ID:

dsi_17629

 Coordinate:

3l:5994360-5994509 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.3 -19.3 -19.2

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GTTCTCAAAATGTACAAAAACATAAATGGAAATGATTCAGTACAATGGTGGTGAGTGATATAATTTGGTTCTTTCAACGATTCTTTTAGTATTTTCCCTATATGTACAAAAAGTGTAAACGAAATTGTGGAAAAGCTATACAATTTGTTAGTTAACAAAGCGAATAAGTTGATTAGAACTCGGCTGAATAAATTAGTTTGTTTTCTCTTCGATTCGTTTTGTTTGTAGTTTTTAATTTTTTAATACGGCT
*******************************************************...........((((((.(((((.((((...((((.((((((........((((...((....))....)))))))))))))).....((((((....))))))..))))..)))))..)))))).....***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 GSM343915
embryo
...................................................................................................................................................................ATAAGTTGATTAGAACTCGGCT................................................................. 22 0 1 12.00 12 12 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGTCGCTTCGATTCGT................................. 16 2 20 4.75 95 0 0 84 0 11 0 0 0 0 0
...............................................................................................................................................................GCGAATAAGTTGATTAGAACTCGGCT................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AATAAGTTGATTAGAACTCGGCT................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................GATTAGAACTCGGCTGAATAAATTAGTT.................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TAGAACTCGGCTGAATAAATTAGTT.................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..........................TGGAAATGATTCAGTACAATGGTGGTGAG................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................ATAAGTTGATTAGAACTCGGCG................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGCGAATAAGTTGATTAGAACTCGGC.................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................TGATATAATTTGGTTCTTTCAACGA.......................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTTCTCTTCGATTCGTTTTGT............................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AATAAGTTGATTAGAACTCGGCG................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................AAACGAAATTGTGGAAAAGCT................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............TACAAAAACATAAATGGAAATGAT...................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.....................................................................TCTTTCAACGATTCTTTTAGTATT............................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..TCTCAAAATGTACAAAAACATAAATGGA............................................................................................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................TATACAATTTGTTAGTTAACAAAGCGAA...................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AAGTTGATTAGAACTCGGCT................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................GAAATTGTGGAAAAGCTATACAATT......................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................ATAAGTTGATTAGAACTCGGCC................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................GTAAACGAAATTGTGGAAAAGCT................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AACAAAGCGAATAAGTTGATTAGAACT...................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................................................................TGTTACCGAAATTGTGGA....................................................................................................................... 18 2 10 0.50 5 0 0 1 4 0 0 0 0 0 0
.........................................................................................................................................................................................................TGTCTCTTCGATTCGT................................. 16 1 5 0.40 2 0 0 0 0 0 0 0 2 0 0
.........................ATGCAAATGATTCTGAACAATGG.......................................................................................................................................................................................................... 23 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................ATACAATTTGTTATTTAAAAAA........................................................................................... 22 2 6 0.33 2 0 0 2 0 0 0 0 0 0 0
...............................................................................................................................................................................GAACTCGGCTGAAGGAACTAG...................................................... 21 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................TTGTCGCTTCGATTCGT................................. 17 2 20 0.25 5 0 0 0 0 0 0 0 5 0 0
.....................................................................................................................................................................AAGTTGATTAGACCTC..................................................................... 16 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
.......................................CTACAATGGTGGTGA.................................................................................................................................................................................................... 15 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..........................................CAAAGGTAGTGAATGATATAA........................................................................................................................................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 1 0
........................................TACAATTGTGGTGAGTAAT............................................................................................................................................................................................... 19 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................TTGTCTGTAGTTTTTA................ 16 1 12 0.08 1 0 0 0 0 1 0 0 0 0 0
........................................TACAATGGTGGTTAGGGCT............................................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................................TTTCGCTTCGATTCGT................................. 16 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CAAGAGTTTTACATGTTTTTGTATTTACCTTTACTAAGTCATGTTACCACCACTCACTATATTAAACCAAGAAAGTTGCTAAGAAAATCATAAAAGGGATATACATGTTTTTCACATTTGCTTTAACACCTTTTCGATATGTTAAACAATCAATTGTTTCGCTTATTCAACTAATCTTGAGCCGACTTATTTAATCAAACAAAAGAGAAGCTAAGCAAAACAAACATCAAAAATTAAAAAATTATGCCGA
*****************************************************************...........((((((.(((((.((((...((((.((((((........((((...((....))....)))))))))))))).....((((((....))))))..))))..)))))..)))))).....******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
..........................................................................................................................TTAAGACCTTTTCGATTTGATA.......................................................................................................... 22 3 5 0.20 1 1 0 0 0 0
........................................................................................................................................................................ATCTAATGTTGAGCCTACT............................................................... 19 3 14 0.07 1 1 0 0 0 0
..............................................................................................................................CAACTTTTCGGTATGTTA.......................................................................................................... 18 2 14 0.07 1 0 1 0 0 0
.....................................................................................................................................................TCAGTTGTTTCGCTGATT................................................................................... 18 2 15 0.07 1 0 0 1 0 0
.................................................................................................................................................................................................................................ATGAAAAATTAAGAAGTTATG.... 21 3 17 0.06 1 0 0 0 1 0
.............................................................................................................................................................................................................CGAAGCGAAGCAAAACAAAC......................... 20 2 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:5994310-5994559 - dsi_17629 GTTCTCAAAATGTACAAAAACATAAA-------TGGAAATGATT-CAGTACAATGGTG---------GT--------GA-GTG--AT-------------ATAATTTGGTTCTTTCAACGATT------C-TTTTAGT----ATTTTCC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TTAGAA-CTC-GGCTGAATAAA-TTAGTT----------T-GTTTTCTCTTCG--ATTCGTTTTGTTTGTAGTTTTT---------------------AATTTTTTAATAC-GGCT
droSec2 scaffold_2:6033085-6033334 - GTTCTCAAAATGTACAAAAACATAAA-------TGGAAATGATT-CAGTACAATGGTG---------GT--------GA-GTG--AT-------------ATAATTTGGTTCTTTCAACGATT------T-TTTTAGT----ATTTTTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TTAGAA-CTC-GGCTGAATAAA-TTAGTT----------T-GTTTTCTCTTCG--ATTCGTTTTGCTTGTAGTTTTT---------------------AATTTTTTAATAC-GGCT
dm3 chr3L:6084736-6084985 - GTTCTCAAAATGTACAAACACATAAA-------TGGAAATGATT-CAGTACAATAATG---------GT--------GA-GTG--AT-------------ATAATTTGGTTCTTTTAACGATT------C-TTTTAGT----ATTTTCC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGATTAAA-TTAGTT----------T-GTTTTCTCTTCG--ATTCGTTTTGTTTGTAGTTTTT---------------------ATTTTTTTAATAC-GGCT
droEre2 scaffold_4784:8781962-8782208 - GTTCTCAAAATGTACAAAAAAAAAAA---G-AGTGAAAATGATA-GAGTACAATGAGT---------GT--------GA-GTG--AT-------------ATAATTTGGTTCTTTCAACGATT------C-CTTTAGT----ATTTTCC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT----------TTC-----GTTTCTTT--TCGTTTTGTTTGTAGTTTTC-----------------------TTTTTTAATAC-GGCT
droYak3 3L:6667375-6667627 - TTTCTCAAAATGTACAAAA-CCAAAATA-GAAGTGAAAATGATA-GCGTACAATGAGT---------GT--------GA-GTG--AT-------------ATAATTTGGTTCTTTCAACGATT------C-TTTTAGT----ATTTTCC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT-----------TCTT-----TTCG--TTTCGTTTTGTTTGTAGTTTTC-----------------TTT-TTTTTTTTAATAC-GGCT
droEug1 scf7180000409466:3860456-3860733 - TTTCTCAAAATGTACAAAAACCTAAA-------TGGAAATGATA-CAATGCACTGAGT---------GGGTGT-GTGGA-GTG--AT-------------ATAATTTGGTTCTTTCAACGATT------C-TTTTAGT----ATTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAATTTG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT----------TTCTTTTCTTTTCG--TTTCGTTTTTGTTGTAGTTTTTGTTTTAAATTTTTTTTGTTTTC--TTTTTAATAC-GGCT
droBia1 scf7180000302193:3608945-3609177 - GTTCTCGAAATGTACAAAA-CCCGAA-------TGGAAATGATA-CA-----ATGAGT-------------------GA-GTG--AT-------------ACAATTTGGTTCTTTCAACGATT------C-TTTCAGT----ATTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-G-AAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT----------ATCTT----------T--TCGTTTTG-TGGTAGTTCTC-----------------TTTTCG--TTTTAATAC-GGCT
droTak1 scf7180000415868:847266-847507 - GTTCTCAAAATGTACAAAAATCTGAA-------TGGAAATGATA-CA-----ATGAGT-------------------GA-GTG--AT-------------ACAATTTGGTTCTTTCAACGATT------C-TTTTAGT----ATTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAATGAAAT-TG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT----------TTCTTTTCGTTTCA--TTTCGTTTTG-TTGTAGTTTTT---------------------TG-TTTTTAATAC-GGCT
droEle1 scf7180000491193:887061-887292 - GTTCTCAAAATGTACAAAAACCTAAA-------TGGAAATGATA-CA-----ATGAGT---------GT--------GA-ATG--AT-------------ATAATTTGGTTCTTTCAACGATT------C-TTTTAGT----ATTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT----------TTATT----------T--TCGTATTG-TTGTAGTTTTT---------------------CA---TTTAATAC-GGCT
droRho1 scf7180000779866:32229-32460 + GTTCTCAAAATGTACAAAAACCTAAA-------TGGAAATGATA-CA-----ATGAGT---------GT--------GA-GTG--AT-------------ATAATTTGGTTCTTTCAACGATT------T-TTGTAGT----ATTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT----------TTCTT----------T--TCGTTTTC-TTGTAGATTTT---------------------C---TTTTTATAC-GGCT
droFic1 scf7180000453929:1507699-1507928 + GTTCTCAAAATGTACAAAAACCTAAA-------TGGAAATGATA-CA-----ATGAGT---------GT--------GA-GTG--AT-------------A-AATTTGGTTCTTTCAACGATT-----CCTTTTTAGT----ATTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAAACTC-GGCTGAATAAA-TTAGTT----------TTCTT----------T--TCGTTT----TGTAGTTTT-------------------------TTTTTAATAC-GGCT
droKik1 scf7180000302334:589783-590026 - GTTCTCAAAATGTACAAAAACCTAAA-------TGGAAATGATA-CA-----ATGAGT---------GT--------GA-GTGAGAT-------------ATACTTTGGTTCTTTCAACGATT------C-TTTTAGT----ATTTTT----------------------------------------------------------------------------GTTTTCTATATGTACAAAAAGTGTTAACGAAAT-TC-----------------------T-GAAAAAGCTATACAATTTGTTAG---TTTTAACAAAGCGAATAAG--TTGTTTAAGAAACTC-GGCTGAATAAA-TTAGTT----------TTCTT----------A--TCGTTTTGTTTTTGGTTTTT---------------------TG--TTTTTTTAC-GGCT
droAna3 scaffold_13337:20856806-20857029 + GTTCTCAAAATGTACAAAAACCTATT-------TGGAAATTATG-CA-----ATGGGT---------GA--------GA-GTG--AT-------------A-AACCTGGTTCTTTCAACGATT------C-ATTTGGT----TTTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAATTGTAAACGAAAT-TG-----------------------T-GGAAAAGCTATACAATTT-TAAG---TT--AACAAAGCGAATAAG--TTAT-TAAGAA-CTCTGGCTGAATAAA-TTAGTTGC------------------------------------GATAGTTT-C-----------------TTTTCAATTTTCAATAC-GGCT
droBip1 scf7180000396707:561675-561881 - GTTCTCAGAATGTACAAA-ACCTAAT-------TCGAAATAATG-CA-----GTGGGT---------GA--------GA-GTG--AT-------------AAACCTTGGTTCCTTCAACGATT------C-ATTGGGT-----TTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAATTGTAAACGAAAT-TG-----------------------T-GGAGAAGCTATACAAT-TGTAAG---TT--AACAAAGCGAATAAG--TTAT-TAAGAA-CTC-GGCTGAATAAAGTTAGTT-----------TCTT----------T--T-----------------------------------------------CAATAC-GGCT
dp5 XR_group6:9592317-9592570 + GTTCTCAAAATGTACAAAAACCTGAA-------TGGAAATGATA-CA-----ATGAGT---------GTGTGAGGAGGG-GTGATAT-------------ATATTTTGGTTTCTTCAAC-ATTTTTTTCC-TTTTAGTAGGTATTT-TCCCATA--T---------------------------------------------------------ACTCGCATGTA----TTGTATGTACAAAAGGTGTAAACGAAAT-TG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TT---TAAGAA-CTC-GGCTGAATAAA-TTAGTTGAGTTGTATTATCTT----------T--T-----TG-TTGTA-----------------------------------------GGCT
droPer2 scaffold_35:131820-132073 - GTTCTCAAAATGTACAAAAACCTGAA-------TGGAAATGATA-CA-----ATGAGT---------GTGTGAGGAGGG-GTGATAT-------------ATATTTTGGTTTCTTCAAC-ATTTGTTTCC-TTTTAGTAGGTATTA-TCCCATA--T---------------------------------------------------------ACTCGCATGTA----TTGTATGTACAAAAGGTGTAAACGAAAT-TG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TT---TAAGAA-CTC-GGCTGAATAAA-TTAGTTGAGTTGTATTATCTT----------T--T-----TG-TTGTA-----------------------------------------GGCT
droWil2 scf2_1100000004511:3356377-3356400 - ATTTTCATCGAAGATAAAAACATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:597645-597921 - ATTTTCA-AATGTACAAAA-TCTAAT-GTT-AATGAAAATAATGTTAACGC-----GC----TAGCAA---------TA-ATA--TT-------------ATCATTTGGTTCA-TCAAG-AGCATTTTCT-TTTTAACATAT--TT---TCATA--TCTTTTCTTATGTTTTTTTTTTCTT--------------------TTT-A-------GAATTACATATG---TTTGTATGTACACAAGTTTGAAACAAATT-TG-----------------------TTAAAAATTCTATACAATTCGTTTGTTGCT--AACAAAGAAGTTAAGAGTATT-TAAGAA-CCT-TGGAAAATAAT-T--GT-----------------------CG--TTTCGTATTGT---------------------------------------TTATAA-GACA
droMoj3 scaffold_6680:626295-626589 + ATTTTCA-AATGTACAAAA-TCTAAT-ATT-AAGGGAAATGAT---AATGC-----GC----TAGCAAT--------AC-TTT--TC-------------ATCATTTGGTTC----AAG-AGCATTTCGT-TTATATCATAT--TT---ACTTT--TCTT----TATATAATCTTTATCTT--------------------TTTTAAATTAATTAATTACATATGTTTTATTTATATACAAAAGTTGAAAACGAATT-TTTTTTTTTTTTTTTTTTTTTGTTTT-AAAATGTCTATACAATTTGTTAA-----------G--------AG--TGTT-TAAGAA-TTTAGAAGAAATAAA-TAAGGG--------------------------------TTTGCTTG-ATTTTTT---------------------ATTATTTTTATAA-GACA
droGri2 scaffold_15110:1842894-1843200 - ATTTTCA-AATGTACAAAA-TCTAAT-------CGAAATTATAA-TA-----AATAATGTGATTACAA---------TACTTT--TCCATTATTCTCCTCATCATCATACA----CAAG-AGCATTTTT--------------------TCATTTTTCAGTTTTCAAGTTTTTTTTGTCTTGATTCGTTTCGTTCGTTTCGTTT-A-------GAATTACATAT---TTATGTATGTACACAAGATTTAAACAAATT-TGTTTCTTTTTTTT------TTTGTT-AAAATATCTATACAATTGGTTGA---T---AATAAAAAA---GAG--TATT-AAAGAA-CATTTGAAAAATAAA-TTTGAG---GC--------------------------------------TTTTT---------------------ATTGTTTAGATAAGAACT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTTCTCAAAATGTACAAAAACATAAA-------TGGAAATGATT-CAGTACAATGGTG---------GT--------GA-GTG--AT-------------ATAATTTGGTTCTTTCAACGATT------C-TTTTAGT----ATTTTCC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TTAGAA-CTC-GGCTGAATAAA-TTAGTT----------T-GTTTTCTCTTCG--ATTCGTTTTGTTTGTAGTTTTT---------------------AATTTTTTAATAC-GGCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................ATAAG--TTGA-TTAGAA-CTC-GGCT.....................................................................................................22112.0012012000000000000000
.................................................................................................................................................................................................................................................................................................................................GCGAATAAG--TTGA-TTAGAA-CTC-GGCT.....................................................................................................2612.00202000000000000000
....................................................................................................................................................................................................................................................................................................................................AATAAG--TTGA-TTAGAA-CTC-GGCT.....................................................................................................2312.00202000000000000000
..............................................................................................................................................................................................................................................................................................................................................GA-TTAGAA-CTC-GGCTGAATAAA-TTAGTT----------.............................................................................2811.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................TAGAA-CTC-GGCTGAATAAA-TTAGTT----------.............................................................................2511.00100100000000000000
.................................TGGAAATGATT-CAGTACAATGGTG---------GT--------GA-G....................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................ATAAG--TTGA-TTAGAA-CTC-GGCG.....................................................................................................2211.00101000000000000000
................................................................................................................................................................................................................................................................................................................................AGCGAATAAG--TTGA-TTAGAA-CTC-GGC......................................................................................................2611.00100000010000000000
.................................................................................TG--AT-------------ATAATTTGGTTCTTTCAACGA............................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................TTTCTCTTCG--ATTCGTTTTGT..................................................2111.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................AATAAG--TTGA-TTAGAA-CTC-GGCG.....................................................................................................2311.00101000000000000000
........................................................................................................................................................................................................................................................AAACGAAAT-TG-----------------------T-GGAAAAGCT...............................................................................................................................................................2111.00100010000000000000
............TACAAAAACATAAA-------TGGAAATGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
..............................................................................................................TCTTTCAACGATT------C-TTTTAGT----ATT....................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
..TCTCAAAATGTACAAAAACATAAA-------TGGA................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.....................................................................................................................................................................................................................................................................................................TATACAATTTGTTAG---TT--AACAAAGCGAA...............................................................................................................................2811.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................AAG--TTGA-TTAGAA-CTC-GGCT.....................................................................................................2011.00101000000000000000
............................................................................................................................................................................................................................................................GAAAT-TG-----------------------T-GGAAAAGCTATACAATT.......................................................................................................................................................2511.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................ATAAG--TTGA-TTAGAA-CTC-GGCC.....................................................................................................2211.00101000000000000000
......................................................................................................................................................................................................................................................GTAAACGAAAT-TG-----------------------T-GGAAAAGCT...............................................................................................................................................................2311.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................AACAAAGCGAATAAG--TTGA-TTAGAA-CT...........................................................................................................2711.00100000001000000000
droSec2
GTTCTCAAAATGTACAAAAACATAAA-------TGGAAATGATT-CAGTACAATGGTG---------GT--------GA-GTG--AT-------------ATAATTTGGTTCTTTCAACGATT------T-TTTTAGT----ATTTTTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TTAGAA-CTC-GGCTGAATAAA-TTAGTT----------T-GTTTTCTCTTCG--ATTCGTTTTGCTTGTAGTTTTT---------------------AATTTTTTAATAC-GGCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................GAAAT-TG-----------------------T-GGAAAAGCTATACAATTT......................................................................................................................................................2611.0010100
.......................................................................................................................................................................................................................................................................................................................................AAG--TTGA-TTAGAA-CTC-GGC......................................................................................................1911.0010010
.....................ATAAA-------TGGAAATGATT-CAGT....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
dm3
GTTCTCAAAATGTACAAACACATAAA-------TGGAAATGATT-CAGTACAATAATG---------GT--------GA-GTG--AT-------------ATAATTTGGTTCTTTTAACGATT------C-TTTTAGT----ATTTTCC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGATTAAA-TTAGTT----------T-GTTTTCTCTTCG--ATTCGTTTTGTTTGTAGTTTTT---------------------ATTTTTTTAATAC-GGCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................TAAACGAAAT-TG-----------------------T-GGAAAAGCTA..............................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---T.............................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000100000
.....................................................................................................................................................................................................................................................TGTAAACGAAAT-TG-----------------------T-GGAAAAGCTATA............................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.................................................................................................................................................................................................................................................AAAGTGTAAACGAAAT-TG-----------------------T-GGAAAAGC................................................................................................................................................................2714.0040000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000
.........................................................................................................................................................................................................................................................AACGAAAT-TG-----------------------T-GGAAAAGCTATA............................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TAAG--TTGA-TAAGAA-CTC-GGCTGATTAAA-.............................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGC......................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000011010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................T-TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---T.............................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................T-TG-----------------------T-GGAAAAGCTATACAATTTGT....................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GCGAATAAG--TTGA-TAAGAA-C............................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................A-TAAGAA-CTC-GGCTGATTAAA-TTAGT........................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TAAGAA-CTC-GGCTGATTAAA-TTAGTT----------.............................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TAAACGAAAT-TG-----------------------T-GGAAAAGCTATA............................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................T--AACAAAGCGAATAAG--TTGA-TAAGAA-C............................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................T-GTTTTCTCTTCG--ATTCGTTTTGTT.................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TATACAATTTGTTAG---TT--AACAAAGCGAA...............................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000
......................TAAA-------TGGAAATGATT-CAGTACAATGG.............................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................TCG--ATTCGTTTTGTTTGTAGTTTT........................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................TAAACGAAAT-TG-----------------------T-GGAAAAGCTATACA..........................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................GAAAT-TG-----------------------T-GGAAAAGCTG..............................................................................................................................................................1821.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000002000000000
.................................................................................................................................................TTCC--------------------------------------------------------------------------------CTATATGTACAAAA..................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AAAGCGAATAAG--TTGA-TAAGAA-CTC-GGC......................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGTACAAACACATAAA-------TGGAAATGA...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TTTGTTAG---TT--AACAAAGCGAATAAG--.........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TAAA-------TGGAAATGATT-CAGTACA.................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AACGAAAT-TG-----------------------T-GGAAAAGCTATACAA.........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................GAAAT-TG-----------------------T-GGAAAAGCTATACAATT.......................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAGTTTTT---------------------ATTTTTTTAATAC-GGC.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GTAAACGAAAT-TG-----------------------T-GGAAAAG.................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................A-CTC-GGCTGATTAAA-TTAGTT----------T-...........................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AT-TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---..............................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................TTGGTTCTTTTAACGATT------C-TTTTAGT----A......................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TC-GGCTGATTAAA-TTAGTT----------T-GTTTTCTCT..................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ACAAACACATAAA-------TGGAAATGATT-CAG.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CATAAA-------TGGAAATGATT-CAGTACAA................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................AACGAAAT-TG-----------------------T-GGAAAAG.................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------..........................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................AGCGAATAAG--TTGA-TAAGAA-CTC-GGCT.....................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AACGAAAT-TG-----------------------T-GGAAAAGCTATACAAA........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................G---TT--AACAAAGCGAATAAG--TTGA-TAAGA...............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATAAA-------TGGAAATGATT-CAGTACAATGG.............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................CAAAGCGAATAAG--TTGA-TAAGAA-CTC-.........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CACATAAA-------TGGAAATGATT-CAGTACAA................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................AACAAAGCGAATAAG--TTGA-TAAGAA-C............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TACAAACACATAAA-------TGGAAATGATT-CAG.....................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTTGTTTGTAGTTTTT---------------------ATTTT.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................AAT-TG-----------------------T-GGAAAAGCTATACAATTTGTTA..................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TAAG--TTGA-TAAGAA-CTC-GGCTGATTAA...............................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TTTGTTAG---TT--AACAAAGCGAATAAG--T........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AACGAAAT-TG-----------------------T-GGAAAAGCTAT.............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---..............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................ACACATAAA-------TGGAAATGATT-CAG.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TAAG--TTGA-TAAGAA-CTC-GGCTGATTAAA-T............................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AGTGTAAACGAAAT-TG-----------------------T-GGAAAAGC................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TGGTTCTTTTAACGATT------C-TTTTAGT----A......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GA-TAAGAA-CTC-GGCTGATTAAA-TTAGT........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................G--AT-------------ATAATTTGGTTCTTTTAACGATT------C-T.................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTCG--ATTCGTTTTGTTTGTAGTT..........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AT-TG-----------------------T-GGAAAAGCTATACAAT........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................T-TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---..............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............TACAAACACATAAA-------TGGAAATGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TGA-TAAGAA-CTC-GGCTGATTAAA-TTA..........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................ACGAAAT-TG-----------------------T-GGAAAAGC................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TTGA-TAAGAA-CTC-GGCTGATTAAA-TT...........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................GCGAATAAG--TTGA-TAAGAA-CTC-GGC......................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TAGTT----------T-GTTTTCTCTTCG--ATTCGTT......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AT-TG-----------------------T-GGAAAAGCTATACAATTTG.....................................................................................................................................................2411.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTTTCC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAAC.........................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCG--ATTCGTTTTGTTTGTAGT...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AAGTGTAAACGAAAT-TG-----------------------T-GGAAAAGC................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TTTCTCTTCG--ATTCGTTTTGTTTGT..............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................ACAAAAAGTGTAAACGAAAT-TG-----------------------T-GGA.....................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GTTCTCAAAATGTACAAAAAAAAAAA---G-AGTGAAAATGATA-GAGTACAATGAGT---------GT--------GA-GTG--AT-------------ATAATTTGGTTCTTTCAACGATT------C-CTTTAGT----ATTTTCC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT----------TTC-----GTTTCTTT--TCGTTTTGTTTGTAGTTTTC-----------------------TTTTTTAATAC-GGCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TTTCTCAAAATGTACAAAA-CCAAAATA-GAAGTGAAAATGATA-GCGTACAATGAGT---------GT--------GA-GTG--AT-------------ATAATTTGGTTCTTTCAACGATT------C-TTTTAGT----ATTTTCC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GGAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT-----------TCTT-----TTCG--TTTCGTTTTGTTTGTAGTTTTC-----------------TTT-TTTTTTTTAATAC-GGCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........GTACAAAA-CCAAAATA-GAAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
........................................................................................................................................................................................................................................................AAACGAAAT-TG-----------------------T-GGAAAAGCT...............................................................................................................................................................2111.00101000000000
droEug1
TTTCTCAAAATGTACAAAAACCTAAA-------TGGAAATGATA-CAATGCACTGAGT---------GGGTGT-GTGGA-GTG--AT-------------ATAATTTGGTTCTTTCAACGATT------C-TTTTAGT----ATTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAATTTG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT----------TTCTTTTCTTTTCG--TTTCGTTTTTGTTGTAGTTTTTGTTTTAAATTTTTTTTGTTTTC--TTTTTAATAC-GGCTSizeHit CountTotal NormTotal
No Reads
droBia1
GTTCTCGAAATGTACAAAA-CCCGAA-------TGGAAATGATA-CA-----ATGAGT-------------------GA-GTG--AT-------------ACAATTTGGTTCTTTCAACGATT------C-TTTCAGT----ATTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-G-AAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT----------ATCTT----------T--TCGTTTTG-TGGTAGTTCTC-----------------TTTTCG--TTTTAATAC-GGCTSizeHit CountTotal NormTotal
No Reads
droTak1
GTTCTCAAAATGTACAAAAATCTGAA-------TGGAAATGATA-CA-----ATGAGT-------------------GA-GTG--AT-------------ACAATTTGGTTCTTTCAACGATT------C-TTTTAGT----ATTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAATGAAAT-TG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT----------TTCTTTTCGTTTCA--TTTCGTTTTG-TTGTAGTTTTT---------------------TG-TTTTTAATAC-GGCTSizeHit CountTotal NormTotal
No Reads
droEle1
GTTCTCAAAATGTACAAAAACCTAAA-------TGGAAATGATA-CA-----ATGAGT---------GT--------GA-ATG--AT-------------ATAATTTGGTTCTTTCAACGATT------C-TTTTAGT----ATTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT----------TTATT----------T--TCGTATTG-TTGTAGTTTTT---------------------CA---TTTAATAC-GGCTSizeHit CountTotal NormTotal
No Reads
droRho1
GTTCTCAAAATGTACAAAAACCTAAA-------TGGAAATGATA-CA-----ATGAGT---------GT--------GA-GTG--AT-------------ATAATTTGGTTCTTTCAACGATT------T-TTGTAGT----ATTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAA-CTC-GGCTGAATAAA-TTAGTT----------TTCTT----------T--TCGTTTTC-TTGTAGATTTT---------------------C---TTTTTATAC-GGCTSizeHit CountTotal NormTotal
No Reads
droFic1
GTTCTCAAAATGTACAAAAACCTAAA-------TGGAAATGATA-CA-----ATGAGT---------GT--------GA-GTG--AT-------------A-AATTTGGTTCTTTCAACGATT-----CCTTTTTAGT----ATTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAAGTGTAAACGAAAT-TG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TTGA-TAAGAAACTC-GGCTGAATAAA-TTAGTT----------TTCTT----------T--TCGTTT----TGTAGTTTT-------------------------TTTTTAATAC-GGCTSizeHit CountTotal NormTotal
No Reads
droKik1
GTTCTCAAAATGTACAAAAACCTAAA-------TGGAAATGATA-CA-----ATGAGT---------GT--------GA-GTGAGAT-------------ATACTTTGGTTCTTTCAACGATT------C-TTTTAGT----ATTTTT----------------------------------------------------------------------------GTTTTCTATATGTACAAAAAGTGTTAACGAAAT-TC-----------------------T-GAAAAAGCTATACAATTTGTTAG---TTTTAACAAAGCGAATAAG--TTGTTTAAGAAACTC-GGCTGAATAAA-TTAGTT----------TTCTT----------A--TCGTTTTGTTTTTGGTTTTT---------------------TG--TTTTTTTAC-GGCTSizeHit CountTotal NormTotal
No Reads
droAna3
GTTCTCAAAATGTACAAAAACCTATT-------TGGAAATTATG-CA-----ATGGGT---------GA--------GA-GTG--AT-------------A-AACCTGGTTCTTTCAACGATT------C-ATTTGGT----TTTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAATTGTAAACGAAAT-TG-----------------------T-GGAAAAGCTATACAATTT-TAAG---TT--AACAAAGCGAATAAG--TTAT-TAAGAA-CTCTGGCTGAATAAA-TTAGTTGC------------------------------------GATAGTTT-C-----------------TTTTCAATTTTCAATAC-GGCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GTTCTCAGAATGTACAAA-ACCTAAT-------TCGAAATAATG-CA-----GTGGGT---------GA--------GA-GTG--AT-------------AAACCTTGGTTCCTTCAACGATT------C-ATTGGGT-----TTTGTC--------------------------------------------------------------------------------CTATATGTACAAAAATTGTAAACGAAAT-TG-----------------------T-GGAGAAGCTATACAAT-TGTAAG---TT--AACAAAGCGAATAAG--TTAT-TAAGAA-CTC-GGCTGAATAAAGTTAGTT-----------TCTT----------T--T-----------------------------------------------CAATAC-GGCTSizeHit CountTotal NormTotal
No Reads
dp5
GTTCTCAAAATGTACAAAAACCTGAA-------TGGAAATGATA-CA-----ATGAGT---------GTGTGAGGAGGG-GTGATAT-------------ATATTTTGGTTTCTTCAAC-ATTTTTTTCC-TTTTAGTAGGTATTT-TCCCATA--T---------------------------------------------------------ACTCGCATGTA----TTGTATGTACAAAAGGTGTAAACGAAAT-TG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TT---TAAGAA-CTC-GGCTGAATAAA-TTAGTTGAGTTGTATTATCTT----------T--T-----TG-TTGTA-----------------------------------------GGCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................TATGTACAAAAGGTGTAAACGAAAT-...................................................................................................................................................................................................2512.0020000000200
.................................................................................................................................................................................................................................................................................................................................................TAAGAA-CTC-GGCTGAATAAA-TTAGT........................................................................................2512.0020100000010
.....................................................................................................................................................................................................................................................................................................................................ATAAG--TT---TAAGAA-CTC-GGCTGA...................................................................................................2211.0010100000000
.....................................................TGAGT---------GTGTGAGGAGGG-GTGATA...............................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..................................................................................................................................................................................................................................................................................................................................................AAGAA-CTC-GGCTGAATAAA-TTAGT........................................................................................2411.0010100000000
.................................TGGAAATGATA-CA-----ATGAGT---------GTGTG.............................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..........................................TA-CA-----ATGAGT---------GTGTGAGGAGGG-G....................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
GTTCTCAAAATGTACAAAAACCTGAA-------TGGAAATGATA-CA-----ATGAGT---------GTGTGAGGAGGG-GTGATAT-------------ATATTTTGGTTTCTTCAAC-ATTTGTTTCC-TTTTAGTAGGTATTA-TCCCATA--T---------------------------------------------------------ACTCGCATGTA----TTGTATGTACAAAAGGTGTAAACGAAAT-TG-----------------------T-GAAAAAGCTATACAATTTGTTAG---TT--AACAAAGCGAATAAG--TT---TAAGAA-CTC-GGCTGAATAAA-TTAGTTGAGTTGTATTATCTT----------T--T-----TG-TTGTA-----------------------------------------GGCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................TA-CA-----ATGAGT---------GTGTGAGGAGGG-G....................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
....................................AAATGATA-CA-----ATGAGT---------GTGTGAGGAGG.......................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
droWil2
ATTTTCATCGAAGATAAAAACATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
ATTTTCA-AATGTACAAAA-TCTAAT-GTT-AATGAAAATAATGTTAACGC-----GC----TAGCAA---------TA-ATA--TT-------------ATCATTTGGTTCA-TCAAG-AGCATTTTCT-TTTTAACATAT--TT---TCATA--TCTTTTCTTATGTTTTTTTTTTCTT--------------------TTT-A-------GAATTACATATG---TTTGTATGTACACAAGTTTGAAACAAATT-TG-----------------------TTAAAAATTCTATACAATTCGTTTGTTGCT--AACAAAGAAGTTAAGAGTATT-TAAGAA-CCT-TGGAAAATAAT-T--GT-----------------------CG--TTTCGTATTGT---------------------------------------TTATAA-GACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................TTAAAAATTCTATACAATTCGTTTGT................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AATAAT-T--GT-----------------------CG--TTTCGTATTGT---------------------------------------TT.........2411.001000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TGCT--AACAAAGAAGTTAAGAGTATT-TAA.................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TCATTTGGTTCA-TCAAG-AGCATTTTCT-..................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TGCT--AACAAAGAAGTTAAGAGTATT-....................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TACAATTCGTTTGTTGCT--AACAAAGAAGT...............................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................TCAAG-AGCATTTTCT-TTTTAACATA........................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
droMoj3
ATTTTCA-AATGTACAAAA-TCTAAT-ATT-AAGGGAAATGAT---AATGC-----GC----TAGCAAT--------AC-TTT--TC-------------ATCATTTGGTTC----AAG-AGCATTTCGT-TTATATCATAT--TT---ACTTT--TCTT----TATATAATCTTTATCTT--------------------TTTTAAATTAATTAATTACATATGTTTTATTTATATACAAAAGTTGAAAACGAATT-TTTTTTTTTTTTTTTTTTTTTGTTTT-AAAATGTCTATACAATTTGTTAA-----------G--------AG--TGTT-TAAGAA-TTTAGAAGAAATAAA-TAAGGG--------------------------------TTTGCTTG-ATTTTTT---------------------ATTATTTTTATAA-GACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................ATT-AAGGGAAATGAT---AATGC-----G............................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........................................................................................................................................................................................................................................................................................................................................................TTAGAAGAAATAAA-TAAGGG--------------------------------TTTGC..................................................2511.001000001
droGri2
ATTTTCA-AATGTACAAAA-TCTAAT-------CGAAATTATAA-TA-----AATAATGTGATTACAA---------TACTTT--TCCATTATTCTCCTCATCATCATACA----CAAG-AGCATTTTT--------------------TCATTTTTCAGTTTTCAAGTTTTTTTTGTCTTGATTCGTTTCGTTCGTTTCGTTT-A-------GAATTACATAT---TTATGTATGTACACAAGATTTAAACAAATT-TGTTTCTTTTTTTT------TTTGTT-AAAATATCTATACAATTGGTTGA---T---AATAAAAAA---GAG--TATT-AAAGAA-CATTTGAAAAATAAA-TTTGAG---GC--------------------------------------TTTTT---------------------ATTGTTTAGATAAGAACTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:34 AM