ID:

dsi_17594

 Coordinate:

node_32529:51-200 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.9 -6.6 -6.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TGTTTTTGTTATTAACGGATCATTTATTCGACTAATAAATTAATAACTACGTAAGTATATATATATATACTGCGTATATACTGCGTATGACCAATTCGCTTCCGCATGTCAATCTTGCGGCGTCGATGGTTTAACTTCTTTTCGGAACACCTTAAATAAGTTGCACAACCACCAGGAATCCCATACAGCAAGTAATCGTAAATCAAGAATTTGGCTTCGACTCTGCTAATTTCCCTGGGGCTTTCAAGCT
****************************************************************************************************************...((((((......(((.....((((....)))).)))........)))))).....******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O002
Head
 SRR618934
dsim w501 ovaries
 M025
embryo
 M053
female body
 SRR902009
testis
 M024
male body
..............ACGGATCATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 26 1 12 45.42 545 512 0 0 1 5 27 0 0 0 0 0 0
....TTTGTTATTAACGGATCATTTATTGGAC.......................................................................................................................................................................................................................... 28 1 5 7.20 36 2 29 0 1 2 0 0 0 0 0 2 0
.........................ATTCGACTAATAAATTAATAACTAC........................................................................................................................................................................................................ 25 0 12 6.42 77 0 0 57 1 0 0 19 0 0 0 0 0
..............ACGGATCATTTATTGGACTAATAAATT................................................................................................................................................................................................................. 27 1 12 5.92 71 69 0 0 0 1 1 0 0 0 0 0 0
.........................ATTCGACTAATAAATTAATAACTACG....................................................................................................................................................................................................... 26 0 12 3.25 39 0 0 38 0 1 0 0 0 0 0 0 0
.............AACGGATCATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 27 1 5 2.80 14 14 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATCATTTATTCGACTAATAAAT.................................................................................................................................................................................................................. 26 0 12 2.75 33 30 0 0 0 2 1 0 0 0 0 0 0
............TAACGGATCATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 28 1 5 2.60 13 13 0 0 0 0 0 0 0 0 0 0 0
.....TTGTTATTAACGGATCATTTATTGGAC.......................................................................................................................................................................................................................... 27 1 5 2.20 11 5 1 0 3 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TTCGACTCTGCTAATTTCCCTGGGGC......... 26 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
................................................................................................................TCTTGCGGCGTCGATGGTTTAACTT................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TCGTAAATCAAGAATTTGGC................................... 20 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0
..............ACGGATCATTTATTGGACTAATAAA................................................................................................................................................................................................................... 25 1 12 1.83 22 17 0 0 0 0 5 0 0 0 0 0 0
...............................CTAATAAATTAATAACTACGT...................................................................................................................................................................................................... 21 0 12 1.75 21 0 0 0 0 0 0 21 0 0 0 0 0
.........................ATTCGACTAATAAATTAATAACTA......................................................................................................................................................................................................... 24 0 12 1.67 20 0 0 19 0 0 0 0 1 0 0 0 0
.........................ATTCGACTAATAAATTAAT.............................................................................................................................................................................................................. 19 0 12 1.58 19 0 0 19 0 0 0 0 0 0 0 0 0
....TTTGTTATTAACGGATCATTTATT.............................................................................................................................................................................................................................. 24 0 5 1.20 6 0 5 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................TCTTTTCGGAACACCTTAAATAAG.......................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................TTGCGGCGTCGATGGTTTAACTTC................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................CATACAGCAAGTAATCGTAAATCAAGAA......................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TCGGAACACCTTAAATAAGTTGCACAACC................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TACAGCAAGTAATCGTAAATCAAGAATT....................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................CATACAGCAAGTAATCGTAAATCAAGAATT....................................... 30 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................TTCGGAACACCTTAAATAAGT......................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....TTTGTTATTAACGGATCATTTAT............................................................................................................................................................................................................................... 23 0 5 1.00 5 0 4 0 0 0 0 0 0 0 0 1 0
..........................................................................................................TGTCAATCTTGCGGCGTCGATG.......................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................ACCTAAGGATATATATATATGCT................................................................................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TGTCAATCTTGCGGCGTCGATGGTT....................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................ATTCGACTAATAAATTAATAACTACGT...................................................................................................................................................................................................... 27 0 12 0.83 10 0 0 0 2 0 0 0 8 0 0 0 0
....TTTGTTATTAACGGATCATTTATTGGA........................................................................................................................................................................................................................... 27 1 5 0.80 4 1 3 0 0 0 0 0 0 0 0 0 0
...........TTAACGGATCATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 29 1 5 0.80 4 2 0 0 1 0 1 0 0 0 0 0 0
......TGTTATTAACGGATCATTTATTGGAC.......................................................................................................................................................................................................................... 26 1 5 0.80 4 1 1 0 1 1 0 0 0 0 0 0 0
..............ACGGATCATTTATTCGACTAATAAATT................................................................................................................................................................................................................. 27 0 12 0.67 8 8 0 0 0 0 0 0 0 0 0 0 0
....TTTGTTATTAACGGATCATTTATTGG............................................................................................................................................................................................................................ 26 1 5 0.60 3 0 3 0 0 0 0 0 0 0 0 0 0
...TTTTGTTATTAACGGATCATTTATT.............................................................................................................................................................................................................................. 25 0 5 0.60 3 1 0 0 0 0 2 0 0 0 0 0 0
....TTTGTTATTAACGGATCATTTA................................................................................................................................................................................................................................ 22 0 5 0.60 3 0 2 0 0 0 0 0 0 0 0 1 0
...TTTTGTTATTAACGGATCATTTATTGGAC.......................................................................................................................................................................................................................... 29 1 5 0.60 3 0 0 0 1 2 0 0 0 0 0 0 0
.........................ATTGGACTAATAAATTAATAACTA......................................................................................................................................................................................................... 24 1 12 0.58 7 2 0 0 5 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AATTTGGCTTGGACTCTTCGAA..................... 22 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................ATTGGACTAATAAATTAATAACTACGT...................................................................................................................................................................................................... 27 1 12 0.42 5 0 0 0 4 1 0 0 0 0 0 0 0
.............AACGGATCATTTATTGGACTAATAAATT................................................................................................................................................................................................................. 28 1 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0
............TAACGGATCATTTATTCGACTAATAAAT.................................................................................................................................................................................................................. 28 0 5 0.40 2 1 0 0 0 0 1 0 0 0 0 0 0
....TTTGTTATTAACGGATCATTTATTG............................................................................................................................................................................................................................. 25 1 5 0.40 2 0 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GCTAGTAATCGTGAATCA............................................. 18 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0
..............ACGGATCATTTATTCGACTAATAAA................................................................................................................................................................................................................... 25 0 12 0.33 4 3 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................GCTAGTAATCGTGAATC.............................................. 17 2 7 0.29 2 0 0 0 0 2 0 0 0 0 0 0 0
.........................ATTGGACTAATAAATTAATAACTACT....................................................................................................................................................................................................... 26 2 12 0.25 3 3 0 0 0 0 0 0 0 0 0 0 0
...............CGGATCATTTATTGGACTAATAAATT................................................................................................................................................................................................................. 26 1 12 0.25 3 1 0 0 0 0 2 0 0 0 0 0 0
......TGTTATTAACGGATCA.................................................................................................................................................................................................................................... 16 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
..TTTTTGTTATTAACGGATCATTTAT............................................................................................................................................................................................................................... 25 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
..........ATTAACGGATCATTTATTGGACTAATA..................................................................................................................................................................................................................... 27 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
TGTTTTTGTTATTAACGGATAATTT................................................................................................................................................................................................................................. 25 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
...TTTTGTTATTAACGGATCATTT................................................................................................................................................................................................................................. 22 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
............TAACGGATCATTTATTGGACTAATAAATT................................................................................................................................................................................................................. 29 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
.....TTGTTATTAACGGATCATTTATTGGA........................................................................................................................................................................................................................... 26 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
..TTTTTGTTATTAACGGATCATTTATTGGAC.......................................................................................................................................................................................................................... 30 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
...TTTTGTTATTAACGGATCATTTAT............................................................................................................................................................................................................................... 24 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
....TTTGTTATTAACGGATCATTTATTA............................................................................................................................................................................................................................. 25 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ATTTGGCTTGGACTCTTCGAA..................... 21 3 10 0.20 2 0 0 0 0 2 0 0 0 0 0 0 0
......TGTTATTAACGGATCATTTATTGGACAA........................................................................................................................................................................................................................ 28 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
............TAACGGATCATTTATTGGACTAATAA.................................................................................................................................................................................................................... 26 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
TGTTTTTGTTATTAACGGATCATTT................................................................................................................................................................................................................................. 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
............TAACGGATCATTTATTGGACTAA....................................................................................................................................................................................................................... 23 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
...........TTAACGGATCATTTATTGGACTAATAAAA.................................................................................................................................................................................................................. 29 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
..TTTTTGTTATTAACGGATTATTTATT.............................................................................................................................................................................................................................. 26 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
....TTTGTTATTAACGGATCATTT................................................................................................................................................................................................................................. 21 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
...TTTTGTTATTAACGGATTATTTATT.............................................................................................................................................................................................................................. 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
............TAACGGATCATTTATTGGACTAATA..................................................................................................................................................................................................................... 25 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
.........TATTAACGGATCATTTATTGGA........................................................................................................................................................................................................................... 22 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0
............TAACGGATCATTTATTGGACTAATAAA................................................................................................................................................................................................................... 27 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
...TTTTGTTATTAACGGA....................................................................................................................................................................................................................................... 16 0 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0
........................TATTGGACTAATAAATTAATAACTACGT...................................................................................................................................................................................................... 28 1 12 0.17 2 0 0 0 1 1 0 0 0 0 0 0 0
..............ACGGATCATTTATTGGACTAATAAATA................................................................................................................................................................................................................. 27 2 12 0.17 2 1 0 0 0 0 1 0 0 0 0 0 0
.........................ATTCGACTAATAAATTAATAACTACGTA..................................................................................................................................................................................................... 28 0 12 0.17 2 0 0 0 2 0 0 0 0 0 0 0 0
..............ACTGATCATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 26 2 12 0.17 2 2 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATCATTTATTGGACTAATAA.................................................................................................................................................................................................................... 24 1 12 0.17 2 1 0 0 0 0 1 0 0 0 0 0 0
..........................TTGGACTAATAAATTAATAACTACT....................................................................................................................................................................................................... 25 2 12 0.17 2 1 0 0 0 0 1 0 0 0 0 0 0
...............CGGATCATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 25 1 12 0.17 2 0 0 0 0 0 2 0 0 0 0 0 0
........................TATTGGACTAATAAATTAATAACT.......................................................................................................................................................................................................... 24 1 12 0.17 2 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CGTAAGTCAAGGATCTGGC................................... 19 3 13 0.15 2 0 0 0 0 0 0 0 0 0 0 0 2
...........................................................................................................................................................................................GCTAGTAATCGTGAAT............................................... 16 2 20 0.15 3 0 0 0 0 1 2 0 0 0 0 0 0
.........................ATTGGACTAATAAATTAA............................................................................................................................................................................................................... 18 1 14 0.14 2 0 0 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTTCGACTCTGCTGA..................... 15 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................GCTAGTAATCGCAAATCA............................................. 18 2 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................GCGTCGATGGTGTAA.................................................................................................................... 15 1 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................TTCGACTCCGCTAAGCTCC................ 19 3 11 0.09 1 0 0 0 0 0 1 0 0 0 0 0 0
...................TCATTTATTGGACTAATAAATTAATA............................................................................................................................................................................................................. 26 1 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................ATTCGACTAATAAATTAATAACTAAGT...................................................................................................................................................................................................... 27 1 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
..............TCGGATCATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ATGGATCATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATCATTTATTGGACTAAT...................................................................................................................................................................................................................... 22 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................TGGACTAATAAATTAATAACTACT....................................................................................................................................................................................................... 24 2 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
..............AAGGATCATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATCATATATTGGACTAATAAAT.................................................................................................................................................................................................................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATCATTGATTCGACTAATAAAT.................................................................................................................................................................................................................. 26 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATCACTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATCATTTATTGGACTAATAAATC................................................................................................................................................................................................................. 27 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................ATTGGACTAATAAATTAATAACTAC........................................................................................................................................................................................................ 25 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATCATTTATTGGACTAATAAATTAA............................................................................................................................................................................................................... 29 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
................GGATCATTTATTGGACTAATAAATT................................................................................................................................................................................................................. 25 1 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
......................TTTATTGGACTAATAAATTAATAACT.......................................................................................................................................................................................................... 26 1 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0
........................TATTCGACTAATAAATTAATAACTACG....................................................................................................................................................................................................... 27 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................TGGACTAATAAATTAATAACTACGTAAG................................................................................................................................................................................................... 28 1 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................ATTCGACTAATAAATTAATAACT.......................................................................................................................................................................................................... 23 0 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
..............ACGGATCAGTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACGTATCATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................TTGGACTAATAAATTAATAACTACGTA..................................................................................................................................................................................................... 27 1 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
..............ACAGATCATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATTATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATCATTCATTGGACTAATAAATT................................................................................................................................................................................................................. 27 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................ATTGGACTAATAAATTAATAACTACG....................................................................................................................................................................................................... 26 1 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................TGGACTAATAAATTAATAACTACGTAAA................................................................................................................................................................................................... 28 2 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
..............ACGGATTATTTATTCGACTAATAAAT.................................................................................................................................................................................................................. 26 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATCATTTATTCGACTAATAA.................................................................................................................................................................................................................... 24 0 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
..............AGGGATCATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............CCGGATCATTTATTGGACTAATAAAT.................................................................................................................................................................................................................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............GCGGATCATTTATTGGACTAATAAATT................................................................................................................................................................................................................. 27 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATCATTTATTGGACTAATAAGT.................................................................................................................................................................................................................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................TTGGACTAATAAATTAATAACTACGTAAGT.................................................................................................................................................................................................. 30 1 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................ATTGGACTAATAAATTAATAACTACGTA..................................................................................................................................................................................................... 28 1 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................ATTGGACTAATAAATTAATAACT.......................................................................................................................................................................................................... 23 1 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0
..........................TTGGACTAATAAATTAATAACTACTT...................................................................................................................................................................................................... 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATCATTTATTGTACTAATAAAT.................................................................................................................................................................................................................. 26 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCAACCTTGCGGCGGCGGT........................................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................TTGCAGAACCCCCAGGA......................................................................... 17 2 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0
..............ACGGATCATTTATTAGACT......................................................................................................................................................................................................................... 19 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TCTGCTAAGGTCCCT.............. 15 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
................GGATCATTTATTCGACT......................................................................................................................................................................................................................... 17 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................TACTAATAAATTAATA............................................................................................................................................................................................................. 16 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GAATTAGGGTTCGACT............................ 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
.................GATCATTTATTCGACT......................................................................................................................................................................................................................... 16 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................CGCTAGTAATCGTATATC.............................................. 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

ACAAAAACAATAATTGCCTAGTAAATAAGCTGATTATTTAATTATTGATGCATTCATATATATATATATGACGCATATATGACGCATACTGGTTAAGCGAAGGCGTACAGTTAGAACGCCGCAGCTACCAAATTGAAGAAAAGCCTTGTGGAATTTATTCAACGTGTTGGTGGTCCTTAGGGTATGTCGTTCATTAGCATTTAGTTCTTAAACCGAAGCTGAGACGATTAAAGGGACCCCGAAAGTTCGA
********************************************************************************...((((((......(((.....((((....)))).)))........)))))).....**************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 O002
Head
 M024
male body		 M053
female body
 M025
embryo
 SRR902008
ovaries
 M023
head
...........AATTGCCTAGTAAATAAGCTGATT....................................................................................................................................................................................................................... 24 0 5 9.60 48 36 2 2 2 2 2 0 0 2 0 0 0
..........TAATTGCCTAGTAAATAAGCTGATT....................................................................................................................................................................................................................... 25 0 5 3.80 19 0 3 10 0 2 2 0 0 1 1 0 0
.......CAATAATTGCCTAGTAAATAAGCTGATT....................................................................................................................................................................................................................... 28 0 5 3.60 18 0 1 1 0 0 2 12 2 0 0 0 0
..........TAATTGCCTAGTAAATAACCTGATT....................................................................................................................................................................................................................... 25 1 5 2.60 13 0 1 10 0 0 2 0 0 0 0 0 0
ACAAAAACAATAATTGCCTAGTAA.................................................................................................................................................................................................................................. 24 0 5 2.20 11 0 5 1 4 0 1 0 0 0 0 0 0
..........................AAGCTGATTATTTAATTATTGATGCAT..................................................................................................................................................................................................... 27 0 12 1.92 23 0 4 0 11 0 6 0 0 0 0 2 0
.................CTAGTAAATAAGCTGATT....................................................................................................................................................................................................................... 18 0 13 1.54 20 19 0 0 0 1 0 0 0 0 0 0 0
..............TGCCTAGTAAATAAGCTGATT....................................................................................................................................................................................................................... 21 0 13 1.46 19 19 0 0 0 0 0 0 0 0 0 0 0
......................................TAATTATTGATGCATTCA.................................................................................................................................................................................................. 18 0 19 1.26 24 24 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................CTGGCGTTCATTAGCATT................................................. 18 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................GTGTGGGTGGTCCTTCGGGTCTGT............................................................... 24 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
......ACAATAATTGCCTAGTAAATAAGCTGAT........................................................................................................................................................................................................................ 28 0 5 1.00 5 0 3 0 1 1 0 0 0 0 0 0 0
.........ATAATTGCCTAGTAAATAAGCTGATT....................................................................................................................................................................................................................... 26 0 5 0.80 4 0 1 0 0 1 0 0 0 2 0 0 0
..........TAATTGCCTAGTAAATAAGCTGATTA...................................................................................................................................................................................................................... 26 0 5 0.60 3 0 0 0 0 3 0 0 0 0 0 0 0
..........TAATTGCCTAGTAAATAACCTGAT........................................................................................................................................................................................................................ 24 1 5 0.40 2 0 1 0 1 0 0 0 0 0 0 0 0
......ACGATAATTGCCTAGTAAATA............................................................................................................................................................................................................................... 21 1 5 0.40 2 0 0 0 0 0 0 0 0 0 2 0 0
.......CAATAATTGCCTAGTAAATAAGCTGAT........................................................................................................................................................................................................................ 27 0 5 0.40 2 0 1 0 1 0 0 0 0 0 0 0 0
..........TAATTGCCTAGAAAATAACCTGATT....................................................................................................................................................................................................................... 25 2 5 0.40 2 0 0 1 0 0 1 0 0 0 0 0 0
.CAAAAACAATAATTGCCTAGTAAAT................................................................................................................................................................................................................................ 25 0 5 0.40 2 0 1 0 1 0 0 0 0 0 0 0 0
......ACAATAATTGCCTAGTAAATAAGCTGATT....................................................................................................................................................................................................................... 29 0 5 0.40 2 0 0 0 0 0 1 0 0 1 0 0 0
........................................................................................................................................AGAAAAGCCGTGTGG................................................................................................... 15 1 11 0.36 4 0 1 1 1 0 1 0 0 0 0 0 0
................CCTAGTAAATAAGCTGATT....................................................................................................................................................................................................................... 19 0 13 0.31 4 0 0 0 0 4 0 0 0 0 0 0 0
.....................................TTAATTATTGATGCATTCATATATGTAT......................................................................................................................................................................................... 28 1 7 0.29 2 0 0 0 2 0 0 0 0 0 0 0 0
...........................AGCTGATTATTTAATTATTGATGCAT..................................................................................................................................................................................................... 26 0 12 0.25 3 0 0 0 3 0 0 0 0 0 0 0 0
...................AGTAAATAAGCTGATTATTTAATTAT............................................................................................................................................................................................................. 26 0 12 0.25 3 0 1 0 1 1 0 0 0 0 0 0 0
........................ATAAGCTGATTATTTAATTATTGATGCAT..................................................................................................................................................................................................... 29 0 12 0.25 3 0 0 0 3 0 0 0 0 0 0 0 0
...................AGTAAATAAGCTGATT....................................................................................................................................................................................................................... 16 0 14 0.21 3 0 0 2 0 1 0 0 0 0 0 0 0
..................TAGTAAATAAGCTGATT....................................................................................................................................................................................................................... 17 0 14 0.21 3 0 0 0 1 2 0 0 0 0 0 0 0
....AAACAATAATTGCCTAGTAAAT................................................................................................................................................................................................................................ 22 0 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0
CAAAAAACAATAATTGCCTAGTAA.................................................................................................................................................................................................................................. 24 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
...AAAACAATAATTGCCTAGTAAAT................................................................................................................................................................................................................................ 23 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
.AAAAAACAATAATTGCCTAGTAAAT................................................................................................................................................................................................................................ 25 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
...........AATTGCCTAGTAAATAAGCTGATTATTT................................................................................................................................................................................................................... 28 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
...AAAACAATAATTGCCTAGTAA.................................................................................................................................................................................................................................. 21 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
...........AATTGCCTAGTAAATAAGCTGAT........................................................................................................................................................................................................................ 23 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
............ATTGCCTAGTAAATAAGCTGATTATTT................................................................................................................................................................................................................... 27 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
....AAACAATAATTGCCTAGTAAATAAGCTGAT........................................................................................................................................................................................................................ 30 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
........AATAATTGCCTAGTAAATAACCTGATT....................................................................................................................................................................................................................... 27 1 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0
........AATAATTGCCTAGTAAATAAGCTGATT....................................................................................................................................................................................................................... 27 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
...........AATTGCCTAGTAAATAAGCTGATTAT..................................................................................................................................................................................................................... 26 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
.......AAATAATTGCCTAGTAAATAACCTGATT....................................................................................................................................................................................................................... 28 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
......ACAATAATTGCCTAGTAAATAACCTGAT........................................................................................................................................................................................................................ 28 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0
.........ATAATTGCCTAGTAAATAAGCTGAT........................................................................................................................................................................................................................ 25 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
ACAAAAACAATAATTGCCTAGTAAAT................................................................................................................................................................................................................................ 26 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0
..........TAATTGCCTAGTAAATAAG............................................................................................................................................................................................................................. 19 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0 0
...........AATTGCCTAGTAAATAACCTGATTAT..................................................................................................................................................................................................................... 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
.........ATAATTGCCTAGTAAATAACCTGATT....................................................................................................................................................................................................................... 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
.............TTGCCTAGTAAATAAGCTGATTATT.................................................................................................................................................................................................................... 25 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
......ACAATAATTGCCTAGTAAATA............................................................................................................................................................................................................................... 21 0 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0 0
....AAACAATAATTGCCTAGTAAATAACCTGATT....................................................................................................................................................................................................................... 31 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................TGATTATTTAATTATTGATGCATTCATAT............................................................................................................................................................................................... 29 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
............................GCTGATTATTTAATTATTGATGCAT..................................................................................................................................................................................................... 25 0 12 0.17 2 0 0 0 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................CGTGGTGCTGGTCCTTAGGCT................................................................... 21 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0 0
...............GCCTAGTAAATAACCTGATT....................................................................................................................................................................................................................... 20 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0 0 0
..................TAGTAAATAAGCTGAT........................................................................................................................................................................................................................ 16 0 14 0.14 2 0 0 0 0 2 0 0 0 0 0 0 0
.....................AAAAAAAGCTGATTATTTAATTAT............................................................................................................................................................................................................. 24 2 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
..............TGCCTAGTAAATAAGCTGATTATTTAAT................................................................................................................................................................................................................ 28 0 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
...................AGTAAAAAAGCTGATTATTTAATTAT............................................................................................................................................................................................................. 26 1 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................ACCTGATTATTTAATTATTGATGCATTC................................................................................................................................................................................................... 28 1 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
........................ATAAGCTGATTATTTAATTATTGAT......................................................................................................................................................................................................... 25 0 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
................CCTAGTAAATAAGCTGATTA...................................................................................................................................................................................................................... 20 0 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0
........................AAAAGCTGATTATTTAATTATTGATGCAT..................................................................................................................................................................................................... 29 1 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................AAGCTGATTATTTAATTATTGATGC....................................................................................................................................................................................................... 25 0 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
.................CTAGTAAATAAGCTGATTATT.................................................................................................................................................................................................................... 21 0 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1
..........................AAGCTGATTATTTAATTATTGATGCATTCA.................................................................................................................................................................................................. 30 0 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0
...............GCCTAGTAAATAAGCTGATTATTT................................................................................................................................................................................................................... 24 0 12 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0
.................CTAGTAAATAAGCTGAT........................................................................................................................................................................................................................ 17 0 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0
...................AGTAAATAAGCTGATTTTTTAAT................................................................................................................................................................................................................ 23 1 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................CCGCAGCTACCAAATGAAC................................................................................................................. 19 3 19 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0
................CCTAGTAAATAAGCTGA......................................................................................................................................................................................................................... 17 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................AGCTGACTATTTAATTATTGAT......................................................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 node_32529:1-250 + dsi_17594 T-GTTTTTGTTATTAACGGATCATTTATTCGACTAATAAATTAATAACTACGTAAGTATATATATATATACTGCGTATATACTGCGTATGACCAATTCGCTTC------------------------------------CG------------------------------------------------C----ATG-TCAATCTTGCGGC-GT-----CGAT--GGTTTAACTTCTTTTC------GGAACACCTTAA--ATAAGTTGCACAACCACCAGGAATCCCATACAGCAAGTAATCGTAAATCAAGAATTTGGCTTCGACTCTGCTAATTTCCCTGGGGCTTTCAAGCT-----------
droSec2 scaffold_374:4978-5227 - T-TTTAC-------------------------------------------------------------------------GCATATAGTAACCAAATTGTTTCCAAATAGTCCAAATATTTCCAGCCAAAACGAGTTTGAGCTTCAAACCTAACGGAACTTTCTAAATATATAATTAAAGTTATGTAAAC----GTTTTCATTTGTGAAGC-GAAATTGCATGCATTTTAA---TTTCTGCATTCCAAAAGCAAAGTTCAAAGGCATCATACTTTCATTG-----------AGGA------------------------GCTTCGATTTAAATAATTTAAAATGGATTTTAAAGTATAAGTTATTTA
dm3 chr3RHet:239639-239879 - A-TTTAC-------------------------------------------------------------------------ACATAAAGTAACCAAACTGTCTCCAAATAGTCCAAATATTT----------CCAGTTTTTGCTTCAAACCTAACGGGTTTTTCTAAAAATAGAATTAAAGTTATGTACACGTACGTGTTCATTTGTGTAGC-GAAATTGCACACATTGTAA---TTTCTGCATTTCAAAAGCAAACTTCAAAGG---CATACTTTCAGTG-----------AGGA------------------------GCTTCGATTTAAATAATTTAAAATGGATTTTAAAGTAGAAGGTATTTA
droEre2 scaffold_3416:4862-4931 + T-GTCTT--------------------------------------------------------------------------T--GTTATTGACGGATCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCCGACTGACA-----------AATT------------------------AATACCTACGTAAGTATATATAATAAACT-------------------
droYak3 v2_chrUn_6976:6280-6525 - T-TAT-----------------------------------------------------------------------------GAAAATTAACCAGATTGTCCCAAAAATGCACAAATATGTGTATGGCAAAACCGTTTTGACT-TAATTCTAACGGGACATTCTAAAAATATAGTGTAAAGGGAGAACAA----CTGTTCATTTTTGCAGC-ACAGCGGAGTT--TTGATTGCTTTTCGTCGCAACGAAAGCGAATTTCAAAGTGGTCAAACGTGCGATT-----------CATA------------------------GGTCCAATTTTAATTATTTAAAATGAATTTTAAAGTTTCAGGTATTTA
droEug1 scf7180000408916:12476-12715 - T-GT----------------------------------------------------------------------------ACGAAAAGTAAACAAACCGT-----TAATGTCCAAACTTCTCCATGGCAAACTAGATTTTTCTGGAAATCTGATGGTTTTTTCTAAAATTAGAATTGAAGCTGTGAACAC----GTGTCCATTTGCAAAGC-GCAGCTGCACGCATCGAGA---ATATTTCACAACAAAAGCGAACTTCAAAGTTTTCAGTCAACTAATT-----------ACGC------------------------TGCCCAATTTATAATATATAAAATGGATTTTAAAATTGAAGGTATT--
droBia1 scf7180000301275:16777-17039 - T-TTTAA-------------------------------------------------------------------------GCAAAATTTATCGAAATTATCTATTAAAAGTCCAAACTTTTTTTTGGCATACCGGATTTTATTAGAAATCTAACGGTACTTTCTAAAAATAGATTTGCAATCCTGAACAC----GTGTTCATTTTGACAAC-GCAGTTGCGCT--TTGGAAGTTATTTCTATCTTTCAATTCGCCCTTTAAAGTGATCAGACTTACGCTA-----------AAGTGATCAGACG------------TATGCTCCGATTTGAATAATTTAACATTAATTATGAAATTGAAGGTATTTA
droTak1 scf7180000412833:213-462 - A-ATTA--------------------------------------------------------------------------TCGATAAGTAAACAAATTGTCTCAAAAATAACCAAGCTTTTTAATGGCAAACCGGAATTTTCTGGAAATCTAACGGGACTTTCTAAAAATATAACACAAAGTGTGAACAT----GTGTTCAATTTTGCAGC-GCAGCGGCGTT--ACGTTAGCATTTCGTCAAAACAAAGTTGCATTTCAATGTGGTCAAACTTTCACAA-----------GAGA------------------------GGGCCAAATTAGTTTATTTAAAATGAACCTTAAAGTTTCAGGTCTTTA
droEle1 scf7180000486777:72-322 - T-TTTAA-------------------------------------------------------------------------GCAAAATGTATCAAAATTGTCTCTTAAAAGTCCAAACTTCTCTTTGGCATACCGGATTTTACTAGAAATCTAACGGTACTTTCTAAAAATAGATTTGCAATCGTGAACAC----GTGTTCATTTTGGCAAC-GCAGCTGCGCT--TTGGAAGTTATTTCTCTCTTTCAATTCGCCCTTTAAAGTGATCAGACGTACGCTG-----------CAGT------------------------GCTCCGATTTGAATAATTTAACATGAATTATGAAATTGAAGGTATTTA
droRho1 scf7180000777469:3350-3591 - TATTTAA-------------------------------------------------------------------------GCAAAATGTAAAGAAATTTTCTCTTAAAAGTCTAAGCTTTTCTTTGGCATACCAGATTTTACTGGAAATCTAACGGTACTTTCTAAAAATAGCTTTGCAATCATGAACTG----GTGCTCATTTTTGCAAC-GCAGCTGCGCT--CAGAAAGTTGTTTCTCTAATTCAAATCACCCTTTAAAGAGT----------GCTT-----------GAGT------------------------GCTCGGAATTTAATTATTTAAAATGAACTTTGAAATTGAAGGTATATA
droFic1 scf7180000453174:9926-10173 - A-AATTT-------------------------------------------------------------------------ACGAAAAGTAAACAAATCGTTACTAAAATGTCCAAGCTTTTTCACTGCAAACTAGATTTTTCTGGAAATCTAACGGTTCTTTCTAAAAATATAATTGAAGCTGTGAAAAC----GTGTTCATTTGCAAAGC-GCATCTGAACGCATCGCGA---ATATTTCACAACAAAAGCGAACTTCAAAGTGTTCAGTCAACTAATT-----------ACGC------------------------TGCCCAATTTAAATTATATAAAATGGATTTTGAAGTTAAAGGTATT--
droKik1 scf7180000302522:13185-13433 - A-ATTAG-------------------------------------------------------------------------TCAAAATGTGAAGAATTTGTCTCTAAATTGTCTATATTTTGTCATTGCAAACTAGTTTCTCCTGGAATTCTAACGGGACATTCTAAAAATAGAATGCAAAGTGTGAACAC----GTGTTCAATTTTGCTGCTGCAGGTGCGTT---AGTGAGCTTTTCGTCAAAACAAAAGTGAAGTTCAAAGTGGTCGGACGTTCGCAA-----------AAGT------------------------GCTCCAAATTTAATTATTTAAAATGCATTTTAAAGTTGAAGGTATT--
droAna3 scaffold_7766:848-1097 - A-TTG-T-------------------------------------------------------------------------GCGAAAAGTTAAGGAACTGTCTACACAATGTCCAAGTCTTTCAATGGCAAACCAGATTTTTCTGGAAATCTAAAGGGACTTTCTAAAAATAGAATGCAAAGCTTGTACAC----GTGTTCAGTTTTGCAGC-GCAGCGGCATT--AAGTTAACTCTTCGTCAAAACATCATTGGATTTCAAAGTGTTCAAACGTTCGTTG-----------GAGA------------------------GGTCCGAATTTTATTATTTAAAATAAATTTTAAAGTTGAAGGTATTTA
droBip1 scf7180000391679:1-251 - T-TTTAA-------------------------------------------------------------------------GCAAAATGTATCAAAATTGTCTCATAAAAGTCCAAACTTCTCTTTGGCATACCGGATTTTACTAGAAATCTAACGGTACTTTCTAAAAATAGATTTGAAATCGTGAACAC----GTGTTCATTTTGGCAAC-GCAGCTGCGCT--TTGGAAGTTATTTCTCTCTTTCAATTCGCCCTTTAAAGTGATCAGACGTACGCTG-----------CAGT------------------------GCTCCGATTTGAATAATTTAACATGAATTATGAAATTGAAGGTATTTA
dp5 Unknown_singleton_3645:1421-1659 - T-TTG---------------------------------------------------------------------------ACAACATGTAACCATATCGTCTCATAAATGTCCAAACTTCTTTGTGGCAAACCGGATTT----------GCAACAGGACTTTCAAAAAATAGAATTGAAATGACGAACAC----ATGCTCACTTTTGCGAC-GTGTCTCTGCT--TTTTATGCTTTTGGTCAAAACAAAAGCGCACTTCAAAGTGATTACACGTTTGGCA-----------AAGT------------------------GTTCGAAGATTAATTATTTAAAATGGATTTTATAGTTGAAGGTATTTA
droPer2 scaffold_53:53257-53505 - T-TTG---------------------------------------------------------------------------ACAACATATAACCATGTCGTCTCATAAATGTCCAAACTTCTTTGTGGCAGACCGGATTTTTCCGAATTTGCAACGGGACTTTCTAAAAATAGAATTGAAATGATGAACAC----GTGTTCATTTTTACGAT-GCGTCTCTGTT--TTTTATGCTTTTTGTCAAAACAAAAGCGCACTTCAAAGTGATTAAACGTTTGGCA-----------AAGT------------------------GTTCGAAGACTAATTATTTAAAATGGATTTTGTAGTTAAAGGTATTTA
droWil2 scf2_1100000004947:1125474-1125723 - A-CTTGG-------------------------------------------------------------------------ACAAAACGAACACAAATTGACACTAAAATGTTCAATCTTCAAAACGCCAAACCGGGTTT-TCCGCAAATCTAACGGAACTTTCTAAAAATAGCATTGAAAGAATGAACTT----GTGTACATTTTTGCAGC-CCGTCTGAGCT--TTGTATGTACTTTGTCATTGCAAATTCGTACTTCAAAGTGATCAAACGTTTGACA-----------AAGT------------------------GGTCCGATATTAATAATTTAAAATGGATTTTGTAATTGAAGGTATTTA
droMoj3 scaffold_6473:12371207-12371451 - G-------------------------------------------------------------------------------ACAAAACCCACACAAATTGTGTCGTAAATGTCCAAACTATTTAATGGCAAACCGTTTTTTTGCGGGAATCTAACGGGA-TTTCTAAAAATAGCATTGAAAGCTACAACAC----TTGTTAAATGTTGCAAT-TTTTCGCAGCG--AAGAGAATTTTTTATTACACCAAAAGCAAACTTTAAAGTGGTAAAACGTTTGATT-----------GAGT------------------------GGTCCAAATTTAATTATTTAAAATGGTATTTAGAGTTGAAGGTATTTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
T-GTTTTTGTTATTAACGGATCATTTATTCGACTAATAAATTAATAACTACGTAAGTATATATATATATACTGCGTATATACTGCGTATGACCAATTCGCTTC------------------------------------CG------------------------------------------------C----ATG-TCAATCTTGCGGC-GT-----CGAT--GGTTTAACTTCTTTTC------GGAACACCTTAA--ATAAGTTGCACAACCACCAGGAATCCCATACAGCAAGTAATCGTAAATCAAGAATTTGGCTTCGACTCTGCTAATTTCCCTGGGGCTTTCAAGCT-----------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................ATTCGACTAATAAATTAATAACTAC............................................................................................................................................................................................................................................................................................................................25126.42770000571910000000000
..........................ATTCGACTAATAAATTAATAACTACG...........................................................................................................................................................................................................................................................................................................................26123.2539000038000100000000
...............ACGGATCATTTATTCGACTAATAAAT......................................................................................................................................................................................................................................................................................................................................26122.7533000000030210000000
.................................................................................................................................................................................................................................................................................................................................TTCGACTCTGCTAATTTCCCTGGGGC....................2612.00200000020000000000
..........................................................................................................................................................................................................TCTTGCGGC-GT-----CGAT--GGTTTAACTT....................................................................................................................................2512.00200000002000000000
.............................................................................................................................................................................................................................................................................................................TCGTAAATCAAGAATTTGGC..............................................2012.00200000000200000000
................................CTAATAAATTAATAACTACGT..........................................................................................................................................................................................................................................................................................................................21121.7521000002100000000000
..........................ATTCGACTAATAAATTAATAACTA.............................................................................................................................................................................................................................................................................................................................24121.6720000019000001000000
..........................ATTCGACTAATAAATTAAT..................................................................................................................................................................................................................................................................................................................................19121.5819000019000000000000
.....TTTGTTATTAACGGATCATTTATT..................................................................................................................................................................................................................................................................................................................................................2451.20600000010000050000
..........................................................................................................................................................................................................................................TCTTTTC------GGAACACCTTAA--ATAAG.....................................................................................................2411.00100100000000000000
............................................................................................................................................................................................................TTGCGGC-GT-----CGAT--GGTTTAACTTC...................................................................................................................................2411.00100010000000000000
...............................................................................................................................................................................................................................................................................................CATACAGCAAGTAATCGTAAATCAAGAA....................................................2811.00100000001000000000
...............................................................................................................................................................................................................................................TC------GGAACACCTTAA--ATAAGTTGCACAACC...........................................................................................2911.00100000001000000000
.................................................................................................................................................................................................................................................................................................TACAGCAAGTAATCGTAAATCAAGAATT..................................................2811.00100000010000000000
...............................................................................................................................................................................................................................................................................................CATACAGCAAGTAATCGTAAATCAAGAATT..................................................3011.00100000010000000000
..............................................................................................................................................................................................................................................TTC------GGAACACCTTAA--ATAAGT....................................................................................................2111.00100000010000000000
.....TTTGTTATTAACGGATCATTTAT...................................................................................................................................................................................................................................................................................................................................................2351.00500000000000041000
...................................................................................................................................................................................................TG-TCAATCTTGCGGC-GT-----CGAT--G.............................................................................................................................................2211.00100000000100000000
...................................................................................................................................................................................................TG-TCAATCTTGCGGC-GT-----CGAT--GGTT..........................................................................................................................................2511.00100000000010000000
..........................ATTCGACTAATAAATTAATAACTACGT..........................................................................................................................................................................................................................................................................................................................27120.831000000020008000000
...............ACGGATCATTTATTCGACTAATAAATT.....................................................................................................................................................................................................................................................................................................................................27120.67800000008000000000
....TTTTGTTATTAACGGATCATTTATT..................................................................................................................................................................................................................................................................................................................................................2550.60300000001020000000
.....TTTGTTATTAACGGATCATTTA....................................................................................................................................................................................................................................................................................................................................................2250.60300000000000021000
.............TAACGGATCATTTATTCGACTAATAAAT......................................................................................................................................................................................................................................................................................................................................2850.40200000001010000000
.....TTTGTTATTAACGGATCATTTATTG.................................................................................................................................................................................................................................................................................................................................................2550.40200000000000020000
...............ACGGATCATTTATTCGACTAATAAA.......................................................................................................................................................................................................................................................................................................................................25120.33400000003010000000
.......TGTTATTAACGGATCA........................................................................................................................................................................................................................................................................................................................................................1650.20100000010000000000
...TTTTTGTTATTAACGGATCATTTAT...................................................................................................................................................................................................................................................................................................................................................2550.20100000000010000000
....TTTTGTTATTAACGGATCATTT.....................................................................................................................................................................................................................................................................................................................................................2250.20100000010000000000
....TTTTGTTATTAACGGATCATTTAT...................................................................................................................................................................................................................................................................................................................................................2450.20100000010000000000
.....TTTGTTATTAACGGATCATTTATTA.................................................................................................................................................................................................................................................................................................................................................2550.20100000000000010000
T-GTTTTTGTTATTAACGGATCATTT.....................................................................................................................................................................................................................................................................................................................................................2550.20100000000000010000
.....TTTGTTATTAACGGATCATTT.....................................................................................................................................................................................................................................................................................................................................................2150.20100000010000000000
....TTTTGTTATTAACGGA...........................................................................................................................................................................................................................................................................................................................................................1650.20100000000001000000
..........................ATTCGACTAATAAATTAATAACTACGTA.........................................................................................................................................................................................................................................................................................................................28120.17200000020000000000
.........................TATTCGACTAATAAATTAATAACTACG...........................................................................................................................................................................................................................................................................................................................27120.08100000001000000000
..........................ATTCGACTAATAAATTAATAACT..............................................................................................................................................................................................................................................................................................................................23120.08100000010000000000
...............ACGGATCATTTATTCGACTAATAA........................................................................................................................................................................................................................................................................................................................................24120.08100000000010000000
.................GGATCATTTATTCGACT.............................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
..................GATCATTTATTCGACT.............................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
droSec2
T-TTTAC-------------------------------------------------------------------------GCATATAGTAACCAAATTGTTTCCAAATAGTCCAAATATTTCCAGCCAAAACGAGTTTGAGCTTCAAACCTAACGGAACTTTCTAAATATATAATTAAAGTTATGTAAAC----GTTTTCATTTGTGAAGC-GAAATTGCATGCATTTTAA---TTTCTGCATTCCAAAAGCAAAGTTCAAAGGCATCATACTTTCATTG-----------AGGA------------------------GCTTCGATTTAAATAATTTAAAATGGATTTTAAAGTATAAGTTATTTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
A-TTTAC-------------------------------------------------------------------------ACATAAAGTAACCAAACTGTCTCCAAATAGTCCAAATATTT----------CCAGTTTTTGCTTCAAACCTAACGGGTTTTTCTAAAAATAGAATTAAAGTTATGTACACGTACGTGTTCATTTGTGTAGC-GAAATTGCACACATTGTAA---TTTCTGCATTTCAAAAGCAAACTTCAAAGG---CATACTTTCAGTG-----------AGGA------------------------GCTTCGATTTAAATAATTTAAAATGGATTTTAAAGTAGAAGGTATTTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................TTCAAAGG---CATACTTTCAGTG-----------AGGA------------------------GC..............................................2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000200000000000000000111000000
.................................................................................................................................................................................................................................................................TCAAAGG---CATACTTTCAGTG-----------AGGA------------------------GC..............................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000001001000000
......................................................................................................................................................TAACGGGTTTTTCTAAAAATAGAATT...............................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................GAATTAAAGTTATGTACACGTACGTGT.........................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TAAAGTTATGTACACGTACGTGTT........................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TGTTCATTTGTGTAGC-GAAATTGCACA................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................CATAAAGTAACCAAACTGTCTCCAAA....................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................ATTTGTGTAGC-GAAATTGCACA................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TGTCTCCAAATAGTCCAAATATTT----------CCAGT.......................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CAAAGG---CATACTTTCAGTG-----------AGGA------------------------GC..............................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
...................................................................................................................................................................................................................................................................AAAGG---CATACTTTCAGTG-----------AGGA------------------------GC..............................................2412.0020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TCAAAGG---CATACTTTCAGTG-----------AGGA------------------------................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TCTCCAAATAGTCCAAATATTT----------CCAGT.......................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TAA---TTTCTGCATTTCAAAAGCAAACTTC............................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................ACCAAACTGTCTCCAAATAGTCCAAA...........................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TTGCTTCAAACCTAACGGGTTTTT.............................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TAAAGTTATGTACACGTACGTGT.........................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GG---CATACTTTCAGTG-----------AGGA------------------------GC..............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
.................................................................................................................................................................................................CGTGTTCATTTGTGTAGC-GAAATTGCA..................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TTTCAGTG-----------AGGA------------------------GCTTCGATTTAAA...................................2561.3380000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGTAA---TTTCTGCATTTCAAAAGCAAACT..............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GTGTTCATTTGTGTAGC-GAA........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................TGTACACGTACGTGTTCATTTGTGTAGC-...........................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................ATAGTCCAAATATTT----------CCAGTTTTTGC.................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GTGTTCATTTGTGTAGC-GAAATTGCA..................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GG---CATACTTTCAGTG-----------AGGA------------------------GCTTCGAT........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CGTGTTCATTTGTGTAGC-GAAATTGC...................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................TAGAATTAAAGTTATGTACACGTACGTGT.........................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AAAGG---CATACTTTCAGTG-----------AGGA------------------------GCT.............................................2511.0010000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................ACCAAACTGTCTCCAAATAGT................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TTTCAAAAGCAAACTTCAAAGG---CA..................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TACGTGTTCATTTGTGTAGC-...........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CACGTACGTGTTCATTTGTGTAGC-GA.........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......C-------------------------------------------------------------------------ACATAAAGTAACCAAACTGTCTCC.......................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TTTGCTTCAAACCTAACGGGTTTTTC............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................AAGTAACCAAACTGTCTCCAAATAGTC...............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................TGTCTCCAAATAGTCCAAATATTT----------CCAG........................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TTCAAAGG---CATACTTTCAGTG-----------AGGA------------------------GCT.............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AAAGG---CATACTTTCAGTG-----------AGGA------------------------GCTTC...........................................2711.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TAACCAAACTGTCTCCAAATAGTCCAAA...........................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TGTTCATTTGTGTAGC-GAAATTGCA..................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................TCAAAGG---CATACTTTCAGTG-----------AGGA------------------------G...............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TAAAATGGATTTTAAAGTAGAAGGTA....2671.0070000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000001120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................TTTTTCTAAAAATAGAATTAAAGTTATG......................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................T----------CCAGTTTTTGCTTCAAACCTAACGGG..................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTGTAA---TTTCTGCATTTCAAAAGCAAAC...............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AGTTATGTACACGTACGTGTT........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................ATTAAAGTTATGTACACGTAC.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................TTTTTGCTTCAAACCTAACGGGTTT...............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TTCAAAGG---CATACTTTCAGTG-----------AGGA------------------------................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TAAAGTTATGTACACGTACGT...........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GG---CATACTTTCAGTG-----------AGGA------------------------GCTTCGA.........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TTT----------CCAGTTTTTGCTTCAAACCTAA......................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................CAAACTGTCTCCAAATAGTCCAAATAT........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TCCAAATAGTCCAAATATTT----------CCAGT.......................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AAGG---CATACTTTCAGTG-----------AGGA------------------------................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CGTGTTCATTTGTGTAGC-GAAATTGCAC.................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TAAAGTAACCAAACTGTCTCCAAATAGTC...............................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TACACGTACGTGTTCATTTGT.................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTAC-------------------------------------------------------------------------ACATAAAGTAACCAAACTGTC..........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................ACGTACGTGTTCATTTGTGTAGC-GAA........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTCTGCATTTCAAAAGCA..................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................GCACACATTGTAA---TTTCTGCATTTCAAA......................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TACACGTACGTGTTCATTTGTGTAGC-...........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................TTTTTGCTTCAAACCTAACGGGTT................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................GTACACGTACGTGTTCATTTGTGTAGC-...........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TTTAAAATGGATTTTAAAGTAGAAGGTA....2870.8660000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000010010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................AATGGATTTTAAAGTAGAAGGTATT..2560.8350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TGGATTTTAAAGTAGAAGGTATT..2360.8350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TTCAGTG-----------AGGA------------------------GCTTCGATTTAAA...................................2460.6740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................................................................................................................................................................................................................................................................................TGGATTTTAAAGTAGAAGGT.....2070.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TAATTTAAAATGGATTTTAAAGTAGA.........2670.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TTTAAAATGGATTTTAAAGTAGAA........2470.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TAAAATGGATTTTAAAGTAGAAGG......2470.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AAATGGATTTTAAAGTAGAAGGTATT..2660.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TTTTGCTTCAAACCTAACGGGA.................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TACTTTCAGTG-----------AGGA------------------------GCTTCGATTTAAA...................................2860.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................TGTCTCCAAATAGTCCAAATATTT----------CCAGA.......................................................................................................................................................................................................................................2920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TTTCAGTG-----------AGGA------------------------GCTTCGATTTAAAT..................................2660.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................AGTG-----------AGGA------------------------GCTTCGATTTAAA...................................2170.4330000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TAAAATGGATTTTAAAGTAGA.........2170.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TG-----------AGGA------------------------GCTTCGATTTAAATAATT..............................2470.4330000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TAAAATGGATTTTAAAGTAGAA........2270.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TTTCAGTG-----------AGGA------------------------GCTTCGATTTAAATA.................................2760.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................CTTTCAGTG-----------AGGA------------------------GCTTCGATTTAAA...................................2660.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CAGTG-----------AGGA------------------------GCTTCGATTTAAATAATT..............................2770.2920000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCTTCGATTTAAATAATTTAAAATGGA.....................2770.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TG-----------AGGA------------------------GCTTCGATTTAAATAATTT.............................2570.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
...................................................................................................................................................................................................................................................................................................AGGA------------------------GCTTCGATTTAAATAAT...............................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TTTAAATAATTTAAAATGGAT....................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TTTAAAATGGATTTTAAAGTAGAAGGT.....2770.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TTAAAATGGATTTTAAAGTAG..........2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ATTTTAAAGTAGAAGGTATTT.2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TAAAATGGATTTTAAAGTAGAAGGT.....2570.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................GATTTAAATAATTTAAAA.........................18110.2730000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................CATACTTTCAGTG-----------AGGA------------------------GC..............................................1980.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................................................................................CTTTCAGTG-----------AGGA------------------------GCTTCGATTTAA....................................2560.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TCAGTG-----------AGGA------------------------GCTTCGATTTAAATAATT..............................2860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................................TAAATAATTTAAAATGGATTTTAAAGT............2760.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AAAAGCAAACTTCAAAGG---CAT.................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TGGATTTTAAAGTAGAAGGTAT...2260.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TAAAATGGATTTTAAAGTAGAAGGTATT..2860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................................................................................................................................................................................................................................................................................................TTAAAATGGATTTTAAAGTAGAAGGTA....2770.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TCGATTTAAATAATTTAAAATGGATT...................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CAGTG-----------AGGA------------------------GCTTCGATTTA.....................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TTAAAATGGATTTTAAAGTAGAAGGT.....2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................CATACTTTCAGTG-----------AGGA------------------------GCTTCGATT.......................................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TTTAAAATGGATTTTAAAGTAGAAG.......2570.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TAATTTAAAATGGATTTTAAAGTAGAAG.......2870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................G-----------AGGA------------------------GCTTCGATTTAAATAATTTAA...........................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TACTTTCAGTG-----------AGGA------------------------GCTTC...........................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................G-----------AGGA------------------------GCTTCGATTTAAAT..................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
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......................................................................................................................................................................................................................................................................................................A------------------------GCTTCGATTTAAATAATTTA............................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................ATTTAAAATGGATTTTAAAGT............2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
T-GTCTT--------------------------------------------------------------------------T--GTTATTGACGGATCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATCCGACTGACA-----------AATT------------------------AATACCTACGTAAGTATATATAATAAACT-------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..GTCTT--------------------------------------------------------------------------T--GTTATTGACGGATCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------T....................................................................................................2360.1711000000
droYak3
T-TAT-----------------------------------------------------------------------------GAAAATTAACCAGATTGTCCCAAAAATGCACAAATATGTGTATGGCAAAACCGTTTTGACT-TAATTCTAACGGGACATTCTAAAAATATAGTGTAAAGGGAGAACAA----CTGTTCATTTTTGCAGC-ACAGCGGAGTT--TTGATTGCTTTTCGTCGCAACGAAAGCGAATTTCAAAGTGGTCAAACGTGCGATT-----------CATA------------------------GGTCCAATTTTAATTATTTAAAATGAATTTTAAAGTTTCAGGTATTTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................GGAGTT--TTGATTGCTTTTCGTCGCA...........................................................................................................................25100.40404000000000
.........................................................................................................................................................................TATAGTGTAAAGGGAGAACAA----CT...........................................................................................................................................................................23140.21303000000000
.........................................................................................................................................................................TATAGTGTAAAGGGAGAACAA----CTG..........................................................................................................................................................................24140.21303000000000
.........................................................................................................................................................................TATAGTGTAAAGGGAGAACAA----CTGTT........................................................................................................................................................................26140.14201000010000
.........................................................................................................................................................................................................................GGAGTT--TTGATTGCTTTTCGTCGCAT..........................................................................................................................26100.10101000000000
............................................................................................................................................................................AGTGTAAAGGGAGAACAA----CTGTTCATT....................................................................................................................................................................27110.09101000000000
................................................................................................................................................................................TAAAGGGAGAACAA----CTGTTCATTTT..................................................................................................................................................................25110.09101000000000
....................................................................................................................................................TCTAACGGGACATTCTAAAAATATAGTG...............................................................................................................................................................................................28130.08100100000000
..........................................................................................................................................................................................................................GAGTT--TTGATTGCTTTTCGTCGC............................................................................................................................23130.08101000000000
...........................................................................................................................................................................TAGTGTAAAGGGAGAACAA----CTGTTCA......................................................................................................................................................................26140.07101000000000
.........................................................................................................................................................................TATAGTGTAAAGGGAGAACAA----CTGT.........................................................................................................................................................................25140.07101000000000
..........................................................................................................................................................................ATAGTGTAAAGGGAGAACAA----CTGT.........................................................................................................................................................................24140.07101000000000
.........................................................................................................................................................................TATAGTGTAAAGGGAGAACAA----CTGTTCA......................................................................................................................................................................28140.07100000010000
.........................................................................................................................................................................TATAGTGTAAAGGGAGAACAA----C............................................................................................................................................................................22140.07100000010000
............................................................................................................................................................................................................................GTT--TTGATTGCTTTTCGTCGC............................................................................................................................21140.07100000010000
...........................................................................................................................................................................................................TTTGCAGC-ACAGCGGAGTT--TTGATT........................................................................................................................................25160.06100000010000
...........................................................................................................................................................................................................TTTGCAGC-ACAGCGGAGTT--TTG...........................................................................................................................................22160.06100000010000
............................................................................................................................................................................................................TTGCAGC-ACAGCGGAGTT--TTGATT........................................................................................................................................24160.06100000010000
...........................................................................................................................................................................................................TTTGCAGC-ACAGCGGAGTT--TTGAT.........................................................................................................................................24160.06101000000000
...........................................................................................................................................................................................................TTTGCAGC-ACAGCGGAGTT--T.............................................................................................................................................20170.06100000010000
....................................................................................................................................................................................................GTTCATTTTTGCAGC-ACAGCGGA...................................................................................................................................................23180.06100000010000
droEug1
T-GT----------------------------------------------------------------------------ACGAAAAGTAAACAAACCGT-----TAATGTCCAAACTTCTCCATGGCAAACTAGATTTTTCTGGAAATCTGATGGTTTTTTCTAAAATTAGAATTGAAGCTGTGAACAC----GTGTCCATTTGCAAAGC-GCAGCTGCACGCATCGAGA---ATATTTCACAACAAAAGCGAACTTCAAAGTTTTCAGTCAACTAATT-----------ACGC------------------------TGCCCAATTTATAATATATAAAATGGATTTTAAAATTGAAGGTATT--SizeHit CountTotal NormTotal
No Reads
droBia1
T-TTTAA-------------------------------------------------------------------------GCAAAATTTATCGAAATTATCTATTAAAAGTCCAAACTTTTTTTTGGCATACCGGATTTTATTAGAAATCTAACGGTACTTTCTAAAAATAGATTTGCAATCCTGAACAC----GTGTTCATTTTGACAAC-GCAGTTGCGCT--TTGGAAGTTATTTCTATCTTTCAATTCGCCCTTTAAAGTGATCAGACTTACGCTA-----------AAGTGATCAGACG------------TATGCTCCGATTTGAATAATTTAACATTAATTATGAAATTGAAGGTATTTASizeHit CountTotal NormTotal
No Reads
droTak1
A-ATTA--------------------------------------------------------------------------TCGATAAGTAAACAAATTGTCTCAAAAATAACCAAGCTTTTTAATGGCAAACCGGAATTTTCTGGAAATCTAACGGGACTTTCTAAAAATATAACACAAAGTGTGAACAT----GTGTTCAATTTTGCAGC-GCAGCGGCGTT--ACGTTAGCATTTCGTCAAAACAAAGTTGCATTTCAATGTGGTCAAACTTTCACAA-----------GAGA------------------------GGGCCAAATTAGTTTATTTAAAATGAACCTTAAAGTTTCAGGTCTTTASizeHit CountTotal NormTotal
No Reads
droEle1
T-TTTAA-------------------------------------------------------------------------GCAAAATGTATCAAAATTGTCTCTTAAAAGTCCAAACTTCTCTTTGGCATACCGGATTTTACTAGAAATCTAACGGTACTTTCTAAAAATAGATTTGCAATCGTGAACAC----GTGTTCATTTTGGCAAC-GCAGCTGCGCT--TTGGAAGTTATTTCTCTCTTTCAATTCGCCCTTTAAAGTGATCAGACGTACGCTG-----------CAGT------------------------GCTCCGATTTGAATAATTTAACATGAATTATGAAATTGAAGGTATTTASizeHit CountTotal NormTotal
No Reads
droRho1
TATTTAA-------------------------------------------------------------------------GCAAAATGTAAAGAAATTTTCTCTTAAAAGTCTAAGCTTTTCTTTGGCATACCAGATTTTACTGGAAATCTAACGGTACTTTCTAAAAATAGCTTTGCAATCATGAACTG----GTGCTCATTTTTGCAAC-GCAGCTGCGCT--CAGAAAGTTGTTTCTCTAATTCAAATCACCCTTTAAAGAGT----------GCTT-----------GAGT------------------------GCTCGGAATTTAATTATTTAAAATGAACTTTGAAATTGAAGGTATATASizeHit CountTotal NormTotal
No Reads
droFic1
A-AATTT-------------------------------------------------------------------------ACGAAAAGTAAACAAATCGTTACTAAAATGTCCAAGCTTTTTCACTGCAAACTAGATTTTTCTGGAAATCTAACGGTTCTTTCTAAAAATATAATTGAAGCTGTGAAAAC----GTGTTCATTTGCAAAGC-GCATCTGAACGCATCGCGA---ATATTTCACAACAAAAGCGAACTTCAAAGTGTTCAGTCAACTAATT-----------ACGC------------------------TGCCCAATTTAAATTATATAAAATGGATTTTGAAGTTAAAGGTATT--SizeHit CountTotal NormTotal
No Reads
droKik1
A-ATTAG-------------------------------------------------------------------------TCAAAATGTGAAGAATTTGTCTCTAAATTGTCTATATTTTGTCATTGCAAACTAGTTTCTCCTGGAATTCTAACGGGACATTCTAAAAATAGAATGCAAAGTGTGAACAC----GTGTTCAATTTTGCTGCTGCAGGTGCGTT---AGTGAGCTTTTCGTCAAAACAAAAGTGAAGTTCAAAGTGGTCGGACGTTCGCAA-----------AAGT------------------------GCTCCAAATTTAATTATTTAAAATGCATTTTAAAGTTGAAGGTATT--SizeHit CountTotal NormTotal
No Reads
droAna3
A-TTG-T-------------------------------------------------------------------------GCGAAAAGTTAAGGAACTGTCTACACAATGTCCAAGTCTTTCAATGGCAAACCAGATTTTTCTGGAAATCTAAAGGGACTTTCTAAAAATAGAATGCAAAGCTTGTACAC----GTGTTCAGTTTTGCAGC-GCAGCGGCATT--AAGTTAACTCTTCGTCAAAACATCATTGGATTTCAAAGTGTTCAAACGTTCGTTG-----------GAGA------------------------GGTCCGAATTTTATTATTTAAAATAAATTTTAAAGTTGAAGGTATTTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................TACAC----GTGTTCAGTTTTGCAGC-GCAGC......................................................................................................................................................2780.383030000
.............................................................................................GAACTGTCTACACAATGTCCAAGTCT........................................................................................................................................................................................................................................................2680.252020000
.....................................................................................................................................................................................................................................TAACTCTTCGTCAAAACATCATTGGAT...............................................................................................................27130.152200000
.....................................................................................................................................................................................................TTCAGTTTTGCAGC-GCAGCGG....................................................................................................................................................21130.152001010
.....................................................................................................................................................................................................................................................................AGTGTTCAAACGTTCGTTG-----------GAGA------------------------GGT.............................................2680.131100000
........................................................................................................................................................................................GTACAC----GTGTTCAGTTTTGCAGC-GCA........................................................................................................................................................2680.131001000
..............................................................................................................................................................................TGCAAAGCTTGTACAC----GTGTTCAGT....................................................................................................................................................................2580.131100000
.....................................................................................AAGTTAAGGAACTGTCTACACAATGTC...............................................................................................................................................................................................................................................................2780.131010000
........................................................................................................................................................................................GTACAC----GTGTTCAGTTTTGCAGC-GCAGC......................................................................................................................................................2880.131100000
....................................................................................................................................................................................................................................................................AAGTGTTCAAACGTTCGTTG-----------GAGA------------------------................................................2480.131100000
................................................................................................................................................................................................................................................................TTCAAAGTGTTCAAACGTTCGTTG-----------GAGA------------------------................................................2880.131100000
.........................................................................................................................................................................................TACAC----GTGTTCAGTTTTGCAGC-GCAGCG.....................................................................................................................................................2880.131100000
.........................................................................................TAAGGAACTGTCTACACAATGTCCAAGTC.........................................................................................................................................................................................................................................................2980.131100000
.......................................................................................................................................................................................TGTACAC----GTGTTCAGTTTTGCAGC-GCAGC......................................................................................................................................................2980.131100000
..........................................................................................................................................................................................................................................................................TCAAACGTTCGTTG-----------GAGA------------------------GGTCCG..........................................2480.131100000
....................................................................................................................................................................................................................................................................AAGTGTTCAAACGTTCGTTG-----------GAGA------------------------GG..............................................2680.131100000
..........................................................................................................................................................................................................................................................................TCAAACGTTCGTTG-----------GAGA------------------------GGTCC...........................................2380.131100000
.....................................................................................................................................................................................................TTCAGTTTTGCAGC-GCAGCGGCATT--A.............................................................................................................................................2690.111010000
...................................................................................................................................................................................................TGTTCAGTTTTGCAGC-GCAGCGGCATT--..............................................................................................................................................2790.111100000
..........................................................................................................................................TTTCTGGAAATCTAAAGGGACTTT.............................................................................................................................................................................................................2490.111010000
.....................................................................................................................................................................................................TTCAGTTTTGCAGC-GCAGCGGCATT--..............................................................................................................................................2590.111100000
...........................................................................................................................................TTCTGGAAATCTAAAGGGACTTTC............................................................................................................................................................................................................2490.111001000
......................................................................................................................TTTCAATGGCAAACCAGATTTTTCT................................................................................................................................................................................................................................2590.111010000
.........................................................................................................CAATGTCCAAGTCTTTCAATGGCAAAC...........................................................................................................................................................................................................................................2790.111100000
.............................................................................................................................................................................................C----GTGTTCAGTTTTGCAGC-GCAGCGGCATT--..............................................................................................................................................2990.111010000
......................................................................................................................................................................................................TCAGTTTTGCAGC-GCAGCGGCAT.................................................................................................................................................2390.111100000
..............................................................................................................TCCAAGTCTTTCAATGGCAAACCAGA.......................................................................................................................................................................................................................................2690.111010000
........................................................................................................................................TTTTTCTGGAAATCTAAAGGGACTT..............................................................................................................................................................................................................2590.111010000
.................................................................................................................AAGTCTTTCAATGGCAAACCAGATTT....................................................................................................................................................................................................................................2690.111100000
......................................................................................................................................................................................................TCAGTTTTGCAGC-GCAGCGGCATT--AAGT..........................................................................................................................................2890.111100000
........................................................................................................................................TTTTTCTGGAAATCTAAAGGGACTTTC............................................................................................................................................................................................................2790.111010000
.....................................................................................................................................................................................................TTCAGTTTTGCAGC-GCAGCGGCATT--AA............................................................................................................................................2790.111100000
.....................................................................................................TACACAATGTCCAAGTCTTTCAATGGC...............................................................................................................................................................................................................................................2790.111010000
.....................................................................................................................................................................................................TTCAGTTTTGCAGC-GCAGCGGCA..................................................................................................................................................2390.111100000
...........................................................................................................................................................................................................TTTGCAGC-GCAGCGGCATT--AAGTTAACTC....................................................................................................................................29100.101100000
.............................................................................................................................................................................................................................................CGTCAAAACATCATTGGATTTCAAAGTG......................................................................................................28100.101100000
..............................................................................................................................................................................................................................T--AAGTTAACTCTTCGTCAAAACATCA.....................................................................................................................26120.081100000
..............................................................................................................................................................................................................................T--AAGTTAACTCTTCGTCAAAACATC......................................................................................................................25120.081010000
...........................................................................................................................................................................................CAC----GTGTTCAGTTTTGCAGC-GCAGCGGC...................................................................................................................................................28130.081010000
.......................................................................................................................................................................................................................................ACTCTTCGTCAAAACATCATTGGATT..............................................................................................................26130.081100000
.............................................................................................................................................................................................C----GTGTTCAGTTTTGCAGC-GCAGCGGC...................................................................................................................................................26130.081010000
.....................................................................................................................................................................................................TTCAGTTTTGCAGC-GCAGCGGC...................................................................................................................................................22130.081010000
......................................................................................................................................................................................................................................AACTCTTCGTCAAAACATCATTGGAT...............................................................................................................26130.081010000
.....................................................................................................................................................................................................................................TAACTCTTCGTCAAAACATCATTGGATT..............................................................................................................28130.081100000
.....................................................................................................................................................................................................................................TAACTCTTCGTCAAAACATCATTGG.................................................................................................................25130.081100000
...........................................................................................................................................................................................CAC----GTGTTCAGTTTTGCAGC-GCAGCGG....................................................................................................................................................27130.081100000
......................................................................................................................................................................................................TCAGTTTTGCAGC-GCAGCGG....................................................................................................................................................20130.081100000
...................................................................................................................................................................................................TGTTCAGTTTTGCAGC-GCAGCGGC...................................................................................................................................................24130.081100000
....................................................................................................................................................................................................................................TTAACTCTTCGTCAAAACATCATTGGATT..............................................................................................................29130.081100000
droBip1
T-TTTAA-------------------------------------------------------------------------GCAAAATGTATCAAAATTGTCTCATAAAAGTCCAAACTTCTCTTTGGCATACCGGATTTTACTAGAAATCTAACGGTACTTTCTAAAAATAGATTTGAAATCGTGAACAC----GTGTTCATTTTGGCAAC-GCAGCTGCGCT--TTGGAAGTTATTTCTCTCTTTCAATTCGCCCTTTAAAGTGATCAGACGTACGCTG-----------CAGT------------------------GCTCCGATTTGAATAATTTAACATGAATTATGAAATTGAAGGTATTTASizeHit CountTotal NormTotal
No Reads
dp5
T-TTG---------------------------------------------------------------------------ACAACATGTAACCATATCGTCTCATAAATGTCCAAACTTCTTTGTGGCAAACCGGATTT----------GCAACAGGACTTTCAAAAAATAGAATTGAAATGACGAACAC----ATGCTCACTTTTGCGAC-GTGTCTCTGCT--TTTTATGCTTTTGGTCAAAACAAAAGCGCACTTCAAAGTGATTACACGTTTGGCA-----------AAGT------------------------GTTCGAAGATTAATTATTTAAAATGGATTTTATAGTTGAAGGTATTTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................TCTCATAAATGTCCAAACTTCTTTG...................................................................................................................................................................................................................................................2521.5030000000300
.....................................................................................................TCATAAATGTCCAAACTTCTTTGT..................................................................................................................................................................................................................................................2421.0020200000000
......................................................................................................................................................................................................................................................................................................................................................TGGATTTTATAGTTGAAGGTA....2111.0010000000010
...............................................................................................................................................................................................................................................TCAAAACAAAAGCGCACTTCAAAG........................................................................................................2420.5010100000000
........................................................................................................TAAATGTCCAAACTTCTTTGTGGCAAACC..........................................................................................................................................................................................................................................2920.5010100000000
..............................................................................................................................................................................................................................................GTCAAAACAAAAGCGCACTTCAAAG........................................................................................................2520.5010100000000
......................................................................................................CATAAATGTCCAAACTTCTTT....................................................................................................................................................................................................................................................2120.5010100000000
..............................................................................................................TCCAAACTTCTTTGTGGCAAACCGGA.......................................................................................................................................................................................................................................2620.5010100000000
...................................................................................................TCTCATAAATGTCCAAACTT........................................................................................................................................................................................................................................................2020.5010100000000
...............................................................................................................................................................................................................................................................................CGTTTGGCA-----------AAGT------------------------GTTCGAAGAC......................................2320.5010100000000
............................................................................................................TGTCCAAACTTCTTTGTGG................................................................................................................................................................................................................................................1920.5010100000000
droPer2
T-TTG---------------------------------------------------------------------------ACAACATATAACCATGTCGTCTCATAAATGTCCAAACTTCTTTGTGGCAGACCGGATTTTTCCGAATTTGCAACGGGACTTTCTAAAAATAGAATTGAAATGATGAACAC----GTGTTCATTTTTACGAT-GCGTCTCTGTT--TTTTATGCTTTTTGTCAAAACAAAAGCGCACTTCAAAGTGATTAAACGTTTGGCA-----------AAGT------------------------GTTCGAAGACTAATTATTTAAAATGGATTTTGTAGTTAAAGGTATTTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................CGGGACTTTCTAAAAATAGAATTGAAA...........................................................................................................................................................................................2721.002020000
...................................................................................................................ACTTCTTTGTGGCAGACCGT........................................................................................................................................................................................................................................2011.001010000
...................................................................................................................................................................TAAAAATAGAATTGAAATGATGAACA..................................................................................................................................................................................2611.001100000
...........................................................................................................................................................................................................................TGTT--TTTTATGCTTTTTGTCAAAAC.........................................................................................................................2511.001010000
.................................................................................................................................................................................................................................................................................................................................................TAAAATGGATTTTGTAGTTAAAGG......2411.001010000
.........................................................................................................................................................CGGGACTTTCTAAAAATAGAATT...............................................................................................................................................................................................2340.502101000
...........................................................................................................................................................................................................................................TTTGTCAAAACAAAAGCGCACTTC............................................................................................................2440.502011000
...........................................................................................................................................................................................................................................TTTGTCAAAACAAAAGCGCACTT.............................................................................................................2340.251010000
.............................................................................................................................................................................................................................................TGTCAAAACAAAAGCGCACTTCAAAG........................................................................................................2640.251010000
droWil2
A-CTTGG-------------------------------------------------------------------------ACAAAACGAACACAAATTGACACTAAAATGTTCAATCTTCAAAACGCCAAACCGGGTTT-TCCGCAAATCTAACGGAACTTTCTAAAAATAGCATTGAAAGAATGAACTT----GTGTACATTTTTGCAGC-CCGTCTGAGCT--TTGTATGTACTTTGTCATTGCAAATTCGTACTTCAAAGTGATCAAACGTTTGACA-----------AAGT------------------------GGTCCGATATTAATAATTTAAAATGGATTTTGTAATTGAAGGTATTTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................TCGTACTTCAAAGTGATCAAACGTT............................................................................................2570.29202000
...............................................................................................................................................................................TGAAAGAATGAACTT----GTGTACATT....................................................................................................................................................................2480.25200020
.................................................................................................................AATCTTCAAAACGCCAAACCGGGT......................................................................................................................................................................................................................................2480.25202000
.........................................................................................................................................................................TAGCATTGAAAGAATGAACTT----GTG..........................................................................................................................................................................2480.25202000
....................................................................................................................................................................................................................................................................AAGTGATCAAACGTTTGACA-----------AAGT------------------------GG..............................................2650.20101000
.................................................................................................................................................................................................................................................................................................................................................TAAAATGGATTTTGTAATTGAAGGT.....2560.17100010
..........................................................................................................................................................................................................................................................................TCAAACGTTTGACA-----------AAGT------------------------GGTCCGA.........................................2560.17100010
...........................................................................................................................................................................................................................................................CGTACTTCAAAGTGATCAAACGTTTGA.........................................................................................2760.17101000
........................................................................................................................................................................................................................................TACTTTGTCATTGCAAATTCGTACT..............................................................................................................2570.14110000
.........................................................................................................................................................................................................................................................TTCGTACTTCAAAGTGATCAAACGT.............................................................................................2570.14101000
.....................................................................................................................................................................................................TACATTTTTGCAGC-CCGTCTGAGCT--T.............................................................................................................................................2670.14101000
...................................................................................................................................................................................................................................................TGCAAATTCGTACTTCAAAGTGATCA..................................................................................................2670.14101000
..........................................................................................................................................................................................................TTTTGCAGC-CCGTCTGAGCT--TTGTA.........................................................................................................................................2570.14101000
....................................................................................AACGAACACAAATTGACACTAAAATG.................................................................................................................................................................................................................................................................2670.14101000
......................................................................................CGAACACAAATTGACACTAAAATGT................................................................................................................................................................................................................................................................2570.14101000
..........................................................................................................................................................................AGCATTGAAAGAATGAACTT----GTGTAC.......................................................................................................................................................................2680.13100010
...............................................................................................................TCAATCTTCAAAACGCCAAACCGGG.......................................................................................................................................................................................................................................2580.13101000
..............................................................................................................................................CGCAAATCTAACGGAACTTTCTAAA........................................................................................................................................................................................................2580.13101000
..........................................................................................................................................................................AGCATTGAAAGAATGAACTT----GTGTACAT.....................................................................................................................................................................2880.13101000
...............................................................................................................................................................................TGAAAGAATGAACTT----GTGTACATTTT..................................................................................................................................................................2680.13100010
.........................................................................................................................................................................TAGCATTGAAAGAATGAACTT----GTGTA........................................................................................................................................................................2680.13101000
.........................................................................................................................................................................................AACTT----GTGTACATTTTTGCAGC-CC.........................................................................................................................................................2480.13101000
.........................................................................................................................................................................................AACTT----GTGTACATTTTTGCAGC-CCG........................................................................................................................................................2580.13101000
.............................................................................................................................................................................................T----GTGTACATTTTTGCAGC-CCGTCTG....................................................................................................................................................2580.13100010
droMoj3
G-------------------------------------------------------------------------------ACAAAACCCACACAAATTGTGTCGTAAATGTCCAAACTATTTAATGGCAAACCGTTTTTTTGCGGGAATCTAACGGGA-TTTCTAAAAATAGCATTGAAAGCTACAACAC----TTGTTAAATGTTGCAAT-TTTTCGCAGCG--AAGAGAATTTTTTATTACACCAAAAGCAAACTTTAAAGTGGTAAAACGTTTGATT-----------GAGT------------------------GGTCCAAATTTAATTATTTAAAATGGTATTTAGAGTTGAAGGTATTTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................TACACCAAAAGCAAACTTTAAAG........................................................................................................2380.383200010
................................................................................................................................................................................................................................................TACACCAAAAGCAAACTTTAAAGTGG.....................................................................................................2680.252200000
..................................................................................................................AACTATTTAATGGCAAACCGTTTTT....................................................................................................................................................................................................................................2590.222100010
.............................................................................................................GTCCAAACTATTTAATGGCAAACC..........................................................................................................................................................................................................................................24100.202200000
..............................................................................................................................................................................................................................................ATTACACCAAAAGCAAACTTT............................................................................................................2180.131000010
..............................................................................................................................................................................................................................................ATTACACCAAAAGCAAACTTTAAAGTGG.....................................................................................................2880.131100000
..........................................................................................................................................................................................................................................TTTTATTACACCAAAAGCAAACT..............................................................................................................2380.131000010
..............................................................................................................................................................................................................................................ATTACACCAAAAGCAAACTTTAAAG........................................................................................................2580.131100000
..................................................................................................................AACTATTTAATGGCAAACCGTTTTTTT..................................................................................................................................................................................................................................2780.131100000
..................................................................................................................AACTATTTAATGGCAAACCGTTTT.....................................................................................................................................................................................................................................2490.111100000
............................................................................................................................................................................................................................................................................AAACGTTTGATT-----------GAGT------------------------GGTCC...........................................2190.111000010
................................................................................................................................................................................................................................................................................GTTTGATT-----------GAGT------------------------GGTCCAAATTT.....................................2390.111100000
...................................................................................................................ACTATTTAATGGCAAACCGTTTTTC...................................................................................................................................................................................................................................2590.111100000
..................................................................................................................AACTATTTAATGGCAAACCGTTTTTC...................................................................................................................................................................................................................................2690.111100000
................................................................................................................................................................................................................................................................................GTTTGATT-----------GAGT------------------------GGTCCAAATT......................................2290.111000010
................................................................................................................................................................................................................................................................................GTTTGATT-----------GAGT------------------------GGTCCAAAT.......................................2190.111100000
...................................................................................................................................................................................................................................................................AAAGTGGTAAAACGTTTGATT-----------GAGT------------------------GG..............................................2790.111000001
..............................................................................................................TCCAAACTATTTAATGGCAAACCG.........................................................................................................................................................................................................................................24100.101100000
........................................................................................................TAAATGTCCAAACTATTTAATGGCA..............................................................................................................................................................................................................................................25100.101100000
.............................................................................................................GTCCAAACTATTTAATGGCAAACCGTT.......................................................................................................................................................................................................................................27100.101000010
...............................................................................................................CCAAACTATTTAATGGCAAAC...........................................................................................................................................................................................................................................21100.101000010
.............................................................................................................GTCCAAACTATTTAATGGCAAACCG.........................................................................................................................................................................................................................................25100.101100000
.................................................................................................................................................................................................................................................................................TTTGATT-----------GAGT------------------------GGTCCAAATTT.....................................22100.101100000

Generated: 05/19/2015 at 05:33 AM