ID:

dsi_17688

 Coordinate:

3r:23192515-23192664 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CCCAAGCTCCGAGCTGAGATCCCAGTGCAGGTGGCCAGGTGCGCAGGCAGAACTTGGAAGCCATTTAGTATTTCATATTCAGGGATTTGGGGATTCCGGCGGCGCATCAAAGCGAACTTGCCTTTTGATGTAAATGTGTAAATGCGCACAGGAAGATTCCACGAAGGCATTTTTTTCAACGCTCACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTACAACGTGCAGAGC
**************************************************.....((((.((..((((.(((((.......))))))))))).))))((((..(((((((((((....)))..))))))))...(((((......)))))(((((((.((.....)).)))))))....)))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 M025
embryo
 M053
female body
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
..................................................................................................................................................................................................................CATGAAGGAGGTGGACACGC.................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................GACACGCAGATGTACAACGTGCAGAGC 27 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CATGAAGGAGGTGGACAC...................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GGAGGTGGACACGCAGATGTACAAC......... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................ATGAAGGAGGTGGACACGCA................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0
................................................................TTCGTATTTCATAGTCAGAG...................................................................................................................................................................... 20 3 10 0.60 6 0 0 0 0 2 4 0 0
................................................................TTCGTATTTCATAGTCAG........................................................................................................................................................................ 18 2 5 0.40 2 0 0 0 0 0 1 1 0
.....................................................................................................................................................................................................................................TAGATGTACAACGTG...... 15 1 4 0.25 1 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................CGCAATGATTAACAGGA................................................ 17 2 7 0.14 1 0 0 0 0 1 0 0 0
..................................................................AGTATTTCATTTTCAGTGA..................................................................................................................................................................... 19 2 7 0.14 1 1 0 0 0 0 0 0 0
.....................................................................................................................TTGACTGTTGATGTAAAT................................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 0 1 0
............................................................................................................................................................GTTCACGAAGGGATTTTTTT.......................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 1
................................................................TTCGTATTTCATATTCAGA....................................................................................................................................................................... 19 2 11 0.09 1 0 0 0 0 1 0 0 0
.........................................CGGAGGCAGTACTTGGA................................................................................................................................................................................................ 17 2 12 0.08 1 0 0 0 0 0 0 1 0
........................................GCGGAGTCAGAACTTGGAT............................................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................CGATAATTAACGGGACTCA............................................ 19 3 16 0.06 1 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................ACAGGAGCTGTGTCCATGA................................... 19 3 17 0.06 1 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................CTTGAAGGAGGTGGA......................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0
.................................................................TCGTATTTCATAGTCAGGT...................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0

Anti-sense strand reads

GGGTTCGAGGCTCGACTCTAGGGTCACGTCCACCGGTCCACGCGTCCGTCTTGAACCTTCGGTAAATCATAAAGTATAAGTCCCTAAACCCCTAAGGCCGCCGCGTAGTTTCGCTTGAACGGAAAACTACATTTACACATTTACGCGTGTCCTTCTAAGGTGCTTCCGTAAAAAAAGTTGCGAGTGAGTTATTAATTGTCCTGGGTACAGGTACTTCCTCCACCTGTGCGTCTACATGTTGCACGTCTCG
**************************************************.....((((.((..((((.(((((.......))))))))))).))))((((..(((((((((((....)))..))))))))...(((((......)))))(((((((.((.....)).)))))))....)))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
..................................................................................................................................................................................................ATAGTCCTGTGTACAGGTTCTT.................................. 22 3 1 1.00 1 0 0 1 0 0 0 0
...............................................................................................................................................................................AGTTGCGAGTGAGTTATTAAT...................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................................................................GTAGAAAAAGATGCTAGTGAGT............................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................................................AAAAAAAGTTGCGAAGGAATT............................................................ 21 3 17 0.29 5 2 2 0 1 0 0 0
................TCTAGGATCACGTCCAA......................................................................................................................................................................................................................... 17 2 6 0.17 1 0 0 0 1 0 0 0
....................................................................................................................GGACGGAAAACTACATGT.................................................................................................................... 18 2 6 0.17 1 0 0 0 0 1 0 0
..............ACTCTAGTGTCACGT............................................................................................................................................................................................................................. 15 1 10 0.10 1 1 0 0 0 0 0 0
......................................................................................................GCGCCGTTTCGCTTGAA................................................................................................................................... 17 2 19 0.05 1 0 0 0 0 0 1 0
.........................................................................................................TAGTTTCGCCTGAATCGAA.............................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 1
................TCTCGTGTCACGTCCA.......................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0
.........................................................................................................................................................................AAAAAAAATTGCGAGTGT............................................................... 18 2 20 0.05 1 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:23192465-23192714 - dsi_17688 CCC-------A-----------AGCTCCGA---------------------------GC-TGAG--------------------------------------------------------------------ATC------CCA-------GTGC--------------AGGT----GGCCAGGTGCGCA-GGCAGAACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGG-------------CGGCGCATCAAAGC----GAACTTGCCTTTTGATGTAA-A----TGTGTAAATG----------CGCACAGGAA-----------GA------------------TT-CC--------------------------A-------------------CGAA-GGCA---T---------------------------------------------------------------------------TTTT--T--T--CAA---CGC--TCACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTACAACGTGCAGAGC
droSec2 scaffold_22:415826-416075 - CCC-------A-----------AGCTCCGA---------------------------GC-TGAG--------------------------------------------------------------------ATC------CCA-------GTGC--------------AGGT----GGCCAGGTGCGCA-GGCAGAACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGG-------------CGGCGCATCAAAGC----GAACTTGCCTTTTGATGTAA-A----TGTGTAAATG----------CGCACAGGAA-----------GA------------------TT-CC--------------------------A-------------------CGAA-GGCA---T---------------------------------------------------------------------------TTTT--T--T--GAA---CGC--TCACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTACAACGTGCAGAGC
dm3 chr3R:23793264-23793519 - CCC-------A-----------AGCTCCGA---------------------------GC-TGAG--------------------------------------------------------------------ATC------CCA-------GTGC--------------AGGTGCCCGGCCAGGTGCGCA-GGCAGAACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGC-------------CGGCGCATCAAAGC----GAACTTGTCTTTTGATGTAA-A----TGTTTAAATG----------CGCACAGGAA-----------GA------------------TT-GT--------------------------------------------A-CGAA-GGCA---A---------------------------------------------------------------------------TTTTGTT--T--CAA---CGC--TCTCTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTACAACGTGCAGAGC
droEre2 scaffold_4820:4251680-4251929 + CCC-------A-----------A-CACCGA---------------------------GA-TGAG--------------------------------------------------------------------ATC------CCA-------GTGC--------------AGGT----GGCCAGGTGCGCA-GGCAGGACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGC-------------CGGCGCATCAAAGC----GAACTTGCCTTTTGATGTAA-A------------TG----------CGCACAGGAA-----------GG------------------AA-CT--------------------------GTCGCTC-----GC----C-CGAA-GGCA---T------------C--------------------------------------------------------------T-TT--T--T--TAA---CGC--TTGCTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACCCAGATGTACAACGTGCAGAGC
droYak3 3R:22706615-22706882 + CCC-------C-----------AACACCGA---------------------------GA-TGAG--------------------------------------------------------------------ATC------CCA-------GTGC--------------AGGT----GGCCAGGTGCGCA-GTCAGGACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGCCGAT-----TCCGGGGCGCATCAAAGC----GAACTTGCCTTTTGATGTAA-A------------TG----------CGCACCGGAA-----------GA------------------AT-CC--------------------------GTCGCTCCTCGCAT----CTCGAA-GGCA---T------------C--------------------------------------------------------------T-TT--TT-TAACAA---CGC--TTACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACCCAGATGTACAACGTGCAGAGC
droEug1 scf7180000409787:1816346-1816590 + CCC-------A------------TCTCCGA-------------------------------GAG--------------------------------------------------------------------TTC------CCA-------GCCC--------------AGGT----GCCAAGGTGCACA-GCCAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGC-------------CTGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------CG----------CGCACAGGAA-----------GA------------------TT-CC--------------------------GGCTCTC-----GC----C-TGAA-GATA---T-----------------------------------------------------------------------------TT--T--T--TAA---CGC--TCACTTAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACCCAGATGCTCAATGTGCAGAGC
droBia1 scf7180000302075:3024595-3024859 + CCCATTTCCC-ACTCCATCCCCATCTCCGG-------------------------------GAG--------------------------------------------------------------------ATC------CCA-------GCCC--------------AGGTGG-TGGCAAGGTGCACGGGCCAGGACTT---AGAAGCCGTGTTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGC-------------CGACGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------TG----------CGCACAGGAA-----------GT------------------TTTCC--------------------------GGCA-----------------------CA---C------------T--------------------------------------------------------------T-TTTTT--T-ACAA---CGTTCTTACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACGCAGATGCTGAATGTGCAGAGC
droTak1 scf7180000414170:17402-17643 - CCCAT--TC-CA-----TTTCCATCT----------------------------------CGAG--------------------------------------------------------------------ATC------CCA-------GCCC--------------AGGT----GCACAGGCACAGT-TACAGGACTT---GGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGGGGATTCCGC-------------CGACGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------TG----------CGCACAGGAA-----------GT------------------T---------------------------------------------------GAT-G------------------TTT-------------------------------------------------------------T-TT--T--T--TAA---CGCTCTCACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTTCAATGTGCAGAGC
droEle1 scf7180000491280:4237489-4237728 + CA---------------------TCTG-------------------------------GTGGGG--------------------------------------------------------------------CTT------CCA-------AGCCAGGTGAGGTGCTCCA-----------------GGA-GCCAAAACTTGGTGGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGC-------------TTGCGCATCAAACG---GAAACTTGTCTTTTGATGTAA-A------------TGCGG-------GCCACAGCAA-----------A------------------------------------------------------------------------AG-GGCA---C------------TT-------------------------------------------------------------T-TT-TT--T--AAA---GGTTTTCACTCAATAATTCACAGGTCCAATGTCCATGAAGGAGGTGGACACCCAGATGCTCAACGTGCAGAGC
droRho1 scf7180000779538:470975-471217 + CCG-------------------------------------------------------C-GGAA--------------------------------------------------------------------ATC------CCA-------GGCC--------------AGGT----GGCAAGGTGCGCCAGCCAGGACTT---AGAAACCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGC-------------TGGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------TG----------CGCTCAAGAA-----------GT------------------TT-CC--------------------------GGCGCTC-----GC----C-CTAA-GGCA---C------------T--------------------------------------------------------------T-TT--TT-T--AAA---GGT--TCGCTCAATAATTAACAGGTCCAATGTCCATGAAGGAGGTGGACACCCAGATGCTAAACGTGCAGAGC
droFic1 scf7180000453826:144171-144414 + CTC-------G--------------------------------------------------GAA--------------------------------------------------------------------ATC------CCA-------TCGC--------------AGGT----GGCAAGGTGCGCG-GCCAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTGCGC-------------TGGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------TGCG--------AGCACCGGAA-----------GT------------------TT-CC--------------------------TGCTC-C-----GA----C-TAGA-GGCA---T---------------------------------------------------------------------------TTTT--T--TA-ACA---CGCCCCCACTCAATAATTAACAGGACCAATGTCCATGAAGGAGGTGGACACCCAGATGCTCAACGTGCAGAGC
droKik1 scf7180000302475:1030181-1030423 + TCC-------G-----------GGAACGGG---------------------------AA-CGGG--------------------------------------------------------------------AAC------GCA-------GCCC--------------AGGT----GGCAAGGTGCGCT-GCCAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TTGGGATT--------------------CGCATCAAAGC----GAACTTGGCTTTTGATGTAC-A--------TAAATG----------CGC--AGGAA-----------GT------------------TT-CC--------------------------GCCGC-------GC----C-CAAA-GGCA---T---------------------------------------------------------------------------TTTT--T--T---CA---CGC--TCACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACCCAGATGCTCAACGTGCAGAGC
droAna3 scaffold_13340:21931195-21931470 - CCA-T--ACCA------------ACTCCG---------CTTTACTT-CGCAATCGCTGT-----------------------------------------------------------------------------------TG-------GCCC--------------AGGT----GGCAAGGTGCGCT-GCGAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGGGGATTCTGC-------------TGGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------TA----------CGC--AGAAA-----------GT------------------TT-CC--------------------------GGCCCCT-----AC----C-TGGA-GGCA---TT-----TGTTTTTT-------------------------------------------------------------T-TT--TT-TAACGCTAACGC--TTACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACCCAGATGCTTAACGTGCAGAGC
droBip1 scf7180000396583:256309-256578 + CCA-T--ACC-A------------CTCCG---------CCCTACTC-CGCAATCGCTGT-----------------------------------------------------------------------------------TG-------GCCC--------------AGGT----GGCAAGGTGCGCT-GCGAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGGGGATTCGGC-------------TGGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------TA----------CGC--TGAAA-----------GT------------------TT-CC--------------------------GGCCCGG-----GT----C-TCGA-GGCA---TT----------CTT-------------------------------------------------------------T-TT--TT-TAACGCTAACGC--TTACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACCCAGATGCTTAACGTGCAGAGC
dp5 2:8296181-8296494 + CCT-------A------------T----------------------CCG--------CC-----TGAGCG--CCTCCGC---------------------------------------------------CA-ACTCC----GACTCC---GACC--------------AGGT----GGCAAAGTGCGCT-GTTGGGGCTT---AGAATCCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTTGCT---------TTTGGGACGCATCAAAGC----CAACTTGTCTTTTGATGTAA-A------------TGCGGGACAATGCGGGAGGGAG-CACTGCACTG--TTTT------GGTAGAGATA-CTGAGGCG--ATGGG------ATTTTTTACCCC--------CGATAC---CA-ATCA---TT----------TTT--G----------------------------------------------------------T-TT--T-------T---TGTTGTTGTTC---AATTAACAGGTCCTATGTCCATGAAGGAGGTGGACACCCAAATGCTCAATGTGCAGGCG
droPer2 scaffold_0:2131987-2132291 + CCTGT--CC-CT----------AT----------------------CCG--------CC-----TGAGAG--CCTCCGC---------------------------------------------------CA-ACTCC----GACTCC---GACC--------------AGGT----GGCAAAGTGCGCT-GTTGGGGCTT---AGAATCCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTTGCT---------TTTGGGACGCATCAAAGC----CAACTTGTCTTTTGATGTAA-A------------TG----------CGGGAGGGGAGCACTGCACTG--TTTT------GGTGGAGATA-CTGAGGCG--ATGGG------ATTT-TTACCCC--------CGATAC---CA-ATCG---TT-----------TT-------------------------------------------------------------T-TT--T--T--TGT---TG------TTC---AATTAACAGGTCCAATGTCCATGAAGGAGGTGGACACCCAAATGCTCAATGTGCAGGCG
droWil2 scf2_1100000004921:990262-990554 - dwi_2971 CTA-----------------------------------------------------------AA--------------------------------------------------------------------AGC------CGA-------CTCC--------------AGGT----GGCAAAGTGCGCTTGTTTGGGCTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGGGGATTGGGG--ATTTCTGTT--TGGCTCATCAAAGT----CAACTTGCCTTTTGATGTAT-A------------TA----------AATACAAT-A-----------GCTTCTGGGGTGGATGGAGACT-CTAAGAAAGCATAAGCAAAACATTTCT-TCCTT-------CCGTAAA---AAAAAAA---T------------CT-------------------------------------------------------------GTTT--T-----TCT---TGT--CTCTGCCATAATTAACAGGACCCATGTCCATGAAGGAAGTGGACACACAAATGCTCAATGTCCAGAGC
droVir3 scaffold_13047:15794249-15794528 + dvi_17061 CGCAG--CC-CG-----------C----------------------CCA--------CC-----TAAAGG--CAGGCAT---------------------------------------------------CG-GCACAGGA----ATAGGTGGCC--------------AGGT----GGCCAAGTGAGCT-GGCAGGGCTT---AGAAGACG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCAGT-------------TGACGCTTCAAAGC----CAGCTACGCTTTTGATGTAA-AAGAAAGTGAAAATG----------CGGA-----A-----------AA------------------TG-CC--------------------------GTTGC-------CA-------G-----C-------------------------------------------------------------------AAAGTTCAAG---T-AT--TTTT-ACAC---TGC--ACTCTTAATAATTAACAGGACCCATGTCTATGAAGGAGGTGGACACACAAATGCTCAACGTGCAGAGT
droMoj3 scaffold_6540:19305339-19305682 + CCC-------C-----------GTCTCCGGCGCACCCACTAGACTTACG--------CC-----TAAGAGCGCCGGCATCGACACAAGCAGAAGCTGAATGAGAAGTAGCAGCAGCAGGAGCGGTAGGAGC-AGCACAAGCATA-------GCCC--------------AGGT----GGCCAAGTGCGCT-GTCAGGGCTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTTACT-------------TGACGCATCAAAGC----CATCTTGGCTTTTGATGTGA-A------------AG----------AAAGCGGAAA-----------AA------------------TG-CT--------------------------GCCAC-------C--------AGA-AGC-------------------------------------------------------------------AGAGTTCAAG---T-AT--TTTT-ACGC---TGC--ACTCTTAATAATTAACAGGCCCCATGTCCATGAAGGAGGTGGACACACAGATGTTCAACGTGCAGAGC
droGri2 scaffold_14830:4219629-4219955 - CCC-------A-----------AAAACACA---------------------------GA-CACA--------------------------------------------------------------------AACACAGCC----ATG---GCCC--------------AGGT----GGCCAAGTGCGCT-GGCAGGGCTT---AGAAGGCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTTCAC---------T---TGACGCATCAAAGCCCAACAACTTGGCTTTTGATGTGAGA------------AG----------CG---AGAAA-----------G-------------------------------CGGAA--------------------------------A---TA-AAAACTAATGCTGCTGATGCCTTTTTTTGTTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTATAAGTAGAGTAAAAGTATTTAT--A--T--ATG---TGC--ACTTTTAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACACAGATGCTCAACGTGCAGAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCC-------A-----------AGCTCCGA---------------------------GC-TGAG--------------------------------------------------------------------ATC------CCA-------GTGC--------------AGGT----GGCCAGGTGCGCA-GGCAGAACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGG-------------CGGCGCATCAAAGC----GAACTTGCCTTTTGATGTAA-A----TGTGTAAATG----------CGCACAGGAA-----------GA------------------TT-CC--------------------------A-------------------CGAA-GGCA---T---------------------------------------------------------------------------TTTT--T--T--CAA---CGC--TCACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTACAACGTGCAGAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACGC....................2011.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACGCAGATGTACAACGTGCAGAGC2711.00100000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACAC......................1811.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGGACACGCAGATGTACAAC.........2511.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGCA...................2011.00100010000000000000
droSec2
CCC-------A-----------AGCTCCGA---------------------------GC-TGAG--------------------------------------------------------------------ATC------CCA-------GTGC--------------AGGT----GGCCAGGTGCGCA-GGCAGAACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGG-------------CGGCGCATCAAAGC----GAACTTGCCTTTTGATGTAA-A----TGTGTAAATG----------CGCACAGGAA-----------GA------------------TT-CC--------------------------A-------------------CGAA-GGCA---T---------------------------------------------------------------------------TTTT--T--T--GAA---CGC--TCACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTACAACGTGCAGAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACGCAGATGTACAACGTGCAGAGC2712.0020020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGCAG..................2112.0021100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCATGTCCATGAAGGAGGT............................2111.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCAGATGTACAACGTGCAGAGC2511.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGCA...................2011.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGCAGAT................2311.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGC....................1911.0011000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCAGATGTACAACGT.......1811.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAG..............................1811.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGGTGGACACGCAGATG...............2311.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACG.....................1811.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATGTACAACGTGCAGAGC2211.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTGGA.........................2040.5020020
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAGGTGGA.........................2140.2510010
dm3
CCC-------A-----------AGCTCCGA---------------------------GC-TGAG--------------------------------------------------------------------ATC------CCA-------GTGC--------------AGGTGCCCGGCCAGGTGCGCA-GGCAGAACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGC-------------CGGCGCATCAAAGC----GAACTTGTCTTTTGATGTAA-A----TGTTTAAATG----------CGCACAGGAA-----------GA------------------TT-GT--------------------------------------------A-CGAA-GGCA---A---------------------------------------------------------------------------TTTTGTT--T--CAA---CGC--TCTCTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTACAACGTGCAGAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCAGATGTACAACGTGCA....2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAGGT............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGCAGAT................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGTGGACACGCAGA.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACGC....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTGGA.........................2031.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCATGAAGGAGGTGGA.........................1931.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000010000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAGGTGG..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AA-A----TGTTTAAATG----------CGCACAGG.......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAGGTG...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCCATGAAGGAGGTG...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCAGATGTACAACGT.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................CTCCGA---------------------------GC-TGAG--------------------------------------------------------------------ATC------CCA-------GTGC--------------AGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGCAGATGTACAACGTGC.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GTTTAAATG----------CGCACAGGAA-----------GA------------------TT-GT--------------------------------------------A-...................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGACCCATGTCCATGAAGGAGGT............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAGGTG...........................2311.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTGGACA.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGACACGCAGATGTA.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGCAGA.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGAAGGAGGTGGACA.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AATG----------CGCACAGGAA-----------GA------------------TT-G..................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................ATATTCAGGGATT-TGGGGATT................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTACAACGTGCAGAGC1911.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGATGTACAACGTGCAGAG.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGGTGGACACGC....................1811.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AATG----------CGCACAGGAA-----------GA------------------TT-GT--------------------------------------------A-CG.................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTACAACGTGCAGAGG1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGACACGCAGATGTACAACGTG......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACGC....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGTGGACACGCAGC.................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCATGAAGGAGGTGG..........................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTG...........................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATGTACAACGTGA.....1730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAGGTGGAC........................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCC-------A-----------A-CACCGA---------------------------GA-TGAG--------------------------------------------------------------------ATC------CCA-------GTGC--------------AGGT----GGCCAGGTGCGCA-GGCAGGACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGC-------------CGGCGCATCAAAGC----GAACTTGCCTTTTGATGTAA-A------------TG----------CGCACAGGAA-----------GG------------------AA-CT--------------------------GTCGCTC-----GC----C-CGAA-GGCA---T------------C--------------------------------------------------------------T-TT--T--T--TAA---CGC--TTGCTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACCCAGATGTACAACGTGCAGAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAGGT............................2215.0051001300
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCAGA.................2211.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACCCAGATGTACAACGTGCAGAGC2711.0010000100
...............................................................................................................................................................................................................................................TGGGGATTCCGC-------------CGGCGCATCAAA...................................................................................................................................................................................................................................................................................................................................2411.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCATGTCCATGAAGGAGGTG...........................2211.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAGATGTACAACGTGCAGA..2211.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGACACCCAGATG...............1811.0011000000
...........................................................................................................................................................................................GCA-GGCAGGACTT---GGAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAGGT............................2011.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCC....................1911.0010000100
..................................................................................................................................................................................GCCAGGTGCGCA-GGCAGGACTT---GGA........................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACCCAGAT................2411.0010001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAGGTGGA.........................2130.6720001010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTGGA.........................2030.6720001010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAGGT............................1840.5020001100
droYak3
CCC-------C-----------AACACCGA---------------------------GA-TGAG--------------------------------------------------------------------ATC------CCA-------GTGC--------------AGGT----GGCCAGGTGCGCA-GTCAGGACTT---GGAAGCCA--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGCCGAT-----TCCGGGGCGCATCAAAGC----GAACTTGCCTTTTGATGTAA-A------------TG----------CGCACCGGAA-----------GA------------------AT-CC--------------------------GTCGCTCCTCGCAT----CTCGAA-GGCA---T------------C--------------------------------------------------------------T-TT--TT-TAACAA---CGC--TTACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACCCAGATGTACAACGTGCAGAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAGGT............................2214.00401000030000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACCCAGAT................2412.00200000020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCAGAT................2312.00201100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAGATGTACAACGTGCAGAGC2512.00200000020000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACCCAGA.................2311.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCA...................2011.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAGGT............................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACACCCAGATGTACAACGTGCAGA..2611.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAGGTGGAC........................2611.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGGACACCCAGAT................1811.00101000000000
..........................................................................................................................................................................................................................................................................................................GTAA-A------------TG----------CGCACCGGAA-----------GA------------------AT-CC--------------------------.......................................................................................................................................................................................................2311.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCAGA.................2211.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAGATGTACAACGTGCAGAG.2311.00100000010000
.......................................................................................................................................................................................................................................................................................................GATGTAA-A------------TG----------CGCACCGGA......................................................................................................................................................................................................................................................................1911.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACACCCAGATGTACAACGTGCAGAGC2811.00100000010000
..............................................................................................................................................CA-------GTGC--------------AGGT----GGCCAGGTGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAGGTGGA.........................2130.67200000020000
droEug1
CCC-------A------------TCTCCGA-------------------------------GAG--------------------------------------------------------------------TTC------CCA-------GCCC--------------AGGT----GCCAAGGTGCACA-GCCAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGC-------------CTGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------CG----------CGCACAGGAA-----------GA------------------TT-CC--------------------------GGCTCTC-----GC----C-TGAA-GATA---T-----------------------------------------------------------------------------TT--T--T--TAA---CGC--TCACTTAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACCCAGATGCTCAATGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droBia1
CCCATTTCCC-ACTCCATCCCCATCTCCGG-------------------------------GAG--------------------------------------------------------------------ATC------CCA-------GCCC--------------AGGTGG-TGGCAAGGTGCACGGGCCAGGACTT---AGAAGCCGTGTTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGC-------------CGACGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------TG----------CGCACAGGAA-----------GT------------------TTTCC--------------------------GGCA-----------------------CA---C------------T--------------------------------------------------------------T-TTTTT--T-ACAA---CGTTCTTACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACGCAGATGCTGAATGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droTak1
CCCAT--TC-CA-----TTTCCATCT----------------------------------CGAG--------------------------------------------------------------------ATC------CCA-------GCCC--------------AGGT----GCACAGGCACAGT-TACAGGACTT---GGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGGGGATTCCGC-------------CGACGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------TG----------CGCACAGGAA-----------GT------------------T---------------------------------------------------GAT-G------------------TTT-------------------------------------------------------------T-TT--T--T--TAA---CGCTCTCACTCAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACGCAGATGTTCAATGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droEle1
CA---------------------TCTG-------------------------------GTGGGG--------------------------------------------------------------------CTT------CCA-------AGCCAGGTGAGGTGCTCCA-----------------GGA-GCCAAAACTTGGTGGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGC-------------TTGCGCATCAAACG---GAAACTTGTCTTTTGATGTAA-A------------TGCGG-------GCCACAGCAA-----------A------------------------------------------------------------------------AG-GGCA---C------------TT-------------------------------------------------------------T-TT-TT--T--AAA---GGTTTTCACTCAATAATTCACAGGTCCAATGTCCATGAAGGAGGTGGACACCCAGATGCTCAACGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droRho1
CCG-------------------------------------------------------C-GGAA--------------------------------------------------------------------ATC------CCA-------GGCC--------------AGGT----GGCAAGGTGCGCCAGCCAGGACTT---AGAAACCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCCGC-------------TGGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------TG----------CGCTCAAGAA-----------GT------------------TT-CC--------------------------GGCGCTC-----GC----C-CTAA-GGCA---C------------T--------------------------------------------------------------T-TT--TT-T--AAA---GGT--TCGCTCAATAATTAACAGGTCCAATGTCCATGAAGGAGGTGGACACCCAGATGCTAAACGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droFic1
CTC-------G--------------------------------------------------GAA--------------------------------------------------------------------ATC------CCA-------TCGC--------------AGGT----GGCAAGGTGCGCG-GCCAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTGCGC-------------TGGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------TGCG--------AGCACCGGAA-----------GT------------------TT-CC--------------------------TGCTC-C-----GA----C-TAGA-GGCA---T---------------------------------------------------------------------------TTTT--T--TA-ACA---CGCCCCCACTCAATAATTAACAGGACCAATGTCCATGAAGGAGGTGGACACCCAGATGCTCAACGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droKik1
TCC-------G-----------GGAACGGG---------------------------AA-CGGG--------------------------------------------------------------------AAC------GCA-------GCCC--------------AGGT----GGCAAGGTGCGCT-GCCAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TTGGGATT--------------------CGCATCAAAGC----GAACTTGGCTTTTGATGTAC-A--------TAAATG----------CGC--AGGAA-----------GT------------------TT-CC--------------------------GCCGC-------GC----C-CAAA-GGCA---T---------------------------------------------------------------------------TTTT--T--T---CA---CGC--TCACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACCCAGATGCTCAACGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
droAna3
CCA-T--ACCA------------ACTCCG---------CTTTACTT-CGCAATCGCTGT-----------------------------------------------------------------------------------TG-------GCCC--------------AGGT----GGCAAGGTGCGCT-GCGAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGGGGATTCTGC-------------TGGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------TA----------CGC--AGAAA-----------GT------------------TT-CC--------------------------GGCCCCT-----AC----C-TGGA-GGCA---TT-----TGTTTTTT-------------------------------------------------------------T-TT--TT-TAACGCTAACGC--TTACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACCCAGATGCTTAACGTGCAGAGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCA...................2012.002110000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACC.....................1911.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCC....................1911.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAGGT............................2011.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCAGATGCT.............2611.001010000
............................................................................................................................................................................................................................ATTTCATATTCAGGGATTTTGGGGAT.................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGATGCTTAACGTGCAGAGC2211.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGCTTAACGTGCAGA..1911.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGACACCCAGATGCTT............2011.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAGGAGGTGGACACCCAGA.................2311.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACCCAGAT................2311.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCATGAAGGAGGTGGA.........................1830.331000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTGGA.........................2030.331010000
droBip1
CCA-T--ACC-A------------CTCCG---------CCCTACTC-CGCAATCGCTGT-----------------------------------------------------------------------------------TG-------GCCC--------------AGGT----GGCAAGGTGCGCT-GCGAGGACTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGGGGATTCGGC-------------TGGCGCATCAAAGC----GAACTTGGCTTTTGATGTAA-A------------TA----------CGC--TGAAA-----------GT------------------TT-CC--------------------------GGCCCGG-----GT----C-TCGA-GGCA---TT----------CTT-------------------------------------------------------------T-TT--TT-TAACGCTAACGC--TTACTCAATAATTAACAGGTCCCATGTCCATGAAGGAGGTGGACACCCAGATGCTTAACGTGCAGAGCSizeHit CountTotal NormTotal
No Reads
dp5
CCT-------A------------T----------------------CCG--------CC-----TGAGCG--CCTCCGC---------------------------------------------------CA-ACTCC----GACTCC---GACC--------------AGGT----GGCAAAGTGCGCT-GTTGGGGCTT---AGAATCCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTTGCT---------TTTGGGACGCATCAAAGC----CAACTTGTCTTTTGATGTAA-A------------TGCGGGACAATGCGGGAGGGAG-CACTGCACTG--TTTT------GGTAGAGATA-CTGAGGCG--ATGGG------ATTTTTTACCCC--------CGATAC---CA-ATCA---TT----------TTT--G----------------------------------------------------------T-TT--T-------T---TGTTGTTGTTC---AATTAACAGGTCCTATGTCCATGAAGGAGGTGGACACCCAAATGCTCAATGTGCAGGCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAAATGCTCAATGTGCAGGC.2412.0020110000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAAATGCTCAATGTGCAG...2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAAATGCTCAATGTGC.....2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGGTGGACACCCAAATGCT.............2411.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAAATGCTCAATGTGCA....2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGCTCAATGTGCAGGC.2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCATGAAGGAGGTGGA.........................1920.5010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCATGAAGGAGGTGGA.........................1820.5010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT--G----------------------------------------------------------T-TT--T-------T---TGTTGTTGTT...............................................................1990.1110100000000
droPer2
CCTGT--CC-CT----------AT----------------------CCG--------CC-----TGAGAG--CCTCCGC---------------------------------------------------CA-ACTCC----GACTCC---GACC--------------AGGT----GGCAAAGTGCGCT-GTTGGGGCTT---AGAATCCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTTGCT---------TTTGGGACGCATCAAAGC----CAACTTGTCTTTTGATGTAA-A------------TG----------CGGGAGGGGAGCACTGCACTG--TTTT------GGTGGAGATA-CTGAGGCG--ATGGG------ATTT-TTACCCC--------CGATAC---CA-ATCG---TT-----------TT-------------------------------------------------------------T-TT--T--T--TGT---TG------TTC---AATTAACAGGTCCAATGTCCATGAAGGAGGTGGACACCCAAATGCTCAATGTGCAGGCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCCATGAAGGAGGTGGA.........................2113.003003000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGTCCATGAAGGAGGTGG..........................2211.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCATGAAGGAGGTGGA.........................1830.331010000
droWil2
CTA-----------------------------------------------------------AA--------------------------------------------------------------------AGC------CGA-------CTCC--------------AGGT----GGCAAAGTGCGCTTGTTTGGGCTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATTTTGGGGATTGGGG--ATTTCTGTT--TGGCTCATCAAAGT----CAACTTGCCTTTTGATGTAT-A------------TA----------AATACAAT-A-----------GCTTCTGGGGTGGATGGAGACT-CTAAGAAAGCATAAGCAAAACATTTCT-TCCTT-------CCGTAAA---AAAAAAA---T------------CT-------------------------------------------------------------GTTT--T-----TCT---TGT--CTCTGCCATAATTAACAGGACCCATGTCCATGAAGGAAGTGGACACACAAATGCTCAATGTCCAGAGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCATGTCCATGAAGGAA..............................1913.00300030
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAA..............................2013.00300120
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGGAAGTGGAC........................2612.00201010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAAGTGGACACACAAATGCTCA...........2711.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAAATGCTCAATGTCCAGA..2211.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAAGTGG..........................1911.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAA..............................1811.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAAGTGGAC........................2211.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCCATGTCCATGAAGGAAGTGGAC........................2711.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGCTCAATGTCCAGA..1911.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAAATGCTCAATGTCCAGAGC2411.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAAATGCTCAATGTCC.....1911.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCCATGAAGG................................1811.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................AACATTTCT-TCCTT-------CCGT.......................................................................................................................................................................................1811.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAAGT............................2011.00100010
..............................................................................................................................................GA-------CTCC--------------AGGT----GGCAAAGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAAGTGGA.........................2311.00100010
............................................................................................................................................................................................................................................................................................................AT-A------------TA----------AATACAAT-A-----------GCTTCTGG..................................................................................................................................................................................................................................................2211.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAAGTGGA.........................2011.00100010
droVir3
CGCAG--CC-CG-----------C----------------------CCA--------CC-----TAAAGG--CAGGCAT---------------------------------------------------CG-GCACAGGA----ATAGGTGGCC--------------AGGT----GGCCAAGTGAGCT-GGCAGGGCTT---AGAAGACG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTCAGT-------------TGACGCTTCAAAGC----CAGCTACGCTTTTGATGTAA-AAGAAAGTGAAAATG----------CGGA-----A-----------AA------------------TG-CC--------------------------GTTGC-------CA-------G-----C-------------------------------------------------------------------AAAGTTCAAG---T-AT--TTTT-ACAC---TGC--ACTCTTAATAATTAACAGGACCCATGTCTATGAAGGAGGTGGACACACAAATGCTCAACGTGCAGAGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCCATGTCTATGAAGGAGGT............................2312.002000000000000002000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TT-TGGGGATTCAGT-------------TGACGCT........................................................................................................................................................................................................................................................................................................................................2112.002000000000020000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCTATGAAGGAGGT............................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCTATGAAGGAGGTG...........................2311.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTATGAAGGAGGTGGAC........................2011.001000000000000000000000000000000000000000000000000000000000000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGAAGGAGGTGGACACACAAATGCT.............2811.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCATGTCTATGAAGGAGGTGGACA.......................2711.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCTATGAAGGAGGTG...........................1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACACAAAT................2311.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCCATGTCTATGAAGGAGGTG...........................2411.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACACACAAATGCTCAACGTGCAGA..2611.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGAAGGAGGTGGACAC......................1911.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGAAGGAGGTGGACACACAAA.................2411.001000000000000000010000000000000000000000000000000000000000000000
droMoj3
CCC-------C-----------GTCTCCGGCGCACCCACTAGACTTACG--------CC-----TAAGAGCGCCGGCATCGACACAAGCAGAAGCTGAATGAGAAGTAGCAGCAGCAGGAGCGGTAGGAGC-AGCACAAGCATA-------GCCC--------------AGGT----GGCCAAGTGCGCT-GTCAGGGCTT---AGAAGCCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTTACT-------------TGACGCATCAAAGC----CATCTTGGCTTTTGATGTGA-A------------AG----------AAAGCGGAAA-----------AA------------------TG-CT--------------------------GCCAC-------C--------AGA-AGC-------------------------------------------------------------------AGAGTTCAAG---T-AT--TTTT-ACGC---TGC--ACTCTTAATAATTAACAGGCCCCATGTCCATGAAGGAGGTGGACACACAGATGTTCAACGTGCAGAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--ACTCTTAATAATTAACAG..................................................2011.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACACAGATGTTCAACGTGCAGAGC2711.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACACAGAT................2311.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATGTCCATGAAGGAGGT............................2011.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACACACAGATGTTCAACGTGCAGA..2611.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGGAGGTGGACACACAGA.................2211.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGTGGACACACAGATGTT.............2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGATGTTCAACGTGCAGAGC2411.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCATGAAGGAGGTGGACA.......................2111.001001000
...................................................................................................................CAGGAGCGGTAGGAGC-AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATGTTCAACGTGCAGAGC2211.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGATGTTCAACGTGCAGAGC2311.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACACACAGATGTTCAACGTGCAGAG.2811.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCATGAAGGAGGTG...........................1930.331100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATGAAGGAGGTGG..........................1930.331100000
droGri2
CCC-------A-----------AAAACACA---------------------------GA-CACA--------------------------------------------------------------------AACACAGCC----ATG---GCCC--------------AGGT----GGCCAAGTGCGCT-GGCAGGGCTT---AGAAGGCG--TTTAGTATTTCATATTCAGGGATT-TGGGGATTTCAC---------T---TGACGCATCAAAGCCCAACAACTTGGCTTTTGATGTGAGA------------AG----------CG---AGAAA-----------G-------------------------------CGGAA--------------------------------A---TA-AAAACTAATGCTGCTGATGCCTTTTTTTGTTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTATAAGTAGAGTAAAAGTATTTAT--A--T--ATG---TGC--ACTTTTAATAATTAACAGGACCCATGTCCATGAAGGAGGTGGACACACAGATGCTCAACGTGCAGAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:44 PM