ID:

dsi_17700

 Coordinate:

2r:10095825-10095974 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.4 -17.3 -17.2

Flybase annnotation

exon [2r_10095975_10096106_-]; five_prime_UTR [2r_10095975_10096106_-]; intron [2r_10093171_10095974_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCGCTTTTCGACTCGGTCGTTTACCTAACATACCCGCTTGCCGATCGCTGGTCAGTTTAAATGTTTAAGCCGCCGGAGTGCTGGAAGCTTCGCCTTGGCTCGAGCTAGTGCTAAGGAGAAAATAAAACAGATTATATAACGTGTAATTAGAGCACTCTGTTGGCAGCCACTGGTTAACGTTAACGTTAGCGTTGTTTTCTAGCGCACACATGACTTGGCATTTCTGGGCTCCGAGCCCCAAGCCCACTTT
********************************************************************************........(((.(((((((..........))))))).))).....((((((.........((((.......))))))))))....************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 O002
Head
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
..................GTTTACCTAACCTAACCGGT.................................................................................................................................................................................................................... 20 3 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
...............................ACCCGCTTGCCGATCGCTG........................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................TACCCGCTTGCCGATCGCTGT....................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................CTGGAAGCTTCGCCTTGGC....................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................ATACCCGCTTGCCGATCGCTGT....................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TAGAGCACTGTGTTGACA..................................................................................... 18 2 3 1.00 3 0 0 0 0 3 0 0 0 0 0 0 0 0
...........................ACATACCCGCTTGCCGATCGCTGGTCAG................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GTTTTCTAGCGCACACATGACTTGGCAT............................. 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................ACCCGCTTGCCGATCGCTGGTC..................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................CTGGAAGCTTCGCCTTGG........................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................................CCCGCTTGCCGATCGCTG........................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........CTCGGTCGTTTACCTAAC............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TGTAATTAGAGCACTCTGTTGGCA..................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................ATACCCGCTTGCCGATCGCTG........................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.CGCTTTTCGACTCGGTCGTT..................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TGACCTTAACGTTAGCGT.......................................................... 18 2 2 1.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0
.........................TAACATACCCGCTTGCCGA.............................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
........CGACTCGGTCGTTTACCTAACATACCC....................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TTAGAGCACTGTGTTG........................................................................................ 16 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................AGAGCACTGTGTTGGC...................................................................................... 16 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AATGTGAAGGTTAGCGTTGT....................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...................TTTACCTAACCTAACCGGT.................................................................................................................................................................................................................... 19 3 12 0.25 3 0 0 3 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TAGAGCACTGTGTTGA....................................................................................... 16 2 20 0.20 4 0 0 0 0 4 0 0 0 0 0 0 0 0
...............................................................................................................CATGGAGAAAATAAAACAG........................................................................................................................ 19 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................GTTAGAGCACTGTGTTG........................................................................................ 17 2 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................GCCGGAGTGGTGGAA.................................................................................................................................................................... 15 1 19 0.11 2 0 0 0 0 0 0 2 0 0 0 0 0 0
........................................................................................................................................AAACGTGTCATTAGGGCACT.............................................................................................. 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................GCCCTGGCTCGAGCT................................................................................................................................................ 15 1 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CTGACCTTAACGTTAGCGT.......................................................... 19 3 14 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................TAGAGCACTGTGTTGAC...................................................................................... 17 2 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................AGACGCCGGAGTGGTCGAA.................................................................................................................................................................... 19 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................................GTAGAGCACTGTGTTGACA..................................................................................... 19 3 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................TAGAGCACTGTTTTGGC...................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...........ATCGGTCGTTTACCG................................................................................................................................................................................................................................ 15 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........ACGCGGTCGTTCACTTAA.............................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................CTCTGTTGGGAGCCA................................................................................. 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................TTTACCTAACCTAACCGG..................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGCGAAAAGCTGAGCCAGCAAATGGATTGTATGGGCGAACGGCTAGCGACCAGTCAAATTTACAAATTCGGCGGCCTCACGACCTTCGAAGCGGAACCGAGCTCGATCACGATTCCTCTTTTATTTTGTCTAATATATTGCACATTAATCTCGTGAGACAACCGTCGGTGACCAATTGCAATTGCAATCGCAACAAAAGATCGCGTGTGTACTGAACCGTAAAGACCCGAGGCTCGGGGTTCGGGTGAAA
*************************************************************************************........(((.(((((((..........))))))).))).....((((((.........((((.......))))))))))....******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
.................................................................................................................................................................................................................TACTGAACCGTAAAGACCCGA.................... 21 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................GGTCGGTGACCAATTGCAATT................................................................... 21 1 1 1.00 1 1 0 0 0 0
..................................GCGGCCGCCTAGCGACCAGTCA.................................................................................................................................................................................................. 22 3 2 0.50 1 0 0 1 0 0
.........................CTTGTATGGGCGAAC.................................................................................................................................................................................................................. 15 1 7 0.14 1 0 0 0 1 0
...................................................................TCGGTGGCCTCACGA........................................................................................................................................................................ 15 1 8 0.13 1 0 0 0 1 0
...................AAATGGATTGGATTGGC...................................................................................................................................................................................................................... 17 2 16 0.13 2 0 0 0 0 2
................................................................................................................................................................ACCGGCGGTGACCAAGTGT....................................................................... 19 3 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:10095775-10096024 - dsi_17700 TCG-------CTT------------------------------------------TTCGACTCGGTCGTTTACCTAA-----CATACC--CGCTT---GCCG-------A--TCGC---TGGTCAG-TTTAAATGTTT---------AA----GCCGCCG------------------------------------------------GAGTGCT----GGAAGCTTC--GCCTTGGCTCGAG------CTAGTGCTAAGGAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGCACTCTG-TTG-GC-----A-------------------GCCACTGGTTAACGTTAACG-TTAGCGT------TGTTTTCT---AGCGC-ACACATGACTTGGCATTTCTG--------------GGCTCCGAGC--------------CCCAAGCCCACTTT------
droSec2 scaffold_1:6951147-6951396 - TCG-------CTT------------------------------------------TTCGACTCGGTCGTTTACCTAA-----CTTACC--CGCTT---GCCG-------A--TCGC---TGGTCAG-TTTAAATGTTT---------AA----GCCGCCG------------------------------------------------GAGTGCT----GGAAGCTTC--GCCTTGGCTCGAG------CTAGTGCTAAGGAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGCACTTTG-TTG-GC-----A-------------------GCCACTAGTTAACGTTAACG-TTAGCGT------TGTTTTCT---AGCGC-ACACATGACTTGGCATTTCTG--------------GGCTCCGAGG--------------CCCAAGCCCACTTT------
dm3 chr2R:9432606-9432865 - TCG-------CTT------------------------------------------TTCGACTCGGTCGTTTACCTAC-----CTTACC--CGCTTGCCGTCG-------A--TCGC---TGGTCAG-TTTAAATGTTT---------AA----GCCGCCG------------------------------------------------GAATGCT----GGAAGCTTC--GCCTTGGCTCGAG------CTAGTGCTAAGGAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGCACTTTG-TTG-GC-----A------------------TGCCACTAGTTAACGTTAACG-TTAACGTTAACGCTGTTTTCT---AGCGC-ACACATGACTTGGCATTTCTG--------------GGCTCCGAGC--------------CGCAAGCCCACTTT------
droEre2 scaffold_4845:16383577-16383835 + TCG-------CTTTTCGTGTTGCGATTCAATTTGATTGGATCCGATTCGATTCGGTTCGATTGGGTCGTTTACCCAC----------C--T-------GCC------------TGT---TGGTCAG-TTTATAAGTTT--------AAA----GTCGCCG------------------------------------------------TAGTGCT----GGAAGCTTT--GCCTTGGCTCGAG------CTGGTGCTAAGGAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGCACTTTG-CTG-GC-----A-------------------GCCACTGCTTAACG----------------------TTTTCT---ATCGC-AGACATGACTTGGCATTTCTG--------------GGCTC---------------------CAAGCCCACTTT------
droYak3 2R:7519722-7519981 + TCG-------CTTTTCGTGTTGCGATTCCATT--------------------TGATTCCATTCGGTCGTTTACCTAC-----C-TGCC--CGCTTGCCGCCG-------A--TCGC---TGGTCAG-TTTAAAAGTTT--------AAA----GCCGCCG------------------------------------------------GATTGCT----GGGAGCTTT--ACCTTGGCTCGAG------CTGGTGCTAAGGAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGCACTTTG-TTG-GC-----A-------------------GCCACTGGTCAACG----------------------TTTTCT---AGCGC-AGACATGACTTGGCATTTCTG--------------GGCTCCAAGC--------------CCCAAGCCCACTTT------
droEug1 scf7180000409758:290669-290896 + GCG-------GTTTTTTCG--------------------------------TCGTTTCGAGTCGGTCGTTTACCTGTTCATGTTTACCGCCGC----TGCCG-------A--TCGCTGTTGGTCAG-TTT----------------AA--------------------------------------------------------------------------AGCTTC--GCCTTGGCTCGAG------CTTGTGCTAAAAAGAAAATAAAACAGATTATATAA-CGTGTAATTAAA-TATTTTG-TTG-CC-----A-------------------ACCACTGGTTAACA----------------------TTTTCT---AGCGC-ATACATGACTTGGCATTTCTG--------------AGGTCTGGGC--------------CCCCAGCCCACTAT------
droBia1 scf7180000302291:738130-738360 + TCG--------------------------------------------------------TTTCGGTCGTTTACCTGC-------------CGTTTGCCGCCG-------A--TCGC---TGGTCAG-TTT----------------AAA----GCCACCG------------------------------------------------GGGAGCT----TCAAGCTTC--GCATTGGCTCGCG------CTTGTGCTAAAAAGAAAATAAAACAAATTATATAA-CGTGTAATTAGAGTACTTTG-TTG-CC-----A-------------------GCGACTGGCTAACA----------------------TTTTCT---AGCGC-AGACATGACTTGGCATTTCTTGGGTCTGGGGTCTGGGGTCTGGGC--------------TCC-AGCCCACTTT------
droTak1 scf7180000415379:612500-612720 - GCG-------GTTTT-------------------------------------CGTTTCGAGTCGGTCGTTTACCTGC-------------CGCTTACCGCCG-------A--TCGCTGCTGGTCAG-TTTCAA-CTTT--------A--------------------------------------------------------------------------AAGCTTC--GCCTTGGCTCGCG------CTTGTGCTAAAAAGAAAATAAAACAGATTATATAA-CGTGTAATTGGAGTACTTTG-TTG-CC-----A-------------------GCCACTGGCTAACA----------------------TTTTCT---AGCGC-AGACATGACTTGGCATTTCTG--------------GGGTCTGAGC--------------CCC-AGCCCACTTT------
droEle1 scf7180000491282:674999-675212 - TTT-------------------------------------------------CGTTTCGAGTCGGTCGTTTACCTGG--------------------CGCCG-------A--TCGC---TGGTCAG-TTT----------------AAA----GCCGCCG------------------------------------------------G--TGCT----GGAAACTTC--GCCTTGGTTCGCG------CTTGTGCTAAAAAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGTACTTTG-TTG-CC-----A-------------------GCCACTGGTTA-CT----------------------TTTTCT---AGCGC-AGACATGACTTAGCATTTCTG--------------GGGTCTGGGA--------------CCC-AGTCCACTTT------
droRho1 scf7180000780106:50142-50360 + GCG-------GTTTT-------------------------------------CGTTTCGAGTCGGTCGTTTACCTGC--------------------CGCCA-------A--TCGC---TGGTCAG-TTT----------------AAA----GTCGCCG------------------------------------------------AA--GCT----GGAAGTTTC--GCCTTGGTTCGCG------CTTGTGCTAAAAAGAAAATGAAACAGATTATATAA-CGTGTAATTAGAGTACTTTG-TTG-CC-----A-------------------GCCACCGGTTA-CT----------------------TTTTCT---AGCGC-AGACATGACTTGGCATTTCTG--------------GGGTCTGGGC--------------CCC-AGCCCACTTT------
droFic1 scf7180000454039:247958-248176 - TT-----------------------------------------------------TTTGAGTCGGTCGTTTACCTGC----------C--CGC-------CGATCACCGA--TCGC---TGGTCAG-TTT----------------GAA----GCCGCCG------------------------------------------------TA--GCT----GGAAGCTTC--GGCTTGGTTCGCG------TTTGTGCTAAAAAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGTACTTTG-TTG-CC-----A-------------------GCCACTAGTTAACT----------------------TTTTCT---AGCGC-AGACATGACTTGGCATTTCTG--------------GGGTCTGGGC--------------CCC-AACCCACTTT------
droKik1 scf7180000302277:398203-398501 + TC--------------------------------------------------CGATTCGATTCGTTCGTTCACCTGT--------------------TGCCG-------A--TCGC---TGGTCAG-TTTAAAT--TTAAAGTA--AAA----GCCGCTG---TTAC--AGTT-ACT--CTTGTTGTTGGTGTT--GTTG--CTTCTGGA--GCT----GGAAGTTTC--GCCTTGGTTCGCG-----TTTTGTGCTAAAACGAAAACAAAACAGATTATATAA-CGTGTAATTAGAGTACTTTG-TTG-CCTTGCCT----G--TCCAGTGGCTATGCTACTGGTGG-C------GCTTGGCGT--------TTTTCC---AACGC-AGACATGACTTGGCATTTCTG--------------GGGTCTGAGCCTCCCACTCCC---CCC-AGCCCACTTT------
droAna3 scaffold_13266:16728297-16728588 - TCGGAAAACGGTT-T-------------------------------------CGTTACGTTTCGGTCGTTTACCTGC--------------------CTCCGATCGCTGCTGCTGC---TGGTCAG-TTT----TTT---------TAA----GCCGCAT-----AT--GGTTTAATATTT---------TGTT--GTTGCACTTCTGGG--GCACAAAAAAAA-TTCCAGCCTTGGCTCGCG------TCTGTGCTAAAAAGAAAATAAAAGCGATTATATAA-CGTGTAATTAGAGTACTTTTGATAGCG-----AGCCGAGCTTCAGTAGCTTAG---CTGGC---------------------------TTTTCT---AGTGC-AGACATGACTTGGCATTTGTG--------------GGGTCTGGGC--------------CCC-AACCCACTTTCGATTT
droBip1 scf7180000396384:836316-836533 - ACG-------GTT-T-------------------------------------CGTTACGTTTCGGTCGTTTACCTGC--------------------CTCCGATCGCTG---CTGC---TGGTCAG-TCT------T---------TAA----GCCGA--------------------------------------------------GTTTGTA----AAAAA-TTCCAGCCTTGGCTCGCG------TTTGTGCTAAAAAGAAAATAAAACCGATTATATAA-CGTGTAATTAGAGTACTTTG-GTAGCC-----A-------------------G------GCGAGC--------------------------TTT---AGTGC-AGACATGACTTGGCATTTGCG--------------GGGTCTGGGC--------------CCC-AACCCACTTT------
dp5 3:8269732-8269949 - GCG-------ATC---------------------------------------TGTTTTGTTTCGGTCGTTTACCTGG--------------------TG-------------GCGC---TGGTCAGCTTT----------------AAAGCTACCCGCCCCTGTCTCTT-------------------------CG----------------------------------GCTCCGATTCGCGCCTCATTTTGTGCTAAAAAGAAAATATAACA-ATTATATAA-CGTGTAATTAGAGTAATTTG-TTG-G--------------------------------------------------------------TTGTCTAGC--CTCAAAACTTGGCTTACCTTTTCTGT-------------GGGTC--AGT--CCCAGTTTCAGTCCC-GTCCCACTTT------
droPer2 scaffold_4:2151775-2151992 - GCG-------ATC---------------------------------------TGTTTTGTTTCGGTCGTTTACCTGG--------------------TG-------------GCGC---TGGTCAGCTTT----------------AAAGCTACCCGCCCCTGTCTCTT-------------------------CG----------------------------------GCTCCGATTCGCGCCTCATTTTGTGCTAAAAAGAAAATATAACA-ATTATATAA-CGTGTAATTAGAGTAATTTG-TTG-G--------------------------------------------------------------TTGTCTAGC--CTCAAAACTTGGCTTACCATTTCTGT-------------GGGTC--AGT--CCCAGTTTCAGTCCC-GTCCCACTTT------
droWil2 scf2_1100000004514:3776622-3776844 - TCA-------GTT------------------------------------------TTTTTTTCGGTCGTTTACCTGGTCAAGCT----------TTTTGGCA-------A--G--CTGTTGGTGTG-TGTGTGAGTGT------ATGTA----T----------------------------------------TAGCTC--------CA--TTT----CGAAGTTTC--G----------CGG-----CTTGTGCTAAAATAATAATC---AATATTATATAATCGTGTAATTAGTGTGCGTTT-GTG---------------------------------TGATTATTT----------------------TTTTCT---AGCTAAATACATGACTTGGCATTTCTT--------------GGCATC-AGC-----AAGCCA---TCT-AACCCACTTT------
droVir3 scaffold_13324:2629337-2629504 - TGT-------ATT------------------------------------------TCTGTGCCGCGTATTCACTCTCTCATACT----------CTCTGTCG-------G--TCGT---TGGCTTT-GCT------T---------GAA----GCTC---------------------------------------------------GG--GCT----TAAAGTTTC--G--------------------TGTGCTT-------AATACGCCATCTTATATAA-CATGTAATTAGATGACTTTT-TTG-TT-----A-------------------A------ATTG--C----------------------TTTTCC---AGCTT-A-ACGTGACCTGGCATTTC------------------------------------------------------------
droGri2 scaffold_15112:4882535-4882561 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATAA-CATGTAATTAGAGGACTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCG-------CTT------------------------------------------TTCGACTCGGTCGTTTACCTAA-----CATACC--CGCTT---GCCG-------A--TCGC---TGGTCAG-TTTAAATGTTT---------AA----GCCGCCG------------------------------------------------GAGTGCT----GGAAGCTTC--GCCTTGGCTCGAG------CTAGTGCTAAGGAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGCACTCTG-TTG-GC-----A-------------------GCCACTGGTTAACGTTAACG-TTAGCGT------TGTTTTCT---AGCGC-ACACATGACTTGGCATTTCTG--------------GGCTCCGAGC--------------CCCAAGCCCACTTT------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................ACC--CGCTT---GCCG-------A--TCGC---TG..........................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
....................................................................................TACC--CGCTT---GCCG-------A--TCGC---TGT.........................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.....................................................................................................................................................................................................................CT----GGAAGCTTC--GCCTTGGC.....................................................................................................................................................................................................................................1911.00100001000000000000
...................................................................................ATACC--CGCTT---GCCG-------A--TCGC---TGT.........................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
............................................................................A-----CATACC--CGCTT---GCCG-------A--TCGC---TGGTCAG-....................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................GTTTTCT---AGCGC-ACACATGACTTGGCAT...............................................................2811.00100010000000000000
.....................................................................................ACC--CGCTT---GCCG-------A--TCGC---TGGTC.......................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
.....................................................................................................................................................................................................................CT----GGAAGCTTC--GCCTTGG......................................................................................................................................................................................................................................1811.00100001000000000000
......................................................................................CC--CGCTT---GCCG-------A--TCGC---TG..........................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
............................................................CTCGGTCGTTTACCTAA-----C................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
...............................................................................................................................................................................................................................................................................................TGTAATTAGAGCACTCTG-TTG-GC-----A-------------------..................................................................................................................................2411.00110000000000000000
...................................................................................ATACC--CGCTT---GCCG-------A--TCGC---TG..........................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.CG-------CTT------------------------------------------TTCGACTCGGTCGTT.............................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
..........................................................................TAA-----CATACC--CGCTT---GCCG-------A--...................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
.........................................................CGACTCGGTCGTTTACCTAA-----CATACC--C........................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
droSec2
TCG-------CTT------------------------------------------TTCGACTCGGTCGTTTACCTAA-----CTTACC--CGCTT---GCCG-------A--TCGC---TGGTCAG-TTTAAATGTTT---------AA----GCCGCCG------------------------------------------------GAGTGCT----GGAAGCTTC--GCCTTGGCTCGAG------CTAGTGCTAAGGAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGCACTTTG-TTG-GC-----A-------------------GCCACTAGTTAACGTTAACG-TTAGCGT------TGTTTTCT---AGCGC-ACACATGACTTGGCATTTCTG--------------GGCTCCGAGG--------------CCCAAGCCCACTTT------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................CTTACC--CGCTT---GCCG-------A--TCGC---TG..........................................................................................................................................................................................................................................................................................................................................................2211.0010100
....................................................................................TACC--CGCTT---GCCG-------A--TCGC---T...........................................................................................................................................................................................................................................................................................................................................................1911.0010010
............................................................................A-----CTTACC--CGCTT---GCCG-------A--T..................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.................................................................................................................................................................................................................AGTGCT----GGAAGCTTC--GCCT.........................................................................................................................................................................................................................................1911.0010001
...........................................................................AA-----CTTACC--CGCTT---GCCG-------A--TCGC---TGTGG.......................................................................................................................................................................................................................................................................................................................................................2711.0011000
.......................................................................................................................................TTT---------AA----GCCGCCG------------------------------------------------GAGTGCT----GG......................................................................................................................................................................................................................................................2111.0010100
dm3
TCG-------CTT------------------------------------------TTCGACTCGGTCGTTTACCTAC-----CTTACC--CGCTTGCCGTCG-------A--TCGC---TGGTCAG-TTTAAATGTTT---------AA----GCCGCCG------------------------------------------------GAATGCT----GGAAGCTTC--GCCTTGGCTCGAG------CTAGTGCTAAGGAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGCACTTTG-TTG-GC-----A------------------TGCCACTAGTTAACGTTAACG-TTAACGTTAACGCTGTTTTCT---AGCGC-ACACATGACTTGGCATTTCTG--------------GGCTCCGAGC--------------CGCAAGCCCACTTT------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................A----GCCGCCG------------------------------------------------GAATGCT----GGAAGC..................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000002000000000000000000000000
............................................................................................................................................................GCCG------------------------------------------------GAATGCT----GGAAGCTT................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AGATTATATAA-CGTGTAATTAGAGCACT.....................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................CTTACC--CGCTTGCCGTCG-------A--TCGC---T...........................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TAATTAGAGCACTTTG-TTG-GC-----A------------------TGCCAC.............................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TACCTAC-----CTTACC--CGCTTGCCGT...............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GCTTGCCGTCG-------A--TCGC---TGGTCAG-....................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................GGCTCGAG------CTAGTGCTAAGGAGA...........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CTAC-----CTTACC--CGCTTGCCGTC..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........TT------------------------------------------TTCGACTCGGTCGTT.............................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TGCT----GGAAGCTTC--GCCTTGGCTCGAG------C.........................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................GTCG-------A--TCGC---TGGTCAG-TTTAAATGTTT---------................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CGACTCGGTCGTTTACCTAC-----CTT..............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................CTTGGCTCGAG------CTAGTGCTAAG...............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................GCT----GGAAGCTTC--GCCTTGGCTCGAG------C.........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................CGCTTGCCGTCG-------A--TCGC---TGGT........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TTGGCATTTCTG--------------GGCTCCGAG...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTAAATGTTT---------AA----GCCGCCG------------------------------------------------GAATGCT----GG......................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCTG--------------GGCTCCGAGC--------------CGCAAGCCCA..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TGTTT---------AA----GCCGCCG------------------------------------------------GAATGCT----GGAAGC..................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................TGGCTCGAG------CTAGTGCTA.................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................GTAATTAGAGCACTTTG-TT...............................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................C-----CTTACC--CGCTTGCCGTCG-------A--TCGC---TTT.........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TTG-TTG-GC-----A------------------TGCCACTAGTTAACGT...................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................TTTTCT---AGCGC-ACACATGACTTGTA.................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AGAAAATAAAACAGATTATATAA-CGT...................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GTCGTTTACCTAC-----CTTACC--C........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTC--GCCTTGGCTCGAG------CTAG......................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................ATAA-CGTGTAATTAGAGCA.......................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................TACC--CGCTTGCCGTCG-------A--TCGC---T...........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................CGTGTAATTAGAGCACTTTG-T................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AC-----CTTACC--CGCTTGCCGT...............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................GCCG------------------------------------------------GAATGCT----GGAAGCT.................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................AATGCT----GGAAGCTTC--GCCTT........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................TCAG-TTTAAATGTTT---------AA----GCCGCCG------------------------------------------------G..................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................C-----CTTACC--CGCTTGCCGTCG-------......................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TGCT----GGAAGCTTC--GCCTTGGCTCGAG------..........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................TAA-CGTGTAATTAGAGCACTTTG-TTG-GC-----......................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................ACGTTAACGCTGTTTTCT---AGC..................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCG-------CTT------------------------------------------TTCGACTCGGTCGTTTACCTAC-----C................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AGTTAACGTTAACG-TTAAT........................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCG-------CTTTTCGTGTTGCGATTCAATTTGATTGGATCCGATTCGATTCGGTTCGATTGGGTCGTTTACCCAC----------C--T-------GCC------------TGT---TGGTCAG-TTTATAAGTTT--------AAA----GTCGCCG------------------------------------------------TAGTGCT----GGAAGCTTT--GCCTTGGCTCGAG------CTGGTGCTAAGGAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGCACTTTG-CTG-GC-----A-------------------GCCACTGCTTAACG----------------------TTTTCT---ATCGC-AGACATGACTTGGCATTTCTG--------------GGCTC---------------------CAAGCCCACTTT------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................TCGAG------CTGGTGCTAAGGAGAAA.........................................................................................................................................................................................................2211.0010000010
................................................GATTCGGTTCGATTGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCATTTCTG--------------GGCTC---------------------CA................2011.0010000100
..............................................................................................................................................................................................................................................................................AACAGATTATATAA-CGTGTAATTAGAGC........................................................................................................................................................................2811.0010000100
.................................................................................................................................TATAAGTTT--------AAA----GTCGCCG------------------------------------------------TA.................................................................................................................................................................................................................................................................2111.0011000000
............................AATTTGATTGGATCCGATTCGATTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
..................................................................................................................................ATAAGTTT--------AAA----GTCGCCG------------------------------------------------TAGTGCT----GGA.....................................................................................................................................................................................................................................................2811.0010000100
....................................................................................................................................................................................................................GCT----GGAAGCTTT--GCCTTG.......................................................................................................................................................................................................................................1811.0010001000
...................TTGCGATTCAATTTGATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
...............................................................................................................................................................G------------------------------------------------TAGTGCT----GGAAGCTTT--GCCTTGG......................................................................................................................................................................................................................................2411.0010000010
..................................................................................................................................................................................................................................................................................................AATTAGAGCACTTTG-CTG-GC-----A-------------------GC................................................................................................................................2311.0010100000
.................................................ATTCGGTTCGATTGGGTC................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
............................AATTTGATTGGATCCGATTC...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.............................................TTCGATTCGGTTCGATTGGGTC................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.....................................................................TTACCCAC----------C--T-------GCC------------TGT---TGGTC.......................................................................................................................................................................................................................................................................................................................................................2111.0010100000
..................................................................................................................................................AAA----GTCGCCG------------------------------------------------TAGTGCT----GGAA....................................................................................................................................................................................................................................................2111.0010000010
...........................................GATTCGATTCGGTTCGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000100
............................................ATTCGATTCGGTTCGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000010
droYak3
TCG-------CTTTTCGTGTTGCGATTCCATT--------------------TGATTCCATTCGGTCGTTTACCTAC-----C-TGCC--CGCTTGCCGCCG-------A--TCGC---TGGTCAG-TTTAAAAGTTT--------AAA----GCCGCCG------------------------------------------------GATTGCT----GGGAGCTTT--ACCTTGGCTCGAG------CTGGTGCTAAGGAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGCACTTTG-TTG-GC-----A-------------------GCCACTGGTCAACG----------------------TTTTCT---AGCGC-AGACATGACTTGGCATTTCTG--------------GGCTCCAAGC--------------CCCAAGCCCACTTT------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................ATTCCATT--------------------TGATTCCATTCGGTCGTTTAC..........................................................................................................................................................................................................................................................................................................................................................................................................2912.00220000000000
................................................................................................................................................................................................................GATTGCT----GGGAGCTTT--ACCTT........................................................................................................................................................................................................................................2111.00101000000000
................................................................................................................................................................................................................................................................................................GTAATTAGAGCACTTTG-TTG-GC-----......................................................................................................................................................2211.00100100000000
...............................................................................................................................................................................................................................................CGAG------CTGGTGCTAAGGAGA...........................................................................................................................................................................................................1911.00100000010000
............................................................................................................................................................GCCG------------------------------------------------GATTGCT----GGGAGCTT................................................................................................................................................................................................................................................1911.00101000000000
droEug1
GCG-------GTTTTTTCG--------------------------------TCGTTTCGAGTCGGTCGTTTACCTGTTCATGTTTACCGCCGC----TGCCG-------A--TCGCTGTTGGTCAG-TTT----------------AA--------------------------------------------------------------------------AGCTTC--GCCTTGGCTCGAG------CTTGTGCTAAAAAGAAAATAAAACAGATTATATAA-CGTGTAATTAAA-TATTTTG-TTG-CC-----A-------------------ACCACTGGTTAACA----------------------TTTTCT---AGCGC-ATACATGACTTGGCATTTCTG--------------AGGTCTGGGC--------------CCCCAGCCCACTAT------SizeHit CountTotal NormTotal
No Reads
droBia1
TCG--------------------------------------------------------TTTCGGTCGTTTACCTGC-------------CGTTTGCCGCCG-------A--TCGC---TGGTCAG-TTT----------------AAA----GCCACCG------------------------------------------------GGGAGCT----TCAAGCTTC--GCATTGGCTCGCG------CTTGTGCTAAAAAGAAAATAAAACAAATTATATAA-CGTGTAATTAGAGTACTTTG-TTG-CC-----A-------------------GCGACTGGCTAACA----------------------TTTTCT---AGCGC-AGACATGACTTGGCATTTCTTGGGTCTGGGGTCTGGGGTCTGGGC--------------TCC-AGCCCACTTT------SizeHit CountTotal NormTotal
No Reads
droTak1
GCG-------GTTTT-------------------------------------CGTTTCGAGTCGGTCGTTTACCTGC-------------CGCTTACCGCCG-------A--TCGCTGCTGGTCAG-TTTCAA-CTTT--------A--------------------------------------------------------------------------AAGCTTC--GCCTTGGCTCGCG------CTTGTGCTAAAAAGAAAATAAAACAGATTATATAA-CGTGTAATTGGAGTACTTTG-TTG-CC-----A-------------------GCCACTGGCTAACA----------------------TTTTCT---AGCGC-AGACATGACTTGGCATTTCTG--------------GGGTCTGAGC--------------CCC-AGCCCACTTT------SizeHit CountTotal NormTotal
No Reads
droEle1
TTT-------------------------------------------------CGTTTCGAGTCGGTCGTTTACCTGG--------------------CGCCG-------A--TCGC---TGGTCAG-TTT----------------AAA----GCCGCCG------------------------------------------------G--TGCT----GGAAACTTC--GCCTTGGTTCGCG------CTTGTGCTAAAAAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGTACTTTG-TTG-CC-----A-------------------GCCACTGGTTA-CT----------------------TTTTCT---AGCGC-AGACATGACTTAGCATTTCTG--------------GGGTCTGGGA--------------CCC-AGTCCACTTT------SizeHit CountTotal NormTotal
No Reads
droRho1
GCG-------GTTTT-------------------------------------CGTTTCGAGTCGGTCGTTTACCTGC--------------------CGCCA-------A--TCGC---TGGTCAG-TTT----------------AAA----GTCGCCG------------------------------------------------AA--GCT----GGAAGTTTC--GCCTTGGTTCGCG------CTTGTGCTAAAAAGAAAATGAAACAGATTATATAA-CGTGTAATTAGAGTACTTTG-TTG-CC-----A-------------------GCCACCGGTTA-CT----------------------TTTTCT---AGCGC-AGACATGACTTGGCATTTCTG--------------GGGTCTGGGC--------------CCC-AGCCCACTTT------SizeHit CountTotal NormTotal
No Reads
droFic1
TT-----------------------------------------------------TTTGAGTCGGTCGTTTACCTGC----------C--CGC-------CGATCACCGA--TCGC---TGGTCAG-TTT----------------GAA----GCCGCCG------------------------------------------------TA--GCT----GGAAGCTTC--GGCTTGGTTCGCG------TTTGTGCTAAAAAGAAAATAAAACAGATTATATAA-CGTGTAATTAGAGTACTTTG-TTG-CC-----A-------------------GCCACTAGTTAACT----------------------TTTTCT---AGCGC-AGACATGACTTGGCATTTCTG--------------GGGTCTGGGC--------------CCC-AACCCACTTT------SizeHit CountTotal NormTotal
No Reads
droKik1
TC--------------------------------------------------CGATTCGATTCGTTCGTTCACCTGT--------------------TGCCG-------A--TCGC---TGGTCAG-TTTAAAT--TTAAAGTA--AAA----GCCGCTG---TTAC--AGTT-ACT--CTTGTTGTTGGTGTT--GTTG--CTTCTGGA--GCT----GGAAGTTTC--GCCTTGGTTCGCG-----TTTTGTGCTAAAACGAAAACAAAACAGATTATATAA-CGTGTAATTAGAGTACTTTG-TTG-CCTTGCCT----G--TCCAGTGGCTATGCTACTGGTGG-C------GCTTGGCGT--------TTTTCC---AACGC-AGACATGACTTGGCATTTCTG--------------GGGTCTGAGCCTCCCACTCCC---CCC-AGCCCACTTT------SizeHit CountTotal NormTotal
No Reads
droAna3
TCGGAAAACGGTT-T-------------------------------------CGTTACGTTTCGGTCGTTTACCTGC--------------------CTCCGATCGCTGCTGCTGC---TGGTCAG-TTT----TTT---------TAA----GCCGCAT-----AT--GGTTTAATATTT---------TGTT--GTTGCACTTCTGGG--GCACAAAAAAAA-TTCCAGCCTTGGCTCGCG------TCTGTGCTAAAAAGAAAATAAAAGCGATTATATAA-CGTGTAATTAGAGTACTTTTGATAGCG-----AGCCGAGCTTCAGTAGCTTAG---CTGGC---------------------------TTTTCT---AGTGC-AGACATGACTTGGCATTTGTG--------------GGGTCTGGGC--------------CCC-AACCCACTTTCGATTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................AT--GGTTTAATATTT---------TGTT--GT.............................................................................................................................................................................................................................................................................2011.001000100
droBip1
ACG-------GTT-T-------------------------------------CGTTACGTTTCGGTCGTTTACCTGC--------------------CTCCGATCGCTG---CTGC---TGGTCAG-TCT------T---------TAA----GCCGA--------------------------------------------------GTTTGTA----AAAAA-TTCCAGCCTTGGCTCGCG------TTTGTGCTAAAAAGAAAATAAAACCGATTATATAA-CGTGTAATTAGAGTACTTTG-GTAGCC-----A-------------------G------GCGAGC--------------------------TTT---AGTGC-AGACATGACTTGGCATTTGCG--------------GGGTCTGGGC--------------CCC-AACCCACTTT------SizeHit CountTotal NormTotal
No Reads
dp5
GCG-------ATC---------------------------------------TGTTTTGTTTCGGTCGTTTACCTGG--------------------TG-------------GCGC---TGGTCAGCTTT----------------AAAGCTACCCGCCCCTGTCTCTT-------------------------CG----------------------------------GCTCCGATTCGCGCCTCATTTTGTGCTAAAAAGAAAATATAACA-ATTATATAA-CGTGTAATTAGAGTAATTTG-TTG-G--------------------------------------------------------------TTGTCTAGC--CTCAAAACTTGGCTTACCTTTTCTGT-------------GGGTC--AGT--CCCAGTTTCAGTCCC-GTCCCACTTT------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................TCGTTTACCTGG--------------------TG-------------GCGC---TGG.........................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
................................................................GTCGTTTACCTGG--------------------TG-------------GCGC---T...........................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
............................................................TTCGGTCGTTTACCTGG--------------------TG-------------GC.................................................................................................................................................................................................................................................................................................................................................................2112.0020100001000
..................................................................CGTTTACCTGG--------------------TG-------------GCGC---TGGTCAG.....................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
............................................................................................................................................................................................................................................................GTGCTAAAAAGAAAATATAACA-A...............................................................................................................................................................................................2311.0010010000000
................................................................................................................................................................CTGTCTCTT-------------------------CG----------------------------------GCTCCGATTCGC.................................................................................................................................................................................................................................2311.0010010000000
...............................................................................................................................................................CCTGTCTCTT-------------------------CG----------------------------------GCTCCGATT....................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................CAGCTTT----------------AAAGCTACCCGCC....................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................TTGTCTAGC--CTCAAAACTTGG.......................................................................2111.0010100000000
.....................................................GTTTTGTTTCGGTCGTTTACCTGG--------------------T.................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
...............................................................GGTCGTTTACCTGG--------------------TG-------------GCGC---T...........................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................CGGTCGTTTACCTGG--------------------TG-------------G..................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...............................................................GGTCGTTTACCTGG--------------------TG-------------GCG................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
GCG-------ATC---------------------------------------TGTTTTGTTTCGGTCGTTTACCTGG--------------------TG-------------GCGC---TGGTCAGCTTT----------------AAAGCTACCCGCCCCTGTCTCTT-------------------------CG----------------------------------GCTCCGATTCGCGCCTCATTTTGTGCTAAAAAGAAAATATAACA-ATTATATAA-CGTGTAATTAGAGTAATTTG-TTG-G--------------------------------------------------------------TTGTCTAGC--CTCAAAACTTGGCTTACCATTTCTGT-------------GGGTC--AGT--CCCAGTTTCAGTCCC-GTCCCACTTT------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..G-------ATC---------------------------------------TGTTTTGTTTCGGTC................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
...............................................................................................................................................................CCTGTCTCTT-------------------------CG----------------------------------GCTCCGATT....................................................................................................................................................................................................................................2111.001000100
................................................................GTCGTTTACCTGG--------------------TG-------------GCGC---TG..........................................................................................................................................................................................................................................................................................................................................................2111.001000010
droWil2
TCA-------GTT------------------------------------------TTTTTTTCGGTCGTTTACCTGGTCAAGCT----------TTTTGGCA-------A--G--CTGTTGGTGTG-TGTGTGAGTGT------ATGTA----T----------------------------------------TAGCTC--------CA--TTT----CGAAGTTTC--G----------CGG-----CTTGTGCTAAAATAATAATC---AATATTATATAATCGTGTAATTAGTGTGCGTTT-GTG---------------------------------TGATTATTT----------------------TTTTCT---AGCTAAATACATGACTTGGCATTTCTT--------------GGCATC-AGC-----AAGCCA---TCT-AACCCACTTT------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................TTACCTGGTCAAGCT----------TTTTGG...............................................................................................................................................................................................................................................................................................................................................................................2112.00200002
......................................................................................................................................................................................................TC--------CA--TTT----CGAAGTTTC--G----------CGG-----CT........................................................................................................................................................................................................................2211.00110000
................................................................................................................G--CTGTTGGTGTG-TGTGTGAGT...........................................................................................................................................................................................................................................................................................................................................2111.00100100
...............................................................................................TTTGGCA-------A--G--CTGTTGGTG.......................................................................................................................................................................................................................................................................................................................................................1811.00100010
......................................................................................................................................................................................................................T----CGAAGTTTC--G----------CGG-----CTTGTGCTAAA...............................................................................................................................................................................................................2511.00100100
...................................................................................................................CTGTTGGTGTG-TGTGTGAG............................................................................................................................................................................................................................................................................................................................................1911.00100100
......................................................................................................................................................................................................TC--------CA--TTT----CGAAGTTTC--G----------CGG-----CC........................................................................................................................................................................................................................2211.00110000
..................................................................CGTTTACCTGGTCAAGCT----------TTTTGGCA-------......................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.....................................................................................................A-------A--G--CTGTTGGTGTG-TGTGTG..............................................................................................................................................................................................................................................................................................................................................2011.00100100
....................................................................................................................................................................................................................TTT----CGAAGTTTC--G----------CGG-----CTT.......................................................................................................................................................................................................................1911.00100010
................................................................................................TTGGCA-------A--G--CTGTTGGTGTG-TG..................................................................................................................................................................................................................................................................................................................................................2111.00100001
....................................................................................................................................................................................................................TTT----CGAAGTTTC--G----------CGG-----CG........................................................................................................................................................................................................................1811.00110000
..........GTT------------------------------------------TTTTTTTCGGTCGTTTACCTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.....................................................................................................................................................................................................CTC--------CA--TTT----CGAAGTTTC--G----------C.................................................................................................................................................................................................................................1911.00110000
....................................................................................................CA-------A--G--CTGTTGGTGTG-TGT.................................................................................................................................................................................................................................................................................................................................................1811.00100010
...............................................................................................TTTGGCA-------A--G--CTGTTGGTGTG-TGT.................................................................................................................................................................................................................................................................................................................................................2311.00101000
.................................................................................................................................................................................................................A--TTT----CGAAGTTTC--G----------CGG-----CTT.......................................................................................................................................................................................................................2011.00110000
.......................................................TTTTTTTCGGTCGTTTACCTGGTCA...................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
...................................................................................................................CTGTTGGTGTG-TGTGTGA.............................................................................................................................................................................................................................................................................................................................................1820.50100100
droVir3
TGT-------ATT------------------------------------------TCTGTGCCGCGTATTCACTCTCTCATACT----------CTCTGTCG-------G--TCGT---TGGCTTT-GCT------T---------GAA----GCTC---------------------------------------------------GG--GCT----TAAAGTTTC--G--------------------TGTGCTT-------AATACGCCATCTTATATAA-CATGTAATTAGATGACTTTT-TTG-TT-----A-------------------A------ATTG--C----------------------TTTTCC---AGCTT-A-ACGTGACCTGGCATTTC------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................CTCTGTCG-------G--TCGT---TGGCTTT-GCT------T---------.................................................................................................................................................................................................................................................................................................................................2412.002020000000000000000000000000000000000000000000000000000000000000
.............................................................................TCATACT----------CTCTGTCG-------G--TCGT---T...........................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................................TTCACTCTCTCATACT----------CTCT.................................................................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GCT------T---------GAA----GCTC---------------------------------------------------GG--GCT----TAAA....................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TT-------AATACGCCATCTTATATAA-......................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................C----------------------TTTTCC---AGCTT-A-ACGTGACC.....................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
................................................................................TACT----------CTCTGTCG-------G--TCGT---TGGCTT......................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................A----GCTC---------------------------------------------------GG--GCT----TAAAGTTTC--G--------------------T.......................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
.................................................................GTATTCACTCTCTCATACT----------CTCT.................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.GT-------ATT------------------------------------------TCTGTGCCGCGTATTC............................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................CTCATACT----------CTCTGTCG-------G--T..................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................A----GCTC---------------------------------------------------GG--GCT----TAAAGTTTC--G--------------------TGTGC...................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................................................................TTCACTCTCTCATACT----------CTCTGTC..............................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................T---------GAA----GCTC---------------------------------------------------GG--GCT----TAAAGTTTC--G--------------------TGTGC...................................................................................................................................................................................................................2811.001000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................TT-GCT------T---------GAA----GCTC---------------------------------------------------GG--GCT----TAAAGTT.................................................................................................................................................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
............................................................................CTCATACT----------CTCTGTCG-------G--TCGT---............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................CGT---TGGCTTT-GCT------T---------GAA----A.........................................................................................................................................................................................................................................................................................................................1820.501000000000000000001000000000000000000000000000000000000000000000
droGri2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATAA-CATGTAATTAGAGGACTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:29 AM