ID:

dsi_17709

 Coordinate:

3r:15053336-15053532 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.5 -38.5 -38.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTGGCGGTCGTTGAGCATGGACGTGGCCATGTATTTCTGTTTGAGTGTGTGTGAGTGTTAGTGTTTGTGTAAGAAGTTCGGCGGCAACGAAAACGTGAAATAGTTAAGCATAAAGGCACAAAGTGAAGAAAATACTCGCACATAAACCCATGTTAGTGTGTTTGTCTAAGCCCTTCTACCTCTTTTTTTGCTACCTGCCAATTTGTTAACTTTATTGTTGCTACCGCTTGCGTGCCGTGAATCAAAGTAACAACAACCGTCACAACAACAACATGCACAAATAAATGTAAGTGTGTA
**************************************************.(((...(((..((...((((((.....(((.((((((((.((........((((((.((....((((...((((((((((..((..((((((.(((....))).))))))..)).................))))))))))...))))....)))))))))).)))))))).))))))))).))..))).)))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 M024
male body		 M025
embryo
 M053
female body
 O002
Head
 SRR902008
ovaries
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
TTGGCGGTCGTTGAGCATGGACG.................................................................................................................................................................................................................................................................................. 23 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0
..........TTGAGCATGGACGTGGCC............................................................................................................................................................................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..........TTGAGCATGGACGTGGCCATGTAT....................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
TTGGCGGTCGTTGAGCATGGACGTG................................................................................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..GGCGGTCGTTGAGCATGGACGTGGCCATG.......................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.............AGCATGGACGTGGCCATG.......................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................GTGCCGTGAATCAAAGTAAC.............................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
............GAGCATGGACGTGGCCATG.......................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.............AGCATGGACGTGGCCAT........................................................................................................................................................................................................................................................................... 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........GTTGAGCATGGACGTGGCCATG.......................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
............GAGCGTGGACGTGGCCATG.......................................................................................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................GTAAGAAGTTCGGCGGCAAC................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
TTGGCGGTCGTTGAG.......................................................................................................................................................................................................................................................................................... 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................AACAACAACATGCACAAA................ 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................ACCGTCACAACAACAACATGCACAAATA.............. 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.....................CGTGGCCATGTATTTCTG.................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TACTACCTCTTTTTCTGCTTCCT..................................................................................................... 23 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.....GGTCGTTGAGCATGGACGTGGCCATG.......................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....GGTCGTTGAGCATGGACG.................................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................CAACAACCGTCACAACAAC............................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................GTTTGTGTAAGAAGTTCGGC....................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
......GTCGTTGAGCATGGACGTGGCCA............................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.............AGCATGGACGTGGCC............................................................................................................................................................................................................................................................................. 15 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
...GCGGCCGTTGAGCATG...................................................................................................................................................................................................................................................................................... 16 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................TTAGTGTTTGTGTAAAAAATT........................................................................................................................................................................................................................... 21 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0
..............................................................GTTTGTCGAAGAAGTTCGTC....................................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
...............................TATATCTGTTGGAGTGTCTGT..................................................................................................................................................................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0
.................TGGACGTCGCCAGGTAT....................................................................................................................................................................................................................................................................... 17 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1
.....GGACGTTGATCATGGAAGT................................................................................................................................................................................................................................................................................. 19 3 20 0.15 3 1 0 1 1 0 0 0 0 0 0 0
................TAGGACGTCGCCATGTATT...................................................................................................................................................................................................................................................................... 19 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................................................................GCTTGAGTGCCGTGA......................................................... 15 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0
.........................................TGAGTGTGTGTGAGTG................................................................................................................................................................................................................................................ 16 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
.........................................................TTAGTGTTTGTGTAAAAAA............................................................................................................................................................................................................................. 19 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 1
..........................................................TAGTGTTTGTGTAAA................................................................................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

AACCGCCAGCAACTCGTACCTGCACCGGTACATAAAGACAAACTCACACACACTCACAATCACAAACACATTCTTCAAGCCGCCGTTGCTTTTGCACTTTATCAATTCGTATTTCCGTGTTTCACTTCTTTTATGAGCGTGTATTTGGGTACAATCACACAAACAGATTCGGGAAGATGGAGAAAAAAACGATGGACGGTTAAACAATTGAAATAACAACGATGGCGAACGCACGGCACTTAGTTTCATTGTTGTTGGCAGTGTTGTTGTTGTACGTGTTTATTTACATTCACACAT
**************************************************.(((...(((..((...((((((.....(((.((((((((.((........((((((.((....((((...((((((((((..((..((((((.(((....))).))))))..)).................))))))))))...))))....)))))))))).)))))))).))))))))).))..))).)))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
......................................................................................................................................................................................AAAAAAAGGATGGACGGGTA............................................................................................... 20 2 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................................................................TTAATTGTTGTTGGCA..................................... 16 1 6 0.17 1 0 1 0 0 0
.........................................ACTCACACACACTCACAA.............................................................................................................................................................................................................................................. 18 0 7 0.14 1 0 1 0 0 0
...CGCCAGCTACTCGTA....................................................................................................................................................................................................................................................................................... 15 1 7 0.14 1 0 0 1 0 0
...........................................................................................................................................TGTATTTTGGTACAATAAC........................................................................................................................................... 19 2 9 0.11 1 0 0 0 1 0
....................................................................................................................................ATGCTCGTGTATTTGGG.................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 1
.................................................................................................................................................................................................................................................AGTTTCATTGTCGTT......................................... 15 1 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:15053286-15053582 + dsi_17709 TTGGCGGTCGTTGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------TTTGAGTGTGTGTGA------GT---GTTAGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGAAA-------------------ACGT--GAA---ATAGTTAAGCATAAAGGCA--CAAAGTGAAGAAAATACTCGC-------ACATAAA-CCC--------------------------------------------------------------------------------------------ATG--TTA--------GTGTGTTTGTC--TAAGCCCT-----------------------------------------------------------------------------TC------TACCTC-T-TTTTTTGCTACCT-------GCCAATTTGTTAACTTTATTGTTGCTA--CCGC-T------T-----GCGTGCCGTGAATCAAAGTA----------ACAACAA-CCGTCACAACAACAACATGCACAAATA----------------------------------------------------AATGTAAGTGTGTA
droSec2 scaffold_0:15919042-15919340 + TTGGCGGTCGTTGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------TTTGAGTGTGTGTGA------GT---GTTAGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGAAA-------------------ACGT--GAA---ATAGTGAAGCATTAAGGCA--CAAAGTGAAGAAAATACTCGC-------ACATAAA-CCC--------------------------------------------------------------------------------------------ATG--TTA--------GTGTGTTTGTC--TAAGCCCT-----------------------------------------------------------------------------TC------TACCTCTTTTTTTTTGCTACCT-------GCCAATTTGTTAACTTTATTGTTGCTA--CCGC-T------T-----GCGTGCCGTGAATCAAAGTA----------ACAACAA-CCGTCACAACAACAACATGCTCAAATA----------------------------------------------------AATGTAAGTGTGTA
dm3 chr3R:5995903-5996198 - TTGGCGGTCGTTGAGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------TTTGAGTGTGTGTGA------GT---GTTAGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGAAA-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCA--CAAAGTGAAGAAA-TACTCGC-------ACATAAA-CCG--------------------------------------------------------------------------------------------ATG--TTA--------GTGTGTTTGTC--TAAGCCCT-----------------------------------------------------------------------------TC------TACCTC-T-TTTTTTGCTACCT-------GCCAATTTGTTAACTTTATTGTTGCTA--CCGC-T------T-----GCGTGCCGTGAATCAAAGTA----------ACAACAA-CCGCCACAACAACAACATGCACAAATA----------------------------------------------------AATGTAAGTGTGTA
droEre2 scaffold_4770:15596498-15596802 + ATGGCGGCCGCT-------------------------------------------------------------------------------------------------------------------------------------------CTGTCTTTGTGTCCATGTATTTCAG------TTTGAGTGTGTGTGCATGCGAGT---GTTTGTGCTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGAAG-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCA--TAAAGTGAAGAAAATAGTCGC---ACATACATAAA-CCC--------------------------------------------------------------------------------------------ATG--TTA--------GTGTGTTTGTT--CTAGCCCT-----------------------------------------------------------------------------TC------TACCTC-T-TTTTTTGCTACCT-------GTCAATTTGTAAACTTTATTGTTGTTA--CCGC-T------T-----GCGTGCCGTGAATCAAAGCA----------ACAACAA-CTACCACAACAACAGCATGCACAAATA----------------------------------------------------AGTGTAAGTGTGTA
droYak3 3R:10045459-10045857 - TTGGCGGTCGTTGAGCGCGGAAGTGGCC-AAGGAA------GTGGTACAA---------------AAGGGCA--------CCTAGCCAGATTCGGAAAAGCATA-AGAACGCGATTTCGGTTTTCGTTGAATGGCCGCT------------CTGTCTTTGTGTCCATGTATTTGTG------TTTAAGTGTGTGCGAGTGCGACT---GTTTGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGAAG-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCG--TAAAGTGAAGAAAATACTCGC-------ACATAAA-CCC--------------------------------------------------------------------------------------------ATG--TTA--------GTGTGTTTGCT--CTAGCCCT-----------------------------------------------------------------------------TC------TACCTCTGTTTTTTTGCTACCT-------GCCAATTTGTTAACTTTATTGTTGTTA--CCGC-T------T-----GCGTGCCGTGAATCAAAGTA----------ACAACAA-CCGCCTCAGCAACAACATGCACAAATA----------------------------------------------------AATGTAAGTGTGTA
droEug1 scf7180000405351:26807-27184 + TTGGCGGTCGTTGAGCGCGGAAGTGGCC-GAAAATA-----------CAA----TATTTACGTTTAAGGGCATATATATAG-----AAGAATCGGAAAATCATA-AGAACGCGAT------TTTTGTTGAATGGCCGCCT-----------CTGTCTTT--GTCCATGTATTC------------------------------GT---GTTTGTGTTTGTG-----------------------------TAAGAAGTTTGACGGCA---GCGACG-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCCA----AGAAAAGAAA-TA--------------------CCC-AAAA--------------------------CAACAAC-------GTGTTTGC-------T---------------------------------G--TGC--------TGCCGTTTGT-----AGCCCT-----------------------------------------------------------------------------TA---ACCTACGAT-TTTTTTTTGCTACCT-------GCCAATTTGTTAACTCTATTGTTGTTG--CTGC-T------T-----GCGTGCCGTGAATCAAAGCA----------ATAAAAAGCAACAACAACTACAACATGCACAAATA----------------------------------------------------AATGTAAGT--GTA
droBia1 scf7180000302075:5919486-5919879 - TTGGCGGTCGTTGAGCGCGGAAGTGGCC-AAAACC-----AGTGGG--AA---------------AAGGGCT--------TCTTGCCAGAAACGGAAAACCCTA-AGAACGCGAT------TTTTGTTGAATGGCCGCCG-----------CTGTCT-T--GTCCCTGTAGTTGTG------CCCGC----CTTTGT------CTG-TGATTGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGACG-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCCA----AGTGGAGAGAATACTCGC----TGTACATAAA-CCCCTACCCATACCTGCACCACTAAAAGTATCAACAACAAA-------GT-----------------------------------------------G--CTA--------GT---TTTG------AGCCCT-----------------------------------------------------------------------------C----TGCTACCTT-TTATTTTTGCTACCT-------GCCAATTTGTTAACTTTATTGTTGCTCCGCCGC-T------T-----GCGTGCCGTGGA----AGCA-----AAGCCAA----------------ATCAACAT-------CA----------------------------------------------------AATGTAAGT--GTA
droTak1 scf7180000415396:599981-600314 - GTGGCGGTCGTTGAGCGCGGAAGTGGCC-GAAAATATCAT-------------------------AAGGGCT--------GCTAGCCAGAAACGGAAGAGCATA-AGAACGCGAT------TTTTGTTGAATGGCCGCCT-----------CTGTCTTT--GTCCGTGTATTTGTG------T------------AA------G----AAGTGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGACG-------------------ACGT--AAA---ATAGTGAAACATAAAGGCCA----AGTGAAGAAAATAAACGT-------ACATAAAACCC-AAAA-----------------------CAACAACAA--------------------------------------------------------------------------------------AGCCCT-----------------------------------------------------------------------------TC---TGCTACCTT-TTATTTTTGCTACCT-------GCCAATTTGTTAACTTTATTGTTGTTTCGCCGC-T------T-----GCGTGCCGTAAATCCAAGCA-----------------------------------------AATA----------------------------------------------------GATGTAAGT--GTA
droEle1 scf7180000491080:220244-220624 + TTGGCGGTCGTTGAGCGCGGAAGTGGACCAAAAAA-AA-TAGTAG-------------------------TA--------GAAAACCCAAATCGGGAAATCATA-AGAACGCGAT------TTTTGTTGAATGGCCGCTATATG------------------------GGTGGCTG------TAGCTGTGTCTGTGT------GT---CTTTGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGACG-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCCA----AGTGAAGAAAATACTCGT-------ACATAAAACTC-AAAA-----------------------CAACAACAAC-------GTGCCGGAGTCTCTTT-------------------------------GTG--T----------TTGTGTTTGTT--TTAGCCCT-----------------------------------------------------------------------------TA------GGACTCCC-CTTGCTGCTACCT-------GCGAATTTGTTAACTTTATTGTTGTTACCTTGC-T------T-----GCGTGCCGTGAGTCCAAGCA----------AC----------------AACAACATGTTTGAGTA----------------------------------------------------AATGTAAGT--GTA
droRho1 scf7180000778278:18741-19115 + TTGGCGGTCGTTGAGCGCGGAAGTGGCC-AAAAAA-TC-T-------------------------AAGGGCA--------GAAAACCAAAATCGGGAAATCATA-AGAACGCGAT------TTTTGTTGAATGGCCGCTA----------------------------TATAGTTG------TCTGTGTGTGTGTGT------GT---GTGAATGTTTGTG-----------------------------TAAGAAGTTCGTCGGCA---ACGACG-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCCA----AGTGAAGAAAATATAAGA-------ACATAAAATCC-AAAA-----------------------CAACAACAAC-------GTGCCGGAGTCTCGTT-------------------------------GTG--TGT--------TTGTGTTTGTT--TTAGCCCT-----------------------------------------------------------------------------TC---GTCTACCT-----TGACTGCTACCT-------GCGAATTTGTTAACTTTATTGCTGTTG--CCCC-T------T-----GCGTGCCGTGAATTCAAGCA----------AC----------------AACAACATGTTTGAGTA----------------------------------------------------AATGTAAGT--GTA
droFic1 scf7180000453800:2088283-2088654 - GAGGCGGTCGTTCAGCACGGAAGTGGCC-AAAAAAA---TAGTGG--CAG--------------------AA--------GAAGACTAGTAACGCAGAACCATA-ATAACGCGAT------TTTTGTTGAATGGCCGCT------------CTGT----------------------------------------CT------GT---CTATGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCGACGACGACG-------------------ACGC--GAA---ATAGTGAAGCATAAAGGCCA----AGTGAAGAAAATACTCGT-------ACATGAAACCC-AAAA--------------------------CTACAAC-------GTGCCGGGTTTTCTTTGTGT------G-----------TGTT---GACTG--TGG--------TTGTGTTTGTT-TTTAGCCCT-----------------------------------------------------------------------------TC------TAACTT-TATTTTTCGCTACCT-------GCCAATTTGTTAACTTTATTGTTCTTG--CTGC-T------G-----GCGTGCCGTGAATCCAAGCA----------AC----------------AACAACATGCCGGAATA----------------------------------------------------GACGTAAGT--GTT
droKik1 scf7180000302261:230670-231140 - TTCACAGTCGTTGAGCGCGGAAGTGGCA-AAGGAG-----C------CAA----------------AGGA-----------AAAACCCAC-----------ACAGACAACGCGAT------TTTTGTTGAATGGCCGCT--------------------------------------------------GTGTGTGC------TT---GTTTGTGTTTGTGTTGTTCGGCTAGTGTCTATGTAATCGCGCAAAGAAGTTCGGCGGCA---GCGACT-------------------GTGT--AAA---ATAGTGAAGCATAAAGGCCA----AGCGAAGAAAAC-------------ACATAAA-ACC-AAAA--------------------------CAACAAAGTTCCCCTTATTCT--TCAGAGTGTGT------G-----------TGTTTTCGGCTG--TTATAGTGTTAGTGT-------------TCC--------------------------------------------------TTGTTTATTTCTGTTATATCTTGGCCCTTCCTCGTCTACC------TTTTTGCTACCT-------GTGAATTGGTTAACTTTGTTGTTGCAG--CGGC-T------T-----GCGTGCCGTCATTA-AAGCGAGTTAAAACCAA----------------AACAACATGCTCGAATATTAGTCGGCAAATGTAAGTACCAGCGTGAGTGTGGGTGTAAATGCAAATGTAAGAGTAAGT--GTA
droAna3 scaffold_13340:1063714-1064037 + CAGTCGGTCGTCGAGCAAGGAAGCCAA-----GAG---------------CCAGCTCCTCCGGCG----------------------A-----------------GAGATGCCAT------T-TTCCTGAATGGCCGCCCCACG------------CTA--------------GTG------TCTGT----CTGTGT------GTGTTAAGTGTGAGCGCG-----------------------------AAAGAAGTTCGGCGGCA---AA-------------------------GC--AAA---ACACTGGAGCATAGAGGCCA----AGTGAAGAAACTA-------------CATAAA-GAG----------------------------AGCCGTCGCC-------GTTCTTGCTTCTGTTT-------------------------------CTG--TGA--------GTGTGTGGGT-----AGCCCT-----------------------------------------------------------------------------TC------TACCTC------CGGGCTACCT-------GTGAATCCGTTGGCTCTGCTGTTGTGA--CGCC-T------T-----GCGTGCCGTGGGCTGAAAC-----------------------------AACAACATGCAAAAATA----------------------------------------------------GTGGTA--C--GTA
droBip1 scf7180000396395:750686-751047 - GAGTCGGTCGTCGAGTGCGGAAGCGAA-----AAC---------------TCAGCTCCTCCGGTC----------------------C-----------------GAGGTGCCAT-------TTTCTTGAATGGCCGCCCCACGCTAGAGTCTGT------------------CTG------TCTAT----CTGTGT------GTGTTAAGTGTGAGCGCG-----------------------------AAAGAAGTTCGGCGGCG---AAGA---------------------------AAA---ATAGTGGAGCATAAAGGCCA----AGTGAAGAAACTACATGAAGAAACTACATAAA-GAG----------------------------AGACGACGAC-------GTTCTTGCTTCTGTTT-------------------------------CTG--TGA--------TTGTGTTGGT-----GGCCCT-----------------------------------------------------------------------------TC------TACCTC------CGGGCTACCT-------GTGAATTTGTTAACTCTGTTGTTGTGA--CGCC-T------T-----GCGTGCCGTGGGTTGAGGCA-----------------------------ACAACATGCAAAAATAGTGGTA------------------------------TGTAAACAC-------GATGTAAGT--GTA
dp5 2:7487741-7488127 + TGGGCA-----------------------------------------------------------------------------------------------------------------------------TGGCTG-------------------------------CATTTGTG------TCGG-------------------------TGTGTGTGTG---------------------------G-ACAGAACTTCGGCGGCA---GCGACAAACGAAAACGTCAAAAACAACGTAAAAA---ATAGTGAAGCATAAAAGCAA--AAACTGAAGAAAA---------------------ACCC-AAGA------------------------AGCAACCGC-------GTGCCCG--TCCAAGTGTGT------G-----------T----------GTTTC--AGTGTGT------CTGTGCGT------GTGTCTTCTTGTTGTTATTGTGTTTGTGAATAGTGGGAAGTGTTTTTGTTTTGTTACCTTCTGGCGTACCCTACCCTACCCTACCCTA-------CCCTACCCTACCTGGAAGGGGCTAATGCAGGAATCTGTTCGGTTCTG--CCGC-TTTGCATG-----GCGTGCCGGGAACACCAGC-----------------------------AACAACATGCACAAATAGTAGCAT------------------------TCGCCTGTA------------CATGTAAAT--GTA
droPer2 scaffold_0:1328697-1329088 + TGGGCA-----------------------------------------------------------------------------------------------------------------------------TGGCTG-------------------------------CATTTGTG------TCGG-------------------------TGTGTGTGTG---------------------------G-ACAGAACTTCGGCGGCA---GCGACAAACGAAAACGTCAAAAACAACGTAAAAA---ATAGTGAAGCATAAAAGCAA--AAACTGAAGAAAA---------------------ACCC-AAGA------------------------AGCAACCGC-------GTGCCCG--TCCAAGTGTGT------G-----------TATGTGTGTGTGTTTC--AGTGTGT------CTGTGCGT------GTGTCTTCTTGTTGTTATTGTGTTTGTGAATAGTGGGAAGTGTTTTTGTTTTGTTACCTTCTGGCGTACCCTACCCTA-----CCCTA-------CCCTACCCTACCTGGAAGGGGCTAATGCAGGAATCTGTTCGGTTCTG--CCGC-TTTGCATG-----GCGTGCCGGGAACACCAGC-----------------------------AACAACATGCACAAATAGTAGCAT------------------------TCGCCTGTA------------AATGTAAAT--GTA
droWil2 scf2_1100000004921:885028-885211 - CTGTCGGTCGTTGAGCGCGGAAGTGAGG-GTG-------------------------------------------------------------------------------ATATTTCTGGTGTTGTTGAATGGCTGCCTCGA--------ATG-GCAAGCGCCT----ACATCTA------CATCTC--TGTGTGC------GT--TGTTCGTGTATG-------------------------------TAAGAAGAATATCGGCGGCAACGACGG------------CAAACAACGTA-AAA---ATTGTGAAGCATAAAGGCCA----AGAGAAGCGAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13047:1136418-1136766 + CTGGCA--CGACAAGCATGGCCACATCC-AC------------------------------------------------------------------------------------------------------------------------------------------AGCTACGTTCACGTTCAT----------------GT---GTGTGTGTGGATG-----------------------------AAAGAACAACAGCGGCA---GCAGCG-------ACG---------TC----AAAATAGTAGTGAAGCATAAAGACCAACAAAATAAAGAAGAAATAAG----------------CCC-AAAACTTAACAA---------------TAACAACAG---------------C-------AGCACCAACGCCAGCAAACAATCA--------ACG--TCA--------GCGTCT-TGTT--T-------------TTTTTTTTTTTTCTGTTCTTGAATGCGAGGTGGAGTTGCTGT--TGTTGGCACCTC--------------------GTGTACCT--------------------------GGATCAGTTGA----G------CTG--CCGTATTCGCGTGTTCCGCCGCGCTGTAAATCTCAGTT----------A-------------------CAAAGTGCATCAGTGTTAGTT------------------------------------------------AGCAATT--GTA
droMoj3 scaffold_6540:5165037-5165242 + TGGTCGGTCGTTGAGCGTGGAAGTGCTC-AGAGTG-----C-------GA--------------------GA--------GAGAACGGGCAACGGGCA-----C-AGAGCGCGAT------TTG-TTTGAATGACTGGTACGT--------TTACGTTCGCGTCC----ATTTCTA------TGTGATTGTGTGTGTCTGTGCGCG-TATGTGTGTGTGTG-----------------------------GGTGAAGAATAACAACA---CCGATA-------------------TC----GAA---ATAGTGAAGCACAAAGGCCA----AGCAAAGAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTGGCGGTCGTTGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------TTTGAGTGTGTGTGA------GT---GTTAGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGAAA-------------------ACGT--GAA---ATAGTTAAGCATAAAGGCA--CAAAGTGAAGAAAATACTCGC-------ACATAAA-CCC--------------------------------------------------------------------------------------------ATG--TTA--------GTGTGTTTGTC--TAAGCCCT-----------------------------------------------------------------------------TC------TACCTC-T-TTTTTTGCTACCT-------GCCAATTTGTTAACTTTATTGTTGCTA--CCGC-T------T-----GCGTGCCGTGAATCAAAGTA----------ACAACAA-CCGTCACAACAACAACATGCACAAATA----------------------------------------------------AATGTAAGTGTGTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
TTGGCGGTCGTTGAGCATGGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00303000000000000000
..........TTGAGCATGGACGTGGCC-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
..........TTGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------TAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
TTGGCGGTCGTTGAGCATGGACGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
..GGCGGTCGTTGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000000010000
.............AGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTGAATCAAAGTA----------AC...................................................................................................2011.00100000000000100000
............GAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
.............AGCATGGACGTGGCC-AT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.........GTTGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
............................................................................................................................................................................................................................G-----------------------------TAAGAAGTTCGGCGGCA---AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
TTGGCGGTCGTTGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACATGCACAAA....................................................................1811.00100000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CCGTCACAACAACAACATGCACAAATA----------------------------------------------------..............2811.00100010000000000000
.....................CGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.....GGTCGTTGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.....GGTCGTTGAGCATGGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA-CCGTCACAACAAC................................................................................1911.00100100000000000000
......................................................................................................................................................................................................................GTTTGTG-----------------------------TAAGAAGTTCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000100000000
......GTCGTTGAGCATGGACGTGGCC-A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000010000
.............AGCATGGACGTGGCC-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000000001000000
........................................................................................................................................................................................TGAGTGTGTGTGA------GT---G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.10200000000002000000
..................................................................................................................................................................................................................TAGTGTTTGTG-----------------------------TAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000001000000000
droSec2
TTGGCGGTCGTTGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------TTTGAGTGTGTGTGA------GT---GTTAGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGAAA-------------------ACGT--GAA---ATAGTGAAGCATTAAGGCA--CAAAGTGAAGAAAATACTCGC-------ACATAAA-CCC--------------------------------------------------------------------------------------------ATG--TTA--------GTGTGTTTGTC--TAAGCCCT-----------------------------------------------------------------------------TC------TACCTCTTTTTTTTTGCTACCT-------GCCAATTTGTTAACTTTATTGTTGCTA--CCGC-T------T-----GCGTGCCGTGAATCAAAGTA----------ACAACAA-CCGTCACAACAACAACATGCTCAAATA----------------------------------------------------AATGTAAGTGTGTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....CGGTCGTTGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0031020
......GTCGTTGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020011
...........TGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020002
TTGGCGGTCGTTGAGCATGGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020002
................................................................................................................................................................................................................................................................................GAAA-------------------ACGT--GAA---ATAGTGAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
....CGGTCGTTGAGCATGGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
......GTCGTTGAGCATGGACGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
.....................................................................................................................................................................................................................................................................................................................................................ATACTCGC-------ACATAAA-CCC--------------------------------------------------------------------------------------------ATG--TTA--------GTGT.....................................................................................................................................................................................................................................................................................................................2811.0010100
.....GGTCGTTGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001
......GTCGTTGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001
...............................G----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------TTTGAGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.............................................................................................................................................................................CTG------TTTGAGTGTGTGTGA------GT---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
...............................................................................................................................................................................................GTGTGA------GT---GTTAGTGTTTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...........................................................................................................................................................................TTCTG------TTTGAGTGTGTGTGA------G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...................................................................................................................................................................................................................................................................................A-------------------ACGT--GAA---ATAGTGAAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTTTATTGTTGCTA--CCGC-T------T-----GCGT...............................................................................................................................2711.0010010
........CGTTGAGCATGGACGTGGCC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
....CGGTCGTTGAGCATGGACGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.............................................................................................................................................................................................GTGTGTGA------GT---GTTAGTGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
......................................................................................................................................................................................TTTGAGTGTGTGTGA------GT---G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.TGGCGGTCGTTGAGCATGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
................................................................................................................................................................................................................GTTAGTGTTTGTG-----------------------------TAAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
dm3
TTGGCGGTCGTTGAGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------TTTGAGTGTGTGTGA------GT---GTTAGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGAAA-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCA--CAAAGTGAAGAAA-TACTCGC-------ACATAAA-CCG--------------------------------------------------------------------------------------------ATG--TTA--------GTGTGTTTGTC--TAAGCCCT-----------------------------------------------------------------------------TC------TACCTC-T-TTTTTTGCTACCT-------GCCAATTTGTTAACTTTATTGTTGCTA--CCGC-T------T-----GCGTGCCGTGAATCAAAGTA----------ACAACAA-CCGCCACAACAACAACATGCACAAATA----------------------------------------------------AATGTAAGTGTGTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............AGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181617.00617000000000000000000000011000000000000110032002000110101000000000000000000000000000000300351040010000002006614109130000210010000000000000000000000000010112000000000000000000000002000000002000021100001048000000000000029913422000010004002000010100052400003431804477710611616276000001000125501700213000170122421051200521181312340261052451020000024171120
........CGTTGAGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23164.00640000000000000000000000000000000000000000100000010001000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100100030214232100100000000000000000010000000100100020000000000001100000001000201041000000000013201902100000000002100
.......TCGTTGAGCGCGGACGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18136.00360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200200000000000000000000000000000000000010000000000001000000000000000000000000000001000000100000000000000010000000000000000000000100000000000000110000400010321000000000000120000000000300000000000000001101000200000000002000
............GAGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19128.00280000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000001000300000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000200000000000000000000000000001003000000300020200231000000000200000
........CGTTGAGCGCGGACGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17121.002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCGTTGAGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000010010001000000100001000000000000000000000000000001000000000000000100000000000200000000012001100000000000000000000
......GTCGTTGAGCGCGGACGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000002000000000000000000000000000000000000100001000000000000000000000010000000000100100000000100010000110000000000000000
.............AGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000001010100200100000010010000
........CGTTGAGCGCGGACGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000000000000000000002000000001000100000000000000000000
........CGTTGAGCGCGGACGTGAGC-A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000040000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000101000000000000000001000000000100010
...................GACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.00100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000100000000001201000000000000000000010000000000000
..........TTGAGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001030000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000100000000000
...........TGAGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............AGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2619.0090000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001001100110000000000000000
........CGTTGAGCGCGGACGTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1918.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000002000000000200200000000000000000100
......................................................................................................................................................................................TTTGAGTGTGTGTGA------GT---G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1827.00140000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000010010001000000010000000000000000000000000110000000001000000000000000000210000
.........GTTGAGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000002000000002000100000000000000000000
......GTCGTTGAGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000100000000001000000000001000000001000000000000010
..GGCGGTCGTTGAGCGCGGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101002100000000000100
TTGGCGGTCGTTGAGCGCGGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000
...............CGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
.......TCGTTGAGCGCGGACGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000000000000100000001000000000000
............................................................................................................................................................................TCTG------TTTGAGTGTGTGTGA------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000
...................GACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000100
...............................................................................................................................................................................................................................................................................................................A---ATAGTGAAGCATAAAGGCA--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CGTTGAGCGCGGACGTGAGC-AT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...........TGAGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000010010000000000000000000000
......GTCGTTGAGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------ATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TATTTCTG------TTTGAGTGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100100000000000000000000000000000000000
...........TGAGCGCGGACGTGAGC-A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000000
.................CGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000
...........................C-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------TTTGAGTGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000200
..........................GC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------TTTGAGTGTGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000
........CGTTGAGCGCGGACGTGAGC-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..............GCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000001000000000000000000000000000000000000
.TGGCGGTCGTTGAGCGCGGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000
.TGGCGGTCGTTGAGCGCGGACGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001100000000000000000
.............................................................................................................................................................................CTG------TTTGAGTGTGTGTGA------GT---G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000010000000000000000
.............AGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000000000
..GGCGGTCGTTGAGCGCGGACGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000001000000000000
......................................................................................................................................................................................TTTGAGTGTGTGTGA------GT---GTTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000
..............................................................................................................................................................................................................................................................................ACGAAA-------------------ACGT--AAA---ATAGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CGTTGAGCGCGGACGTGAGC-ATC----------------------------------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000
............................................................................................................................................................................TCTG------TTTGAGTGTGTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1822.0040000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010100000000000000000000000000000000000000000000000
...................GACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTTCTG------TTTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................G------TTTGAGTGTGTGTGA------GT---G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1922.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000010010000000000000000000000
.....................................................................................................................................................................................................................TGTTTGTG-----------------------------TAAGAAGTTCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000
........CGTTGAGCGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCGTTGAGCGCGGACGTGAGC-A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010000000000000000
..........TTGAGCGCGGACGTGAGC-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............CGCGGACGTGAGC-ATG----------------------------------------------------------------------------------------------------------------------------------------TATTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100
............................................................................................................................................................................TCTG------TTTGAGTGTGTGTGA------G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
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...........TGAGCGCGGACGTGAGC-AT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTA----------ACAACAA-CCGCCACAAC...................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GA------GT---GTTAGTGTTTGTG-----------------------------TA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AAA-CCG--------------------------------------------------------------------------------------------ATG--TTA--------GTGTGTTTG................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
droEre2
ATGGCGGCCGCT-------------------------------------------------------------------------------------------------------------------------------------------CTGTCTTTGTGTCCATGTATTTCAG------TTTGAGTGTGTGTGCATGCGAGT---GTTTGTGCTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGAAG-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCA--TAAAGTGAAGAAAATAGTCGC---ACATACATAAA-CCC--------------------------------------------------------------------------------------------ATG--TTA--------GTGTGTTTGTT--CTAGCCCT-----------------------------------------------------------------------------TC------TACCTC-T-TTTTTTGCTACCT-------GTCAATTTGTAAACTTTATTGTTGTTA--CCGC-T------T-----GCGTGCCGTGAATCAAAGCA----------ACAACAA-CTACCACAACAACAGCATGCACAAATA----------------------------------------------------AGTGTAAGTGTGTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................GTGCTTGTG-----------------------------TAAGAAGTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...................................................................................................................................................................................................................................................................................................................................GCA--TAAAGTGAAGAAAATAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.................................................................................................................................................................GTCCATGTATTTCAG------TTTGAGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----GCGTGCCGTGAATCAAAGCA----------ACAAC................................................................................................2611.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAATTTGTAAACTTTATTGT............................................................................................................................................................2211.0010001000
...........................................................................................................................................................................TTCAG------TTTGAGTGTGTGTGCATGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
.........GCT-------------------------------------------------------------------------------------------------------------------------------------------CTGTCTTTGTGTCCATGTAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
........................................................................................................................................................................................................................................................................................................................GAAGCATAAAGGCA--TAAAGTGAAGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
....................................................................................................................................................................................................................GTGCTTGTG-----------------------------TAAGAAGTTCGGCGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
............................................................................................................................................................................TCAG------TTTGAGTGTGTGTGCATGCGAGT---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
..........................................................................................................................................................................................................................GTG-----------------------------TAAGAAGTTCGGCGGCA---ACGAAG-------------------AC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
......................................................................................................................................................................................................................................................................................................................................................................ATAAA-CCC--------------------------------------------------------------------------------------------ATG--TTA--------GTGTGTT..................................................................................................................................................................................................................................................................................................................2111.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCACAACAACAGCATGCACAA.....................................................................2411.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-CTACCACAACAACAGCATGCAC.......................................................................2411.0010100000
droYak3
TTGGCGGTCGTTGAGCGCGGAAGTGGCC-AAGGAA------GTGGTACAA---------------AAGGGCA--------CCTAGCCAGATTCGGAAAAGCATA-AGAACGCGATTTCGGTTTTCGTTGAATGGCCGCT------------CTGTCTTTGTGTCCATGTATTTGTG------TTTAAGTGTGTGCGAGTGCGACT---GTTTGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGAAG-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCG--TAAAGTGAAGAAAATACTCGC-------ACATAAA-CCC--------------------------------------------------------------------------------------------ATG--TTA--------GTGTGTTTGCT--CTAGCCCT-----------------------------------------------------------------------------TC------TACCTCTGTTTTTTTGCTACCT-------GCCAATTTGTTAACTTTATTGTTGTTA--CCGC-T------T-----GCGTGCCGTGAATCAAAGTA----------ACAACAA-CCGCCTCAGCAACAACATGCACAAATA----------------------------------------------------AATGTAAGTGTGTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................ATA-AGAACGCGATTTCGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200000020000
.....................................................................................................................................................................................................................................................................................................................................G--TAAAGTGAAGAAAATACTCGC-------AC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.........GTTGAGCGCGGAAGTGGCC-AAGGAA------GTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
....................AAGTGGCC-AAGGAA------GTGGTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTAACTTTATTGTT...........................................................................................................................................................1811.00101000000000
................................................................................................................................................................TGTCCATGTATTTGTG------TTTAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTA--CCGC-T------T-----GCGTGCCGTGA........................................................................................................................2211.00100000010000
.....................................................................................................ATA-AGAACGCGATTTCGGTTTTCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.......................................................................................................................................................................................TTAAGTGTGTGCGAGTGCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.............................................................................................................CGCGATTTCGGTTTTCGTTGAATGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
.........................................................................................................................................................................................................................................................................................................................................AAAGTGAAGAAAATACTCGC-------AC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
................................GAA------GTGGTACAA---------------AAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTATTGTTGTTA--CCGC-T------T-----G..................................................................................................................................2111.00101000000000
...............................................................................................................................................................................G------TTTAAGTGTGTGCGAGTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
........................................................................................................................................................................................................................................................................................................................GAAGCATAAAGGCG--TAAAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.........................................................................................................................................................................................AAGTGTGTGCGAGTGCGACT---GTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...................................................................................AGCCAGATTCGGAAAAGCATA-AGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000
..............GCGCGGAAGTGGCC-AAGGAA------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.....................................................................................................ATA-AGAACGCGATTTCGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000
..............................................................................................................................................................................................................................................................................................................AA---ATAGTGAAGCATAAAGGCG--TA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..............................AGGAA------GTGGTACAA---------------AAGGGCA--------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
...............................................................................................................................TGAATGGCCGCT------------CTGTCTTTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................AAA-CCC--------------------------------------------------------------------------------------------ATG--TTA--------GTGTGT...................................................................................................................................................................................................................................................................................................................1820.50101000000000
droEug1
TTGGCGGTCGTTGAGCGCGGAAGTGGCC-GAAAATA-----------CAA----TATTTACGTTTAAGGGCATATATATAG-----AAGAATCGGAAAATCATA-AGAACGCGAT------TTTTGTTGAATGGCCGCCT-----------CTGTCTTT--GTCCATGTATTC------------------------------GT---GTTTGTGTTTGTG-----------------------------TAAGAAGTTTGACGGCA---GCGACG-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCCA----AGAAAAGAAA-TA--------------------CCC-AAAA--------------------------CAACAAC-------GTGTTTGC-------T---------------------------------G--TGC--------TGCCGTTTGT-----AGCCCT-----------------------------------------------------------------------------TA---ACCTACGAT-TTTTTTTTGCTACCT-------GCCAATTTGTTAACTCTATTGTTGTTG--CTGC-T------T-----GCGTGCCGTGAATCAAAGCA----------ATAAAAAGCAACAACAACTACAACATGCACAAATA----------------------------------------------------AATGTAAGT--GTASizeHit CountTotal NormTotal
No Reads
droBia1
TTGGCGGTCGTTGAGCGCGGAAGTGGCC-AAAACC-----AGTGGG--AA---------------AAGGGCT--------TCTTGCCAGAAACGGAAAACCCTA-AGAACGCGAT------TTTTGTTGAATGGCCGCCG-----------CTGTCT-T--GTCCCTGTAGTTGTG------CCCGC----CTTTGT------CTG-TGATTGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGACG-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCCA----AGTGGAGAGAATACTCGC----TGTACATAAA-CCCCTACCCATACCTGCACCACTAAAAGTATCAACAACAAA-------GT-----------------------------------------------G--CTA--------GT---TTTG------AGCCCT-----------------------------------------------------------------------------C----TGCTACCTT-TTATTTTTGCTACCT-------GCCAATTTGTTAACTTTATTGTTGCTCCGCCGC-T------T-----GCGTGCCGTGGA----AGCA-----AAGCCAA----------------ATCAACAT-------CA----------------------------------------------------AATGTAAGT--GTASizeHit CountTotal NormTotal
No Reads
droTak1
GTGGCGGTCGTTGAGCGCGGAAGTGGCC-GAAAATATCAT-------------------------AAGGGCT--------GCTAGCCAGAAACGGAAGAGCATA-AGAACGCGAT------TTTTGTTGAATGGCCGCCT-----------CTGTCTTT--GTCCGTGTATTTGTG------T------------AA------G----AAGTGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGACG-------------------ACGT--AAA---ATAGTGAAACATAAAGGCCA----AGTGAAGAAAATAAACGT-------ACATAAAACCC-AAAA-----------------------CAACAACAA--------------------------------------------------------------------------------------AGCCCT-----------------------------------------------------------------------------TC---TGCTACCTT-TTATTTTTGCTACCT-------GCCAATTTGTTAACTTTATTGTTGTTTCGCCGC-T------T-----GCGTGCCGTAAATCCAAGCA-----------------------------------------AATA----------------------------------------------------GATGTAAGT--GTASizeHit CountTotal NormTotal
No Reads
droEle1
TTGGCGGTCGTTGAGCGCGGAAGTGGACCAAAAAA-AA-TAGTAG-------------------------TA--------GAAAACCCAAATCGGGAAATCATA-AGAACGCGAT------TTTTGTTGAATGGCCGCTATATG------------------------GGTGGCTG------TAGCTGTGTCTGTGT------GT---CTTTGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCA---ACGACG-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCCA----AGTGAAGAAAATACTCGT-------ACATAAAACTC-AAAA-----------------------CAACAACAAC-------GTGCCGGAGTCTCTTT-------------------------------GTG--T----------TTGTGTTTGTT--TTAGCCCT-----------------------------------------------------------------------------TA------GGACTCCC-CTTGCTGCTACCT-------GCGAATTTGTTAACTTTATTGTTGTTACCTTGC-T------T-----GCGTGCCGTGAGTCCAAGCA----------AC----------------AACAACATGTTTGAGTA----------------------------------------------------AATGTAAGT--GTASizeHit CountTotal NormTotal
No Reads
droRho1
TTGGCGGTCGTTGAGCGCGGAAGTGGCC-AAAAAA-TC-T-------------------------AAGGGCA--------GAAAACCAAAATCGGGAAATCATA-AGAACGCGAT------TTTTGTTGAATGGCCGCTA----------------------------TATAGTTG------TCTGTGTGTGTGTGT------GT---GTGAATGTTTGTG-----------------------------TAAGAAGTTCGTCGGCA---ACGACG-------------------ACGT--AAA---ATAGTGAAGCATAAAGGCCA----AGTGAAGAAAATATAAGA-------ACATAAAATCC-AAAA-----------------------CAACAACAAC-------GTGCCGGAGTCTCGTT-------------------------------GTG--TGT--------TTGTGTTTGTT--TTAGCCCT-----------------------------------------------------------------------------TC---GTCTACCT-----TGACTGCTACCT-------GCGAATTTGTTAACTTTATTGCTGTTG--CCCC-T------T-----GCGTGCCGTGAATTCAAGCA----------AC----------------AACAACATGTTTGAGTA----------------------------------------------------AATGTAAGT--GTASizeHit CountTotal NormTotal
No Reads
droFic1
GAGGCGGTCGTTCAGCACGGAAGTGGCC-AAAAAAA---TAGTGG--CAG--------------------AA--------GAAGACTAGTAACGCAGAACCATA-ATAACGCGAT------TTTTGTTGAATGGCCGCT------------CTGT----------------------------------------CT------GT---CTATGTGTTTGTG-----------------------------TAAGAAGTTCGGCGGCGACGACGACG-------------------ACGC--GAA---ATAGTGAAGCATAAAGGCCA----AGTGAAGAAAATACTCGT-------ACATGAAACCC-AAAA--------------------------CTACAAC-------GTGCCGGGTTTTCTTTGTGT------G-----------TGTT---GACTG--TGG--------TTGTGTTTGTT-TTTAGCCCT-----------------------------------------------------------------------------TC------TAACTT-TATTTTTCGCTACCT-------GCCAATTTGTTAACTTTATTGTTCTTG--CTGC-T------G-----GCGTGCCGTGAATCCAAGCA----------AC----------------AACAACATGCCGGAATA----------------------------------------------------GACGTAAGT--GTTSizeHit CountTotal NormTotal
No Reads
droKik1
TTCACAGTCGTTGAGCGCGGAAGTGGCA-AAGGAG-----C------CAA----------------AGGA-----------AAAACCCAC-----------ACAGACAACGCGAT------TTTTGTTGAATGGCCGCT--------------------------------------------------GTGTGTGC------TT---GTTTGTGTTTGTGTTGTTCGGCTAGTGTCTATGTAATCGCGCAAAGAAGTTCGGCGGCA---GCGACT-------------------GTGT--AAA---ATAGTGAAGCATAAAGGCCA----AGCGAAGAAAAC-------------ACATAAA-ACC-AAAA--------------------------CAACAAAGTTCCCCTTATTCT--TCAGAGTGTGT------G-----------TGTTTTCGGCTG--TTATAGTGTTAGTGT-------------TCC--------------------------------------------------TTGTTTATTTCTGTTATATCTTGGCCCTTCCTCGTCTACC------TTTTTGCTACCT-------GTGAATTGGTTAACTTTGTTGTTGCAG--CGGC-T------T-----GCGTGCCGTCATTA-AAGCGAGTTAAAACCAA----------------AACAACATGCTCGAATATTAGTCGGCAAATGTAAGTACCAGCGTGAGTGTGGGTGTAAATGCAAATGTAAGAGTAAGT--GTASizeHit CountTotal NormTotal
No Reads
droAna3
CAGTCGGTCGTCGAGCAAGGAAGCCAA-----GAG---------------CCAGCTCCTCCGGCG----------------------A-----------------GAGATGCCAT------T-TTCCTGAATGGCCGCCCCACG------------CTA--------------GTG------TCTGT----CTGTGT------GTGTTAAGTGTGAGCGCG-----------------------------AAAGAAGTTCGGCGGCA---AA-------------------------GC--AAA---ACACTGGAGCATAGAGGCCA----AGTGAAGAAACTA-------------CATAAA-GAG----------------------------AGCCGTCGCC-------GTTCTTGCTTCTGTTT-------------------------------CTG--TGA--------GTGTGTGGGT-----AGCCCT-----------------------------------------------------------------------------TC------TACCTC------CGGGCTACCT-------GTGAATCCGTTGGCTCTGCTGTTGTGA--CGCC-T------T-----GCGTGCCGTGGGCTGAAAC-----------------------------AACAACATGCAAAAATA----------------------------------------------------GTGGTA--C--GTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................GTG------TCTGT----CTGTGT------GTGTTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.................AGGAAGCCAA-----GAG---------------CCAGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
....................................................AGCTCCTCCGGCG----------------------A-----------------GAGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCT-------GTGAATCCGTTGGCTCTGCT..............................................................................................................................................................2611.001100000
.......................CCAA-----GAG---------------CCAGCTCCTCCGGCG----------------------A-----------------GA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGCTGTTGTGA--CGCC-T------T-----GC.................................................................................................................................2211.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCTGCTGTTGTGA--CGCC-T------T-----GCGTGC.............................................................................................................................2811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGA--CGCC-T------T-----GCGTGCCGTGGGCT.....................................................................................................................2711.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCT-------GTGAATCCGTTGGCTCTGCTGTT...........................................................................................................................................................2711.001100000
..............................................................................................................................................................................................................................................................................................................................................GAAGAAACTA-------------CATAAA-GAG----------------------------AGC......................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTT-------------------------------CTG--TGA--------GTGTGTGGGT-----AGC.......................................................................................................................................................................................................................................................................................................2511.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--CGCC-T------T-----GCGTGCCGTGGGC......................................................................................................................2111.001010000
......GTCGTCGAGCAAGGAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
....................................................................................................................................................................................................................GTGAGCGCG-----------------------------AAAGAAGTTCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..................GGAAGCCAA-----GAG---------------CCAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
......GTCGTCGAGCAAGGAAGCCAA-----GAG---------------CC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
droBip1
GAGTCGGTCGTCGAGTGCGGAAGCGAA-----AAC---------------TCAGCTCCTCCGGTC----------------------C-----------------GAGGTGCCAT-------TTTCTTGAATGGCCGCCCCACGCTAGAGTCTGT------------------CTG------TCTAT----CTGTGT------GTGTTAAGTGTGAGCGCG-----------------------------AAAGAAGTTCGGCGGCG---AAGA---------------------------AAA---ATAGTGGAGCATAAAGGCCA----AGTGAAGAAACTACATGAAGAAACTACATAAA-GAG----------------------------AGACGACGAC-------GTTCTTGCTTCTGTTT-------------------------------CTG--TGA--------TTGTGTTGGT-----GGCCCT-----------------------------------------------------------------------------TC------TACCTC------CGGGCTACCT-------GTGAATTTGTTAACTCTGTTGTTGTGA--CGCC-T------T-----GCGTGCCGTGGGTTGAGGCA-----------------------------ACAACATGCAAAAATAGTGGTA------------------------------TGTAAACAC-------GATGTAAGT--GTASizeHit CountTotal NormTotal
No Reads
dp5
TGGGCA-----------------------------------------------------------------------------------------------------------------------------TGGCTG-------------------------------CATTTGTG------TCGG-------------------------TGTGTGTGTG---------------------------G-ACAGAACTTCGGCGGCA---GCGACAAACGAAAACGTCAAAAACAACGTAAAAA---ATAGTGAAGCATAAAAGCAA--AAACTGAAGAAAA---------------------ACCC-AAGA------------------------AGCAACCGC-------GTGCCCG--TCCAAGTGTGT------G-----------T----------GTTTC--AGTGTGT------CTGTGCGT------GTGTCTTCTTGTTGTTATTGTGTTTGTGAATAGTGGGAAGTGTTTTTGTTTTGTTACCTTCTGGCGTACCCTACCCTACCCTACCCTA-------CCCTACCCTACCTGGAAGGGGCTAATGCAGGAATCTGTTCGGTTCTG--CCGC-TTTGCATG-----GCGTGCCGGGAACACCAGC-----------------------------AACAACATGCACAAATAGTAGCAT------------------------TCGCCTGTA------------CATGTAAAT--GTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................TG---------------------------G-ACAGAACTTCGGCGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000002
.........................................................................................................................................................................................................................TGTG---------------------------G-ACAGAACTTCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000002
..........................................................................................................................................................................................................................GTG---------------------------G-ACAGAACTTCGGCGGCA---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000001
.........................................................................................................................................................................................................................TGTG---------------------------G-ACAGAACTTCGGCGGCA---GCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGTGTGT------G-----------T----------GTTTC--AGTGTGT------...................................................................................................................................................................................................................................................................................................................2411.0010010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTTTGTTTTGTTACCTTCTGGCGTA.................................................................................................................................................................................................................................2811.0010010000000
..........................................................................................................................................................................................................................GTG---------------------------G-ACAGAACTTCGGCGGCA---GCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000100
...........................................................................................................................................................................................................................TG---------------------------G-ACAGAACTTCGGCGGCA---GCGACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACATGCACAAATAGTAGC.............................................................2211.0010010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--CCGC-TTTGCATG-----GCGTGCCGGGA........................................................................................................................2511.0010000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCCGGGAACACCAGC-----------------------------AAC................................................................................2211.0010000010000
..................................................................................................................................................................................................................................................................................................................................................................................GA------------------------AGCAACCGC-------GTGCCCG--TC.............................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
..........................................................................................................................................................................................................................GTG---------------------------G-ACAGAACTTCGGCGGCA---GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAATAGTGGGAAGTGTTTTTGT....................................................................................................................................................................................................................................................2511.0010100000000
droPer2
TGGGCA-----------------------------------------------------------------------------------------------------------------------------TGGCTG-------------------------------CATTTGTG------TCGG-------------------------TGTGTGTGTG---------------------------G-ACAGAACTTCGGCGGCA---GCGACAAACGAAAACGTCAAAAACAACGTAAAAA---ATAGTGAAGCATAAAAGCAA--AAACTGAAGAAAA---------------------ACCC-AAGA------------------------AGCAACCGC-------GTGCCCG--TCCAAGTGTGT------G-----------TATGTGTGTGTGTTTC--AGTGTGT------CTGTGCGT------GTGTCTTCTTGTTGTTATTGTGTTTGTGAATAGTGGGAAGTGTTTTTGTTTTGTTACCTTCTGGCGTACCCTACCCTA-----CCCTA-------CCCTACCCTACCTGGAAGGGGCTAATGCAGGAATCTGTTCGGTTCTG--CCGC-TTTGCATG-----GCGTGCCGGGAACACCAGC-----------------------------AACAACATGCACAAATAGTAGCAT------------------------TCGCCTGTA------------AATGTAAAT--GTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................G--TCCAAGTGTGT------G-----------TATGT.............................................................................................................................................................................................................................................................................................................................................1812.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTGGGAAGTGTTTTTGTTTT.................................................................................................................................................................................................................................................2311.001010000
............................................................................................................................................................................................................................G---------------------------G-ACAGAACTTCGGCGGCA---GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATAGTGGGAAGTGTTTTTGTTTT.................................................................................................................................................................................................................................................2711.001010000
......................................................................................................................................CTG-------------------------------CATTTGTG------TCGG-------------------------TGTGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.....A-----------------------------------------------------------------------------------------------------------------------------TGGCTG-------------------------------CATTTGTG------TCGG-------------------------TG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGT------G-----------TATGTGTGTGTGTT....................................................................................................................................................................................................................................................................................................................................19200.051000001
droWil2
CTGTCGGTCGTTGAGCGCGGAAGTGAGG-GTG-------------------------------------------------------------------------------ATATTTCTGGTGTTGTTGAATGGCTGCCTCGA--------ATG-GCAAGCGCCT----ACATCTA------CATCTC--TGTGTGC------GT--TGTTCGTGTATG-------------------------------TAAGAAGAATATCGGCGGCAACGACGG------------CAAACAACGTA-AAA---ATTGTGAAGCATAAAGGCCA----AGAGAAGCGAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............GCGCGGAAGTGAGG-GTG-------------------------------------------------------------------------------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00300012
...........TGAGCGCGGAAGTGAGG-GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200
........CGTTGAGCGCGGAAGTGAGG-GTG-------------------------------------------------------------------------------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200101
......GTCGTTGAGCGCGGAAGTGAGG-GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.............AGCGCGGAAGTGAGG-GTG-------------------------------------------------------------------------------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........................AGG-GTG-------------------------------------------------------------------------------ATATTTCTGGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
................GCGGAAGTGAGG-GTG-------------------------------------------------------------------------------ATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
..............GCGCGGAAGTGAGG-GTG-------------------------------------------------------------------------------ATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
................................................................................................................................................................................................................GTTCGTGTATG-------------------------------TAAGAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..GTCGGTCGTTGAGCGCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...............CGCGGAAGTGAGG-GTG-------------------------------------------------------------------------------ATATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.................................................................................................................................................................GCCT----ACATCTA------CATCTC--TG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
...................................................................................................................................................................................................................................................................................................................ATTGTGAAGCATAAAGGCCA----AGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.............................................................................................................................................................................................................................................................................AACGACGG------------CAAACAACGTA-AAA---ATTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
...........................................................................................................................................................................................C--TGTGTGC------GT--TGTTCGTGTATG-------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...........TGAGCGCGGAAGTGAGG-GTG-------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
..........TTGAGCGCGGAAGTGAGG-GTG-------------------------------------------------------------------------------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
..............................TG-------------------------------------------------------------------------------ATATTTCTGGTGTTGTTGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..............GCGCGGAAGTGAGG-GTG-------------------------------------------------------------------------------AT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..........TTGAGCGCGGAAGTGAGG-G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...............CGCGGAAGTGAGG-GTG-------------------------------------------------------------------------------AT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
........CGTTGAGCGCGGAAGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
............................................................................................................................TGTTGAATGGCTGCCTCGA--------ATG-GCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
droVir3
CTGGCA--CGACAAGCATGGCCACATCC-AC------------------------------------------------------------------------------------------------------------------------------------------AGCTACGTTCACGTTCAT----------------GT---GTGTGTGTGGATG-----------------------------AAAGAACAACAGCGGCA---GCAGCG-------ACG---------TC----AAAATAGTAGTGAAGCATAAAGACCAACAAAATAAAGAAGAAATAAG----------------CCC-AAAACTTAACAA---------------TAACAACAG---------------C-------AGCACCAACGCCAGCAAACAATCA--------ACG--TCA--------GCGTCT-TGTT--T-------------TTTTTTTTTTTTCTGTTCTTGAATGCGAGGTGGAGTTGCTGT--TGTTGGCACCTC--------------------GTGTACCT--------------------------GGATCAGTTGA----G------CTG--CCGTATTCGCGTGTTCCGCCGCGCTGTAAATCTCAGTT----------A-------------------CAAAGTGCATCAGTGTTAGTT------------------------------------------------AGCAATT--GTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................TCACGTTCAT----------------GT---GTGTGTGTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000020000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................AAAGAAGAAATAAG----------------CCC-AAAACG..............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTCAGTT----------A-------------------CAAAGTGCATCA.....................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................GATG-----------------------------AAAGAACAACAGCGGCA---GCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCGAGGTGGAGTTGCT......................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTCAGTT----------A-------------------CAAAGTGCATC......................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................GCTACGTTCACGTTCAT----------------G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACCT--------------------------GGATCAGTTGA----G------C.........................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
.................TGGCCACATCC-AC------------------------------------------------------------------------------------------------------------------------------------------AGCTACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
....................CCACATCC-AC------------------------------------------------------------------------------------------------------------------------------------------AGCTACGTTCACGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
TGGTCGGTCGTTGAGCGTGGAAGTGCTC-AGAGTG-----C-------GA--------------------GA--------GAGAACGGGCAACGGGCA-----C-AGAGCGCGAT------TTG-TTTGAATGACTGGTACGT--------TTACGTTCGCGTCC----ATTTCTA------TGTGATTGTGTGTGTCTGTGCGCG-TATGTGTGTGTGTG-----------------------------GGTGAAGAATAACAACA---CCGATA-------------------TC----GAA---ATAGTGAAGCACAAAGGCCA----AGCAAAGAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................TC-AGAGTG-----C-------GA--------------------GA--------GAGAACGGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000002
..............GCGTGGAAGTGCTC-AGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
...............................AGTG-----C-------GA--------------------GA--------GAGAACGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
......GTCGTTGAGCGTGGAAGTGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
......GTCGTTGAGCGTGGAAGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
..............GCGTGGAAGTGCTC-AGAGTG-----C-------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.....GGTCGTTGAGCGTGGAAGTGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...........................................................................................................................G-TTTGAATGACTGGTACGT--------TTACGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.....................................................................................CGGGCAACGGGCA-----C-AGAGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............AGCGTGGAAGTGCTC-AGAGTG-----C-------GA--------------------GA--------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.................................................A--------------------GA--------GAGAACGGGCAACGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
......................GTGCTC-AGAGTG-----C-------GA--------------------GA--------GAGAACGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...........................C-AGAGTG-----C-------GA--------------------GA--------GAGAACGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
......................GTGCTC-AGAGTG-----C-------GA--------------------GA--------GAGAACGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.......TCGTTGAGCGTGGAAGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................................................CGGGCAACGGGCA-----C-AGAGCGCGAT------TTG-T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
.................................................................................AGAACGGGCAACGGGCA-----C-AGAGCGCGAT------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
......................GTGCTC-AGAGTG-----C-------GA--------------------GA--------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...................GAAGTGCTC-AGAGTG-----C-------GA--------------------GA--------GA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.......................................................................................GGCAACGGGCA-----C-AGAGCGCGAT------T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
TGGTCGGTCGTTGAGCGTGGAAGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.......................................................................................GGCAACGGGCA-----C-AGAGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.................................................................................................................................................................................................................TGTGTGTGTGTG-----------------------------GGTGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051001000

Generated: 05/19/2015 at 03:03 PM