ID:dsi_17682 |
Coordinate:3r:17445047-17445196 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_17444908_17445046_+]; CDS [3r_17444908_17445046_+]; intron [3r_17445047_17445538_+]
No Repeatable elements found
| ##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- GTGCACGATGAAAGGCGCAATGCCAGCGAAAAGTTCCTCGAATTCTGCTGGTATGCTTGGCTTAAGATTTTCTGATAATTCCATGTTTCTCTTTTCCAATCGAAAAGGTCAATATTCTTAAAATAACTTACAATTCTTTTTATTAAGAATATTTCGTTTCTTTATTGGGTGCTACCTACATATTATTTGTTCATCTTTAAGAATATTGATCATATCTTTGAGAGAATTGGGTTTTAAACATCTGAAATTC **************************************************.............(((((.....((((((...((((........((((((.((((.((..(((((((((((.....................))))))))))))).))))...))))))........)))))))))).....)))))...************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
M025 embryo |
SRR553485 Chicharo_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
GSM343915 embryo |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................TGGTTCATCGTTGAGAATATTG.......................................... | 22 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ................................GTTCCTCGAATTCTGCTG........................................................................................................................................................................................................ | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................................................................................................TTTGAGAGAATTGGGTTTTAAACATC........ | 26 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........................................................................................................................................................................................................................TTGAGAGAACTGGGT.................. | 15 | 1 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TCAAATGTCAATATTCTTAAAA............................................................................................................................... | 22 | 3 | 12 | 0.08 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| .........................................................................................................................................................................................TTTGTTTAACTTTAAGAA............................................... | 18 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ................................................TGGTATGCTTGGCTCAAAG....................................................................................................................................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| .........................................................................................................................................................................................................................TTGAGAGAATTCGGGT................. | 16 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
|
CACGTGCTACTTTCCGCGTTACGGTCGCTTTTCAAGGAGCTTAAGACGACCATACGAACCGAATTCTAAAAGACTATTAAGGTACAAAGAGAAAAGGTTAGCTTTTCCAGTTATAAGAATTTTATTGAATGTTAAGAAAAATAATTCTTATAAAGCAAAGAAATAACCCACGATGGATGTATAATAAACAAGTAGAAATTCTTATAACTAGTATAGAAACTCTCTTAACCCAAAATTTGTAGACTTTAAG
**************************************************.............(((((.....((((((...((((........((((((.((((.((..(((((((((((.....................))))))))))))).))))...))))))........)))))))))).....)))))...************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
M023 head |
M053 female body |
|---|---|---|---|---|---|---|---|---|
| .....................................................................................AAAGAGAAAAGTTTCGCTTT................................................................................................................................................. | 20 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| .......................GTCACTTGTCAAGGAGCTG................................................................................................................................................................................................................ | 19 | 3 | 20 | 0.20 | 4 | 0 | 4 | 0 |
| .................................................................................................................................................................................TGAAAAATAAACAAGTAGA...................................................... | 19 | 2 | 13 | 0.08 | 1 | 0 | 0 | 1 |
Generated: 04/23/2015 at 09:02 PM