ID:dsi_17537 |
Coordinate:3r:10164156-10164206 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_10163986_10164155_+]; CDS [3r_10163986_10164155_+]; CDS [3r_10164207_10164333_+]; exon [3r_10164207_10164333_+]; intron [3r_10164156_10164206_+]
No Repeatable elements found
| ##################################################---------------------------------------------------################################################## CAAAGGTAACGATGCGTTGGCATCCACAGGATGTGCTTATTGTGACCAAGGTAGGAGTTATATCGTAACCAAAACAGAAGTAATTTTAAGATCTCTTTAAGATGTTATGCAGCTGCCAAACGATTTCTGAAGCATCCAGCACTTGGTTAGT **************************************************....(((((((.((............)).)))))))...............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553485 Chicharo_3 day-old ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................CAAACGATTTCTGAAGCATCCAGCACT........ | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...............................TGTGCTTATTGTGACCAAGATGT................................................................................................. | 23 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ......................TCCACAGGATGTGCTTATTGTGACCAAGA.................................................................................................... | 29 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................TCCACAGGATGTGCTTATTGTGACCAAGG.................................................................................................... | 29 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...........ATGCCTTGGCATGCACAGG......................................................................................................................... | 19 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 |
| ............TGCGTTGACATCTACAGG......................................................................................................................... | 18 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 1 | 0 |
| .............GCGTTGATATCCACAGGA........................................................................................................................ | 18 | 2 | 6 | 0.17 | 1 | 0 | 1 | 0 | 0 | 0 |
| .............GCGTTGATATCCACAGG......................................................................................................................... | 17 | 2 | 13 | 0.15 | 2 | 0 | 2 | 0 | 0 | 0 |
| ......................................................................................................................AAGGATTTCTGAAGC.................. | 15 | 1 | 20 | 0.10 | 2 | 2 | 0 | 0 | 0 | 0 |
| ...............GTTGGCATGCACAGG......................................................................................................................... | 15 | 1 | 13 | 0.08 | 1 | 0 | 0 | 0 | 1 | 0 |
| .....................................................................................CTGAGATCTCTTTAAGA................................................. | 17 | 2 | 15 | 0.07 | 1 | 0 | 0 | 0 | 0 | 1 |
| ......................................................................................TAAGATCTCTGAAAGAT................................................ | 17 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................TGCTATCGTAACCAAAA............................................................................. | 17 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 |
| ..........................................................................................................ATGGAGCTGCCAAAC.............................. | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 |
|
GTTTCCATTGCTACGCAACCGTAGGTGTCCTACACGAATAACACTGGTTCCATCCTCAATATAGCATTGGTTTTGTCTTCATTAAAATTCTAGAGAAATTCTACAATACGTCGACGGTTTGCTAAAGACTTCGTAGGTCGTGAACCAATCA
**************************************************....(((((((.((............)).)))))))...............************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
M025 embryo |
|---|---|---|---|---|---|---|---|---|
| ....CCATTGCTTCGCGACCGTA................................................................................................................................ | 19 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................CACCGGTTCCATCCTGA............................................................................................. | 17 | 2 | 7 | 0.14 | 1 | 0 | 1 | 0 |
| .......................................................................................................CAATAGGACGACGGTTCGCT............................ | 20 | 3 | 15 | 0.07 | 1 | 1 | 0 | 0 |
| ..........................................................................................................................TGAAGACTATGTAGGTCGT.......... | 19 | 3 | 15 | 0.07 | 1 | 0 | 1 | 0 |
| ..............................................................................................................TCGACAGTTTGCTAATAAC...................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 |
| ...........................................................................................................................GAAGACTACGGAGGTCGT.......... | 18 | 3 | 20 | 0.05 | 1 | 0 | 1 | 0 |
Generated: 04/24/2015 at 10:34 AM