ID:dsi_17477 |
Coordinate:3l:15682001-15682150 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
CDS [3l_15682151_15682295_+]; exon [3l_15682151_15682295_+]; intron [3l_15681030_15682150_+]
No Repeatable elements found
| --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## TGTTTAGTATAAACTAACTCCCGCTGCATTCGAATGATTCAAGACACGGCATAGCTTCTTGTAAGAACAAATACATCGCACACAACCCAAACAAATACGACAATTATAGAGAAACATTTCAAAACAAATATATTATATATTTAACATTGTATCTTCATAACTGAATTGAGCAATTGGTAAATGGTTCCTTATCCATGCAGTTCAAGTTGGAGGACATAACCAGCGGTGGCACATATCCGCCCAACAACAG **************************************************...((....((((........))))..)).......((((..........((.((((.((((.(((.........(((((((...))))))).....))).)))).)))).))..........))))...((((........))))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
M023 head |
SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................................TTGGAGGACATAACCAGCGGTGGCACA................. | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..................................TGTTTCAAGACACGG......................................................................................................................................................................................................... | 15 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 |
| ......................................................................................................................................................................................................AGTTCAAGTTGGAGGACATTACCAGC.......................... | 26 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..........................................GACGCGGCATAGCTTCTTGT............................................................................................................................................................................................ | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ............................................................................................................................................................................................................AGTTGGAGGACATAACCA............................ | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ...............................................................AGAACATATCCATCGCA.......................................................................................................................................................................... | 17 | 2 | 20 | 0.20 | 4 | 0 | 0 | 0 | 4 |
| ............................................................................................................................................................................................................AATTGGAGGGCATAACC............................. | 17 | 2 | 16 | 0.06 | 1 | 0 | 0 | 0 | 1 |
| ...........................................................................................................................................................................................................TAGATGGAGGACTTAACC............................. | 18 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
|
ACAAATCATATTTGATTGAGGGCGACGTAAGCTTACTAAGTTCTGTGCCGTATCGAAGAACATTCTTGTTTATGTAGCGTGTGTTGGGTTTGTTTATGCTGTTAATATCTCTTTGTAAAGTTTTGTTTATATAATATATAAATTGTAACATAGAAGTATTGACTTAACTCGTTAACCATTTACCAAGGAATAGGTACGTCAAGTTCAACCTCCTGTATTGGTCGCCACCGTGTATAGGCGGGTTGTTGTC
**************************************************...((....((((........))))..)).......((((..........((.((((.((((.(((.........(((((((...))))))).....))).)))).)))).))..........))))...((((........))))....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR553485 Chicharo_3 day-old ovaries |
GSM343915 embryo |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................TTGGTACGTCAAGTTC............................................ | 16 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................TTGGTACGTCAAGTT............................................. | 15 | 1 | 10 | 0.30 | 3 | 2 | 1 | 0 | 0 |
| ......................................ATTTCTGTGCCGCGTCGAA................................................................................................................................................................................................. | 19 | 3 | 14 | 0.07 | 1 | 0 | 0 | 1 | 0 |
| .....................................................................................................................................................................................ACCAACGAATTGGTACGT................................................... | 18 | 2 | 16 | 0.06 | 1 | 0 | 0 | 0 | 1 |
| ..............................................................................................................................................................................................TTGGTACGTCAAGTTCT........................................... | 17 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 |
Generated: 04/23/2015 at 05:32 PM