ID:

dsi_1753

 Coordinate:

2r:14118226-14118375 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.5 -11.4 -11.0 -10.9

Flybase annnotation

CDS [2r_14118376_14119077_-]; exon [2r_14118376_14119158_-]; intron [2r_14117985_14118375_-]

Repeatable elements

NameClassFamilyStrand
(ATTG)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGCTCAAGGAGATCCTGGAGGAGTCCCAGAAGCAGATTGATATGCCACAGGTTAGTTAACATTCCGCTAATAATCAATCAATCAATCAATCAAAATCGATCGATATTGAAGGCATAAAGAAACTTTATAATGGGTTAGCAGGGCTTTAACTGATTTATTACTCTTTCCATTATCACACAATCGGAAGTTATACATATATGTACCACTTACCCTGATAAAAGAAATGTTGTAAATTCAGAAATATCATTAT
**********************************************************************************************((....((((..(((......(((((........(((.(((((((...)))..)))).)))......)))))......)))....))))......))*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 O002
Head
 SRR553488
RT_0-2 hours eggs
.GCTCAAGGAGATCCTGGAGGA.................................................................................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0
.............................................................................................................................................................................CACACAATCGGAAGTTAT........................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................................TATCACACAATCGGAAGTT............................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0
.GCTCAAGGAGATCCTGGAGG..................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................GCAGATTGATATGCCACAGGTCAAC.................................................................................................................................................................................................. 25 3 1 1.00 1 0 1 0 0 0 0 0 0
...TCAAGGAGATCCTGGAGGAGTCCCAGAA........................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
.......GGAGATCCTGGAGGAGTCCCAGA............................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0
....CAAGGAGATCCTGGAGGAGTC................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................AAAATCGATCGATATTGAAGAC......................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................ATCACACAATCGGAAGTT............................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
......................GTCCCAGAAGCAGATTGA.................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
..CTCAAGGAGATCCTGGAGGA.................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
AGCTCAAGGAGATCCTGGAGG..................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................................ATCGATCGATATTGAAGG.......................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
...TCAAGGCGATCCTGGAGGAGTCCCAGA............................................................................................................................................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................CACACAATCGGAAGTTATAC......................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................CACACAATCGGAATTTATAC......................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................ATGGGTTAGCAGGGCTTTAACC................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0
....CAAGGAGATCCTGGAGGA.................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................ATCACACAATCGGAAGTTATAC......................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................TCCCAGAAGCAGATTGATATGCCAC.......................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................................................................ATAAAGAAACTTTATAATGGGTTAGCAG............................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................TCGACCGATATTGAA............................................................................................................................................ 15 1 5 0.20 1 0 0 0 1 0 0 0 0
...................................................................................................................AAAGAACCTTTATAATGC..................................................................................................................... 18 2 12 0.08 1 0 0 0 0 0 0 1 0
............................................................................................AACTTGGTCGATATTGAAGG.......................................................................................................................................... 20 3 14 0.07 1 0 0 0 0 1 0 0 0
.......GGAGATCCGGGAAGAGT.................................................................................................................................................................................................................................. 17 2 18 0.06 1 0 0 0 0 0 1 0 0
..............................................................................................ATCGATCGATAGTGA............................................................................................................................................. 15 1 18 0.06 1 0 0 0 0 0 0 0 1
.............................................................................................AATCGACCGATAGTGAA............................................................................................................................................ 17 2 19 0.05 1 0 0 0 0 1 0 0 0
.......AGAGATCCTGGAGGACT.................................................................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 1 0 0
..............................AGCAGATTGATAGGCT............................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 1 0 0 0

Anti-sense strand reads

TCGAGTTCCTCTAGGACCTCCTCAGGGTCTTCGTCTAACTATACGGTGTCCAATCAATTGTAAGGCGATTATTAGTTAGTTAGTTAGTTAGTTTTAGCTAGCTATAACTTCCGTATTTCTTTGAAATATTACCCAATCGTCCCGAAATTGACTAAATAATGAGAAAGGTAATAGTGTGTTAGCCTTCAATATGTATATACATGGTGAATGGGACTATTTTCTTTACAACATTTAAGTCTTTATAGTAATA
***********************************************************((....((((..(((......(((((........(((.(((((((...)))..)))).)))......)))))......)))....))))......))********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553488
RT_0-2 hours eggs
........................................................................TAGTTAGTTAGTTAGTTAG............................................................................................................................................................... 19 0 20 6.10 122 73 37 0 11 0 1 0
................CCTCCTCAGGGTCTTCGTCTA..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
......................................................................ATAAGTGAATTAGTTAGTTAGTTTT........................................................................................................................................................... 25 3 1 1.00 1 0 0 1 0 0 0 0
........................................................................TAGTTAGTTAGTTAGTTAGT.............................................................................................................................................................. 20 0 20 0.55 11 7 1 0 0 0 3 0
........................................................................TAGTTAGTTAGTTAGTTA................................................................................................................................................................ 18 0 20 0.55 11 7 4 0 0 0 0 0
.............................................................................AGTTAGTTAGTCATTTTTAGGT....................................................................................................................................................... 22 3 3 0.33 1 0 0 1 0 0 0 0
.....................................................................................................................................................................AGGTAATAGTGTGTT...................................................................... 15 0 7 0.29 2 0 0 0 0 2 0 0
.........................................................................AGTTAGTTAGTTAGTTAG............................................................................................................................................................... 18 0 20 0.20 4 3 0 0 1 0 0 0
........................................................................TAGTTAGTTAGTTAGTTAGTT............................................................................................................................................................. 21 0 10 0.10 1 1 0 0 0 0 0 0
.......................................................................TTAGTTAGTTAGTTAGTT................................................................................................................................................................. 18 0 20 0.05 1 0 0 1 0 0 0 0
........................................................................TAGTTAGCTAGTTAGTTAG............................................................................................................................................................... 19 1 20 0.05 1 0 0 0 1 0 0 0
.................................................CCAAGCACGTGTAAGGCGA...................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0
............................................................................TAGTTAGTTAGTTAGTT............................................................................................................................................................. 17 0 20 0.05 1 0 0 0 0 0 0 1
........................................................................TAGTTAGTTAGTTAGTT................................................................................................................................................................. 17 0 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:14118176-14118425 - dsi_1753 AGCTCAAGGA---GATCCTGGAGGAGTCCCAGAAGCAGATTGATATGCCACAGGTTAGTTAACATTCCGCTAATA---ATCAAT-----------CAATCAATCAATCAAAATCGA-----TCG--ATATTGAAGGCATAAAGAAACTT-----------------------------------------TATAATGGGTTAGC-------------------AGGG------------------------------------CTTTAACTGATTTATTACTCTTTCCATTATCACACAATCGGAAGTT---ATACATATATGT-----ACC-AC-----------------------TTACCCTGATAAAAG--------AAA----------TGTTGT----AAATTCAGAA---ATA------------------------------------------------------------------------------------------------------------TCATTAT
droSec2 scaffold_1:10970044-10970287 - AGCTCAAGGA---GATCCTGGAGGAGTCCCAGAAGAAGATTGATATGCCACAGGTTAGTTAACATTCCGCTAATA---ATCAAT-----------C----AATCAATCAAAATCGA-----TCG--ATATTGAAGGCATAAAGAAACTT-----------------------------------------TATAATGGGTTAGC-------------------AGGG------------------------------------CTTTAACTGATTTATTACTCTTTCCATTATCACACAATCGGAAGTT---ATACATATATGT---------AC-----------------------TTACCCTGATAAAAA--------AAA---------GTGTTGT----TTATTCAGAA---ATA------------------------------------------------------------------------------------------------------------TCATTAT
dm3 chr2R:13470551-13470796 - AGCTCAAGGA---GATCCTGGAGGAGTCCCAGAAGCAGATTGATATGCCACAGGTTAGTTAACATTCCACTAATA---ATCAAT-----------C----AATCAATCAAAATCGA-----TCG--ATATTGAAGGCATAAAGAAACTT-----------------------------------------TATAAAGGGTTCGC-------------------AGGG------------------------------------CTTTAACAGATTTATTACTCTTTCCATTATCACACAATCGGAAGTG---ATACATACATAT---------AC-----------------------TTACCCTGATAAAAG--------AAA----------TGTTGT----AAATTCAGATAGTATA------------------------------------------------------------------------------------------------------------TAATATT
droEre2 scaffold_4845:7698893-7699235 - AGCTTAAGGA---GATCCTGGACGAGTCCCAGAAGCAGATTGATATGCCAAAGGTTAGTTAACATTCCGCTAATT---ATC-----------------------AATCAAAATCGG-----TCG--ATGTTAAACACAAGGAGA---------------------------------CCTTGGCCAACTTTATTATGGGTTCAC-------------------AGTG------------------------------------TTTTAACAGTTTTATTACTTTTTCGATTATAACAAATTCGGAAGTT---ATA--------T---------TC-----------------------TTACCCTGATAAAAG--------AAA----------CGTTGT----AAATTCAAAA---ATAACAAATTGCATTTAAATATTTTCAGTCAGTAAGGATTTTAATAGCTTCAGATATGTGAAAATTACATTTAAGCCTACGACTTTTTAAAACAAAAGTTATTTAACGAAATAATGCT
droYak3 2R:15714898-15715169 + AGCTCAAGGA---GATCCTGGAGGAGTCCCAGAAGCAAAGTGATATGCCCAAGGTTAGTTAACATTCCTCTAGT------CAAT-----------CAGTC-ATCAATCAAAATCGA-----TCG--ATATTAAAGACATAATGGAAAT-AGTTATAATTTGTATCGCAAAAGGGAGACCTTGACCGACTGTATT------------------------------------------------------------------------------ATTTATTACTTTTTCCATTATCACATAATCGGAAGTT---ATA--------T---------AG-----------------------TTACCCTGATAAAAG--------AAA----------CGTTGT----AAATTCAGAA---TTATCACATTGAATCTAAATAACT----------------------------------------------------------------------------------------TCGCTT
droEug1 scf7180000409672:1639425-1639640 + AGCTAAAAGA---GATCCTGGAGGAGTCCCAAAAGCAGAATGATTTGCCCCAGGTACGTAGATATTTAAGTAATA---ATTCCT----------------AGTCAATCTAAGTCGAAGCATTAA--ATATTAATATCATTGAAGAAACTACTT-------------------------------------TAAATTTGTT----------------TTTCAAATTGGAGT---------------------------------CTTTAATT-----------------------------------------------TAAATT-----ATA-AA-----------------------TTATTATTAATTAAT--------AAT----------TATTAT----AATTTTAAAA---CTA------------------------------------------------------------------------------------------------------------TTATCTT
droBia1 scf7180000301754:5721759-5721818 - AGCTGAAGGA---GATCCTGGAGGAGTCCCAGAAGCAGAGTGATCAGCCCCAGGTGAGTAAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415138:263415-263523 + AGCTCAAGGA---GATCCTGGAGGAGTCCCAGAAGCAGACTGATGCGCCCAAGGTTCGTAGCCACTTGAGTAAAT---ATTCCA----------------AGCTGATTATAATTGAAGTACTAAGC-------------------------------------------------------------------------------------------------------------------TGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491214:808349-808646 + AGCTCAAGGA---GATCCTGGAGGAGTCCCAGAAGCAGAGTGATGCACCAAAGGTGAGAAAATAATAGAGAGGCAATTAAGATTGCACAGGCAACAAG----------------------------ATATT-----------GAAATCT-----------------------------------------TTTAAGGGGTTAGTTGTATATTTTAATTTTAAATTAAAGCTTTTCTTCCAATACAACATGCAAATAAAATTAGGTTAAACAAATTTATAGGTTAATC---------------AAAT------------TAAGTT-----ATTTAATTATCGAAAAAAAGTCAGCATTGGTAAGCTTATAAAAA--------TAA----------CGTATT----A-------------TTTCACACCAAATTTAAATATTT---------------------------------------------------------------------------------------GTATTAT
droRho1 scf7180000778035:71218-71470 + AGCTCAAGGA---GATCATGGAGGAGTCCCAGAAGCAGATTGATATGCCAAAGGTTCGTAAATACTACATAGCC-ATAAAGAATGCACAGTCAAGAAG----------------GCTGCAAAGT--ATATTAATAT--------------------------------------------------------------G----TTTTGTAATTCAATTTCAAATTGAAGC----------------------------------------AGAT---------CTTCTAATATAAAACAGCCTGAATTTGACATTCAGATATGAAGAGGAAA-AC-----------------------TCACTATGATAAAATTTATTTAAAAACAGGCAAAACTCCTGT----T------TAA---ATT------------------------------------------------------------------------------------------------------------TTACAAT
droFic1 scf7180000453948:1983078-1983133 + AGCTAAAGGA---AATCTTTGAGGAGTCCCAGAGGCAGAGTGATTTGCCGAAGGTTTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302476:3293906-3294134 - AGTTCAAGGA---GATTATGGAGGAGACCCAGAGGCAGAATGACCAACCCAAGGTATGTATT----TAAGAGTTC---ATTTAA----------------AGGTTCATATGATCAGGGAACTGAAAATAATA--AA--------------------------------------------------------------A----TATTCAATTTGAATGTCCGTTAGG------------------------------------C----CCAGCTTTCTTAACCTTGCCAGAGTCATGAAA--------------------------------------------ATAATTCAGCTT--TCTTTATCTTTATATTTATTTATACT----------CCTTATCAGTA------A---GTGTC-----------------------------------------------------------------------------------------------------------ATGTCATT
droAna3 scaffold_13266:11385938-11385998 - AGCTCAAGGA---GATCCTGGAGGAGTCCCAAAGGCAAAATGATCAGGAAAAGGTAAG----CATTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396547:1078874-1078928 + AGCTGAAGGA---GATTATCGAGGAGTCCAAAAGGCAAAACGATCAGGAAAAGGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 2:17596937-17597009 + AGATGCGGCAACTGATGCTCGAGGGAA-CGAGAAGCGAACTAGCACTCCAGCAGAACATTA---------------------------------------------------------TGCTCGGA-------------------------------------------------------------------------------------------------------------------TTCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_0:11447707-11447779 + AGATGCGGCAACTGATGCTCGAGGGAA-CGAGAAGCGAACTAGCACTCCAGCAGAACATTA---------------------------------------------------------TGCTCGGA-------------------------------------------------------------------------------------------------------------------TTCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004382:426815-426854 - AATTAAAAGA---AATCCTTGAGGAAACGGAAAAAAACAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:11189379-11189433 - AGCTCAAGGA---AATTCTCGAGGAGACAAACAAGAATGCGGATGAGCCCAAGGTCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:15742826-15742880 + AGCTCAACGA---AATTCTGGAGGAGACCAACAAGAGCACGGATGAGCCCAAGGTCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:13548571-13548622 + AGCTCAATGA---AATGATGGAGGCGAGCAACAAGGGAGTCGATGAGCCCAAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AGCTCAAGGA---GATCCTGGAGGAGTCCCAGAAGCAGATTGATATGCCACAGGTTAGTTAACATTCCGCTAATA---ATCAAT-----------CAATCAATCAATCAAAATCGA-----TCG--ATATTGAAGGCATAAAGAAACTT-----------------------------------------TATAATGGGTTAGC-------------------AGGG------------------------------------CTTTAACTGATTTATTACTCTTTCCATTATCACACAATCGGAAGTT---ATACATATATGT-----ACC-AC-----------------------TTACCCTGATAAAAG--------AAA----------TGTTGT----AAATTCAGAA---ATA------------------------------------------------------------------------------------------------------------TCATTATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.GCTCAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200020000000000000
.....................................................................................................................................................................................................................................................................................................CACACAATCGGAAGTT---AT.............................................................................................................................................................................................................................1812.00202000000000000000
..................................................................................................................................................................................................................................................................................................TATCACACAATCGGAAGTT---...............................................................................................................................................................................................................................1912.00202000000000000000
.GCTCAAGGA---GATCCTGGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...TCAAGGA---GATCCTGGAGGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.......GGA---GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
....CAAGGA---GATCCTGGAGGAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...................................................................................................................................................................................................................................................................................................ATCACACAATCGGAAGTT---...............................................................................................................................................................................................................................1811.00101000000000000000
.........................GTCCCAGAAGCAGATTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..CTCAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
AGCTCAAGGA---GATCCTGGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...............................................................................................................ATCGA-----TCG--ATATTGAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.....................................................................................................................................................................................................................................................................................................CACACAATCGGAAGTT---ATAC...........................................................................................................................................................................................................................2011.00101000000000000000
..................................................................................................................................................................................................ATGGGTTAGC-------------------AGGG------------------------------------CTTTAACC........................................................................................................................................................................................................................................................................2211.00101000000000000000
....CAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
...................................................................................................................................................................................................................................................................................................ATCACACAATCGGAAGTT---ATAC...........................................................................................................................................................................................................................2211.00101000000000000000
..........................TCCCAGAAGCAGATTGATATGCCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001000000000000
.........................................................................................................................................ATAAAGAAACTT-----------------------------------------TATAATGGGTTAGC-------------------AG......................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
droSec2
AGCTCAAGGA---GATCCTGGAGGAGTCCCAGAAGAAGATTGATATGCCACAGGTTAGTTAACATTCCGCTAATA---ATCAAT-----------C----AATCAATCAAAATCGA-----TCG--ATATTGAAGGCATAAAGAAACTT-----------------------------------------TATAATGGGTTAGC-------------------AGGG------------------------------------CTTTAACTGATTTATTACTCTTTCCATTATCACACAATCGGAAGTT---ATACATATATGT---------AC-----------------------TTACCCTGATAAAAA--------AAA---------GTGTTGT----TTATTCAGAA---ATA------------------------------------------------------------------------------------------------------------TCATTATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020200
.GCTCAAGGA---GATCCTGGAGGAGTCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020200
.GCTCAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..CTCAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
..........................................................................................................................................................................................................................................................................................CTTTCCATTATCACACAATCGGA......................................................................................................................................................................................................................................2311.0010100
.......................GAGTCCCAGAAGAAGATTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.....AAGGA---GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
........GA---GATCCTGGAGGAGTCCCAGAAGAAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
......................................ATTGATATGCCACAGGTTAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..............................................................................................................................................................................................................................................................................................................................................C-----------------------TTACCCTGATAAAAA--------AAA---------GT............................................................................................................................................2111.0011000
................CCTGGAGGAGTCCCAGAAGAAGATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.........................GTCCCAGAAGAAGATTGATATGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
..............................AGAAGAAGATTGATATGCCACAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
.....................................................................................................................................................................................................................................................................................................CACACAATCGGAAGTT---ATAC...........................................................................................................................................................................................................................2011.0011000
................................................................................................................................................................................................................................................................................................................................................................................AAAAA--------AAA---------GTGTTGT----TTATTCAGA..........................................................................................................................2411.0010100
.........................GTCCCAGAAGAAGATTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
dm3
AGCTCAAGGA---GATCCTGGAGGAGTCCCAGAAGCAGATTGATATGCCACAGGTTAGTTAACATTCCACTAATA---ATCAAT-----------C----AATCAATCAAAATCGA-----TCG--ATATTGAAGGCATAAAGAAACTT-----------------------------------------TATAAAGGGTTCGC-------------------AGGG------------------------------------CTTTAACAGATTTATTACTCTTTCCATTATCACACAATCGGAAGTG---ATACATACATAT---------AC-----------------------TTACCCTGATAAAAG--------AAA----------TGTTGT----AAATTCAGATAGTATA------------------------------------------------------------------------------------------------------------TAATATTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.GCTCAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000200000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.GCTCAAGGA---GATCCTGGAGGAGTCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000000000000000000000000000000000000000010000000000000000000000001000010000000
.GCTCAAGGA---GATCCTGGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................AGTCCCAGAAGCAGATTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000101000000
.........................GTCCCAGAAGCAGATTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000
AGCTCAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
AGCTCAAGGA---GATCCTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...TCAAGGA---GATCCTGGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AATCGGAAGTG---ATACATACATAT---------A.........................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCAAGGA---GATCCTGGAGGAGTCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.GCTCAAGGA---GATCCTGGAGGAGTCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....CAAGGA---GATCCTGGAGGAGTCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................GCAGATTGATATGCCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GTCCCAGAAGCAGATTGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....AAGGA---GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.GCTCAAGGA---GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................ATTGAAGGCATAAAGAAACTT-----------------------------------------T........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CCAGAAGCAGATTGATATGCCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGCTCAAGGA---GATCCTGGAGGAGTCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....CAAGGA---GATCCTGGAGGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......AGGA---GATCCTGGAGGAGTCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GA---GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....CAAGGA---GATCCTGGAGGAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................T-----------------------------------------TATAAAGGGTTCGC-------------------AGGG------------------------------------CT..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....CAAGGA---GATCCTGGAGGAGTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................ATCGA-----TCG--ATATTGAAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..............ATCCTGGAGGAGTCCCAGAAGCAGATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................AGTCCCAGAAGCAGATTGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................AATCGA-----TCG--ATATTGAAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.GCTCAAGGA---GATCCTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATCCTGGAGGAGTCCCAGAAGCAGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
droEre2
AGCTTAAGGA---GATCCTGGACGAGTCCCAGAAGCAGATTGATATGCCAAAGGTTAGTTAACATTCCGCTAATT---ATC-----------------------AATCAAAATCGG-----TCG--ATGTTAAACACAAGGAGA---------------------------------CCTTGGCCAACTTTATTATGGGTTCAC-------------------AGTG------------------------------------TTTTAACAGTTTTATTACTTTTTCGATTATAACAAATTCGGAAGTT---ATA--------T---------TC-----------------------TTACCCTGATAAAAG--------AAA----------CGTTGT----AAATTCAAAA---ATAACAAATTGCATTTAAATATTTTCAGTCAGTAAGGATTTTAATAGCTTCAGATATGTGAAAATTACATTTAAGCCTACGACTTTTTAAAACAAAAGTTATTTAACGAAATAATGCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................GTCCCAGAAGCAGATTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000420
.............GATCCTGGACGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2016.0063000210
.......GGA---GATCCTGGACGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000400
.......................GAGTCCCAGAAGCAGATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000310
...TTAAGGA---GATCCTGGACGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0031000200
...TTAAGGA---GATCCTGGACGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000300
......................CGAGTCCCAGAAGCAGATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000110
.........................GTCCCAGAAGCAGATTGATATGCCAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020001100
.GCTTAAGGA---GATCCTGGACGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000200
......AGGA---GATCCTGGACGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000110
.....AAGGA---GATCCTGGACGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000200
.......................GAGTCCCAGAAGCAGATTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000200
....................GACGAGTCCCAGAAGCAGATTGATATGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000200
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATATTTTCAGTCAGTAAGGA................................................................................2412.0020000110
....TAAGGA---GATCCTGGACGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000200
...TTAAGGA---GATCCTGGACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000110
.............GATCCTGGACGAGTCCCAGAAGCAGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0021000100
.........................GTCCCAGAAGCAGATTGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000200
...............................GAAGCAGATTGATATGCCAAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000110
......................CGAGTCCCAGAAGCAGATTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000200
....TAAGGA---GATCCTGGACGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000200
.................................AGCAGATTGATATGCCAAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000110
.GCTTAAGGA---GATCCTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTTCAGATATGTGAAA.......................................................2011.0010000100
......................CGAGTCCCAGAAGCAGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..................................................................................................................................................................................................................................................................................................TATAACAAATTCGGAAGTT---...............................................................................................................................................................................................................................1911.0010000100
.GCTTAAGGA---GATCCTGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..........................................................................................................................CG--ATGTTAAACACAAGGAGA---------------------------------CCTTGGC...............................................................................................................................................................................................................................................................................................................................................................2711.0010000010
.............GATCCTGGACGAGTCCCAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.......GGA---GATCCTGGACGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.........................GTCCCAGAAGCAGATTGATAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.............GATCCTGGACGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
....................GACGAGTCCCAGAAGCAGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.........A---GATCCTGGACGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
........................AGTCCCAGAAGCAGATTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................GTTGT----AAATTCAAAA---ATAACA................................................................................................................2111.0011000000
AGCTTAAGGA---GATCCTGGACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..CTTAAGGA---GATCCTGGACGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
................................................................................................................................................................................................................................................................................................................................................................................AAAAG--------AAA----------CGTTGT----AAATTCAAA..........................................................................................................................2311.0010000100
.....................................................................CTAATT---ATC-----------------------AATCAAAATCGG-----TCG--AT.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAATATTTTCAGTCAGTAAG..................................................................................2311.0010000100
....................GACGAGTCCCAGAAGCAGATTGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
.......GGA---GATCCTGGACGAGTCCCAGAAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
..............ATCCTGGACGAGTCCCAGAAGCAGATTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000100
..................................GCAGATTGATATGCCAAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................GATAAAAG--------AAA----------CGTTGT----AAATTCAA...........................................................................................................................2511.0010000010
........................AGTCCCAGAAGCAGATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.GCTTAAGGA---GATCCTGGACGAGTCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATATTTTCAGTCAGTAAG..................................................................................2211.0010000010
...TTAAGGA---GATCCTGGACGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
....TAAGGA---GATCCTGGACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.....AAGGA---GATCCTGGACGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
....................................................................................................................................AACACAAGGAGA---------------------------------CCTTGGCCA.............................................................................................................................................................................................................................................................................................................................................................2111.0011000000
............................CCAGAAGCAGATTGATATGCCAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..............ATCCTGGACGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.......GGA---GATCCTGGACGAGTCCCAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
........GA---GATCCTGGACGAGTCCCAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
......................................................................................................................................................................................GCCAACTTTATTATGGGTTCAC-------------------AGT.....................................................................................................................................................................................................................................................................................................................2511.0010000100
....................................AGATTGATATGCCAAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.GCTTAAGGA---GATCCTGGACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.................................AGCAGATTGATATGCCAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..................................................................................................................................TAAACACAAGGAGA---------------------------------CCTT..................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
.......................GAGTCCCAGAAGCAGATTGATATGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
....................GACGAGTCCCAGAAGCAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
AGCTTAAGGA---GATCCTGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.GCTTAAGGA---GATCCTGGACGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000100
AGCTTAAGGA---GATCCTGGACGAGTCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
.................................AGCAGATTGATATGCCAAAGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
..............ATCCTGGACGAGTCCCAGAAGCAGATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
.....................................GATTGATATGCCAAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
..............................AGAAGCAGATTGATATGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
......AGGA---GATCCTGGACGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000100
droYak3
AGCTCAAGGA---GATCCTGGAGGAGTCCCAGAAGCAAAGTGATATGCCCAAGGTTAGTTAACATTCCTCTAGT------CAAT-----------CAGTC-ATCAATCAAAATCGA-----TCG--ATATTAAAGACATAATGGAAAT-AGTTATAATTTGTATCGCAAAAGGGAGACCTTGACCGACTGTATT------------------------------------------------------------------------------ATTTATTACTTTTTCCATTATCACATAATCGGAAGTT---ATA--------T---------AG-----------------------TTACCCTGATAAAAG--------AAA----------CGTTGT----AAATTCAGAA---TTATCACATTGAATCTAAATAACT----------------------------------------------------------------------------------------TCGCTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20114.001408000060000
..CTCAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20112.0012000000120000
.GCTCAAGGA---GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2917.00700000070000
.........................GTCCCAGAAGCAAAGTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.00500000050000
....................................AAAGTGATATGCCCAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.00502000030000
....................GAGGAGTCCCAGAAGCAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.00400000040000
AGCTCAAGGA---GATCCTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.00401000030000
.............GATCCTGGAGGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.00400000040000
.............GATCCTGGAGGAGTCCCAGAAGCAAAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2914.00400000040000
.GCTCAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.00400000040000
..................................GCAAAGTGATATGCCCAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.00402000020000
.GCTCAAGGA---GATCCTGGAGGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3013.00300000030000
.......GGA---GATCCTGGAGGAGTCCCAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000030000
....CAAGGA---GATCCTGGAGGAGTCCCAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.00300000030000
..............ATCCTGGAGGAGTCCCAGAAGCAAAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.00300000030000
..CTCAAGGA---GATCCTGGAGGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.00300000030000
....CAAGGA---GATCCTGGAGGAGTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00201000010000
........................AGTCCCAGAAGCAAAGTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200000020000
......................GGAGTCCCAGAAGCAAAGTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200000020000
AGCTCAAGGA---GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3012.00200000020000
.......GGA---GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00201000010000
..............ATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000000000
.GCTCAAGGA---GATCCTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00202000000000
................CCTGGAGGAGTCCCAGAAGCAAAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200001010000
.GCTCAAGGA---GATCCTGGAGGAGTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00201000010000
....CAAGGA---GATCCTGGAGGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00210000010000
.............GATCCTGGAGGAGTCCCAGAAGCAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000020000
.....................AGGAGTCCCAGAAGCAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200000020000
.....AAGGA---GATCCTGGAGGAGTCCCAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000020000
AGCTCAAGGA---GATCCTGGAGGAGTCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000020000
....CAAGGA---GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200100010000
.............GATCCTGGAGGAGTCCCAGAAGCAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000020000
.....AAGGA---GATCCTGGAGGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000020000
.........A---GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000
.GCTCAAGGA---GATCCTGGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000
....CAAGGA---GATCCTGGAGGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000020000
..................................GCAAAGTGATATGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000000000
......................GGAGTCCCAGAAGCAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200000020000
.............GATCCTGGAGGAGTCCCAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200000020000
.GCTCAAGGA---GATCCTGGAGGAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
........................AGTCCCAGAAGCAAAGTGATATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
........GA---GATCCTGGAGGAGTCCCAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.GCTCAAGGA---GATCCTGGAGGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
........GA---GATCCTGGAGGAGTCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.............................CAGAAGCAAAGTGATATGCCCAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
AGCTCAAGGA---GATCCTGGAGGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
...............................GAAGCAAAGTGATATGCCCAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
....CAAGGA---GATCCTGGAGGAGTCCCAGAAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
.......................GAGTCCCAGAAGCAAAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..........................................................................................................................................................................AGGGAGACCTTGACCGACTGT........................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..CTCAAGGA---GATCCTGGAGGAGTCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.............................CAGAAGCAAAGTGATATGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.......GGA---GATCCTGGAGGAGTCCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
................................AAGCAAAGTGATATGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.............GATCCTGGAGGAGTCCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.GCTCAAGGA---GATCCTGGAGGAGTCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.........................GTCCCAGAAGCAAAGTGATATGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.......GGA---GATCCTGGAGGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...................................................................................................................................................................................................................................................................................................ATCACATAATCGGAAGTT---ATA--------T---------A.........................................................................................................................................................................................................2311.00101000000000
.........A---GATCCTGGAGGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....................................AAGTGATATGCCCAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
.............GATCCTGGAGGAGTCCCAGAAGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...TCAAGGA---GATCCTGGAGGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
........GA---GATCCTGGAGGAGTCCCAGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..................................................................................................................................................................................................................................................................................................................GTT---ATA--------T---------AG-----------------------TTACCCTGAT.......................................................................................................................................................................1911.00101000000000
........................................................................................................................................................................................CGACTGTATT------------------------------------------------------------------------------ATTTATTACTTTTTCCAT.....................................................................................................................................................................................................................................................2811.00101000000000
....................................AAAGTGATATGCCCAAGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................A---TTATCACATTGAATCTAAAT..................................................................................................2111.00101000000000
...................GGAGGAGTCCCAGAAGCAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
...............TCCTGGAGGAGTCCCAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..............................................................................................................................ATATTAAAGACATAATGGAAAT-AGT...............................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...TCAAGGA---GATCCTGGAGGAGTCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..................................................................................................................................................................................................................................................................................................TATCACATAATCGGAAGTT---AT.............................................................................................................................................................................................................................2111.00101000000000
.....AAGGA---GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..............ATCCTGGAGGAGTCCCAGAAGCAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
...................................CAAAGTGATATGCCCAAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...TCAAGGA---GATCCTGGAGGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
............................................................................................................................................................................GGAGACCTTGACCGACTGT........................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.................................AGCAAAGTGATATGCCCAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..............ATCCTGGAGGAGTCCCAGAAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.....AAGGA---GATCCTGGAGGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
AGCTCAAGGA---GATCCTGGAGGAGTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.......................GAGTCCCAGAAGCAAAGTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................................................................................................................................................................................................................TATCACATAATCGGAAGTT---...............................................................................................................................................................................................................................1911.00100000100000
.GCTCAAGGA---GATCCTGGAGGAGTCCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..............ATCCTGGAGGAGTCCCAGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
......................GGAGTCCCAGAAGCAAAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
........................................................................................................................................................................................................................................................................................................................ATA--------T---------AG-----------------------TTACCCTGATAAAAG--------A.........................................................................................................................................................2211.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................AAAAG--------AAA----------CGTTGT----AAATTCA............................................................................................................................2111.00101000000000
....................GAGGAGTCCCAGAAGCAAAGTGATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CACATTGAATCTAAATAACT----------------------------------------------------------------------------------------TCGCT.2511.00101000000000
..............ATCCTGGAGGAGTCCCAGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..CTCAAGGA---GATCCTGGAGGAGTCCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
....CAAGGA---GATCCTGGAGGAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEug1
AGCTAAAAGA---GATCCTGGAGGAGTCCCAAAAGCAGAATGATTTGCCCCAGGTACGTAGATATTTAAGTAATA---ATTCCT----------------AGTCAATCTAAGTCGAAGCATTAA--ATATTAATATCATTGAAGAAACTACTT-------------------------------------TAAATTTGTT----------------TTTCAAATTGGAGT---------------------------------CTTTAATT-----------------------------------------------TAAATT-----ATA-AA-----------------------TTATTATTAATTAAT--------AAT----------TATTAT----AATTTTAAAA---CTA------------------------------------------------------------------------------------------------------------TTATCTTSizeHit CountTotal NormTotal
No Reads
droBia1
AGCTGAAGGA---GATCCTGGAGGAGTCCCAGAAGCAGAGTGATCAGCCCCAGGTGAGTAAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AGCTCAAGGA---GATCCTGGAGGAGTCCCAGAAGCAGACTGATGCGCCCAAGGTTCGTAGCCACTTGAGTAAAT---ATTCCA----------------AGCTGATTATAATTGAAGTACTAAGC-------------------------------------------------------------------------------------------------------------------TGAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGCTCAAGGA---GATCCTGGAGGAGTCCCAGAAGCAGAGTGATGCACCAAAGGTGAGAAAATAATAGAGAGGCAATTAAGATTGCACAGGCAACAAG----------------------------ATATT-----------GAAATCT-----------------------------------------TTTAAGGGGTTAGTTGTATATTTTAATTTTAAATTAAAGCTTTTCTTCCAATACAACATGCAAATAAAATTAGGTTAAACAAATTTATAGGTTAATC---------------AAAT------------TAAGTT-----ATTTAATTATCGAAAAAAAGTCAGCATTGGTAAGCTTATAAAAA--------TAA----------CGTATT----A-------------TTTCACACCAAATTTAAATATTT---------------------------------------------------------------------------------------GTATTATSizeHit CountTotal NormTotal
No Reads
droRho1
AGCTCAAGGA---GATCATGGAGGAGTCCCAGAAGCAGATTGATATGCCAAAGGTTCGTAAATACTACATAGCC-ATAAAGAATGCACAGTCAAGAAG----------------GCTGCAAAGT--ATATTAATAT--------------------------------------------------------------G----TTTTGTAATTCAATTTCAAATTGAAGC----------------------------------------AGAT---------CTTCTAATATAAAACAGCCTGAATTTGACATTCAGATATGAAGAGGAAA-AC-----------------------TCACTATGATAAAATTTATTTAAAAACAGGCAAAACTCCTGT----T------TAA---ATT------------------------------------------------------------------------------------------------------------TTACAATSizeHit CountTotal NormTotal
No Reads
droFic1
AGCTAAAGGA---AATCTTTGAGGAGTCCCAGAGGCAGAGTGATTTGCCGAAGGTTTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGTTCAAGGA---GATTATGGAGGAGACCCAGAGGCAGAATGACCAACCCAAGGTATGTATT----TAAGAGTTC---ATTTAA----------------AGGTTCATATGATCAGGGAACTGAAAATAATA--AA--------------------------------------------------------------A----TATTCAATTTGAATGTCCGTTAGG------------------------------------C----CCAGCTTTCTTAACCTTGCCAGAGTCATGAAA--------------------------------------------ATAATTCAGCTT--TCTTTATCTTTATATTTATTTATACT----------CCTTATCAGTA------A---GTGTC-----------------------------------------------------------------------------------------------------------ATGTCATTSizeHit CountTotal NormTotal
No Reads
droAna3
AGCTCAAGGA---GATCCTGGAGGAGTCCCAAAGGCAAAATGATCAGGAAAAGGTAAG----CATTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.GCTCAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21144.00447001360
.........................GTCCCAAAGGCAAAATGATCAGGAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28117.00170000170
.................................GGCAAAATGATCAGGAAAAGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23115.00150000132
....CAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18112.0012901011
.........................GTCCCAAAGGCAAAATGATCAGGAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27111.0011300080
..CTCAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20111.00110000110
..................................GCAAAATGATCAGGAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19111.00110000101
.............GATCCTGGAGGAGTCCCAAAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2318.008300041
....CAAGGA---GATCCTGGAGGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2017.007100060
...TCAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.006200040
.........................GTCCCAAAGGCAAAATGATCAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.006600000
.................................GGCAAAATGATCAGGAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.005001040
.........................GTCCCAAAGGCAAAATGATCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.004400000
....................................AAAATGATCAGGAAAAGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.004010030
..................................GCAAAATGATCAGGAAAAGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003000021
.GCTCAAGGA---GATCCTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
.............GATCCTGGAGGAGTCCCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003200010
.............GATCCTGGAGGAGTCCCAAAGGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003300000
.................................GGCAAAATGATCAGGAAAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000020
.........................GTCCCAAAGGCAAAATGATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
.................................GGCAAAATGATCAGGAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000020
.........................GTCCCAAAGGCAAAATGATCAGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002100010
.......GGA---GATCCTGGAGGAGTCCCAAAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000020
.GCTCAAGGA---GATCCTGGAGGAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000020
..................................GCAAAATGATCAGGAAAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002100010
..............................AAAGGCAAAATGATCAGGAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000020
.GCTCAAGGA---GATCCTGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000011
....................................AAAATGATCAGGAAAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000020
....CAAGGA---GATCCTGGAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
......................GGAGTCCCAAAGGCAAAATGATCAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.............................CAAAGGCAAAATGATCAGGAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
...TCAAGGA---GATCCTGGAGGAGTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...........................CCCAAAGGCAAAATGATCAGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................TCCCAAAGGCAAAATGATCAGGAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
....CAAGGA---GATCCTGGAGGAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
AGCTCAAGGA---GATCCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.GCTCAAGGA---GATCCTGGAGGAGTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
.......GGA---GATCCTGGAGGAGTCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
............................CCAAAGGCAAAATGATCAGGAAAAGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
.GCTCAAGGA---GATCCTGGAGGAGTCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.......................GAGTCCCAAAGGCAAAATGATCAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.GCTCAAGGA---GATCCTGGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..............................AAAGGCAAAATGATCAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
..........................TCCCAAAGGCAAAATGATCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........GA---GATCCTGGAGGAGTCCCAAAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
..CTCAAGGA---GATCCTGGAGGAGTCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
...................................CAAAATGATCAGGAAAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..................................GCAAAATGATCAGGAAAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
................CCTGGAGGAGTCCCAAAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
.............................CAAAGGCAAAATGATCAGGAAAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..........................TCCCAAAGGCAAAATGATCAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.GCTCAAGGA---GATCCTGGAGGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.GCTCAAGGA---GATCCTGGAGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
......................GGAGTCCCAAAGGCAAAATGATCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
AGCTCAAGGA---GATCCTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
................CCTGGAGGAGTCCCAAAGGCAAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
..............ATCCTGGAGGAGTCCCAAAGGCAAAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
............................CCAAAGGCAAAATGATCAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
......................GGAGTCCCAAAGGCAAAATGATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.GCTCAAGGA---GATCCTGGAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.............GATCCTGGAGGAGTCCCAAAGGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...............TCCTGGAGGAGTCCCAAAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................CCCAAAGGCAAAATGATCAGGAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..................TGGAGGAGTCCCAAAGGCAAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................GAGTCCCAAAGGCAAAATGATCAGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.GCTCAAGGA---GATCCTGGAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
....................................AAAATGATCAGGAAAAGGTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.........................GTCCCAAAGGCAAAATGATCAGGAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
....CAAGGA---GATCCTGGAGGAGTCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.............................CAAAGGCAAAATGATCAGGAAAAGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
..............................AAAGGCAAAATGATCAGGAAAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
...TCAAGGA---GATCCTGGAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.............................CAAAGGCAAAATGATCAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.............GATCCTGGAGGAGTCCCAAAGGCAAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.........................GTCCCAAAGGCAAAATGATCAGGAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.......GGA---GATCCTGGAGGAGTCCCAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..........................TCCCAAAGGCAAAATGATCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................AGGAGTCCCAAAGGCAAAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.................CTGGAGGAGTCCCAAAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
droBip1
AGCTGAAGGA---GATTATCGAGGAGTCCAAAAGGCAAAACGATCAGGAAAAGGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
AGATGCGGCAACTGATGCTCGAGGGAA-CGAGAAGCGAACTAGCACTCCAGCAGAACATTA---------------------------------------------------------TGCTCGGA-------------------------------------------------------------------------------------------------------------------TTCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................A-CGAGAAGCGAACTAGCACTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000000
droPer2
AGATGCGGCAACTGATGCTCGAGGGAA-CGAGAAGCGAACTAGCACTCCAGCAGAACATTA---------------------------------------------------------TGCTCGGA-------------------------------------------------------------------------------------------------------------------TTCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........CTGATGCTCGAGGGAA-CGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000002
AGATGCGGCAACTGATGCTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000002
droWil2
AATTAAAAGA---AATCCTTGAGGAAACGGAAAAAAACAATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........GA---AATCCTTGAGGAAACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2016.00600600
...TAAAAGA---AATCCTTGAGGAAACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200200
.................CTTGAGGAAACGGAAAAAAACAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200
.ATTAAAAGA---AATCCTTGAGGAAACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.................CTTGAGGAAACGGAAAAAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.......AGA---AATCCTTGAGGAAACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..............ATCCTTGAGGAAACGGAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
................CCTTGAGGAAACGGAAAAAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
........GA---AATCCTTGAGGAAACGGAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.............AATCCTTGAGGAAACGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
......AAGA---AATCCTTGAGGAAACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..................TTGAGGAAACGGAAAAAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..................TTGAGGAAACGGAAAAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.....AAAGA---AATCCTTGAGGAAACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
......AAGA---AATCCTTGAGGAAACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
droVir3
AGCTCAAGGA---AATTCTCGAGGAGACAAACAAGAATGCGGATGAGCCCAAGGTCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.GCTCAAGGA---AATTCTCGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2124.509001000000000001011200120000000000000000000000000000000000000000
..........................ACAAACAAGAATGCGGATGAGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002001000000000000001000000000000000000000000000000000000000000000
............................AAACAAGAATGCGGATGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000001000000000000000000000000000000000000000000010
..CTCAAGGA---AATTCTCGAGGAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000001000000000000000000000000000000000000000000000010
..CTCAAGGA---AATTCTCGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2032.006003000000000000000000010000000000000000000000000000000000000020
....................................ATGCGGATGAGCCCAAGGTCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2212.002001000000000000000000010000000000000000000000000000000000000000
....CAAGGA---AATTCTCGAGGAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000100000000000000000000000000000000000000000000010
...................................AATGCGGATGAGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1831.334002000000000000001000100000000000000000000000000000000000000000
....CAAGGA---AATTCTCGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1831.334001000000000000100000110000000000000000000000000000000000000000
................................AAGAATGCGGATGAGCCCAAGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2431.334001000000000000000010010000000000000000000000000000000000000010
.....AAGGA---AATTCTCGAGGAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
.......................................CGGATGAGCCCAAGGTCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1911.001001000000000000000000000000000000000000000000000000000000000000
............................AAACAAGAATGCGGATGAGCCCAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
............................AAACAAGAATGCGGATGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
........................AGACAAACAAGAATGCGGATGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
...................................AATGCGGATGAGCCCAAGGTCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2311.001000000000000000000000000000000000000000000000000000000000000010
......AGGA---AATTCTCGAGGAGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
......AGGA---AATTCTCGAGGAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
...........................CAAACAAGAATGCGGATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
AGCTCAAGGA---AATTCTCGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2221.002001000000000000000000000000000000000000000000000000000000000010
..................................GAATGCGGATGAGCCCAAGGTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
......................GGAGACAAACAAGAATGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...........................CAAACAAGAATGCGGATGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......................GGAGACAAACAAGAATGCGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.GCTCAAGGA---AATTCTCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.002000000000000001000000000000000010000000000000000000000000000000
....................................ATGCGGATGAGCCCAAGGTCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2211.001000000000000000000000000000000000000000000000000000000000000010
.........................GACAAACAAGAATGCGGATGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
...........................CAAACAAGAATGCGGATGAGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
.............................AACAAGAATGCGGATGAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
.........................GACAAACAAGAATGCGGATGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
........................AGACAAACAAGAATGCGGATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
.........................GACAAACAAGAATGCGGATGAGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.................CTCGAGGAGACAAACAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.GCTCAAGGA---AATTCTCGAGGAGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000100000000000000000000000000000000000000000
.........................GACAAACAAGAATGCGGATGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
..............................ACAAGAATGCGGATGAGCCCAAGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
............................AAACAAGAATGCGGATGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.................CTCGAGGAGACAAACAAGAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.........................GACAAACAAGAATGCGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
..............................ACAAGAATGCGGATGAGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
............................AAACAAGAATGCGGATGAGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000010000000000000000000000000000000000000000000000000000000
.GCTCAAGGA---AATTCTCGAGGAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
.....................................TGCGGATGAGCCCAAGGTCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111.001001000000000000000000000000000000000000000000000000000000000000
......AGGA---AATTCTCGAGGAGACAAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................ATGCGGATGAGCCCAAGGTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................AACAAGAATGCGGATGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
..CTCAAGGA---AATTCTCGAGGAGACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................AAACAAGAATGCGGATGAGCCCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
........GA---AATTCTCGAGGAGACAAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................GACAAACAAGAATGCGGATGAGCCCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
........................AGACAAACAAGAATGCGGATGAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000010000000000000000000000000000000000000000000000
.......GGA---AATTCTCGAGGAGACAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
..............................ACAAGAATGCGGATGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.GCTCAAGGA---AATTCTCGAGGAGACAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..................................GAATGCGGATGAGCCCAAGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.672101000000000000000000000000000000000000000000000000000000000000
......AGGA---AATTCTCGAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.672002000000000000000000000000000000000000000000000000000000000000
..CTCAAGGA---AATTCTCGAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.672002000000000000000000000000000000000000000000000000000000000000
...TCAAGGA---AATTCTCGAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.672002000000000000000000000000000000000000000000000000000000000000
................................AAGAATGCGGATGAGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.672002000000000000000000000000000000000000000000000000000000000000
....................................ATGCGGATGAGCCCAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.672001000000000000000000000000000000000000000000000000000000000010
....CAAGGA---AATTCTCGAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.672000000000000001000000000000000000000000000000000000000000000010
...............................CAAGAATGCGGATGAGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501001000000000000000000000000000000000000000000000000000000000000
...............................CAAGAATGCGGATGAGCCCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501001000000000000000000000000000000000000000000000000000000000000
...................................AATGCGGATGAGCCCAAGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.331000000000000000000000000000000000000000000000000000000000000010
...................................AATGCGGATGAGCCCAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331001000000000000000000000000000000000000000000000000000000000000
..................................GAATGCGGATGAGCCCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331001000000000000000000000000000000000000000000000000000000000000
.....AAGGA---AATTCTCGAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331001000000000000000000000000000000000000000000000000000000000000
...TCAAGGA---AATTCTCGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331000000000000000000000000000000000100000000000000000000000000000
.................................AGAATGCGGATGAGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331001000000000000000000000000000000000000000000000000000000000000
...................................AATGCGGATGAGCCCAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331000000000000000000000000000000000000000000000000000000000000010
..................................GAATGCGGATGAGCCCAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.331001000000000000000000000000000000000000000000000000000000000000
droMoj3
AGCTCAACGA---AATTCTGGAGGAGACCAACAAGAGCACGGATGAGCCCAAGGTCAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................GACCAACAAGAGCACGGATGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23122.00228000014
.........................GACCAACAAGAGCACGGATGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.0010300007
.........................GACCAACAAGAGCACGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.006400002
.........................GACCAACAAGAGCACGGATGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004400000
............................CAACAAGAGCACGGATGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003100002
......................GGAGACCAACAAGAGCACGGATGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003000003
............................CAACAAGAGCACGGATGAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003300000
.........................GACCAACAAGAGCACGGATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002100001
..........................ACCAACAAGAGCACGGATGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
...........................CCAACAAGAGCACGGATGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000002
............................CAACAAGAGCACGGATGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
..........................ACCAACAAGAGCACGGATGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002100001
.......................GAGACCAACAAGAGCACGGATGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002100001
....................................GCACGGATGAGCCCAAGGTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.............AATTCTGGAGGAGACCAACAAGAGCACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
........GA---AATTCTGGAGGAGACCAACAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.........A---AATTCTGGAGGAGACCAACAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
......................GGAGACCAACAAGAGCACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
....CAACGA---AATTCTGGAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.............................AACAAGAGCACGGATGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.....AACGA---AATTCTGGAGGAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............................CAACAAGAGCACGGATGAGCCCAAGGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
..............................ACAAGAGCACGGATGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
....CAACGA---AATTCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.......................GAGACCAACAAGAGCACGGATGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
......ACGA---AATTCTGGAGGAGACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............................CAACAAGAGCACGGATGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................CAAGAGCACGGATGAGCCCAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.....AACGA---AATTCTGGAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...............................CAAGAGCACGGATGAGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............ATTCTGGAGGAGACCAACAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..............ATTCTGGAGGAGACCAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................AGACCAACAAGAGCACGGATGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
....CAACGA---AATTCTGGAGGAGACCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..................................GAGCACGGATGAGCCCAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............ATTCTGGAGGAGACCAACAAGAGCACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
AGCTCAACGA---AATTCTGGAGGAGACCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..............ATTCTGGAGGAGACCAACAAGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.............................AACAAGAGCACGGATGAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................CAACAAGAGCACGGATGAGCCCAAGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
..................TGGAGGAGACCAACAAGAGCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........................GACCAACAAGAGCACGGATGAGCCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
.......CGA---AATTCTGGAGGAGACCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
....CAACGA---AATTCTGGAGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............AATTCTGGAGGAGACCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..CTCAACGA---AATTCTGGAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..............................ACAAGAGCACGGATGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..............ATTCTGGAGGAGACCAACAAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.....AACGA---AATTCTGGAGGAGACCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droGri2
AGCTCAATGA---AATGATGGAGGCGAGCAACAAGGGAGTCGATGAGCCCAAGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........A---AATGATGGAGGCGAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50110
.....AATGA---AATGATGGAGGCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50101
....CAATGA---AATGATGGAGGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50101

Generated: 05/18/2015 at 06:20 PM