ID:

dsi_17520

 Coordinate:

x:87164-87313 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.7 -22.6 -22.6

Flybase annnotation

five_prime_UTR [x_87314_87336_+]; CDS [x_87337_87367_+]; exon [x_87314_87367_+]; three_prime_UTR [x_87314_87367_+]; exon [x_87314_87367_+]; intron [x_87002_87313_+]; intron [x_87002_87313_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTTGTATATACTTTGAAAATAAAGTTAAAAACTTGACATGACGTGCCCATTGTAGGGTTAATGTTTCTGCTACTGCTAATCAGTGTTCCCACTCCAGAGTTCGTTACTGAATTATCGATAACAAGAAGCAAAAAGGTTACATGCTAATTTATTTATGTATTAAATTTTACAATTTAATCGTGTATCTTCAGTGGCTGAGTTGGAAACGGTGTAGTTAACGTAATGGAATCGATTACCTTTGGAGTTTTG
**************************************************...............(((.(((((((....((((((.....(((....)))....))))))....((........))......(((((.(((((...............((((((((....))))))))))))))))))))))))).)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M053
female body
 M023
head
..........ACTTTGAAAAGAGAGTTAAAGA.......................................................................................................................................................................................................................... 22 3 1 3.00 3 1 0 1 1 0 0 0
..........ACTTTGAAAAGAGAGTGAAAAA.......................................................................................................................................................................................................................... 22 3 7 1.14 8 0 0 4 3 0 1 0
.........................................................................................................................................................................................................TGGAAACGGTGTAGTTAACGTAATGGAATC................... 30 0 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................................................................................TACAATTTAATCGTGTATCTTCAGTGGCT..................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................GCTGAGTTGGAAACGGTG...................................... 18 0 1 1.00 1 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................AATGGAATCGATTACCTTTGGAGTTT.. 26 0 1 1.00 1 1 0 0 0 0 0 0
..................................TGACATGACGTGCCCATTGTAGGGT............................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................................................................................................TCTTCAGTGGCTGAGTTGGAAACGGTG...................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
..........ACTTTGAAGAGAGAGTTAAAA........................................................................................................................................................................................................................... 21 3 5 0.60 3 3 0 0 0 0 0 0
..........ACTTTGAAGAGAGAGTTAAA............................................................................................................................................................................................................................ 20 3 16 0.44 7 7 0 0 0 0 0 0
...........CTTTGAAGAGAGAGTTAAAA........................................................................................................................................................................................................................... 20 3 16 0.38 6 6 0 0 0 0 0 0
...........CTTTGAAAAGAGAGTTAAAGA.......................................................................................................................................................................................................................... 21 3 14 0.14 2 1 0 1 0 0 0 0
............TTTGAAGATAGAGTTAAAA........................................................................................................................................................................................................................... 19 2 7 0.14 1 1 0 0 0 0 0 0
..........ACTTTGAAAAGAGAGTGAAAA........................................................................................................................................................................................................................... 21 3 18 0.11 2 0 0 0 0 1 1 0
.........GACTTTGAAAAGAGAGTTAAA............................................................................................................................................................................................................................ 21 3 11 0.09 1 0 0 0 1 0 0 0
............TTTGAAAATAGAGTGAAAAA.......................................................................................................................................................................................................................... 20 2 11 0.09 1 0 0 0 0 0 0 1
...........................................................................................................................................................................................................GAAACGGTGTAGTTT................................ 15 1 11 0.09 1 1 0 0 0 0 0 0
...........CTTTGGAAAGAGAGTTAAAAA.......................................................................................................................................................................................................................... 21 3 12 0.08 1 0 0 0 1 0 0 0
......................................ATGGCGTGCCCTTTGTA................................................................................................................................................................................................... 17 2 14 0.07 1 1 0 0 0 0 0 0
.........AACTTTGAAAAGAGAGTTAAA............................................................................................................................................................................................................................ 21 3 17 0.06 1 1 0 0 0 0 0 0
...............................................................................................................................AGCAAGAAGGTTCCATG.......................................................................................................... 17 2 20 0.05 1 0 0 0 0 1 0 0
..................................................................................................................................................................................................................TGTATTTGACGTAGTGGAA..................... 19 3 20 0.05 1 1 0 0 0 0 0 0
...............GAAAAGAAAGTTAAAAA.......................................................................................................................................................................................................................... 17 1 20 0.05 1 0 1 0 0 0 0 0

Anti-sense strand reads

AAAACATATATGAAACTTTTATTTCAATTTTTGAACTGTACTGCACGGGTAACATCCCAATTACAAAGACGATGACGATTAGTCACAAGGGTGAGGTCTCAAGCAATGACTTAATAGCTATTGTTCTTCGTTTTTCCAATGTACGATTAAATAAATACATAATTTAAAATGTTAAATTAGCACATAGAAGTCACCGACTCAACCTTTGCCACATCAATTGCATTACCTTAGCTAATGGAAACCTCAAAAC
**************************************************...............(((.(((((((....((((((.....(((....)))....))))))....((........))......(((((.(((((...............((((((((....))))))))))))))))))))))))).)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
........................................................................................................................................................................ATGTTAAATTGGCTCAGAGA.............................................................. 20 3 12 0.08 1 1
........................................................................................................................................................................ATGTTAAAGTGGCTCATAGA.............................................................. 20 3 16 0.06 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:87114-87363 + dsi_17520 TTTTGTATAT--------------------ACTTTGAAAAT--------------------------------------------------------------------A------------------AAGTTAAAAAC-------T---------------------------------------------TGACATGACGTGCCCATTGTAGGGTTAATGTTTCTGCTACTGCTAATCAGTGTTCCCACTCCAGAGTTC----GTT----------------------------------------------------ACTGAATTATC-------GATAAC-------AAGAAGC-----AA-AAAGGTTACATGCTAATTTATTT-ATGTATTAAATTTTACAATTTAATCGTGTATCT-----------------------------------------TCAGTGGCTG----------------------AGTTGGAAACGGTGTAGTTAACGTAATGGAATCGATTACCTTTGGAGTTTTG
droSec2 scaffold_10:21258-21505 + TTTTGTATAT--------------------ACTTTGAAAAT--------------------------------------------------------------------A------------------AAGCTAAAAGC-------T---------------------------------------------TGACATGACGTGCCCATTGTAGGGTTAATGTTTCTGCTACTG-TAATCAGTGTTCCCACTCCAGAGTT-----GTT----------------------------------------------------ACTGAATTATC-------GATAAC-------AAGAAGC-----AA-AAAGGTTACATGATAATTTATTT-ATGTATTAAATTTTGCAATTTAATCGAGTATCT-----------------------------------------TCAGTGGCTG----------------------AGTTGGAAACGGTGTAGTTAACGTAATGGAATCGATTACCTTTGGAGTTTTG
dm3 chrX:149572-149853 + TTTCGTATAT--------------------ACTTTGAAAAT--------------------------------------------------------------------A------------------AAGCTAAAAAGTAGTGGCTTATTA-ATTTATATTTAT----------------TTATTT---CTCGACATGACATGCCCATTGTGGGGTTAATATTTCTGTTTCTG-TAATCAGTGTTCCCACTCCAGAGTTC----TTT----------------------------------------------------ACTGAATTATC-------GATAAC-------TAGAAGC-----AA-AATGGTTGCATGCATATTAATTT-ATGTATTGTAGTTTACAATTTAATTGAGTATCG-----------------------------------------TCAGTGGTTGC---------------------AGCTGGAAACGGTGTAGTTAACGTAATGGAATCGATTACCTTTGGAGTTTTG
droEre2 scaffold_4644:90759-91057 + TTTTATGTAT--------------------ACTTTGAAAAT--------------------------------------------------------------------AGGGTGCAACTAGATTTTAAAGATAAAAACTAGTGTTTTATTG-TTTTATATGTAC----------------ATATTTATTATTGACATGACATGCCCATTGTTGGGTTAATGCTTCTGCTCCCG-TATTCAGTGTTCACCCTCCAGAGTTT----ATT----------------------------------------------------ACTGAATTATC-------GATAAC-------AAAAAGC-----AA-AAAGGTTGCATGCTAATT----T-ATGTATTGTAGTTTACAATTTAATTGAGTATCG-----------------------------------------TCAGTGGGAGC---------------------AGTTAGAAGCGGTGTAGTTAACGTAATGGAATCGATTACCTTTGGAGTTTTG
droYak3 X:89709-89981 + TTTTATCTAC--------------------ACTTTGGAAAT--------------------------------------------------------------------AAGGTGCAATTAGATTTT-------AAAGC-------T----G-TCTTATATGTAT----------------TTATTT---ATTGACATGACATGCCCATTGTAGGGTTAATGCTTCTGCTCCCG-TAATCAGTGTTTACACTCCAGAGTTC----AGT----------------------------------------------------A-TAAATTATC-------GATAAA-------A-----C-----GAAACCGGTTGCACGCTAATT----T-TTGTATTGTATTTTATAATTTAATTGAGTATCG-----------------------------------------TCAGTGGGAGC---------------------AGTTAGAAGCGTCATAGTTTACGTAATGGAATCGGTTACCTTTGGAGTTTTG
droEug1 scf7180000409277:456100-456366 + ACTTTTAGAG--------------CCAATTATTTTA--------------------------------------------------------------------------------------------------AAAAC-------G----ATACATATATTTAT----------------TTATTT--TATAAACATTTTTTGCCCTTGATAGGGTTAAAGCTCCAGCCATCG-AAATCAGTGTTTACACACCACAATTC----AGT----------------------------------------------------AATCGCTTATC-------GATAAC--CAC-CC-AAAGC-----AA-AAAGTTGGCGTGCTAATT----T-ATGTATTGTATTCAACAATTTAATTGTCAGTT----------------------------------------TGTCAGTGGGATC---------------------AGTTGAAACCGGTGCAAATGACGTAATGGAGTCGATTACTTTTGGAGTACTA
droBia1 scf7180000301760:1091871-1092176 + TACATAGT---------------------------------------------------------------------------------GTGTATTATACCTTAAATTGG------------------AAGTGAGAAAC-------TTA--ATATTTATATTTATTTTTCATATTATATGTGCAATT---AT-----TGACATGCCCATCGTAGGGTTAAAGCTTCAGCCGGCG-AAACCAGTGTTCACACACTAAGTTCATTTCC----G-A---TGT------------------------------------------ATCGCCTATCGATTACCGATAAA-CCAC-CTGCATGC-----GG-AAAGCTTGCGTGCTAATT----T-ATGTATTGAATTTAACAATTTAATTGAGAATCG-----------------------------------------TCAGTGGGAGC---------------------TGTTCTAACCGCTGTGGCTGACGTAATGGAGTCGATTACCTTTGGAGTTCTG
droTak1 scf7180000415179:79174-79387 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACATGCCCGCTGAAGGGTTAAAGCTTCTG--------AGCCAGTGTTCACACACCAGAATCT----TTTTCC-A---AGT-----------------------------------------TATCGCTTATCGATAGCCG------CCAC-CTGCAAGC-----GG-AAAGTTTGCGTGCTAATT----TGATGTATTGTATTTAACAATTTAATTGGGATTCG-----------------------------------------TGAGTGGGAGC---------------------AACCAGAACCGCTGCACATGACGTAATGGAGTCGATTACCTTTGGAGTTCTG
droEle1 scf7180000491011:1130991-1131205 + T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACATGCCCGTTTAAGGGTTAAAGCTTCAGCCGGCA-AAATCAGTGTTCACACACCAGATTTC----CAT----------------------------------------------------ACTAAGTTATC-------GATAATTCCAT-CAG-CGGC-----GG-AAAGTTTGCGTGCTAATT----T-ATGTATTGTATTTAACAATTTAATTGCAGATCG-----------------------------------------TCACTCAAAGC------------------AGAAGTTCAAACCGCTGCAGATGACGTAATGGAGTCGATTACCATTGGAGTTCTG
droRho1 scf7180000779506:915187-915452 + AACTATGT---------TCCAA--------GCTTTAAACAA--------------------------------------------------------------------A-----------------------------------------ATATTTAAATTCATACATCAC---------ACATTT---AT-----TGACATGCCCATTGTAGGGTTAAAGCTTTAACCGGCG-AAATCAGTGTGCACACACCAAATTTC----CTC----------------------------------------------------ACTGAGTTATC-------GATATAAGTAT-CAG-CGGC-----GG-AAAGTTTGCGTGCTAATT----T-ATGTATTGTATTTAATAATTTAATTGAGGATCG-----------------------------------------TCACTTGGAGC---------------------AGTTGAAACCGCTGCACATGACGTAATGGAGTCGATTATCTTTGGAGTTCTG
droFic1 scf7180000453927:565664-565926 + TTT-ATATTAACCTTGTTCCGGACCCA---------ATAATGTAGTTGTATATTAAAA------------------------------------------------------------------------------------------------------------------------------------AT-----TAGCAGGCCCAATGAAGGGTTAAAGCTTTA-CCGGCG-AATTCAGTGTGTACACACTAGATTTC----GAT----------------------------------------------------ATTGAGTTATC-------GATAAATATAA-AAGCAAGC-----GGAAAAGTTTGCGTGCTAATT----T-ATGTGTTGAATTTAATAATTTAATTGGGATTCT-----------------------------------------TCGCTCAGAGC---------------------AGTTGAAACCGCTGCGAATGACGTAATGGAGTCGATTATTTTTGGAGTTCTT
droKik1 scf7180000302383:1164920-1165021 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGTTTGCGTGCTAATT----C-A----TTTTATTTAATTATTTCATTTACGCTCG-----------------------------------------CCACT------------------------------TGACAGTAATGCCCATTACGTAATGGAGGCTATTACCTTTGGAGTTCTG
droAna3 scaffold_12929:1680772-1680858 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTAAACAATTTAATTGCCGATCG-----------------------------------------TCGAGTGGAGA---------------------GCTT-GAA---GAGCCAATGACGCAATGGACGTGGTTTACTTTGGAGTTCTA
droBip1 scf7180000396543:145036-145128 - TATTTAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTTAATTTGATTGTTGATCG-----------------------------------------TTTAGTGAAAA---------------------AGCTTGAAT---AGCAAATGACGCAATGGAAGCCGTTCAATTTGGAGTACTA
dp5 XL_group1a:459632-459908 - CTGTGCATAT---T-----------------------------AGTATTC----------------------TGCGACTTTAAGGAAACATTCATTATATCTTAAATTA-------------------------AAC---------------------------------------------------------------------------------------------GGCA-GCGGCAGTGTGTGCACACCTACCAGA-TTGG----TCGCAATGT-CGAAATGTCCTAAAAAATG-CTAAAAGCC--------AACA-CG----------------------TTC-CAG-CGGTCGAAAGTAT-------CGTGCCAA--------------------------------------ACGCTCTTCTCAA-AATTTAATTGCAAA------------CGTGCCGTCGACATTAGATATAAGCTATAACTCGGAATCGCAAAGTAATGCCAATGACATAATGGATCCAATTACTTTCGGTGTTTTA
droPer2 scaffold_26:187144-187420 + CTGTGCATAT---T-----------------------------AGTATTC----------------------TGCGACTTTAAGGAAACATTCATTATATATTAAATTA-------------------------AAC---------------------------------------------------------------------------------------------GGCA-GCGGCAGTGTGTGCACACCTACCGGA-TTGG----TCGCAATGT-CGAAATGTCCTAAAAAATG-CTAAAAGCC--------AACA-CG----------------------TTC-CAG-CAGTCGAAAGTAT-------CGTGCCAA--------------------------------------ACGCTTTTCTCAA-AATTTAATTGCAAA------------CGTGCCGTCGACATTAGACATAAGCTATAACTCGGAATCGCAAAGTAATGCCAATGACATAATGGATCCAATTACTTTCGGTGTTTTA
droWil2 scf2_1100000004909:9934138-9934171 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACGTAATGGAGTCCATAACATTTGGTGTATTG
droVir3 scaffold_12928:6288937-6289206 - ATTTAA-TAT---T-----------------------------AATATTACGTTAAAAATCCGAGTGAAACTTGCAATTTT--------------------------GA-------------------------AAT-------------------------------------------------------------GGCA-------------------------------A-AAACAAGTGTGTACACACTCAAGCAATTTGG----T-G---TGTACAAAATGTGCTAAAA-ATGCCCAAAAGCCTTACCCTCAAAA-TG----------------------GTCAAAG-CAATCGAAAACAT--------------TTTTTTTT-GAGTGCTAA---------------------ACGTTTTATTAAACAATTTAATTGAAAGTAACAAACGCTGCGTGCCACTCAGATT--------------------------------ATATAAATGTTGCCATGGAGTCGATTACGTTCGGAGTATTG
droMoj3 scaffold_6359:4497761-4497787 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAGTCCATTACTTTTGGAGTTCTA
droGri2 scaffold_14853:5105082-5105121 - T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATGTCGCCATGAATCCGATAACGTTTGGCGTTTTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTTGTATAT--------------------ACTTTGAAAAT--------------------------------------------------------------------A------------------AAGTTAAAAAC-------T---------------------------------------------TGACATGACGTGCCCATTGTAGGGTTAATGTTTCTGCTACTGCTAATCAGTGTTCCCACTCCAGAGTTC----GTT----------------------------------------------------ACTGAATTATC-------GATAAC-------AAGAAGC-----AA-AAAGGTTACATGCTAATTTATTT-ATGTATTAAATTTTACAATTTAATCGTGTATCT-----------------------------------------TCAGTGGCTG----------------------AGTTGGAAACGGTGTAGTTAACGTAATGGAATCGATTACCTTTGGAGTTTTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAACGGTGTAGTTAACGTAATGGAATC...................3011.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TACAATTTAATCGTGTATCT-----------------------------------------TCAGTGGCT...........................................................................2911.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTG----------------------AGTTGGAAACGGTG......................................1811.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAATCGATTACCTTTGGAGTTT..2611.00100000001000000000
................................................................................................................................................................................................TGACATGACGTGCCCATTGTAGGGT...........................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------------------------------------TCAGTGGCTG----------------------AGTTGGAAACGGTG......................................2711.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGGTGTAGTTT................................15110.09100000001000000000
droSec2
TTTTGTATAT--------------------ACTTTGAAAAT--------------------------------------------------------------------A------------------AAGCTAAAAGC-------T---------------------------------------------TGACATGACGTGCCCATTGTAGGGTTAATGTTTCTGCTACTG-TAATCAGTGTTCCCACTCCAGAGTT-----GTT----------------------------------------------------ACTGAATTATC-------GATAAC-------AAGAAGC-----AA-AAAGGTTACATGATAATTTATTT-ATGTATTAAATTTTGCAATTTAATCGAGTATCT-----------------------------------------TCAGTGGCTG----------------------AGTTGGAAACGGTGTAGTTAACGTAATGGAATCGATTACCTTTGGAGTTTTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................AAC-------AAGAAGC-----AA-AAAGGT................................................................................................................................................................................1812.0020002
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTG----------------------AGTTGGAAACGGTG......................................1812.0021001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAAACGGTGTAGTTAAC..............................2111.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCT-----------------------------------------TCAGTGGCTG----------------------AGTTGGA.............................................2311.0010010
..................................................................................................................................................................................................................................................................................................................................TGAATTATC-------GATAAC-------AAGAAGC-----A........................................................................................................................................................................................2311.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGTTAACGTAATGGAATCGAT................2311.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTG----------------------AGTTGGAAACGGTGTA....................................2011.0010010
....................................................................................................................................................................................................................................................................................................................................................TAAC-------AAGAAGC-----AA-AAAGGTTACATGA.........................................................................................................................................................................2611.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CT-----------------------------------------TCAGTGGCTG----------------------AGTTGG..............................................1811.0010010
dm3
TTTCGTATAT--------------------ACTTTGAAAAT--------------------------------------------------------------------A------------------AAGCTAAAAAGTAGTGGCTTATTA-ATTTATATTTAT----------------TTATTT---CTCGACATGACATGCCCATTGTGGGGTTAATATTTCTGTTTCTG-TAATCAGTGTTCCCACTCCAGAGTTC----TTT----------------------------------------------------ACTGAATTATC-------GATAAC-------TAGAAGC-----AA-AATGGTTGCATGCATATTAATTT-ATGTATTGTAGTTTACAATTTAATTGAGTATCG-----------------------------------------TCAGTGGTTGC---------------------AGCTGGAAACGGTGTAGTTAACGTAATGGAATCGATTACCTTTGGAGTTTTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................AATTGAGTATCG-----------------------------------------TCAGTGGTTGC---------------------....................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000101300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AATTGAGTATCG-----------------------------------------TCAGTGGT............................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200200000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AATTGAGTATCG-----------------------------------------TCAGTGGTTG..........................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000001000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TATCG-----------------------------------------TCAGTGGTTGC---------------------AGCTGGA.............................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------------------------TCAGTGGTTGC---------------------AGCTGGAAACGGTG......................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGTTGC---------------------AGCTGGAAACGGTGT.....................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------------------------------------TCAGTGGTTGC---------------------AGCTGGA.............................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGAATCGATTACCTTTGGAGT....2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGTGTAGTTAACGTAATGGA......................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................ACTGAATTATC-------GATAAC-------TAGAAGC-----A........................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GTAGTTTACAATTTAATTGAGTATCG-----------------------------------------....................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGC---------------------AGCTGGAAACGGT.......................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGAAACGGTGTAGTT.................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGTGTAGTTAACGTAATGGAA.....................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GTTTACAATTTAATTGAGTAT...............................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................GATAAC-------TAGAAGC-----AA-AATGGT................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC---------------------AGCTGGAAACGGTGTAGTTAACG.............................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTGC---------------------AGCTGGAAACGGTGTAGT..................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------------------------------------TCAGTGGTTGC---------------------AGCTGGAAACGGTG......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGC---------------------AGCTGGAAACGGTGTAGTT.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGAAACGGTGTAGTTAACG.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AATTTAATTGAGTATCG-----------------------------------------TCAGTGGTTGC---------------------....................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGGTTGC---------------------AGCTGGAAACGG........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGAGTATCG-----------------------------------------TCAGTGGTTGC---------------------A...................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TACAATTTAATTGAGTATCG-----------------------------------------TCAGTG..............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................................................................................................................................................................................................ATGACATGCCCATTGTGGGGT...........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAGTTAACGTAATGGA......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGTTGC---------------------AGCTGGAAACGGTG......................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAGTATCG-----------------------------------------TCAGTGGTTGC---------------------AGCTGG..............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTGAGTATCG-----------------------------------------TCAGTGGTTGC---------------------A...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................TT---CTCGACATGACATGCCCATTGTG...............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTAGTTAACGTAATG........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................ATC-------GATAAC-------TAGAAGC-----AA-AATGGT................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAACGTAATGGAATCGATTA..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TAT----------------TTATTT---CTCGACATGAC...........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AATTATC-------GATAAC-------TAGAAGC-----.........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AT--------------------------------------------------------------------A------------------AAGCTAAAAAGTAGTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGGTGTAGTTAACGTAA..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAGTATCG-----------------------------------------TCAGTGGTTGC---------------------AGCTGGAA............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAGTATCG-----------------------------------------TCAGTGGTTGC---------------------....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATCG-----------------------------------------TCAGTGGTTGC---------------------AGC.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------------------------------------TCAGTGGTTGC---------------------AGCTGG..............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTAGTTAACGTAATGGAA.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGGAAACGGTGTAGTTAAC..............................2211.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTACAATTTAATTGAGTATCG-----------------------------------------TCAGTGG.............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------------------------------------TCAGTGGTTGC---------------------AGCTGGC.............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------------------------------------TCAGTGGTTGC---------------------AGCTG...............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AATTTAATTGAGTATCG-----------------------------------------TCAGTGGT............................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGTATCG-----------------------------------------TCAGTGGTTG..........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATCGATTACCTTTGGAGTTTT.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ATCG-----------------------------------------TCAGTGGTTGC---------------------AGCTG...............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ATCG-----------------------------------------TCAGTGGTTGC---------------------AGCTGGA.............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................ATC-------GATAAC-------TAGAAGC-----AA-AATGGTTG..............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTGC---------------------AGCTGGAAACGGT.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.......................................................................................................................................................................................ATTT---CTCGACATGACATG........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTAACGTAATGGAATCGATTACC............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGC---------------------AGCTGGAAACGGTG......................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................ATCAGTGTTCCCACTCCAGAG..................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------------------------------------TCAGTGGTTGC---------------------AGCTGGAAACGGTGT.....................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTATCG-----------------------------------------TCAGTGGTTGC---------------------AGCTGGA.............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGC---------------------AGCTGGAAACGGTGT.....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTGAGTATCG-----------------------------------------TCAGTGGTTGC---------------------AGC.................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGAGTATCG-----------------------------------------TCAGTGGTTGC---------------------AGC.................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................CATGCCCATTGTGGGGTTAA........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................AC-------TAGAAGC-----AA-AATGGTTG..............................................................................................................................................................................1911.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------------AGCTGGAAACGGTGTC....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAAACGGTGTAGTTA................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGGAATCGATTACCTTTGGA......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AGTTTACAATTTAATTGAGTATCG-----------------------------------------TC..................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATCG-----------------------------------------TCAGTGGTTGC---------------------....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAAACGGTGTAGTTAAC..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAACGGTGTAGTTAACGTAATGGAA.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TTATTA-ATTTATATTTAT----------------TT.............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTGAGTATCG-----------------------------------------TCAGTGG.............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGTTAACGTAATGGAA.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAACGGTGTAGTTAACGT............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ACAATTTAATTGAGTATCG-----------------------------------------TC..................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TACAATTTAATTGAGTATCG-----------------------------------------TCAGT...............................................................................2511.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AATTGAGTATCG-----------------------------------------TCAGTGGTTGC---------------------A...................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTATCG-----------------------------------------TCAGTGGTTGC---------------------AGC.................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........T--------------------ACTTTGAAAAT--------------------------------------------------------------------A------------------AAGCTAAA............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------------------------------------TCAGTGGTTGC---------------------AGCTGGG.............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------------------------------------TCAGTGGTTGC---------------------AGCTGGAAACGGT.......................................2611.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGC---------------------AGCTGGAAACGGTGTA....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................ATTA-ATTTATATTTAT----------------TT.............................................................................................................................................................................................................................................................................................................................................................................1890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTTTATGTAT--------------------ACTTTGAAAAT--------------------------------------------------------------------AGGGTGCAACTAGATTTTAAAGATAAAAACTAGTGTTTTATTG-TTTTATATGTAC----------------ATATTTATTATTGACATGACATGCCCATTGTTGGGTTAATGCTTCTGCTCCCG-TATTCAGTGTTCACCCTCCAGAGTTT----ATT----------------------------------------------------ACTGAATTATC-------GATAAC-------AAAAAGC-----AA-AAAGGTTGCATGCTAATT----T-ATGTATTGTAGTTTACAATTTAATTGAGTATCG-----------------------------------------TCAGTGGGAGC---------------------AGTTAGAAGCGGTGTAGTTAACGTAATGGAATCGATTACCTTTGGAGTTTTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTAGTTAACGTAATG........................1811.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................TATCG-----------------------------------------TCAGTGGGAGC---------------------AGTTA...............................................2111.0010100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCG-----------------------------------------TCAGTGGGAGC---------------------A...................................................1811.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATCG-----------------------------------------TCAGTGGGAGC---------------------....................................................1811.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTGTAGTTAACGTAATGGA......................2311.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCGGTGTAGTTAAC..............................1811.0010000010
droYak3
TTTTATCTAC--------------------ACTTTGGAAAT--------------------------------------------------------------------AAGGTGCAATTAGATTTT-------AAAGC-------T----G-TCTTATATGTAT----------------TTATTT---ATTGACATGACATGCCCATTGTAGGGTTAATGCTTCTGCTCCCG-TAATCAGTGTTTACACTCCAGAGTTC----AGT----------------------------------------------------A-TAAATTATC-------GATAAA-------A-----C-----GAAACCGGTTGCACGCTAATT----T-TTGTATTGTATTTTATAATTTAATTGAGTATCG-----------------------------------------TCAGTGGGAGC---------------------AGTTAGAAGCGTCATAGTTTACGTAATGGAATCGGTTACCTTTGGAGTTTTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAGTATCG-----------------------------------------TCAGTGGGAGC---------------------A...................................................2011.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTAATGGAATCGGTTACCTTTGGAGT....2911.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------------------------TCAGTGGGAGC---------------------AGTTAGAAG...........................................2111.00100000010000
droEug1
ACTTTTAGAG--------------CCAATTATTTTA--------------------------------------------------------------------------------------------------AAAAC-------G----ATACATATATTTAT----------------TTATTT--TATAAACATTTTTTGCCCTTGATAGGGTTAAAGCTCCAGCCATCG-AAATCAGTGTTTACACACCACAATTC----AGT----------------------------------------------------AATCGCTTATC-------GATAAC--CAC-CC-AAAGC-----AA-AAAGTTGGCGTGCTAATT----T-ATGTATTGTATTCAACAATTTAATTGTCAGTT----------------------------------------TGTCAGTGGGATC---------------------AGTTGAAACCGGTGCAAATGACGTAATGGAGTCGATTACTTTTGGAGTACTASizeHit CountTotal NormTotal
No Reads
droBia1
TACATAGT---------------------------------------------------------------------------------GTGTATTATACCTTAAATTGG------------------AAGTGAGAAAC-------TTA--ATATTTATATTTATTTTTCATATTATATGTGCAATT---AT-----TGACATGCCCATCGTAGGGTTAAAGCTTCAGCCGGCG-AAACCAGTGTTCACACACTAAGTTCATTTCC----G-A---TGT------------------------------------------ATCGCCTATCGATTACCGATAAA-CCAC-CTGCATGC-----GG-AAAGCTTGCGTGCTAATT----T-ATGTATTGAATTTAACAATTTAATTGAGAATCG-----------------------------------------TCAGTGGGAGC---------------------TGTTCTAACCGCTGTGGCTGACGTAATGGAGTCGATTACCTTTGGAGTTCTGSizeHit CountTotal NormTotal
No Reads
droTak1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACATGCCCGCTGAAGGGTTAAAGCTTCTG--------AGCCAGTGTTCACACACCAGAATCT----TTTTCC-A---AGT-----------------------------------------TATCGCTTATCGATAGCCG------CCAC-CTGCAAGC-----GG-AAAGTTTGCGTGCTAATT----TGATGTATTGTATTTAACAATTTAATTGGGATTCG-----------------------------------------TGAGTGGGAGC---------------------AACCAGAACCGCTGCACATGACGTAATGGAGTCGATTACCTTTGGAGTTCTGSizeHit CountTotal NormTotal
No Reads
droEle1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACATGCCCGTTTAAGGGTTAAAGCTTCAGCCGGCA-AAATCAGTGTTCACACACCAGATTTC----CAT----------------------------------------------------ACTAAGTTATC-------GATAATTCCAT-CAG-CGGC-----GG-AAAGTTTGCGTGCTAATT----T-ATGTATTGTATTTAACAATTTAATTGCAGATCG-----------------------------------------TCACTCAAAGC------------------AGAAGTTCAAACCGCTGCAGATGACGTAATGGAGTCGATTACCATTGGAGTTCTGSizeHit CountTotal NormTotal
No Reads
droRho1
AACTATGT---------TCCAA--------GCTTTAAACAA--------------------------------------------------------------------A-----------------------------------------ATATTTAAATTCATACATCAC---------ACATTT---AT-----TGACATGCCCATTGTAGGGTTAAAGCTTTAACCGGCG-AAATCAGTGTGCACACACCAAATTTC----CTC----------------------------------------------------ACTGAGTTATC-------GATATAAGTAT-CAG-CGGC-----GG-AAAGTTTGCGTGCTAATT----T-ATGTATTGTATTTAATAATTTAATTGAGGATCG-----------------------------------------TCACTTGGAGC---------------------AGTTGAAACCGCTGCACATGACGTAATGGAGTCGATTATCTTTGGAGTTCTGSizeHit CountTotal NormTotal
No Reads
droFic1
TTT-ATATTAACCTTGTTCCGGACCCA---------ATAATGTAGTTGTATATTAAAA------------------------------------------------------------------------------------------------------------------------------------AT-----TAGCAGGCCCAATGAAGGGTTAAAGCTTTA-CCGGCG-AATTCAGTGTGTACACACTAGATTTC----GAT----------------------------------------------------ATTGAGTTATC-------GATAAATATAA-AAGCAAGC-----GGAAAAGTTTGCGTGCTAATT----T-ATGTGTTGAATTTAATAATTTAATTGGGATTCT-----------------------------------------TCGCTCAGAGC---------------------AGTTGAAACCGCTGCGAATGACGTAATGGAGTCGATTATTTTTGGAGTTCTTSizeHit CountTotal NormTotal
No Reads
droKik1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGTTTGCGTGCTAATT----C-A----TTTTATTTAATTATTTCATTTACGCTCG-----------------------------------------CCACT------------------------------TGACAGTAATGCCCATTACGTAATGGAGGCTATTACCTTTGGAGTTCTGSizeHit CountTotal NormTotal
No Reads
droAna3
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTAAACAATTTAATTGCCGATCG-----------------------------------------TCGAGTGGAGA---------------------GCTT-GAA---GAGCCAATGACGCAATGGACGTGGTTTACTTTGGAGTTCTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGACGCAATGGACGTGGT................2011.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGA---------------------GCTT-GAA---GAGCC....................................1911.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACGTGGTTTACTTTGGA......1911.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................ACAATTTAATTGCCGATCG-----------------------------------------TCGAGTG.............................................................................2611.001001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------------------------TCGAGTGGAGA---------------------GCTT-GAA---GAGCC....................................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAATTGCCGATCG-----------------------------------------TCGAGTGGAT..........................................................................2611.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA---GAGCCAATGACGCAAT.........................1911.001010000
droBip1
TATTTAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGTTAATTTGATTGTTGATCG-----------------------------------------TTTAGTGAAAA---------------------AGCTTGAAT---AGCAAATGACGCAATGGAAGCCGTTCAATTTGGAGTACTASizeHit CountTotal NormTotal
No Reads
dp5
CTGTGCATAT---T-----------------------------AGTATTC----------------------TGCGACTTTAAGGAAACATTCATTATATCTTAAATTA-------------------------AAC---------------------------------------------------------------------------------------------GGCA-GCGGCAGTGTGTGCACACCTACCAGA-TTGG----TCGCAATGT-CGAAATGTCCTAAAAAATG-CTAAAAGCC--------AACA-CG----------------------TTC-CAG-CGGTCGAAAGTAT-------CGTGCCAA--------------------------------------ACGCTCTTCTCAA-AATTTAATTGCAAA------------CGTGCCGTCGACATTAGATATAAGCTATAACTCGGAATCGCAAAGTAATGCCAATGACATAATGGATCCAATTACTTTCGGTGTTTTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......TAT---T-----------------------------AGTATTC----------------------TGCGACTTTAAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000300
............................................................................................CATTATATCTTAAATTA-------------------------AAC---------------------------------------------------------------------------------------------GGCA-GCGGC....................................................................................................................................................................................................................................................................................................................2911.0010010000000
....................................................................................................................................................................................................................................................TGTGCACACCTACCAGA-TTGG----......................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCGGAATCGCAAAGTAATGCCA...................................2511.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCGACATTAGATATAAGCTATA...........................................................2511.0010000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATAAGCTATAACTCGGAATCG................................................2411.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................GAAAGTAT-------CGTGCCAA--------------------------------------ACGCTCT.........................................................................................................................2311.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATAATGGATCCAATTACTTTCGGT......2711.0010100000000
droPer2
CTGTGCATAT---T-----------------------------AGTATTC----------------------TGCGACTTTAAGGAAACATTCATTATATATTAAATTA-------------------------AAC---------------------------------------------------------------------------------------------GGCA-GCGGCAGTGTGTGCACACCTACCGGA-TTGG----TCGCAATGT-CGAAATGTCCTAAAAAATG-CTAAAAGCC--------AACA-CG----------------------TTC-CAG-CAGTCGAAAGTAT-------CGTGCCAA--------------------------------------ACGCTTTTCTCAA-AATTTAATTGCAAA------------CGTGCCGTCGACATTAGACATAAGCTATAACTCGGAATCGCAAAGTAATGCCAATGACATAATGGATCCAATTACTTTCGGTGTTTTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA------------CGTGCCGTCGACATTAGAC.....................................................................2213.003300000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAA------------CGTGCCGTCGACATTAGAC.....................................................................2713.003300000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------CGTGCCGTCGACATTAGACATAAGCT..............................................................2813.003300000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAAA------------CGTGCCGTCGACA...........................................................................2012.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAA------------CGTGCCGTCGACATT.........................................................................2112.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAA------------CGTGCCGTCGACATTAG.......................................................................2111.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACATAAGCTATAACTCGGA....................................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA------------CGTGCCGTCGACATTAGACATAAGCT..............................................................2911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAA------------CGTGCCGTCGACATT.........................................................................1911.001100000
......................................................................................................................................................................................................................................GGCA-GCGGCAGTGTGTGCA..........................................................................................................................................................................................................................................................................................................1911.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAA------------CGTGCCGTCGACATTAGA......................................................................2311.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTATAACTCGGAATCG................................................1811.001000100
.......................................................................................................................................................................................................................................................................................................................................................................GAAAGTAT-------CGTGCCAA--------------------------------------ACGCTTTT........................................................................................................................2411.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------CGTGCCGTCGACATTAGAC.....................................................................2011.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATAAGCTATAACTCGGA....................................................2011.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAATTGCAAA------------CGTGCCGTCGAC............................................................................2511.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGAATCGCAAAGTAATGCCAATGA...............................2711.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCCGTCGACATTAGAC.....................................................................1911.001100000
droWil2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACGTAATGGAGTCCATAACATTTGGTGTATTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTAATGGAGTCCATAACATTTGGT......2711.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGGAGTCCATAACATTTGGT......2411.00100010
droVir3
ATTTAA-TAT---T-----------------------------AATATTACGTTAAAAATCCGAGTGAAACTTGCAATTTT--------------------------GA-------------------------AAT-------------------------------------------------------------GGCA-------------------------------A-AAACAAGTGTGTACACACTCAAGCAATTTGG----T-G---TGTACAAAATGTGCTAAAA-ATGCCCAAAAGCCTTACCCTCAAAA-TG----------------------GTCAAAG-CAATCGAAAACAT--------------TTTTTTTT-GAGTGCTAA---------------------ACGTTTTATTAAACAATTTAATTGAAAGTAACAAACGCTGCGTGCCACTCAGATT--------------------------------ATATAAATGTTGCCATGGAGTCGATTACGTTCGGAGTATTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACGTTCGGAGTATT.1812.002100000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAACGCTGCGTGCCACTCAG............................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAAACGCTGCGTGCCACTCA.............................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTT-GAGTGCTAA---------------------ACGTTTT.........................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAAACGCTGCGTGCCACTCAGATT--------------------------------.........................................2811.001100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................ATTTGG----T-G---TGTACAAAATGTGCTAA...............................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAAATGTTGCCATGGAGT....................2111.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCATGGAGTCGATTACGTTCGGA......2511.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGAGTCGATTACGTTCGGA......2411.001000000001000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGTCGATTACGTTCGG.......1911.001000000001000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGTCGATTACGTTCGGA......2111.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAGTCCATTACTTTTGGAGTTCTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATGTCGCCATGAATCCGATAACGTTTGGCGTTTTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATCCGATAACGTTTGGC......2111.00101
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCGCCATGAATCCG..................1811.00110
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCCGATAACGTTTGGCGTTTT.2411.00101
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCGCCATGAATCCGATA...............2111.00110

Generated: 05/18/2015 at 11:37 AM