ID:dsi_17650 |
Coordinate:3r:10164965-10165019 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_10164823_10164964_+]; CDS [3r_10164823_10164964_+]; CDS [3r_10165020_10165140_+]; exon [3r_10165020_10165140_+]; intron [3r_10164965_10165019_+]
No Repeatable elements found
| ##################################################-------------------------------------------------------################################################## AGCACTGAAGGAGCTGCTGCATCATTGTGCCTTGCGAAGGCTAACTGAAAGTGAGTAAGCACTGTAATAACAGTTTCAGTTACGTGATCCATGATCCAATTCCAGGGGAGTTTATTTCCCTGCAGAGTAAGTCATCCTGCCATCGGCAAACAGTG **************************************************...........(((......((...(((......)))....)).........)))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|
| .....TGAAGGAGCTGCTGCATCATTGTGCCT........................................................................................................................... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 |
| ...........................................................................................................................AGAGTAAGTCATCCTGCCATCGGCAAA..... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 |
| ..............................................................TGTAATAGCAGTTTCAGTTACGTGA.................................................................... | 25 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ...ACTGAAGGAGCTGCTGCATCATTGTGC............................................................................................................................. | 27 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| .......................ATTGTGCCTTGCGAAGGA.................................................................................................................. | 18 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| AGCACTGAAGGAGCTGCTGCATCATTG................................................................................................................................ | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .........................................TAACTGAAAGTGAGT................................................................................................... | 15 | 0 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 |
| .....TGAAGGAGCTGAGGCATC.................................................................................................................................... | 18 | 2 | 17 | 0.06 | 1 | 1 | 0 | 0 | 0 |
|
TCGTGACTTCCTCGACGACGTAGTAACACGGAACGCTTCCGATTGACTTTCACTCATTCGTGACATTATTGTCAAAGTCAATGCACTAGGTACTAGGTTAAGGTCCCCTCAAATAAAGGGACGTCTCATTCAGTAGGACGGTAGCCGTTTGTCAC
**************************************************...........(((......((...(((......)))....)).........)))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................ACTTGGTTAAGGTCCC................................................ | 16 | 1 | 6 | 0.67 | 4 | 4 | 0 | 0 | 0 |
| ....................................................................TTGTGAAAGTCAATGTACT.................................................................... | 19 | 2 | 8 | 0.13 | 1 | 0 | 1 | 0 | 0 |
| ....................................................................................ACTAAGTAGTAGGTTCAGGT................................................... | 20 | 3 | 11 | 0.09 | 1 | 1 | 0 | 0 | 0 |
| ................................................................................................................................TTCGGTAGGAAGGTAGTCGT....... | 20 | 3 | 13 | 0.08 | 1 | 0 | 0 | 1 | 0 |
| ...........................................................................................ACTTGGTTAAGGTCC................................................. | 15 | 1 | 17 | 0.06 | 1 | 1 | 0 | 0 | 0 |
| .......................................................................................AGGAACTAGGTTAAG..................................................... | 15 | 1 | 18 | 0.06 | 1 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:34 AM