ID:

dsi_1747

 Coordinate:

3l:20743156-20743305 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.6 -20.4 -20.4 -20.2

Flybase annnotation

five_prime_UTR [3l_20742938_20743155_-]; exon [3l_20742638_20743155_-]; intron [3l_20743156_20745726_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATGCCCACATCCACATCGAGCTCCGATGGCGCATTCCGTTGCAGACCGCCGGCCGAGGCAGTCGATTCATTAGTAACCTCCAACGGCATTGTAAATTGGGAGTGGGAAATCGGCGAATCGCCAAAATAAACAAGCTACCAACTAGCCGCTTGCCGTTCAGCATTCGTTAATAGCTTTGTTTTCATTCTGGTTTTGTGCAGGTTTCTGTGCAGAACCCAAAAACACAGTCAAAACCATTCCGAAGCCGAAA
******************************************************************************************......((((((((((((....((((((.((.........(((((............))))).......))))))))...........)))))))))).........))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 M025
embryo
 O002
Head
 SRR902009
testis
......................................................................................CATAGTAAATTGGGA..................................................................................................................................................... 15 1 14 15.43 216 125 40 0 29 22 0 0 0 0 0 0
......................................................................................CATAGTAAATTGGGAG.................................................................................................................................................... 16 1 4 1.50 6 2 1 0 1 2 0 0 0 0 0 0
.......................................................................................ATAGTAAATTGGGAG.................................................................................................................................................... 15 1 8 1.38 11 6 3 0 1 1 0 0 0 0 0 0
..........................................................................................GTAAATTGGGAGTGGGAAATCGGC........................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................TTTCATTCTGGTTTTGTGCA................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..............................GCATTCCGTTGCAGACCGCCGGCCGAG................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................CCTCTTACCGTTCAGCATTCGA................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.............................................................TCGATTCATTAGTAACCTCC......................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
.......................................................................................ATAGTAAATTGGGAGT................................................................................................................................................... 16 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................GTCGATTCATTAGTAACCTCCAACGG.................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................GCAGTCGATTCATTAGTAACCTC.......................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
................................ATTCCGTTGCAGACCGAC........................................................................................................................................................................................................ 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................TCCAACGGCATTGTAAAT.......................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.......................................................AGGCAGTCGATTCAT.................................................................................................................................................................................... 15 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
............ACATCGAGCTCCGATGGCGCA......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................................CATTGTAAATTGGGA..................................................................................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TCCAGAACCCAAAAACA.......................... 17 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................ATAGTAAATTGGGAGGG.................................................................................................................................................. 17 2 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................GTCATTGTAAACTGGGA..................................................................................................................................................... 17 2 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................GACATAGTAAATTGGGA..................................................................................................................................................... 17 2 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0
...............................................GCCGGTCGAGGAAGTCG.......................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

TACGGGTGTAGGTGTAGCTCGAGGCTACCGCGTAAGGCAACGTCTGGCGGCCGGCTCCGTCAGCTAAGTAATCATTGGAGGTTGCCGTAACATTTAACCCTCACCCTTTAGCCGCTTAGCGGTTTTATTTGTTCGATGGTTGATCGGCGAACGGCAAGTCGTAAGCAATTATCGAAACAAAAGTAAGACCAAAACACGTCCAAAGACACGTCTTGGGTTTTTGTGTCAGTTTTGGTAAGGCTTCGGCTTT
***************************************************......((((((((((((....((((((.((.........(((((............))))).......))))))))...........)))))))))).........))****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body
............................CGCGTGAGGCAACGTCTGG........................................................................................................................................................................................................... 19 1 1 1.00 1 0 1 0 0
....................................................................................................................................................GAACGGCAAGTCGTAAGCAAT................................................................................. 21 0 1 1.00 1 1 0 0 0
....................................................................................................................................TCGATGATTGACCGGGGAA................................................................................................... 19 3 10 0.10 1 0 0 0 1
.......................................................................TCATAGGGGGTTGCCGT.................................................................................................................................................................. 17 2 11 0.09 1 1 0 0 0
.................................................................................................................................................GGAGAACTGCAAGTCGT........................................................................................ 17 2 16 0.06 1 0 0 1 0
.............GTAGCTCGAGCCCCCCGCG.......................................................................................................................................................................................................................... 19 3 16 0.06 1 0 1 0 0
..........................................TTGGGCGGCCGGCTCC................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:20743106-20743355 - dsi_1747 A-----------TGCCCACATCCACATCGAGCTCCGATGGCGCATTCCGTTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAGTAACCT-------CCAAC----GG----CATTGT---------------------A--AATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTAC------CAA----CTAGCCGCTTGC---CGTTC-----AGCA-TT------------------------------------------CGTTAATAGCTT-TGTTTTCATT--C--TGGTT----------------------------TTGTGCAGGTTTCT-------------------------------------------GTGCAG-------------------------------AACCC-AAAA--ACACAGTCAAAACCA-------------------------------TTCCGAAGCCG-----------------AA-A
droSec2 scaffold_11:1147080-1147329 - A-----------TGCCCACATCCACATCGAGCTCCGATGGCGCATTCCGTTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTAATCAGTAACCT-------CCAAC----GG----CATTGT---------------------A--AATTGGGAGTGGG-AAATCTG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTAC------CAA----CTAGCCGCTTGC---CGTTC-----AGCA-TT------------------------------------------CGTTAATAGCTT-TGTTTTCATT--C--TGGTT----------------------------TTGTGCAGGTTTCT-------------------------------------------GTGCAG-------------------------------AACCC-AAAA--ACACAGTCAAAACTA-------------------------------TTCCTAAGCCG-----------------AA-A
dm3 chr3L:21193563-21193815 - A-----------TGCCCACATCCACATCGAGCTCCGATGGCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTAAATAGTAACCT------CCAAAC----GG----CATTGT---------------------A--AATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTAC------CAA----CTAGCCGCTTGC---TGTTC-----AGAA-TC------------------------------------------CGTTAATAGCTT-TGTTTTCATT--C--TGGTT----------------------------TTGTGCAGGTTTCT-------------------------------------------GTGCAG-------------------------------AACCC-AAAAACACACAGTCAAAACCA-------------------------------TTCCGAAGTCG-----------------AA-A
droEre2 scaffold_4784:20878275-20878531 - G-----------TGCCCACATCCACACCGAGCTCCGATGGCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAGTGATCT-------CCAAC----GGCGGGCATTGT---------------------A--AATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTGCCGC---CAA----CTAGCCGCTTGC---TGTTC-----AGAA-TC------------------------------------------CGTTAATAGCTT-TGTTTTCATT--C--TGGTT----------------------------TTGTGCAGGTTTCT-------------------------------------------GTGCAG-------------------------------AACC-AAAAC--ACACAGTTAAAACCA-------------------------------TTCCGAAGCCG-----------------AA-A
droYak3 3L:19332001-19332248 + G-----------TGCCCACATCCACATCGAGCTCCGATGGCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAGTAATCC-------ACTAC----GG----CATTGT---------------------G--AATCGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTAC------CAA----CTAGCCGCTTAC---TGTTC-----AGAA-TC------------------------------------------CGTTAATAGCTT-TGTTTTCATT--C--TGGTT----------------------------TTGTGCAGGTTTCT-------------------------------------------GTGCAG-------------------------------AACC-AAA----ACACAGTCAAAACCA-------------------------------TTCCGAAGCCG-----------------AA-A
droEug1 scf7180000409711:4805236-4805500 + AA--TC----------------C---TCAATCCCCAATGGCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCGATTC----------------AATTCATTAATAATCT-------CTAAA----GA----------------------------------TATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTAC------CAA----CTAGACGCTAAC---TGTTC-----AGAA-TCCC---------ATAAC-----------CGAATCGCGT----CCGCTAATTGCTT-TGTTTTCATT--C--TGGTT----------------------------T---------TTCT-------------------------------------------GTGCAGTCCAA-ACCGAAA------------ACTGAAAACC-AAAAA--CCAAAGTTAAAACCA-------------------------------TTCCGAAGCCG-----------------AA-A
droBia1 scf7180000302193:4839946-4840200 + AA--TCCCCGAGAGCCCACAGC-----------------GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAATAACCT-------CCA-C----GG----------------------------------AATTGGGAGTGGG-AAATCCG-CGA---------------GTC---------------------CGG-CCAA------------AACAA----ACAAGCTAC------CAA----CTAGCCGCTAAC---TGTTT-----GGAAGTCC----------CGAGC-----------CAAATCGCGT----CCGCTAATTGCTT-TGTTTTCATT--C--TGGTT----------------------------T---------TACT-------------------------------------------GTGCAGTCCGAGGGCAA-------------GCCT---------GAAA--CCAGAGTCAAAACCG-------------------------------TTCCGAAGCCG-----------------AA-A
droTak1 scf7180000414337:383920-384154 + A-----------T--------------------------GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG--TCGA----------------TTCATTAATAATCT-------CCAAC----GG----AATCGG-------------------GGG--AATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTAC------CAA----CTAGCCGCTAAC---TGTTC-----AGAA-TCC----------CCAGT-----------CGAATCGCGT----CCGCTAATTGCTT-TGTTTTCATT--C--TGGTT----------------------------T---------TTCT-------------------------------------------GTGCAGTCCA----------------------------------AAA--CCAAACTCTAAACCA-------------------------------TTCCGAAGCCG-----------------AA-A
droEle1 scf7180000491193:2153897-2154155 + ---------------------------------------GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAATAATCT------TCCAAC----GG----CATTGG------------------AATTAAAATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTCC------CAA----CTAGCCGCTAAC---TGTTT-----AGAA-TC---------------------------CGAGCCGCGT----CCGCTAATTGCTT-TGTTTTCATT--C--TGGTT----------------------------T---------TTCT-------------------------------------------GTGCAGTCCAAAACCAAAAACCGAAAACAAACTTA--AAACC-AAAC--TCAAAACCCAAACCA-------------------------------TTACGAAGCCG-----------------AA-A
droRho1 scf7180000779803:28723-28955 - GA--TCC---------C------------------AAT-GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAATAATCT-------CCAAC----GG----------------------------------AATCGAGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA----------AAAATAA----ACAAGCTCC------CAA----CTAGCCGCTAAC---TGTTC-----AGAA-TC---------------------------CGCATCGCGT----CCGCTAATTGCTT-TGTTTTCATT--C--TGGTT----------------------------T----------TCT-------------------------------------------GTGCAGTCCAAAACCGA-------------ACT-------C-AAA--------ACTGAAAACCA-------------------------------TTCCGAAGCCG-----------------AATA
droFic1 scf7180000453929:345461-345713 - GA--TCC---------C------------------AAT-GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----G----------------TTCATTAATAATCT-------CTAAC----AG----AATTGT---------------------G--GATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCCAC------CAACCAACTAGCCGCTAAC---TGTTC-----AGAA-TC---------------------------CGAGTCGCGT----TCGCTAATTGCTT-TGTTTTCATT--C--TGGTT----------------------------T---------TTCT-------------------------------------------GTGCAGTCCGTAACCGA-------------AACTG--AAACC-AAAA--CCAAAGTCAAAACCA-------------------------------TTCCGAAGCCG-----------------AA-A
droKik1 scf7180000302260:121666-121933 + CGCGTCC---------C------------------CAT-GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCGTT-----CTCCG----TC-ATCTCCATCAATAATCG-------CCGAG----AG----AACTGA-------------------CAG--AATTGGGAGTGGG-AAAACGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTTC------CAA----CTAGCCGCTAAC---TGTGC-----GGAA-TCCCC-----------------------------CG-GTCCCCCTGCTAATTGCTT-TGTTTTCATT--C--TGGTT---------------------------------------TCT-------------------------------------------GTGCAGTCCAAAA-------------------CT---------CAAA--CCAAAGTCAAAACCATTCCGTTCCGACTCCGA--------------TTCCAAAGCCG-----------------AA-A
droAna3 scaffold_13337:8504324-8504571 + --------------------------------TGCGA-GGCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCGCTTC----------------CCTTCATTAACAAT---------CCAAC----GG----CAC---------------------------AACTGGGAGTGGG-AAATC-----------------------------------------------G-CCAAAAATAACGAAAAAATAAACAAACAAGCTCC-----CCAA----CTAGCCGCTAAC---AGTTG-----AGAA-TCTCC--------CCAAA-----------CGAAACGAG------CGCTAATTGCTT-TGTTTTCATT--C--TGGTT---------------------------------------TCT-------------------------------------------GTGCAGTTCCA--------------------------------AAAG--CCAAAGCCAGAGTCA-------------------------------TTCCGAAGCCGAAACCG-----------AA-A
droBip1 scf7180000396541:644510-644731 + --------------------------------TGCGAT-GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAACA---------------------------------------------------------ACTGGGAGTGGG-AAAT------------------------A-----------------------A-CCAAAAATAAA-AAAAAATAAACAAACAAGCTCC------AAA----CTAGCCGCTAAC---AGTTC-----AGAA-TCCAT--------CCAAA-----------CGAAACGAG------CGCTAATTGCTT-TGTTTTCATT--C--TGGTT---------------------------------------TCT-------------------------------------------GTGCAGTTCGA--------------------------------AAAG--CCAAAGCCAGAGTCA-------------------------------TTCCGAAGCCG-----------------AA-A
dp5 XR_group6:12566253-12566626 - ---------------------------------------GCGCATTCCACTGCAGAACGCCGGCCGTGCCAGACC-----ATAGCGG---GTCTCTCTTGATTAATAATCA-------CTAACAAACAATCGC----TCGGGAAGGGAAGGGAATGGAACG--GAATGGTAGTGGGTAAAACGGTCGA-------------ACATC-----------------------G-CCCA------------AATAG----ACAAGCATCCATCCGAAA----CTACCCGCTAAC---TCTTTTTTTGGGAA-CCCACATATTCTCA--TAAGAATCGAACGCGAGACGCGC----TTGCTAATTGCCT-TGTTTTCTGTTTCCCTGGTCTGTGGTGTTTGGTGTTCGGTGTTTGGTG-----CCG----CCTCGACTCGACTCTCCGTTTCCTGTTGGCGTGTTCGTGTTCCCAGTGCAGTTCGCAGA--------------------------C-AAAA----------CAAACAAA-------------------------------TTGCAAAGCCA-----------------AA-A
droPer2 scaffold_33:587118-587486 - ---------------------------------------GCGCATTCCACTGCAGAACGCCGGCCGTGCCAGACC-----ATAGCGG---GTCTCTCTTGATTAATAATCA-------CTAACAAACAATCGC----TCGGGAAGG-----GAATGGAATG--GAATGGTAGTGGGTAAAACGGTCGA-------------ACATC-----------------------G-CCCA------------AATAG----ACAAGCATCCATCCGAAA----CTACCCGCTAAC---TCTTTTTTTGGGAA-CCCACATATTCTCA--TAAGAATCGAACGCGAGACGCGC----TTGCTAATTGCCT-TGTTTTCTGTTTCCCTGGTCTGTGGTGTTTGGTGTTCTGTGTTTGGTG-----CCG----CCTCGACTCGACTCTCCGTTTCCTGTTGGCGTGTTCGTGTTCCCAGTGCAGTTCGCAGA--------------------------C-AAAA----------CAAACAAA-------------------------------TTGCAAAGCCA-----------------AA-A
droWil2 scf2_1100000004963:1300436-1300501 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA------------AATAA----ATAAACTAA------CAA----TTAGACGCAAAC---TCATT-----TGTA---------------------------------------A----TTGTCCATTTCTT-CGCTTTCATT--T--T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:20430898-20431086 - ------------------------------------------CATTCCGCTGCAGAACGCCAGCCGAGACAGTCG-----C----------------------------------------------------------------------------------AGCTGAGCGTGTC---TT-----AA---------------GCA---------------------CAG-CTA----------------AA----ACAAGCTAC------TAA----CTT-TTGCTAAC---TGTCT----GCGAA-GCCAA--------AAAAA-----------AAAAACG-------AAGCTAATTGCTT-TCTTATTATT--CATTGGTT----------------------------CTGTTCGTGTTCCT-------------------------------------------CAGCTG----------------------------------------------CAAACAAAAAAA-------------------------------AACCAAAAACA-----------------AA-A
droMoj3 scaffold_6680:8140612-8140929 - ---------------------------------------GCGCATTTCGCTGCAGAACGCCGGTCGAAACAGACG-----CAAGCTGTGCGTCCAAATTGATAAATAATCAGCACGCTCCAGC----AG----TAGCAG---------------------A--GAGAGAGAGAGAG-AGAGAGA-CAGAGGTAGACAGAAGACAGAAGCAAAATAGAAACTGAAACATATTTT----------------AAA----ACAAGCTAC------TAA----CTAACGGCTGCTAACTCTTT-----G-------CT--------CTAAACAAAACTAATCGACGACTC-A----CCGCTAATTGCTT-TGTTGTTGTT--G--TTGTT-------------G--------TTGTTTCT--------TT------------------------------------------------CGGTTCG-----------------------------------------------------------TTCAGCTTTCGTTGCCAAAAAAGAAAAAGCAAGAACG-----GAAAAAAGCGTACA-A
droGri2 scaffold_15110:12069286-12069370 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TCGCTAATTGCTTTAATATACTTT--T--TGGTT----------------------TTGGTTC---------TTCT-------------------------------------------TC-AA-----C--------------------------AAAC-AAAAC--AAACAGCCAAAAATA-------------------------------CAACAAAAAAG-----------------AA-A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
A-----------TGCCCACATCCACATCGAGCTCCGATGGCGCATTCCGTTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAGTAACCT-------CCAAC----GG----CATTGT---------------------A--AATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTAC------CAA----CTAGCCGCTTGC---CGTTC-----AGCA-TT------------------------------------------CGTTAATAGCTT-TGTTTTCATT--C--TGGTT----------------------------TTGTGCAGGTTTCT-------------------------------------------GTGCAG-------------------------------AACCC-AAAA--ACACAGTCAAAACCA-------------------------------TTCCGAAGCCG-----------------AA-ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................GT---------------------A--AATTGGGAGTGGG-AAATCGG-C...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................................TTTCATT--C--TGGTT----------------------------TTGTGCA.................................................................................................................................................................................2011.00100000000000100000
.........................................GCATTCCGTTGCAGACCGCCGGCCGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000000000
........................................................................TCG-----A----------------TTCATTAGTAACCT-------CC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
.......................................................................GTCG-----A----------------TTCATTAGTAACCT-------CCAAC----GG----................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
....................................................................GCAGTCG-----A----------------TTCATTAGTAACCT-------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
..............................................................................................................T-------CCAAC----GG----CATTGT---------------------A--AAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..................................................................AGGCAGTCG-----A----------------TTCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000000001000000
.......................ACATCGAGCTCCGATGGCGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.....................................................................................................................................CATTGT---------------------A--AATTGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000010000000000
droSec2
A-----------TGCCCACATCCACATCGAGCTCCGATGGCGCATTCCGTTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTAATCAGTAACCT-------CCAAC----GG----CATTGT---------------------A--AATTGGGAGTGGG-AAATCTG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTAC------CAA----CTAGCCGCTTGC---CGTTC-----AGCA-TT------------------------------------------CGTTAATAGCTT-TGTTTTCATT--C--TGGTT----------------------------TTGTGCAGGTTTCT-------------------------------------------GTGCAG-------------------------------AACCC-AAAA--ACACAGTCAAAACTA-------------------------------TTCCTAAGCCG-----------------AA-ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................ATCAGTAACCT-------CCAAC----GG----CATTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
..................................................................AGGCAGTCG-----A----------------TTAATCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.......................................................ACCGCCGGCCGAGGCAGTCG-----A----------------TTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001
......................................................................................................................................ATTGT---------------------A--AATTGGGAGTGGG-AAAT................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
....................................................................GCAGTCG-----A----------------TTAATCAGTAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
dm3
A-----------TGCCCACATCCACATCGAGCTCCGATGGCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTAAATAGTAACCT------CCAAAC----GG----CATTGT---------------------A--AATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTAC------CAA----CTAGCCGCTTGC---TGTTC-----AGAA-TC------------------------------------------CGTTAATAGCTT-TGTTTTCATT--C--TGGTT----------------------------TTGTGCAGGTTTCT-------------------------------------------GTGCAG-------------------------------AACCC-AAAAACACACAGTCAAAACCA-------------------------------TTCCGAAGTCG-----------------AA-ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................AGGCAGTCG-----A----------------TTAAATAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000001000
....................................................................GCAGTCG-----A----------------TTAAATAGTAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TT----------------------------TTGTGCAGGTTTCT-------------------------------------------GTGCAG-------------------------------A.........................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GCCGAGGCAGTCG-----A----------------TTAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................CATTGT---------------------A--AATTGGGAGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000
........................................................................................................................AAC----GG----CATTGT---------------------A--AATTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................AATTGGGAGTGGG-AAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GCATTCCGCTGCAGACCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TAATAGCTT-TGTTTTCATT--C--.........................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................ACCGCCGGCCGAGGCAGTCG-----A----------------TTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000
.......................................................ACCGCCGGCCGAGGCAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................C------CAA----CTAGCCGCTTGC---TGTTC-----......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................ATTGT---------------------A--AATTGGGAGTGGG-A...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................................................ACCGCCGGCCGAGGCAGTCG-----A----------------TTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................AGTAACCT------CCAAAC----GG----CAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................ACCT------CCAAAC----GG----CATTGT---------------------A--AATTGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................GTCG-----A----------------TTAAATAGTAACCT------CCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TC-----AGAA-TC------------------------------------------CGTTAATAGCTT-TGTTT...................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................GCATTCCGCTGCAGACCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GGCCGAGGCAGTCG-----A----------------TTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
................CACATCCACATCGAGCTCCGATGGCGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................AC----GG----CATTGT---------------------A--AATTGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................ACCGCCGGCCGAGGCAGTCG-----A----------------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCAGGTTTCT-------------------------------------------GTGCAG-------------------------------A.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CT------CCAAAC----GG----CATTGT---------------------A--AATTGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.............................................................GGCCGAGGCAGTCG-----A----------------TTAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................ATTGGGAGTGGG-AAATCGG-C...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GGGAGTGGG-AAATCGG-CG..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................G----CATTGT---------------------A--AATTGGGAGTGGG-A...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................A----CTAGCCGCTTGC---TGTTC-----AGA...................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TT--C--TGGTT----------------------------TTGTGCAGGTTTCT-------------------------------------------GTGC...........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TTGGGAGTGGG-AAATCGG-C...........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TCCGATGGCGCATTCCGCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................ATAGTAACCT------CCAAAC----GG----................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GTAACCT------CCAAAC----GG----CATTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GCTAC------CAA----CTAGCCGCTTGC---TGTT............................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ATAGTAACCT------CCAAAC----GG----CAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................ATT--C--TGGTT----------------------------TTGTGCAGGTTTC...........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AACCT------CCAAAC----GG----CATTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GAGGCAGTCG-----A----------------TTAAATAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................................................GCCGAGGCAGTCG-----A----------------TTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.........................................GCATTCCGCTGCAGACCGCCGGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CTGCAGACCGCCGGCCGAGGCAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
................................................................................................................................G----CATTGT---------------------A--AATTGGGAGTGGG-AAAT................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................TGCAGACCGCCGGCCGAGGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CCGGCCGAGGCAGTCG-----A----------------TTAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................GACCGCCGGCCGAGGCAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GCATTCCGCTGCAGACCGCCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AGCTAC------CAA----CTAGCCGCTTGC---................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TTC-----AGAA-TC------------------------------------------CGTTAATAGCTT-TGTTT...................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TGGG-AAATCGG-CGA---------------ATC-----------------------G-C.............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GCATTCCGCTGCAGACCGCCGGCCGAGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GTTTTCATT--C--TGGTT----------------------------TTGT....................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................ATTCCGCTGCAGACCGCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
.........................................................................CG-----A----------------TTAAATAGTAACCT------CCAAAC----GG----CA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CGAGGCAGTCG-----A----------------TTAAATAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TTC-----AGAA-TC------------------------------------------CGTTAATAGCTT-TGTT....................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................TGTTC-----AGAA-TC------------------------------------------CGTTAATAGCT..........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AACCT------CCAAAC----GG----CATTGT---------------------A--..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................AGCCGCTTGC---TGTTC-----AGAG-.................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TAAATAGTAACCT------CCAAAC----GG----CAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TGGGAGTGGG-AAATCGG-C...........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................CTTGC---TGTTC-----AGAA-TC------------------------------------------CGTT.................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TC-----AGAA-TC------------------------------------------CGTTAATAGCTT-TGTT....................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................ATTCCGCTGCAGACCGCCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................GCCGAGGCAGTCG-----A----------------TTAAATAGTAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
droEre2
G-----------TGCCCACATCCACACCGAGCTCCGATGGCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAGTGATCT-------CCAAC----GGCGGGCATTGT---------------------A--AATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTGCCGC---CAA----CTAGCCGCTTGC---TGTTC-----AGAA-TC------------------------------------------CGTTAATAGCTT-TGTTTTCATT--C--TGGTT----------------------------TTGTGCAGGTTTCT-------------------------------------------GTGCAG-------------------------------AACC-AAAAC--ACACAGTTAAAACCA-------------------------------TTCCGAAGCCG-----------------AA-ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................GCCGAGGCAGTCG-----A----------------TTCATTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
...........................................................................................................ATCT-------CCAAC----GGCGGGCATTGT---------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
....................................................................................................................................GCATTGT---------------------A--AATTGGGAGTGGG-AAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
....................................................................................................................................GCATTGT---------------------A--AATTGGGAGTGGG-A...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTAAAACCA-------------------------------TTCCGAAGCC......................2111.0010100000
...................................................GCAGACCGCCGGCCGAGGCAGTCT-----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
..................................................................AGGCAGTCG-----A----------------TTCATTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
..................................................................AGGCAGTCG-----A----------------TTCATTAGTGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
....................................................................................................ATTAGTGATCT-------CCAAC----GGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
......................................................................................................TAGTGATCT-------CCAAC----GGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.........................................GCATTCCGCTGCAGACCGCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
................................................GCTGCAGACCGCCGGCCGAGGCAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
..................................................................AGGCAGTCG-----A----------------TTCATTAGTGATCT-------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
...................................................GCAGACCGCCGGCCGAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
droYak3
G-----------TGCCCACATCCACATCGAGCTCCGATGGCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAGTAATCC-------ACTAC----GG----CATTGT---------------------G--AATCGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTAC------CAA----CTAGCCGCTTAC---TGTTC-----AGAA-TC------------------------------------------CGTTAATAGCTT-TGTTTTCATT--C--TGGTT----------------------------TTGTGCAGGTTTCT-------------------------------------------GTGCAG-------------------------------AACC-AAA----ACACAGTCAAAACCA-------------------------------TTCCGAAGCCG-----------------AA-ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................ATTCCGCTGCAGACCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50110000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCAAAACCA-------------------------------TTCCGAAGCC......................2120.50100000100000
.................................................CTGCAGACCGCCGGCCGAGGCAGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50101000000000
.............................................................GGCCGAGGCAGTCG-----A----------------TTCATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100000010000
...............................................................................................................................................................................................................................................................................................................................................................................TTTTCATT--C--TGGTT----------------------------TTGTGCA.................................................................................................................................................................................2120.50101000000000
droEug1
AA--TC----------------C---TCAATCCCCAATGGCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCGATTC----------------AATTCATTAATAATCT-------CTAAA----GA----------------------------------TATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTAC------CAA----CTAGACGCTAAC---TGTTC-----AGAA-TCCC---------ATAAC-----------CGAATCGCGT----CCGCTAATTGCTT-TGTTTTCATT--C--TGGTT----------------------------T---------TTCT-------------------------------------------GTGCAGTCCAA-ACCGAAA------------ACTGAAAACC-AAAAA--CCAAAGTTAAAACCA-------------------------------TTCCGAAGCCG-----------------AA-ASizeHit CountTotal NormTotal
No Reads
droBia1
AA--TCCCCGAGAGCCCACAGC-----------------GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAATAACCT-------CCA-C----GG----------------------------------AATTGGGAGTGGG-AAATCCG-CGA---------------GTC---------------------CGG-CCAA------------AACAA----ACAAGCTAC------CAA----CTAGCCGCTAAC---TGTTT-----GGAAGTCC----------CGAGC-----------CAAATCGCGT----CCGCTAATTGCTT-TGTTTTCATT--C--TGGTT----------------------------T---------TACT-------------------------------------------GTGCAGTCCGAGGGCAA-------------GCCT---------GAAA--CCAGAGTCAAAACCG-------------------------------TTCCGAAGCCG-----------------AA-ASizeHit CountTotal NormTotal
No Reads
droTak1
A-----------T--------------------------GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG--TCGA----------------TTCATTAATAATCT-------CCAAC----GG----AATCGG-------------------GGG--AATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTAC------CAA----CTAGCCGCTAAC---TGTTC-----AGAA-TCC----------CCAGT-----------CGAATCGCGT----CCGCTAATTGCTT-TGTTTTCATT--C--TGGTT----------------------------T---------TTCT-------------------------------------------GTGCAGTCCA----------------------------------AAA--CCAAACTCTAAACCA-------------------------------TTCCGAAGCCG-----------------AA-ASizeHit CountTotal NormTotal
No Reads
droEle1
---------------------------------------GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAATAATCT------TCCAAC----GG----CATTGG------------------AATTAAAATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTCC------CAA----CTAGCCGCTAAC---TGTTT-----AGAA-TC---------------------------CGAGCCGCGT----CCGCTAATTGCTT-TGTTTTCATT--C--TGGTT----------------------------T---------TTCT-------------------------------------------GTGCAGTCCAAAACCAAAAACCGAAAACAAACTTA--AAACC-AAAC--TCAAAACCCAAACCA-------------------------------TTACGAAGCCG-----------------AA-ASizeHit CountTotal NormTotal
No Reads
droRho1
GA--TCC---------C------------------AAT-GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAATAATCT-------CCAAC----GG----------------------------------AATCGAGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA----------AAAATAA----ACAAGCTCC------CAA----CTAGCCGCTAAC---TGTTC-----AGAA-TC---------------------------CGCATCGCGT----CCGCTAATTGCTT-TGTTTTCATT--C--TGGTT----------------------------T----------TCT-------------------------------------------GTGCAGTCCAAAACCGA-------------ACT-------C-AAA--------ACTGAAAACCA-------------------------------TTCCGAAGCCG-----------------AATASizeHit CountTotal NormTotal
No Reads
droFic1
GA--TCC---------C------------------AAT-GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----G----------------TTCATTAATAATCT-------CTAAC----AG----AATTGT---------------------G--GATTGGGAGTGGG-AAATCGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCCAC------CAACCAACTAGCCGCTAAC---TGTTC-----AGAA-TC---------------------------CGAGTCGCGT----TCGCTAATTGCTT-TGTTTTCATT--C--TGGTT----------------------------T---------TTCT-------------------------------------------GTGCAGTCCGTAACCGA-------------AACTG--AAACC-AAAA--CCAAAGTCAAAACCA-------------------------------TTCCGAAGCCG-----------------AA-ASizeHit CountTotal NormTotal
No Reads
droKik1
CGCGTCC---------C------------------CAT-GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCGTT-----CTCCG----TC-ATCTCCATCAATAATCG-------CCGAG----AG----AACTGA-------------------CAG--AATTGGGAGTGGG-AAAACGG-CGA---------------ATC-----------------------G-CCAA------------AATAA----ACAAGCTTC------CAA----CTAGCCGCTAAC---TGTGC-----GGAA-TCCCC-----------------------------CG-GTCCCCCTGCTAATTGCTT-TGTTTTCATT--C--TGGTT---------------------------------------TCT-------------------------------------------GTGCAGTCCAAAA-------------------CT---------CAAA--CCAAAGTCAAAACCATTCCGTTCCGACTCCGA--------------TTCCAAAGCCG-----------------AA-ASizeHit CountTotal NormTotal
No Reads
droAna3
--------------------------------TGCGA-GGCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCGCTTC----------------CCTTCATTAACAAT---------CCAAC----GG----CAC---------------------------AACTGGGAGTGGG-AAATC-----------------------------------------------G-CCAAAAATAACGAAAAAATAAACAAACAAGCTCC-----CCAA----CTAGCCGCTAAC---AGTTG-----AGAA-TCTCC--------CCAAA-----------CGAAACGAG------CGCTAATTGCTT-TGTTTTCATT--C--TGGTT---------------------------------------TCT-------------------------------------------GTGCAGTTCCA--------------------------------AAAG--CCAAAGCCAGAGTCA-------------------------------TTCCGAAGCCGAAACCG-----------AA-ASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................ACTGGGAGTGGG-AAATC-----------------------------------------------G-..............................................................................................................................................................................................................................................................................................................................................................................1812.002000002
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------AAAG--CCAAAGCCAGAGTCA-------------------------------TTCC............................2411.001010000
...........................................................................................................................................................................................................................................................................................CGCTAAC---AGTTG-----AGAA-TCT..............................................................................................................................................................................................................................................................................................1911.001010000
................................................................................................................................G----CAC---------------------------AACTGGGAGTGGG-AAATC-----------------------------------------------G-CC............................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.......................................................ACCGCCGGCCGAGGCAGTCGCTTC----------------CC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
droBip1
--------------------------------TGCGAT-GCGCATTCCGCTGCAGACCGCCGGCCGAGGCAGTCG-----A----------------TTCATTAACA---------------------------------------------------------ACTGGGAGTGGG-AAAT------------------------A-----------------------A-CCAAAAATAAA-AAAAAATAAACAAACAAGCTCC------AAA----CTAGCCGCTAAC---AGTTC-----AGAA-TCCAT--------CCAAA-----------CGAAACGAG------CGCTAATTGCTT-TGTTTTCATT--C--TGGTT---------------------------------------TCT-------------------------------------------GTGCAGTTCGA--------------------------------AAAG--CCAAAGCCAGAGTCA-------------------------------TTCCGAAGCCG-----------------AA-ASizeHit CountTotal NormTotal
No Reads
dp5
---------------------------------------GCGCATTCCACTGCAGAACGCCGGCCGTGCCAGACC-----ATAGCGG---GTCTCTCTTGATTAATAATCA-------CTAACAAACAATCGC----TCGGGAAGGGAAGGGAATGGAACG--GAATGGTAGTGGGTAAAACGGTCGA-------------ACATC-----------------------G-CCCA------------AATAG----ACAAGCATCCATCCGAAA----CTACCCGCTAAC---TCTTTTTTTGGGAA-CCCACATATTCTCA--TAAGAATCGAACGCGAGACGCGC----TTGCTAATTGCCT-TGTTTTCTGTTTCCCTGGTCTGTGGTGTTTGGTGTTCGGTGTTTGGTG-----CCG----CCTCGACTCGACTCTCCGTTTCCTGTTGGCGTGTTCGTGTTCCCAGTGCAGTTCGCAGA--------------------------C-AAAA----------CAAACAAA-------------------------------TTGCAAAGCCA-----------------AA-ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................ATCGC----TCGGGAAGGGAAGGGAATGGAACG--..................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCAGTGCAGTTCGCAGA--------------------------C-.....................................................................................2211.0010010000000
...............................................................................................................................AATCGC----TCGGGAAGGGAAGGGAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
............................................................................................................................................................................................................TC-----------------------G-CCCA------------AATAG----ACAAGCATCCATC........................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................................................AACGCCGGCCGTGCCAGACC-----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
droPer2
---------------------------------------GCGCATTCCACTGCAGAACGCCGGCCGTGCCAGACC-----ATAGCGG---GTCTCTCTTGATTAATAATCA-------CTAACAAACAATCGC----TCGGGAAGG-----GAATGGAATG--GAATGGTAGTGGGTAAAACGGTCGA-------------ACATC-----------------------G-CCCA------------AATAG----ACAAGCATCCATCCGAAA----CTACCCGCTAAC---TCTTTTTTTGGGAA-CCCACATATTCTCA--TAAGAATCGAACGCGAGACGCGC----TTGCTAATTGCCT-TGTTTTCTGTTTCCCTGGTCTGTGGTGTTTGGTGTTCTGTGTTTGGTG-----CCG----CCTCGACTCGACTCTCCGTTTCCTGTTGGCGTGTTCGTGTTCCCAGTGCAGTTCGCAGA--------------------------C-AAAA----------CAAACAAA-------------------------------TTGCAAAGCCA-----------------AA-ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................CATTCCACTGCAGAACGCCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................................................................................................................................CGGGAAGG-----GAATGGAATG--..................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
droWil2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA------------AATAA----ATAAACTAA------CAA----TTAGACGCAAAC---TCATT-----TGTA---------------------------------------A----TTGTCCATTTCTT-CGCTTTCATT--T--T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
------------------------------------------CATTCCGCTGCAGAACGCCAGCCGAGACAGTCG-----C----------------------------------------------------------------------------------AGCTGAGCGTGTC---TT-----AA---------------GCA---------------------CAG-CTA----------------AA----ACAAGCTAC------TAA----CTT-TTGCTAAC---TGTCT----GCGAA-GCCAA--------AAAAA-----------AAAAACG-------AAGCTAATTGCTT-TCTTATTATT--CATTGGTT----------------------------CTGTTCGTGTTCCT-------------------------------------------CAGCTG----------------------------------------------CAAACAAAAAAA-------------------------------AACCAAAAACA-----------------AA-ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................GCCGAGACAGTCG-----C----------------------------------------------------------------------------------AGCTGAGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000010000000000000000000000000000000000000000000000000000
.................................................................GAGACAGTCG-----C----------------------------------------------------------------------------------AGCTGAGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000010000000000000000000000000000000000000000000000000000
......................................................................AGTCG-----C----------------------------------------------------------------------------------AGCTGAGCGTGTC---TT-----...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
.................................................CTGCAGAACGCCAGCCGAGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TTATT--CATTGGTT----------------------------CTGTTCGTG...............................................................................................................................................................................2211.001000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................AGCTGAGCGTGTC---TT-----AA---------------G.........................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000100000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................CTT-TCTTATTATT--CATTGGT.....................................................................................................................................................................................................................2011.001000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................GTC---TT-----AA---------------GCA---------------------CAG-CTA----------------AA----AC...................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................C---TT-----AA---------------GCA---------------------CAG-CTA----------------AA----ACA..................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000001000000000000000000000000000000000000000000
droMoj3
---------------------------------------GCGCATTTCGCTGCAGAACGCCGGTCGAAACAGACG-----CAAGCTGTGCGTCCAAATTGATAAATAATCAGCACGCTCCAGC----AG----TAGCAG---------------------A--GAGAGAGAGAGAG-AGAGAGA-CAGAGGTAGACAGAAGACAGAAGCAAAATAGAAACTGAAACATATTTT----------------AAA----ACAAGCTAC------TAA----CTAACGGCTGCTAACTCTTT-----G-------CT--------CTAAACAAAACTAATCGACGACTC-A----CCGCTAATTGCTT-TGTTGTTGTT--G--TTGTT-------------G--------TTGTTTCT--------TT------------------------------------------------CGGTTCG-----------------------------------------------------------TTCAGCTTTCGTTGCCAAAAAAGAAAAAGCAAGAACG-----GAAAAAAGCGTACA-ASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................ATCAGCACGCTCCAGC----AG----TAGCAG---------------------A--GA................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.........................................................................CG-----CAAGCTGTGCGTCCAAATTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......................................................................................................................................................................................GA-CAGAGGTAGACAGAAGACAGAAGCA...................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
......................................................GAACGCCGGTCGAAACAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
................................................................................................................................................................................................................................................................................AA----CTAACGGCTGCTAACTCT.............................................................................................................................................................................................................................................................................................................2011.001100000
droGri2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TCGCTAATTGCTTTAATATACTTT--T--TGGTT----------------------TTGGTTC---------TTCT-------------------------------------------TC-AA-----C--------------------------AAAC-AAAAC--AAACAGCCAAAAATA-------------------------------CAACAAAAAAG-----------------AA-ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 08:55 AM