGGTATTTGATTTATTTTT------------TATTTGAAAAACAA-------------AACGAT-TAAGCTTATTTTTA-AACTAA-------AACTGCCA---AGCT--------G-AAGCACCACGTGTCTCAAAATGGCGACCAT-----------------------TTTATTGAAATTA-----TTTTTTGTTCTCAT
droBip1 scf7180000396568:1334814-1335079 - TCGTTCATTTCGTTT-TTGTCTT-CATCCC-GAAAAAGTTGATAGACCTACAA-GTAAGCATCGAA------------------------------------------AAATCT------------AATTATTT-TTGGTTTATTAG-CTAAATAAAATATAAATAA-ATGTTGTATTGCAT--T-------------------------------------------------------CTTGATACTTGCAGTATGATACTTGATTTATTTTT------------TATCTGAAAAGCAA-------------TACGAT-TAAGATTATTTTT--AACTTA-------AATTGCCA---AGTT--------T-CAACACCACGTGTCTCAAAATGGCGACCAT-----------------------TG-GTTGAAATT----AATTTCGTGTTTTTAT
dp5 4_group3:270939-271207 + TCGGCCATTTCGTTT-TTGTCTTTCACCCCTAATACACTTGATAGACCTACAT-GTAAGCTGAATTAAATATAAATTAGCCTAAATTGGCTTAGAGTATGTTC---------------------------------------------------------ACATCAGTGTGCCTGACAGCACAAT-------------------------------------------------------TA------------AATGCGACATGTT--------------CCCCTTTATGTTAAATA-AA-------------AAAGATTTGATGGTATTTT-A-GAGAAAA----AC-ATAACCA---CTCT--------G-GGAAACCACGTGTTTCAAAATGGCGATTCC--AGCCACTCGTGAAA-----AA---------AGTATTTAATT-GTGCGTAAAAT
droPer2 scaffold_1:1745232-1745496 + TCGGCCATTTCGTTT-TTGTCTTTCACCCCTAATACACTTGATAGACCTACAT-GTAAGCTAAATTGAATATAAATTAGCCTA-ATTCGCTTAGAATATGTTC---------------------------------------------------------ACATCAGTGTGCCTGACAGCACAAT-------------------------------------------------------TAG--------CGACATGTT---------------------CCCCTTTATGTTAAATA-AA-------------AAAGATTTTATGGTATTTT-A-GAGTAAA----AC-ATAACCA---CTCT--------G-GGAAACCACGTGTTTCAAAATGGCGATGCC--AGCCACTCGTGAAA-----AA---------AGTATTTAATT-GTGCGTAAAAT
droWil2 scf2_1100000004577:2498631-2498893 - TCGGCCATTTGGTTTTTTGTCTT-TCCCCC--ATACAGTTAATAAACCTACAAAGTAAGAAAAA-------------------------------------------------TAATTTT------AAGA--AA-ATGGTGAAA-----------AAAGTAAATTAA-A---GCGTTTAGATCGATTGTATTCAATTGAGTACTATATTATGTGTACTGCGGA-----------------C----ATATTGAA----------------------------------ACA-TGAATGTTAA-------------AATG-----AGGCTA----ATAAAATAAA----TGAATATTTCGT-------TGGTTGA-CCTAACCACGTGTTTCAAAATGGCGTCGAGAC----ACAAACGAAA-----AA---------AA------------TGTGTTGAT
droVir3 scaffold_12963:14538640-14538907 - TCGTTCATTTGGTTT-TTGTCTT-CACCCC--ATAAAGTTGATACAACTACAA-GTAAGTCGATTTA-ATA-------------------------------------AAGTTA------------AATT--TT--------AATAC-ATACATAAAGTGTAATTAT-TTGAGTATGTTGGTAAT---------------------------------TCGTGCGTTAAAATTAGTCATGCAGT-TTATTGATTTTCACTTG-------------------------TAACTGAAAATCCA-------------ACTG-----AGAATATTA----AATTGA-----------------A------GTATGCA-TTTTACCACGTGTTCCAAAATGGCGGAGGTGCACACGCACCTGAAA-----AA---------GTGAACCAATT-T----TGAAGT
droMoj3 scaffold_6500:17455746-17455997 - TCGTTCATTTGGTTT-TTGTCTT-CACCCC--ATAAAGTTGATACAACTACAA-GTAGGTTAATTTTTAAATTAAATAGTTGAAATATGCTGAG------------------------------------------------------------------------------ACATTTTCATCAATAA----------------------------------------------------TTAA-AACTTACAAAATATACTCTCAT-AATTTAAACTGTTACGTTTTATATGGCATA-AAATGAACTAGAA--AACAAT------------TAA-AAAGT---------ATTGCT--AG------AAGTGCG-CTTTACCACGTGTTTCAAAATGGCGGCAGTGCAAGCGCAT-------------TT-C----------------------TAGAAT
droGri2 scaffold_15252:8235688-8235937 - TCGTTCATTTCGTTT-TTGTCTT-CACCCC--ATACAGTTAAAAATCCTACAA-GTAAGTCTGTTTTTATAATTAAAA---TCAATATGTAGGT---------ATTTAAAATGTAATTTTAAAATAAATT--AT-TTGGGGAAC-----------AACATAAATTGT-A----------------------------------------------------------------------------TCCCTATTGATTGTTTTTGGCA-TG-----------------------------AAAAAAATAGAAA--------------TACTTTTTA-AAATGA-------AA--TTT--GA------GTGTGCA-TTTTACCACGTGTTACAAAATGGCGTCGCTTTACTTGC---------------AT-T----------------------CGGAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGCATTTTG------------------------------------------G-GTTA------------GATT--AT-GTGGGAAAT-AAATTGTGTTTAATTTAATCAACGTGCGCAATAGCACAGG-------------------------------------------------------CAGA-GTTTTGAAATATGCTAAAAGCT-AGCTAAA------------AGTGTAAAAATCCA-------------AGTGAT-GGGATGCATCTTTC-GTAAAAA----TCAATTGCCC---CTTT--------G-GGACACCACGTGTTCCAAAATGGCGACTAT-----------------------AT-G----------------------TAGAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............T-TTGTCTT-CACCCC-AATAAAGTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................25119.0019000000421030000000
........TTCGTTT-TTGTCTT-CACCCC-AATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................28111.001100040031010020000
...........................CCC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................1919.00981000000000000000
.............TT-TTGTCTT-CACCCC-AATAAAGTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2618.00800000031130000000
....................................AGTTGATAGACCTACAA-G....................................................................................................................................................................................................................................................................................................................................................................................................................1817.00740010200000000000
................TTGTCTT-CACCCC-AATAAAGTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2416.00600000040110000000
..........................CCCC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2015.00531100000000000000
........TTCGTTT-TTGTCTT-CACCCC-AATAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2515.00500000001110020000
.....CATTTCGTTT-TTGTCTT-CACCCC-AATA........................................................................................................................................................................................................................................................................................................................................................................................................................................2714.00400000010300000000
............................CC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................1813.00320100000000000000
......................T-CACCCC-AATAAAGTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000000000030000
.........TCGTTT-TTGTCTT-CACCCC-AATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000010010000000
.......TTTCGTTT-TTGTCTT-CACCCC-AATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200010001000000000
.................TGTCTT-CACCCC-AATAAAGTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200000001010000000
............TTT-TTGTCTT-CACCCC-AATAAAGTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000001010000000
....................CTT-CACCCC-AATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020000000000000
............................CC-AATAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................1912.00210100000000000000
.............TT-TTGTCTT-CACCCC-AATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.........................ACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
......................T-CACCCC-AATAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
............TTT-TTGTCTT-CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
....................................................A-GTAAGCATTTTG------------------------------------------G-GTTA------------.............................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
...........................CCC-AATAAAGTTGATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
............................CC-AATAAAGTTGATAGACCTACAA-.....................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001000000000000
....................CTT-CACCCC-AATAAAGTTGAT................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...........GTTT-TTGTCTT-CACCCC-AA..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
....................CTT-CACCCC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
.................TGTCTT-CACCCC-AATAAAGTTGATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
.....................TT-CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
..........CGTTT-TTGTCTT-CACCCC-AATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
....................................AGTTGATAGACCTACAA-GTAA.................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
.........................ACCCC-AATAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
........TTCGTTT-TTGTCTT-CACCCC-AATAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
........................CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
........TTCGTTT-TTGTCTT-CACCCC-AATA........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.....CATTTCGTTT-TTGTCTT-CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
......................................TTGATAGACCTACAA-GTAAGCATTTT..........................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
................................ATAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
......................T-CACCCC-AATAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001000000000000
...........................CCC-AATAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
...............................................................TTG------------------------------------------G-GTTA------------GATT--AT-GTGGGAAAT-AAAT......................................................................................................................................................................................................................................................................................................................2711.00100000000000100000
........................CACCCC-AATAAAGTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
.....................................................................................................................................................................................................................................................................................................AAAATCCA-------------AGTGAT-GGGATGCATC................................................................................................................................2411.00100000100000000000
.......TTTCGTTT-TTGTCTT-CAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................19170.12200000000200000000
droSec2
TCTGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGCATTTTC------------------------------------------G-GTTG------------GGTA--AT-GTGGGAAAT-AAATTGTGCTTAATTTAATCAGCGTGCGCAATAGCACACG-------------------------------------------------------CAGA-GTTTTGAAATATGCTAAAAGCT-ACCTAAA------------AGTGTAAAAATCCA-------------AGTGAT-GGGATGCATCTTTC-GTAAAAA----TCAATTGCCC---CTTT--------G-GGACACCACGTGTTCCAAAATGGCGACTAT-----------------------AT-G----------------------TAGAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................CCC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020020
........TTCGTTT-TTGTCTT-CACCCC-AATAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0022000
..........................CCCC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
............TTT-TTGTCTT-CACCCC-AATAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.......TTTCGTTT-TTGTCTT-CACCCC-A...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.....................TT-CACCCC-AATAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
................................ATAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
........TTCGTTT-TTGTCTT-CACCCC-AATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000
......................T-CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...............................................................................................................................................................................ATAGCACACG-------------------------------------------------------CAGA-GTTT..................................................................................................................................................................................................................1811.0010001
............................CC-AATAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
........TTCGTTT-TTGTCTT-CACCCC-............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..........................................................GCATTTTC------------------------------------------G-GTTG------------GGTA--AT-G...................................................................................................................................................................................................................................................................................................................................2011.0010001
..........................CCCC-AATAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
..........................................................GCATTTTC------------------------------------------G-GTTG------------GGTA--AT-GTGG................................................................................................................................................................................................................................................................................................................................2311.0010100
............................................................ATTTTC------------------------------------------G-GTTG------------GGTA--AT-GTGGGA..............................................................................................................................................................................................................................................................................................................................2311.0010010
.................TGTCTT-CACCCC-AATAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000
..............................................................................................................GTTG------------GGTA--AT-GTGGGAAAT-..........................................................................................................................................................................................................................................................................................................................1911.0010010
....................................AGTTGATAGACCTACAA-GTAAGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
..............T-TTGTCTT-CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.............TT-TTGTCTT-CACCCC-AATA........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
........................CACCCC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.....................................................................................................................................................................................................................................................................................................AAAATCCA-------------AGTGAT-GGGA......................................................................................................................................1811.0010001
....................................AGTTGATAGACCTACAA-GTAAGCATTTT..........................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
..........................CCCC-AATAAAGTTGATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
.................................................................................................................................A--AT-GTGGGAAAT-AAATTGTG..................................................................................................................................................................................................................................................................................................................2011.0010001
dm3
TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGCATTTTC------------------------------------------G-GTTG------------GATT--AT-GTGGGAAAT-AAATGGTGTTTAATTTAATCAGCATGCGCCATACCACAGT-------------------------------------------------------CAGA-GTTTTGATATATGCTAAAAGCT-AGCTAAA------------AGTGTAAAAATCCA-------------AGTGAT-GGGTTGTATCTTTC-GTAAAAA----TCAATTGTCC---CTTTGG------G-GGACACCACGTGTTCCAAAATGGCGACTAT-----------------------AT-G----------------------TAGTAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........TTCGTTT-TTGTCTT-CACCCC-AATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................28151.005100000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001600000000000000000000000000000000000000000000100000000000000000000000000000809027140000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............T-TTGTCTT-CACCCC-AATAAAGTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................25134.00340000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000200050822360000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000
.....CATTTCGTTT-TTGTCTT-CACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................22115.00150000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000010000011000000000000001000000000000000000002001000000000000000000000000000000000000000000000000000000000001100
.....CATTTCGTTT-TTGTCTT-CAC................................................................................................................................................................................................................................................................................................................................................................................................................................................20113.00130000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100003000000000000000000000000000000000000000000000000000000000000000000000000000000020000111000000000000000000000000000000000000001000000000000010000000000000000000000000000000010000000000000000
........TTCGTTT-TTGTCTT-CACCCC-AATAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................27113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000100000000000000000000000100000100310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........TCGTTT-TTGTCTT-CACCCC-AATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................27113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000021410210000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............TT-TTGTCTT-CACCCC-AATAAAGTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................26111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100010102140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGTTGATAGACCTACAA-G....................................................................................................................................................................................................................................................................................................................................................................................................................18111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000001000001010110000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CATTTCGTTT-TTGTCTT-CACCCC-AA..........................................................................................................................................................................................................................................................................................................................................................................................................................................25110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030001010200000000000000000000000000000000000000100000000000000000000000001000000000000000000000000000000000100
.....CATTTCGTTT-TTGTCTT-CACCCC-............................................................................................................................................................................................................................................................................................................................................................................................................................................2319.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011011002000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000
..............T-TTGTCTT-CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2719.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010600010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTT-TTGTCTT-CACCCC-AATAAAGTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031300010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TT-TTGTCTT-CACCCC-AATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
...........................CCC-AATAAAGTTGATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000010000000000000000000000000000000000000000000010000000100000000000000000000000001000001000001000000000000000000000000000000000000000000000000000000000000000
......................T-CACCCC-AATAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2417.0070000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CACCCC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011000030000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTTCGTTT-TTGTCTT-CACCCC-............................................................................................................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTT-TTGTCTT-CACCCC-AATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000001101000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................CCCC-AATAAAGTTGATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................1917.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000002020000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000
................................ATAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000200000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
..........................................................GCATTTTC------------------------------------------G-GTTG------------GATT--A......................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000
.............TT-TTGTCTT-CACCCC-AATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................CATACCACAGT-------------------------------------------------------CAGA-GTT...................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGTTGATAGACCTACAA-GTAAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTGTCTT-CACCCC-AATAAAGTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000
............TTT-TTGTCTT-CACCCC-AATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACCCC-AATAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000101100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTCGTTT-TTGTCTT-CACCCC-AATAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100110000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGTTGATAGACCTACAA-GTAAGCATT............................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TT-CACCCC-AATAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GCCATACCACAGT-------------------------------------------------------CAGA-G.....................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACCCC-AATAAAGTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CATTTCGTTT-TTGTCTT-C..................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......ATTTCGTTT-TTGTCTT-CACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000
........TTCGTTT-TTGTCTT-CACCCC-AATAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATAAAGTTGATAGACCTACA.......................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000200002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CATTTCGTTT-TTGTCTT-CACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000010000000000000000000000
........................CACCCC-AATAAAGTTGATAGACCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TAAAGTTGATAGACCTACAA-GTAAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............T-TTGTCTT-CACCCC-AATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000
....................CTT-CACCCC-AATAAAGTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...........GTTT-TTGTCTT-CACCCC-AATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ACCTACAA-GTAAGCATTT...........................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GCATTTTC------------------------------------------G-GTTG------------GATT--AT-G...................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100
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droEre2
TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGCATTTTC------------------------------------------A-CTTG------------GATA--AA-GTGGGAAAT-AAGTTGTCTTTAATTTAAAAAGCATG-GCCATATCACAGA-------------------------------------------------------CAGA-GTTTTGTAATATGCTAAAAGCT-AGTTTAA------------AGTGTTGAATTCCG-------------AGTGAT-GGAGTGCATTTTTC-GTAAAAA----TCAATTGCCC---CTTT--------G-GTACACCACGTGTTCCAAAATGGCGACGAT-----------------------AT-G----------------------TAGAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
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.....................................................................................................................................................................................................................................................................................................GAATTCCG-------------AGTGAT-GGAGTGCG..................................................................................................................................2211.0010000010
......................T-CACCCC-AATAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
................................................................TC------------------------------------------A-CTTG------------GATA--AA-GTGGG...............................................................................................................................................................................................................................................................................................................................1811.0010100000
.......TTTCGTTT-TTGTCTT-CACCCC-............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.........................ACCCC-AATAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
....................CTT-CACCCC-AATAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
........................CACCCC-AATAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
............................CC-AATAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
........................CACCCC-AATAAAGTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
...........................CCC-AATAAAGTTGATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.........................ACCCC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
....................................AGTTGATAGACCTACAA-G....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
..................GTCTT-CACCCC-AATAAAGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
........TTCGTTT-TTGTCTT-CACCCC-............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
.............TT-TTGTCTT-CACCCC-AATAAAGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
...............................................CTACAA-GTAAGCATTTTC------------------------------------------A-.............................................................................................................................................................................................................................................................................................................................................................1911.0011000000
........TTCGTTT-TTGTCTT-CACCCC-AATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
........................CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
..............T-TTGTCTT-CACCCC-AATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
droYak3
TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGCATTTTT------------------------------------------G-GTTG------------GAAA--AA-GTGTGAAAT-AAATTATCT--ATTTTAACCACTATGCGCCATGTTATAGT-------------------------------------------------------CAGA-GATCTTAAACATTCTTGAATCT-AGTTTAA------------AGTGTTGGAATGTC-------------AGTGAT-TGAGTATTATTTTC-GCAAAAA----TCGATTGCCC---CAAT--------G-GGACACCACGTGTTTCAAAATGGCGACGAT-----------------------AT-C----------------------TAGAATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........TTCGTTT-TTGTCTT-CACCCC-AATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2815.00503200000000
................TTGTCTT-CACCCC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2914.00400000000004
........................CACCCC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2213.00310200000000
...........GTTT-TTGTCTT-CACCCC-AATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00302100000000
........TTCGTTT-TTGTCTT-CACCCC-AATAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00302010000000
..................GTCTT-CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000000000
...........GTTT-TTGTCTT-CACCCC-AAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200101000000
......................T-CACCCC-AATAAAGTTGAT................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00201100000000
...................TCTT-CACCCC-AATAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2712.00202000000000
....................CTT-CACCCC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2512.00210100000000
...........................CCC-AATAAAGTTGATAGACCTACAA-.....................................................................................................................................................................................................................................................................................................................................................................................................................2512.00202000000000
......................T-CACCCC-AATAAAGTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2712.00202000000000
...........GTTT-TTGTCTT-CACCCC-AATAAAGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.......TTTCGTTT-TTGTCTT-CACCCC-AATAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
.....................................GTTGATAGACCTACAA-GTAAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
..........CGTTT-TTGTCTT-CACCCC-AATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
....................CTT-CACCCC-AATAAAGTTGATAGACCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
........TTCGTTT-TTGTCTT-CACCCC-AA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..................GTCTT-CACCCC-AATAAAGTTGATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.......TTTCGTTT-TTGTCTT-CACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
...............................AATAAAGTTGATAGACCTACAA-A....................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
................TTGTCTT-CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.................TGTCTT-CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
......................T-CACCCC-AATAAAGTTGATAGACCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..............T-TTGTCTT-CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
....................CTT-CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
............................CC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
.........................ACCCC-AATAAAGTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
..........................CCCC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
................TTGTCTT-CACCCC-AATAAAGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..................GTCTT-CACCCC-AATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.....................................GTTGATAGACCTACAA-GTAAGCATT............................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
..........................CCCC-AATAAAGTTGATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000
.....................TT-CACCCC-AATAAAGTTGATAG..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.............TT-TTGTCTT-CACCCC-AAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CACCACGTGTTTCAAAATGGCGACG.........................................................2511.00100000010000
........TTCGTTT-TTGTCTT-CACCCC-............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
...........................CCC-AATAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
......................T-CACCCC-AATAAAGTTGATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.........TCGTTT-TTGTCTT-CACCCC-AATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
...........................CCC-AATAAAGTTGATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
........................CACCCC-AATAAAGTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.............................C-AATAAAGTTGATAGACCTACAA-AA...................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..............T-TTGTCTT-CACCCC-AATAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.....................TT-CACCCC-AATAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
......................T-CACCCC-AATAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
............TTT-TTGTCTT-CACCCC-AATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
..............T-TTGTCTT-CACCCC-AATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.................................TAAAGTTGATAGACCTACAA-.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.........TCGTTT-TTGTCTT-CACCCC-AATAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
............................................................ATTTTT------------------------------------------G-GTTG------------GAAA--AA-GT..................................................................................................................................................................................................................................................................................................................................1911.00100100000000
......................................................GTAAGCATTTTT------------------------------------------G-GTTG------------GAAA--AA-GTG.................................................................................................................................................................................................................................................................................................................................2611.00101000000000
........................CACCCC-AATAAAGTTGATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...........................CCC-AATAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000
......................................................................................................................................................................CTATGCGCCATGTTATAGT-------------------------------------------------------C..........................................................................................................................................................................................................................2011.00100000010000
............TTT-TTGTCTT-CACCCC-AATA........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
.........................ACCCC-AATAAAGTTGATAGACCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.............TT-TTGTCTT-CACCCC-AATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
..........CGTTT-TTGTCTT-CACCCC-AATA........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
........................................................................................................................................................................ATGCGCCATGTTATAGT-------------------------------------------------------CAGA-......................................................................................................................................................................................................................2111.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................CACCACGTGTTTCAAAATGGC.............................................................2111.00100100000000
......................T-CACCCC-AATAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.............TT-TTGTCTT-CACCCC-AATAAAGTTGAT................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001
..............T-TTGTCTT-CACCCC-AATAAAGTTGAT................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
droEug1
TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGAATTTTT------------------------------------------A-TATA------------AATG--TT-GTGAGAAAT-AATAGGTTTCTAAAAGAAA-AA-ATGTGCTTTTGCACAGC-------------------------------------------------------TAGT-ATTTTGAAAAATGCAAATAGCT-AATTTAA------------AGTTAAAAAACCAA-------------AGTGAT-TAAACGTATTTTCT-TAAAATA----TAAATTTTTC---CACT--------G-GGACACCACGTGTCTTAAAATGGCGACCAA-----------------------A--------------------------AGAACSizeHit CountTotal NormTotal
No Reads
droBia1
TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGAATTTAT------------------------------------------TGATTG------------GATT--TT-GGGGGAAAT-AATTAGTGACAAAGTACACTAA-ATGTGCTTCTTCATGGC-------------------------------------------------------CAGT-GAACTAAAAAATGTTATGAACT-AATTTAA------------AGGGTCAAATTCAA-------------AACGAT-GGACCTTCTTTCGT-ATAAAAA----TCAATTTTTC---CCTT--------T-GGACACCACGTGTTTCAAAATGGCGACGGA-----------TAGAAAATG---CC-G----------------------TGGAATSizeHit CountTotal NormTotal
No Reads
droTak1
TCTGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGTTTTTTA------------------------------------------AACTTA------------ATTT--TT-GTGGGAAAT-AAATGGTTTAAAAGTAGAGTAG-TTGTGCTTTTACATAGC-------------------------------------------------------CTGA-GTTATGAAAATTGTTATTGGCT-AATTTAA------------AGTTGAAATTTCTA-------------AACGAT-GGGGGTTTTTTATA-ATACGAA----TTGATTTGCC---CCTT--------G-GGACACCACGTGTTTCAAAATGGCGACGGA-----------TGAAAAATGC--TT-G----------------------CGGAATSizeHit CountTotal NormTotal
No Reads
droEle1
TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGATTTTGC------------------------------------------GAGTGT------------AATT--TT-AAGGGAATT-AATTGGTGTAAAAGTGAAGTAA-ATATGCTGTTGCACAGC-------------------------------------------------------CTGA-GCCCTCCGAAATGTTATTACCT-TATTTAA------------AGATGGAAATTAAA-------------CGTGAT-GGAGTGTATTTT-C-AAAAAAA----TCAATTCTTG---CTCT--------GTGGGCACCACGTGTTCCAAAATGGCGACGGG-----------AGTACA---------------AG-------TTTTAAAGGCGAATSizeHit CountTotal NormTotal
No Reads
droRho1
TCGGCCATTTCGTTT-TTGTCTT-CACCCC-AATAAAGTTGATAGACCTACAA-GTAAGATTTTGC------------------------------------------GAGTGT------------AATT--TT-ATGGGAATT-AATTGGTGTAGCAGTGAATTAA-ATGTGCTTTTGGACAGT-------------------------------------------------------CTGT-GTTTTGCAAAATGTTATTTGCT-AATTTAA------------TGTGGGAAATTAAA-------------CGTGAT-GGAGCGTATTTT-C-AAGAAAA----TCAATATTTC---CCTT--------G-GAGCACCACGTGTTTCAAAATGGCGACGCT-----------AGTGAA------AT-A----------------------TGGAATSizeHit CountTotal NormTotal
No Reads
droFic1
TCGGCCATTTCGTTT-TTCTCTC-CGACCG-AATAAAGTTGATAGACCTACAA-GTAAGAATTTTT------------------------------------------GGGTTA------------AATA--GT-GTGGGAAAT-AGTTAATAAAATAATGAAATCA-ATTTTATAGTGCATAGC-------------------------------------------------------CATT-GCATTCGCAAATGAAA--------------------------AC-TTAAAAATTAA---AATGAATATTCTTAAT-AAAGCGTATTTA-C-AACACAA----TCAATTTTTC---GCCT--------T-GGTCACCACGTGTTTTAAAATGGCGACTGC-----------TGAAA-------------------------------------AASizeHit CountTotal NormTotal
No Reads
droKik1
TCGTCCATTTCGTTT-TCGTCTT-CTCCCC-AATAAAGTTGATAGACCTACAA-GTAAGATTTTCA------------------------------------------ATGTTT------------AATT--TTGGTGTGAAAT-AGACCATTTAAGAGAATATTAACTAGTGC-TCAGCAAAGC-------------------------------------------------------CATG-AATTTGAAGAACGTTAATAGCC-TAATTTC------------AATGAGAAATGCCT-------------CGAGAT-CAAGTATATTTTTA--AGAGAATGTGTAGCTTGACC--CAAGT-G------G-TGTCACCACGTGTTTCAAAATGGCGACAGC-----------TGAGAA---------------AA-------TATGTGAATCGAATSizeHit CountTotal NormTotal
No Reads
droAna3
TCGTTCATTTCGTTT-TTGTCTT-CATCCC-GAAAAAGTTGATAGACCTACAA-GTAAGCATCTGA------------------------------------------AAATTG------------AATT-TAT-TTGGCCTACTAC-CCAAATAAAATATAAATAA-ATGGCTTATTGCAT--T-------------------------------------------------------CTTGATACTTGCAGTTTGGTATTTGATTTATTTTT------------TATTTGAAAAACAA-------------AACGAT-TAAGCTTATTTTTA-AACTAA-------AACTGCCA---AGCT--------G-AAGCACCACGTGTCTCAAAATGGCGACCAT-----------------------TTTATTGAAATTA-----TTTTTTGTTCTCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................ATCCC-GAAAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................21110.0010090010
........................CATCCC-GAAAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2216.006060000
..............T-TTGTCTT-CATCCC-GAAAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2315.005040010
................TTGTCTT-CATCCC-GAAAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2214.004040000
.........................ATCCC-GAAAAAGTTGATAGACCTACAA-.....................................................................................................................................................................................................................................................................................................................................................................................................................2713.003030000
........................CATCCC-GAAAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2312.002020000
.........................ATCCC-GAAAAAGTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2512.002020000
..........................TCCC-GAAAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
..............T-TTGTCTT-CATCCC-GAAAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2712.002020000
..........CGTTT-TTGTCTT-CATCCC-GAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002110000
..........................TCCC-GAAAAAGTTGATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
.........................ATCCC-GAAAAAGTTGATAGACCTACAA-A....................................................................................................................................................................................................................................................................................................................................................................................................................2812.002002000
........................CATCCC-GAAAAAGTTGAT................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002020000
......................T-CATCCC-GAAAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2312.002020000
...........GTTT-TTGTCTT-CATCCC-GAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002020000
.........................ATCCC-GAAAAAGTTGATAGACCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2312.002020000
....................CTT-CATCCC-GAAAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2512.002020000
..................GTCTT-CATCCC-GAAAAAGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
..................GTCTT-CATCCC-GAAAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
.........................ATCCC-GAAAAAGTTGATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
..........................TCCC-GAAAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.........TCGTTT-TTGTCTT-CATCCC-GAAAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
..............................................................................................................ATTG------------AATT-TAT-TTGGCCTACTAC-CCAAAT.................................................................................................................................................................................................................................................................................................................2911.001010000
...................TCTT-CATCCC-GAAAAAGTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
...................................................................................................................................................................................CAT--T-------------------------------------------------------CTTGATACTTGCAGTTTGGTAT.....................................................................................................................................................................................................2611.001010000
....................................AGTTGATAGACCTACAA-GTAAGCATCT...........................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................TTGTCTT-CATCCC-GAAAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..........CGTTT-TTGTCTT-CATCCC-............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.........................ATCCC-GAAAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
........TTCGTTT-TTGTCTT-CATCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
........TTCGTTT-TTGTCTT-CATCCC-GAAAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
...........GTTT-TTGTCTT-CATCCC-GAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.............TT-TTGTCTT-CATCCC-GAAAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...........................CCC-GAAAAAGTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
........TTCGTTT-TTGTCTT-CATCCC-GAAAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
.................TGTCTT-CATCCC-GAAAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........GTTT-TTGTCTT-CATCCC-GAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.......TTTCGTTT-TTGTCTT-CATCCC-GAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
........TTCGTTT-TTGTCTT-CATCCC-GA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
..................GTCTT-CATCCC-GAAAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000
...............................GAAAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...........................CCC-GAAAAAGTTGATAGACCTACAA-.....................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........TTCGTTT-TTGTCTT-CATCCC-GAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
................TTGTCTT-CATCCC-GAAAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
........................CATCCC-GAAAAAGTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
........TTCGTTT-TTGTCTT-CATCCC-GAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.............TT-TTGTCTT-CATCCC-GAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................GCACCACGTGTCTCAAAATGGC.............................................................2211.001010000
.............TT-TTGTCTT-CATCCC-GAAAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...........GTTT-TTGTCTT-CATCCC-GA..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..............T-TTGTCTT-CATCCC-GAAAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..............T-TTGTCTT-CATCCC-GAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..............T-TTGTCTT-CATCCC-GAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droBip1
TCGTTCATTTCGTTT-TTGTCTT-CATCCC-GAAAAAGTTGATAGACCTACAA-GTAAGCATCGAA------------------------------------------AAATCT------------AATTATTT-TTGGTTTATTAG-CTAAATAAAATATAAATAA-ATGTTGTATTGCAT--T-------------------------------------------------------CTTGATACTTGCAGTATGATACTTGATTTATTTTT------------TATCTGAAAAGCAA-------------TACGAT-TAAGATTATTTTT--AACTTA-------AATTGCCA---AGTT--------T-CAACACCACGTGTCTCAAAATGGCGACCAT-----------------------TG-GTTGAAATT----AATTTCGTGTTTTTATSizeHit CountTotal NormTotal
No Reads
dp5
TCGGCCATTTCGTTT-TTGTCTTTCACCCCTAATACACTTGATAGACCTACAT-GTAAGCTGAATTAAATATAAATTAGCCTAAATTGGCTTAGAGTATGTTC---------------------------------------------------------ACATCAGTGTGCCTGACAGCACAAT-------------------------------------------------------TA------------AATGCGACATGTT--------------CCCCTTTATGTTAAATA-AA-------------AAAGATTTGATGGTATTTT-A-GAGAAAA----AC-ATAACCA---CTCT--------G-GGAAACCACGTGTTTCAAAATGGCGATTCC--AGCCACTCGTGAAA-----AA---------AGTATTTAATT-GTGCGTAAAATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................TCACCCCTAATACACTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2523.5070610000000
......................................TTGATAGACCTACAT-GTAAGCTGAAT..........................................................................................................................................................................................................................................................................................................................................................................................................2612.0020200000000
.......................................TGATAGACCTACAT-GTAAGCTGAAT..........................................................................................................................................................................................................................................................................................................................................................................................................2512.0020200000000
......................TTCACCCCTAATACACTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2621.5030300000000
......................................................................................................C---------------------------------------------------------ACATCAGTGTGCCTGACAGCACA....................................................................................................................................................................................................................................................................................2411.0010010000000
TCGGCCATTTCGTTT-TTGTCTTTCACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
................................ATACACTTGATAGACCTACAT-GTA..................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...................................................................................AATTGGCTTAGAGTATGTTC---------------------------------------------------------AC.........................................................................................................................................................................................................................................................................................................2211.0010000100000
....................................................................................ATTGGCTTAGAGTATGTTC---------------------------------------------------------ACAT.......................................................................................................................................................................................................................................................................................................2311.0010000001000
....................................ACTTGATAGACCTACAT-GTAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
.....................................CTTGATAGACCTACAT-GTAA.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................GAAAA----AC-ATAACCA---CTCT--------G-GGA..................................................................................2211.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................AA----AC-ATAACCA---CTCT--------G-GGAAACCACG...........................................................................2611.0010100000000
........TTCGTTT-TTGTCTTTCACCCCTAATA........................................................................................................................................................................................................................................................................................................................................................................................................................................2621.0020100000100
..................................................CAT-GTAAGCTGAATTAAATA....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................TTAGAGTATGTTC---------------------------------------------------------ACATCAGTGT.................................................................................................................................................................................................................................................................................................2311.0010010000000
.............................................................................................GAGTATGTTC---------------------------------------------------------ACATCAGTGT.................................................................................................................................................................................................................................................................................................2011.0010000100000
.........TCGTTT-TTGTCTTTCACCCCTAATA........................................................................................................................................................................................................................................................................................................................................................................................................................................2521.0020200000000
........................CACCCCTAATACACTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2721.0020110000000
......................................................................................................................................................................................AAT-------------------------------------------------------TA------------AATGCGACATGTT--------------CCC...............................................................................................................................................................................2111.0010010000000
........................CACCCCTAATACACTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2421.0020110000000
................................ATACACTTGATAGACCTACAT-G....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
...................TCTTTCACCCCTAATACACTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2920.5010100000000
.........TCGTTT-TTGTCTTTCACCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
....................CTTTCACCCCTAATACACTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
....................CTTTCACCCCTAATACACTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
......................TTCACCCCTAATACACTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010100000000
.......................TCACCCCTAATACACTTGATAGACCTACA.......................................................................................................................................................................................................................................................................................................................................................................................................................2920.5010100000000
........TTCGTTT-TTGTCTTTCACCCCTAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010010000000
.................TGTCTTTCACCCCTAATACACTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010100000000
........TTCGTTT-TTGTCTTTCACCCCTAATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010100000000
.........TCGTTT-TTGTCTTTCACCCCTAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010100000000
........................CACCCCTAATACACTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000100000
.......TTTCGTTT-TTGTCTTTCACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
.............TT-TTGTCTTTCACCCCTAATACACC....................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010010000000
.........TCGTTT-TTGTCTTTCACCCCTAATAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010100000000
........................CACCCCTAATACACTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010010000000
.......................TCACCCCTAATACACTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010100000000
.......................TCACCCCTAATACACTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2820.5010100000000
........................CACCCCTAATACACTTGATAGACCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010010000000
.............................CTAATACACTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310010000000
................................ATACACTTGATAGACCTACA.......................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310100000000
...........................CCCTAATACACTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310010000000
...........................CCCTAATACACTTGATAGACCTACAT-.....................................................................................................................................................................................................................................................................................................................................................................................................................2630.3310100000000
.........................ACCCCTAATACACTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310010000000
...............................AATACACTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310010000000
.............................CTAATACACTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310010000000
..............................TAATACACTTGATAGACCTACA.......................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310100000000
droPer2
TCGGCCATTTCGTTT-TTGTCTTTCACCCCTAATACACTTGATAGACCTACAT-GTAAGCTAAATTGAATATAAATTAGCCTA-ATTCGCTTAGAATATGTTC---------------------------------------------------------ACATCAGTGTGCCTGACAGCACAAT-------------------------------------------------------TAG--------CGACATGTT---------------------CCCCTTTATGTTAAATA-AA-------------AAAGATTTTATGGTATTTT-A-GAGTAAA----AC-ATAACCA---CTCT--------G-GGAAACCACGTGTTTCAAAATGGCGATGCC--AGCCACTCGTGAAA-----AA---------AGTATTTAATT-GTGCGTAAAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................GTAAA----AC-ATAACCA---CTCT--------G-.....................................................................................1913.003300000
........................CACCCCTAATACACTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2722.505500000
.............................CTAATACACTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2222.505500000
..................................................................................................................................................................................................................................................................................................................................................GTAAA----AC-ATAACCA---CTCT--------G-GGAA.................................................................................2312.002200000
........................CACCCCTAATACACTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................2322.004400000
........................CACCCCTAATACACTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2021.503003000
.......................TCACCCCTAATACACTTGATAGACCTACA.......................................................................................................................................................................................................................................................................................................................................................................................................................2921.503030000
............................CCTAATACACTTGATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................1921.002200000
...................TCTTTCACCCCTAATACACTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2921.002020000
.......................TCACCCCTAATACACTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2521.002020000
....................................ACTTGATAGACCTACAT-G....................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.............TT-TTGTCTTTCACCCCTAATACACTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2820.501010000
................TTGTCTTTCACCCCTAATACACTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2820.501010000
..........CGTTT-TTGTCTTTCACCCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501001000
......................TTCACCCCTAATACACTTGATAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2620.501010000
........................CACCCCTAATACACTTGATAGACCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2520.501100000
........TTCGTTT-TTGTCTTTCACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501001000
...............................AATACACTTGATAGACCT..........................................................................................................................................................................................................................................................................................................................................................................................................................1820.501100000
.......................TCACCCCTAATACACTTGAT................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501001000
.............TT-TTGTCTTTCACCCCTAATACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501001000
.......................TCACCCCTAATACACTTGATAGACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2720.501010000
........TTCGTTT-TTGTCTTTCACCCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501100000
....................CTTTCACCCCTAATACACTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501001000
................................ATACACTTGATAGACCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................1930.331010000
droWil2
TCGGCCATTTGGTTTTTTGTCTT-TCCCCC--ATACAGTTAATAAACCTACAAAGTAAGAAAAA-------------------------------------------------TAATTTT------AAGA--AA-ATGGTGAAA-----------AAAGTAAATTAA-A---GCGTTTAGATCGATTGTATTCAATTGAGTACTATATTATGTGTACTGCGGA-----------------C----ATATTGAA----------------------------------ACA-TGAATGTTAA-------------AATG-----AGGCTA----ATAAAATAAA----TGAATATTTCGT-------TGGTTGA-CCTAACCACGTGTTTCAAAATGGCGTCGAGAC----ACAAACGAAA-----AA---------AA------------TGTGTTGATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................TAAATTAA-A---GCGTTTAGA......................................................................................................................................................................................................................................................................................1812.00220000
.................TGTCTT-TCCCCC--ATACAGTTAATAAACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2832.00606000
.........TGGTTTTTTGTCTT-TCCCCC--ATACAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2731.67504010
...............................................................................................................................................A-----------AAAGTAAATTAA-A---GCGTTTA........................................................................................................................................................................................................................................................................................2111.00100010
..................................................................................................................................................................................................................................................................................................................................................ATAAA----TGAATATTTCGT-------TGGTTGA-CCC..................................................................................2711.00110000
............................................................................................................................................................................................................ATATTATGTGTACTGCGGA-----------------C----AT....................................................................................................................................................................................................................2211.00100010
..........................................................................................................................................GTGAAA-----------AAAGTAAATTAA-A---G..............................................................................................................................................................................................................................................................................................2011.00100010
..............................................................................................................................................................................GTTTAGATCGATTGTATT...........................................................................................................................................................................................................................................................................1811.00100010
..................................................................................................................................................................ATTAA-A---GCGTTTAGATCGATTGTATT...........................................................................................................................................................................................................................................................................2611.00100010
.......................................................................................................................................................................................GATTGTATTCAATTGAGTA.................................................................................................................................................................................................................................................................1911.00100010
..........................................................................................................................................................................................................................GCGGA-----------------C----ATATTGAA----------------------------------ACA-TGAA....................................................................................................................................................................2111.00101000
..............TTTTGTCTT-TCCCCC--ATACAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2231.00301020
...................................................................................................................................................................................................................................................................................................TGAATGTTAA-------------AATG-----AGGC....................................................................................................................................1811.00100010
..................GTCTT-TCCCCC--ATACAGTTAATAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................2631.00301020
.........................................................................................................................................................................................................ACTATATTATGTGTACTGCGGA-----------------C----A.....................................................................................................................................................................................................................2411.00100010
.................................................................................................................................A--AA-ATGGTGAAA-----------AAAGTA..........................................................................................................................................................................................................................................................................................................1811.00100010
..............TTTTGTCTT-TCCCCC--ATACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2030.67201010
.........TGGTTTTTTGTCTT-TCCCCC--ATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2630.67202000
........TTGGTTTTTTGTCTT-TCCCCC--ATACAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2830.67202000
....................CTT-TCCCCC--ATACAGTTAATAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................2430.67201010
..................GTCTT-TCCCCC--ATACAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................1830.67200020
......................................................................................................................................................................................................................................................................................................................................................A----TGAATATTTCGT-------TGGTT........................................................................................1820.50100010
....................................................................................................................................AA-ATGGTGAAA-----------AAAGTAAA........................................................................................................................................................................................................................................................................................................1920.50100010
.............TTTTTGTCTT-TCCCCC--ATACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2130.33100010
....................CTT-TCCCCC--ATACAGTTAATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2130.33100010
.......TTTGGTTTTTTGTCTT-TCCCCC--ATACAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2930.33100010
.................TGTCTT-TCCCCC--ATACAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33101000
..................GTCTT-TCCCCC--ATACAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33100010
.....CATTTGGTTTTTTGTCTT-TCCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2330.33100010
.............TTTTTGTCTT-TCCCCC--ATACAGTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33100010
...............TTTGTCTT-TCCCCC--ATACAGTTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33101000
.......TTTGGTTTTTTGTCTT-TCCCCC--...........................................................................................................................................................................................................................................................................................................................................................................................................................................2230.33100100
................TTGTCTT-TCCCCC--ATACAGTTAATAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................2830.33101000
..................GTCTT-TCCCCC--ATACAGTTAAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................2330.33101000
.....CATTTGGTTTTTTGTCTT-TCC................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.33100010
.........TGGTTTTTTGTCTT-TCCCCC--ATACAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2830.33101000
......................T-TCCCCC--ATACAGTTAATAAACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2330.33101000
.......TTTGGTTTTTTGTCTT-TCCCCC--ATACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2730.33100010
.................TGTCTT-TCCCCC--ATACAGTTAATAAACCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2930.33101000
.......TTTGGTTTTTTGTCTT-TCCCCC--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................2330.33100001
.............TTTTTGTCTT-TCCCCC--ATACAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2330.33101000
...............TTTGTCTT-TCCCCC--ATACAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2130.33101000
..................GTCTT-TCCCCC--ATACAGTTAATAAACCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2930.33100010
...............TTTGTCTT-TCCCCC--ATACAGTTAATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................2730.33100010
...........GTTTTTTGTCTT-TCCCCC--ATACAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33100010
........TTGGTTTTTTGTCTT-TCCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2030.33100010
..............TTTTGTCTT-TCCCCC--ATACAGTTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33101000
...............TTTGTCTT-TCCCCC--ATACAGTTAATAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................2930.33101000
....................CTT-TCCCCC--ATACAGTTAATAAACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2530.33101000
..................GTCTT-TCCCCC--ATACAGTTAATAAACC...........................................................................................................................................................................................................................................................................................................................................................................................................................2730.33101000
.........TGGTTTTTTGTCTT-TCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................1830.33100010
................................ATACAGTTAATAAACCTACAA......................................................................................................................................................................................................................................................................................................................................................................................................................2130.33100010
droVir3
TCGTTCATTTGGTTT-TTGTCTT-CACCCC--ATAAAGTTGATACAACTACAA-GTAAGTCGATTTA-ATA-------------------------------------AAGTTA------------AATT--TT--------AATAC-ATACATAAAGTGTAATTAT-TTGAGTATGTTGGTAAT---------------------------------TCGTGCGTTAAAATTAGTCATGCAGT-TTATTGATTTTCACTTG-------------------------TAACTGAAAATCCA-------------ACTG-----AGAATATTA----AATTGA-----------------A------GTATGCA-TTTTACCACGTGTTCCAAAATGGCGGAGGTGCACACGCACCTGAAA-----AA---------GTGAACCAATT-T----TGAAGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................TG-----AGAATATTA----AATTGA-----------------A------GTAT.........................................................................................2216.006000000000000000000000100000110000001020000000000000000000000000
......................................................GTAAGTCGATTTA-ATA-------------------------------------AAGTTA------------AATT--T......................................................................................................................................................................................................................................................................................................................................2715.005000000000000000000000000001000010002010000000000000000000000000
.............................................AACTACAA-GTAAGTCGAT...........................................................................................................................................................................................................................................................................................................................................................................................................1813.003000000100100000000000000010000000000000000000000000000000000000
.............TT-TTGTCTT-CACCCC--ATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003001100000000000000000000000000000000000000000000000000000000010
.........TGGTTT-TTGTCTT-CACCCC--AT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003001000000000000000000000000000000000000000000000000000000000002
........................CACCCC--ATAAAGTTGATACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000200000000000000000000000000000000000000000000000000000000000
........................CACCCC--ATAAAGTTGATACA.............................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000100100000000000000000000000000000000000000000000
.............TT-TTGTCTT-CACCCC--ATAAAGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002001000000000000000100000000000000000000000000000000000000000000
..............T-TTGTCTT-CACCCC--ATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2612.002001100000000000000000000000000000000000000000000000000000000000
..............T-TTGTCTT-CACCCC--ATAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002002000000000000000000000000000000000000000000000000000000000000
..................GTCTT-CACCCC--ATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2312.002001000000000000000000000000000000000000000000000000000000001000
.............TT-TTGTCTT-CACCCC--ATAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000100000000000000000000010000000000000000000000000
..............T-TTGTCTT-CACCCC--ATAAAGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
.................TGTCTT-CACCCC--ATAAAGTTGATACAACT..........................................................................................................................................................................................................................................................................................................................................................................................................................2912.002000200000000000000000000000000000000000000000000000000000000000
.............TT-TTGTCTT-CACCCC--ATAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
.................TGTCTT-CACCCC--ATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002001000000000000000000000000000000000000000000000000000000001000
..................GTCTT-CACCCC--ATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002001000000000001000000000000000000000000000000000000000000000000
.................................TAAAGTTGATACAACTACAA-GTAAGTC..............................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
.....CATTTGGTTT-TTGTCTT-C..................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
...........GTTT-TTGTCTT-CACCCC--ATAAAGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
..................GTCTT-CACCCC--ATAAAGTTGATAC..............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
........TTGGTTT-TTGTCTT-CACCCC--AT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000001
........................................GATACAACTACAA-GTAAGTCGATTTA-.......................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
.............TT-TTGTCTT-CACCCC--ATAAAGTTGATAC..............................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
..............T-TTGTCTT-CACCCC--ATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.................TGTCTT-CACCCC--ATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
........................................................AAGTCGATTTA-ATA-------------------------------------AAGTT..........................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................CCCC--ATAAAGTTGATACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
................................ATAAAGTTGATACAACTACAA-GTAAGTCGATT..........................................................................................................................................................................................................................................................................................................................................................................................................3211.001000000000000000000000000000000000000000000000000000000000010000
.................TGTCTT-CACCCC--ATAAAGTTGATACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
................TTGTCTT-CACCCC--ATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
.............................................AACTACAA-GTAAGTCGATTT.........................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
..........GGTTT-TTGTCTT-CACCCC--ATAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
......ATTTGGTTT-TTGTCTT-CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000100000000000000000000000000000000000
......................T-CACCCC--ATAAAGTTGATAC..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CAAAATGGCGGAGGTGCACACG................................................2211.001100000000000000000000000000000000000000000000000000000000000000
..............................................ACTACAA-GTAAGTCGATTTA-ATA-------------------------------------A..............................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000010000000000000000000000000000000000000
..........GGTTT-TTGTCTT-CACCCC--AT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
.......TTTGGTTT-TTGTCTT-CACCCC--...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAAATGGCGGAGGTGCA....................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.......TTTGGTTT-TTGTCTT-CACCCC--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000001000000000000000000000000000000000000000
..........................................TACAACTACAA-GTAAGTCG.............................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000001000000000000000000000000000000000000
.....................TT-CACCCC--ATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.........................ACCCC--ATAAAGTTGATACAACTAC........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.....CATTTGGTTT-TTGTCTT-CACCCC--ATA........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
.............TT-TTGTCTT-CACCCC--ATAAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................CACGTGTTCCAAAATGGCGGA..........................................................2111.001000000000000000000000000000000000000000000000000000000000000010
......ATTTGGTTT-TTGTCTT-CACCCC--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000010000000000000000000000000000000000000
........................CACCCC--ATAAAGTTGATACAA............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............TTT-TTGTCTT-CACCCC--ATAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000001000000000000000000000000
..........GGTTT-TTGTCTT-CACCCC--ATAAAGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................CCCC--ATAAAGTTGATACAACTACAA-G....................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
..........................CCCC--ATAAAGTTGATACAACTACAA-GTA..................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000010000
....................CTT-CACCCC--ATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000010000000000000000000000000
.............TT-TTGTCTT-CACCCC--ATAAAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
................TTGTCTT-CACCCC--ATAAAGTTGATA...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
.........................ACCCC--ATAAAGTTGATACAACTACAA-G....................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.................TGTCTT-CACCCC--ATAAAGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........GGTTT-TTGTCTT-CACCCC--...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..............................................ACTACAA-GTAAGTCGATTTA-.......................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
.........................ACCCC--ATAAAGTTGATACAA............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....CATTTGGTTT-TTGTCTT-CAC................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000001000000000000000000000000000000000000
............TTT-TTGTCTT-CACCCC--ATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
..................GTCTT-CACCCC--ATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
TCGTTCATTTGGTTT-TTGTCTT-CACCCC--ATAAAGTTGATACAACTACAA-GTAGGTTAATTTTTAAATTAAATAGTTGAAATATGCTGAG------------------------------------------------------------------------------ACATTTTCATCAATAA----------------------------------------------------TTAA-AACTTACAAAATATACTCTCAT-AATTTAAACTGTTACGTTTTATATGGCATA-AAATGAACTAGAA--AACAAT------------TAA-AAAGT---------ATTGCT--AG------AAGTGCG-CTTTACCACGTGTTTCAAAATGGCGGCAGTGCAAGCGCAT-------------TT-C----------------------TAGAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................TGTCTT-CACCCC--ATAAAGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
................TTGTCTT-CACCCC--ATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.......TTTGGTTT-TTGTCTT-CACCCC--ATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000
.......TTTGGTTT-TTGTCTT-CACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........GTTT-TTGTCTT-CACCCC--AT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..........................CCCC--ATAAAGTTGATACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
............................CC--ATAAAGTTGATACAACTACAA-GC...................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
........TTGGTTT-TTGTCTT-CACCCC--ATAAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.................................................................................................................................................................................................................................................................ATACTCTCAT-AATTTAAACTGTT..................................................................................................................................................................................2311.001000010
........TTGGTTT-TTGTCTT-CACCCC--...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................CCC--ATAAAGTTGATACAACT..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
............TTT-TTGTCTT-CACCCC--ATAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.........TGGTTT-TTGTCTT-CACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
..................GTCTT-CACCCC--ATAAAGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.................TGTCTT-CACCCC--ATAAAGTTGATAC..............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....CATTTGGTTT-TTGTCTT-CAC................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................AATGGCGGCAGTGCAAGCGCAT-------------................................2211.001100000
......ATTTGGTTT-TTGTCTT-CACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
....................CTT-CACCCC--ATAAAGTTGATACAACT..........................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.......TTTGGTTT-TTGTCTT-CACCCC--...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
TCGTTCATTTCGTTT-TTGTCTT-CACCCC--ATACAGTTAAAAATCCTACAA-GTAAGTCTGTTTTTATAATTAAAA---TCAATATGTAGGT---------ATTTAAAATGTAATTTTAAAATAAATT--AT-TTGGGGAAC-----------AACATAAATTGT-A----------------------------------------------------------------------------TCCCTATTGATTGTTTTTGGCA-TG-----------------------------AAAAAAATAGAAA--------------TACTTTTTA-AAATGA-------AA--TTT--GA------GTGTGCA-TTTTACCACGTGTTACAAAATGGCGTCGCTTTACTTGC---------------AT-T----------------------CGGAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................ACAGTTAAAAATCCTACA.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
.............................C--ATACAGTTAAAAATCCTACA.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
..................GTCTT-CACCCC--ATACAGTTAAAAATCCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110
..............T-TTGTCTT-CACCCC--ATACAGTTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
.......TTTCGTTT-TTGTCTT-CACCCC--ATACA......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
..................GTCTT-CACCCC--ATACAGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
....................................................................................................................................................................................................................................................................................................................................................................................................ACAAAATGGCGTCGCTTTACTTGC---------------A...............................2511.00101

Generated: 05/18/2015 at 11:05 AM