ID:

dsi_17414

 Coordinate:

3l:3013729-3013878 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.2 -10.0 -9.9

Flybase annnotation

exon [3l_3013879_3013969_+]; CDS [3l_3013879_3013969_+]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TACTAACTCTGTTTCCTACAATTGCAAAGTACCAATAACTACGCTAGTTATGTGTGTGTTAAATATATATATAAATTATTTAAATCAGCGTAAGTGCATAAAGAACCGATTGTATTATAAGTTGCATGTACCATACCAAGTAATGCGCGCCCCAAACGAATCGAATATCGCGATGGAACGAACATTCTAGACTGTAGTCGATGTGCAAGAAACGAATAAACTTTCAAAACTACAACATACTCCACCTGCT
**************************************************************************************************........(((((........)))))..............((.((((..((..(((..(((........)))...)))..))..))))))..........**************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 M023
head
 M024
male body		 M025
embryo
 M053
female body
 O002
Head
 GSM343915
embryo
.............................................................................................................................................................................TGGAACGAACATTCTAGACTGTAGT.................................................... 25 0 1 14.00 14 4 1 5 4 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TCGCGATGGAACGAACATTCTAGACTG........................................................ 27 0 1 3.00 3 0 2 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TAGACTGTAGTCGATGTGCAAGAAACGAA.................................. 29 0 1 3.00 3 0 0 0 0 0 3 0 0 0 0 0 0 0
.............................................................................................................................................................................TGGAACGAACATTCTAGACTGTAGTCGATG............................................... 30 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
TACTAACTCTGTTTCCTACAATTGCA................................................................................................................................................................................................................................ 26 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................TAAAGAACCGATTGTATTATAAGT................................................................................................................................ 24 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0
......CTCTGTGTCCTACACTT................................................................................................................................................................................................................................... 17 2 15 1.33 20 0 20 0 0 0 0 0 0 0 0 0 0 0
.....ACTCTGTGTCCTACACTT................................................................................................................................................................................................................................... 18 2 5 1.20 6 0 6 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGTAGTCGATGTGCAAGAAACGAATA................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GATGGAACGAACATTCTAGACTGT....................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TAGACTGTAGTCGATGTGCAAGAAAC..................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TAGTCGATGTGCAAGAAACGA................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TATCGCGATGGAACGAACATTCTAGAC.......................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................TGGAACGAACATTCTAGACTGTAGTCGA................................................. 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................ATCAGCGTAAGTGCATAAAGAACCGA............................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CGCGATGGAACGAACATTCTAGACTG........................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TAGTCGATGTGCAAGAAACGAATAAAC............................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TGGAACGAACATTCTAGACTGTAGTCG.................................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................ATATCGCGATGGAACGA..................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AACCGATTGTATTATAAGTTGCATG.......................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GAACATTCTAGACTGTAGTCGAT................................................ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................ATTCTAGACTGTAGTCGATGTGCAA.......................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CATTCTAGACTGTAGTCGA................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................ACTGTAGTCGATGTGCAAGAAACGAA.................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......CTCTGTTTCCTACACTT................................................................................................................................................................................................................................... 17 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TGCGCGCCCCAAACGAATCGAATA................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TCTAGACTGTCGTCGATGTGG............................................ 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................................TAGACTGTAGTCGATGTGCAAGAAACGAAT................................. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TTCTAGACTGTAGTCGATGTGCAAGAAT...................................... 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ATAAACTTTCAAAACTACAACAT............ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................TAGTCGATGTGCAAGAAACGAATAAACT............................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TAAATTATTTAAAACAGCGTAAGTGCA........................................................................................................................................................ 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................CGCGATGGAACGAACATTCTAGACT......................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
....AACTCTGTGTCCTACACTT................................................................................................................................................................................................................................... 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................AGACTGTAGTCGATGTGCAAGAAACGAA.................................. 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................GATGGAACGAACATTCTAGACTGTA...................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................TCTAGACTGTAGTCGATGTG............................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TTCTAGACTGTAGTCGATGTGCAAGA........................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................ACCAAGTAATGCGCGCCCCAAACGAATCGA...................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TATCGCGATGGAACGAACATTCTAGACTG........................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................ATCGCGATGGAACGAACATTCTAGACTGT....................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TTCTAGCCTGTAGTC................................................... 15 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................TGAATGTAGTCGATGGGCAA.......................................... 20 3 8 0.25 2 0 0 0 0 0 2 0 0 0 0 0 0 0
.....ACTCTGTGTCCTACA...................................................................................................................................................................................................................................... 15 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................TATGTGGCTGTTTAATATATATA................................................................................................................................................................................... 23 3 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................GAACCGATCGTTTTATACG................................................................................................................................. 19 3 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................TTGCATGCACCATTCCA................................................................................................................ 17 2 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.......TCTGTGTCCTACACTT................................................................................................................................................................................................................................... 16 2 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TTCAAGCCTGTAGTCG.................................................. 16 2 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0
.................................................................................................................................................................................................GTAGTCGATGTGAAACA........................................ 17 2 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....ACTCTGTGTCCTACACT.................................................................................................................................................................................................................................... 17 2 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GTATTGTAAGTTGCA............................................................................................................................ 15 1 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................AGTTATGTGTGTTTTA............................................................................................................................................................................................. 16 1 19 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................ACCGATTGAATTATA................................................................................................................................... 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................GATTGTATTATCAGAAGCA............................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................AATAGATATATAAATT............................................................................................................................................................................. 16 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..CTAACTCTGTGTCCTCCT...................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

ATGATTGAGACAAAGGATGTTAACGTTTCATGGTTATTGATGCGATCAATACACACACAATTTATATATATATTTAATAAATTTAGTCGCATTCACGTATTTCTTGGCTAACATAATATTCAACGTACATGGTATGGTTCATTACGCGCGGGGTTTGCTTAGCTTATAGCGCTACCTTGCTTGTAAGATCTGACATCAGCTACACGTTCTTTGCTTATTTGAAAGTTTTGATGTTGTATGAGGTGGACGA
****************************************************........(((((........)))))..............((.((((..((..(((..(((........)))...)))..))..))))))..........************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
 M023
head
 O002
Head
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
..................................................................................................................................................................................................................................TTTGATGTTGTATGAGGTGGA... 21 0 1 2.00 2 2 0 0 0 0 0 0 0
...................................................................................................TTTCTTGGCTAACATAATATTC................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0
...........................................................................................TTCACGTATTTCTGGGCTA............................................................................................................................................ 19 1 1 1.00 1 0 1 0 0 0 0 0 0
................................................................................ATTTAGTCGCATTCACGTA....................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................CATCAGGTACGCGTTCTAT...................................... 19 3 15 0.73 11 0 9 0 1 0 0 0 1
................................................................................................................................................CGCGCGGGCCTTGCTAAGCTT..................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0
.................................................................................................................................................GCGCGGGCTTTCCTAAGCTT..................................................................................... 20 3 6 0.33 2 0 0 2 0 0 0 0 0
.......................................................................................................................................................................................................................TATTCGAAAGTTTTAATATTGT............. 22 3 4 0.25 1 0 0 0 0 0 1 0 0
..........................................................................................................................................TCATTACGCGCGGGCTAT.............................................................................................. 18 2 4 0.25 1 0 0 0 1 0 0 0 0
.................................................................................................................................................GCGCGGGCCTTGCTAAGCT...................................................................................... 19 3 13 0.15 2 0 0 2 0 0 0 0 0
................................................................................................................................................CGCGCGGGCTTTCCTAAGCT...................................................................................... 20 3 7 0.14 1 0 0 1 0 0 0 0 0
................................................................................................................................................CGCGCGGGCCTTGCTAAGC....................................................................................... 19 3 7 0.14 1 0 0 1 0 0 0 0 0
.................................................................................................................................................GCGCGGGCTTTGCTAAGTTT..................................................................................... 20 3 13 0.08 1 0 0 1 0 0 0 0 0
..............GGTTGTTAACGTTTCCTG.......................................................................................................................................................................................................................... 18 2 13 0.08 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:3013679-3013928 + dsi_17414 TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT----GTGTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGCGCCCCAA-AC---GA-------ATCG----AATATC------------------------------GCGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACATA-CTCCAC-------CTGCT
droSec2 scaffold_2:3149146-3149388 + TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT----GTGTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGCGCCCCAA-AC---GA-------ATCG----AATATC------------------------------GCGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACATA-CTC--------------T
dm3 chr3L:3155521-3155770 + TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT----GTGTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGCGCCACAA-AC---GA-------ATCC----AATATC------------------------------GCGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACATA-CTCCAC-------CTGCT
droEre2 scaffold_4784:3164551-3164793 + TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGCGCCCCAA-AC---GA----------------ATATC------------------------------GCGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACATA-CTCCAC-------CTGCT
droYak3 3L:8786192-8786434 - TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGCGCCCCAA-AC---GA----------------ATATC------------------------------GCGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACATA-CTCCAC-------CTGCT
droEug1 scf7180000409466:879253-879496 + TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGCA-AGTGCATA--AA-TGAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGAGCCCCAA-AC---CA----------------ATATC------------------------------GAGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-CTCATC-------CTGTT
droBia1 scf7180000302428:2503287-2503530 + TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGCA-AGTGCATA--AT-TGAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGAGCCCCAA-AC---GA----------------ATATC------------------------------GAGACG-AAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-CTCCAC-------CTGTT
droTak1 scf7180000415378:247870-248106 - TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGCA-AGTGCATA--AA-TGAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGAGCCCCAA-AC---GA----------------ATATC------------------------------GAGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-TTTC--------------
droEle1 scf7180000491249:2132536-2132804 - TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGCA-AGTGCATA--AG-TGAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GTAATGCG-----------------------------------AATGCGAGCCCCAC-AC---GA----------------ATATCGAGATCGTGATCGTGATCGGGATCGAGATCGATATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-------------------
droRho1 scf7180000777063:103232-103475 - TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGCA-AGTGCATA--AA-TGAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGAACCCCAA-AC---GA----------------ATATC------------------------------GAGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-ATCAGA-------CTGCT
droFic1 scf7180000454105:1469358-1469630 + TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGCA-AGTGCATA--AA-AGAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGAGCCCCAA-AC---GA----------------ATATCGAGATCGAGATCGGGATCGAGACCGAAATCGAGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-CACAAG-------AT-CT
droKik1 scf7180000302577:1337653-1337933 + AACTAACTCTGTTTCCT--ACAATTGCAAAAA-GTACCAATAACTACG------CTAGAGTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AAAT-CAGCGCA-AGTGCATATAAA-CGAACCGATTGTAATATAAGTTG---------CATG-----------------TAAAATACCAACTAAAACCGTAATGCGT----------------------------------AATGCGAGCCCCAAGAC---GA----------------ATATCG---------------------------TCGAGATG-GAACGAACAT---------TCTAGACTGTAG-----TTCGATG--TGCAAACGAAACGAATAAACTTTCAAAACTACAACGTAACTCCACCACCACCCTGCT
droAna3 scaffold_13337:8960713-8960974 - TACTAACTCTGTTTCCT--AAAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGAG-AGTGCATA--AATCGAACCGATTGTATTATAAGTTG---------CATA-----------------AACCATACCAA--------GT-----------------------------------------AACGCGAGCCCCGA-AAATCGAAGAACAAAA--CAAGAGTATC------------------------------GCGAAG-GAACAAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAACCTAAAGCATA-CATCAT-------CTCCT
droBip1 scf7180000395984:10928-11177 - TACTAACTCTGTTTCCT--AAAATTGCAAAAC-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGAG-AGGGCATA--AAACGAACCGATTGTATTATAAGTTG---------CATA-----------------AACCATACCAA--------CT-----------------------------------------AACGCGATCCCCGA-AC---GATGA----AT-G----AATATC------------------------------GCGATG-GAACAAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAACCTAAAACATA-CACCAT-------C----
dp5 XR_group8:4020819-4021127 + TACTAACTCTGTTTCCTATACAATTGCAAAAA-GTACCAATAACTACGC-----CTA--GTTAT----CTGTGTGTTAAA---------------------------------------------------------TAG-----------------------------------------------TATATATATAATTATTTA----------------AAATCCAGCGCC-AGTGCATA--AG-CGAAACGATTGTATTATATGT-ACGTAAGCTGCATGTTGCATGCAATGCACCCTACCATACCAT--------GT-----------------------GTGTACCATACTACGCAAAACGC------AAA-AC---GA-------ATCGC---AAT--CG------------------------A-ATCGAGATG-GAACGAACATGAAACATTCTCTAGACTGTAG------TCGATGTGTGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-C--CAC-------CCGC-
droPer2 scaffold_29:252943-253251 + TACTAACTCTGTTTCCTATACAATTGCAAAAA-GTACCAATAACTACGC-----CTA--GTTAT----CTGTGTGTTAAA---------------------------------------------------------TAGT---------------------------------------------ATATATAT--AATTATTTA----------------AAATCCAGCGCC-AGTGCATA--AG-CGAAACGATTGTATTATATGT-ACGTAAGCTGCATGTTGCATGCAATGCACCATACCATACCAT--------GT-----------------------GTGTACCATACTACGCAAAACGC------AAA-AC---GA-------ATCGC---AAT--CG------------------------A-ATCGAGATG-GAACGAACATGAAACATTCTCTAGACTGTAG------TCGATGTGTGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-C--CAC-------CCGC-
droWil2 scf2_1100000004822:2991033-2991302 - AACTAACTCTGTTTCCT--ACAATTGCAAAAAGGTACCAATAACTATGACTATGGTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA--ATTAATTA----------------AA-A-TAACGCAAAGAGCATA--AA-TGAAACGATTGTATTATAAGTTG---------CATG-----------------TACGATGGATG-----ATGATGATGAGTAGTAGAAGAAGAAGAA------------------GATGCGATATC------------------------A------TG--------------------TA------CGAAGTGAAAACAAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAATGTA-ACCAAC-------C----
droVir3 scaffold_13049:7546752-7546999 + GACTAACTCTGTTTCCT--ACAATTGCAAA-A-GTACCAATAACTATG------GTA--GTTGTGTATGTGTGTGTTTAACATATATAGTTATA-------------------------------------------A-------------------------------------AAAATTAAAAAATATAT-TT-AATTATTTACATTTAATGTACTTTTAG-T-CAGCGGT-AGT----A--AA-TGAAACGACTGTAAAATAAGTTACGCAAA---TATG-----------------TACGATATATT--------GT-----------------------------------------AAC------------------------------------------------------------------------TAAC-GAACGAACCT---------TTTAGACTCTAGGC---TTCGATG--TGCAA--GAAACGAATAAAATTA----------------------------------
droMoj3 scaffold_6680:5799245-5799566 + GACTAACTCTGTTTCCT--ACAATTGCAAA-A-GTACCAATAACTATG------GTA--GTTGT----GTATGTGTTTAACATAT--AGTTATATGTATACATACAAATAAATATATGCATATATATTACTTATATAT-GTATATATATATTACTTATATATGCATATATATACATAA----ATAAATATAT-TT-AATTATTTACATTTAATGTACTTTTAG-T-CAGCGGT-AGTA------AA-TGAAACGACTGTAAAATAAGTTACGAAAT---TATG-----------------TACGATATAAT--------GT-----------------------------------------AACT------------------------------------------------------------------------AAC-AAACGAACCT---------TTTAGACTTTAGGC---TTCGATG--TGCAA--GAAACGAATAAAATTA--------AAACA---------------------
droGri2 scaffold_15110:5332738-5332970 - GACTAACTCTGTTTCCT--ACAATTGC---------------------------------------------GTGTTTAACATATACAGTTATA-------------------------------------------T------------------------------------------------ATATATTT--AATTATTTACAATTACTGTACTATTAG-T-CATCGGT-AGTAAATAAAAA-AGAAACGACTGTAAAATAAGTTACGGAAAATTTATG-----------------TACGATATAAT--------GT-----------------------------------------AACT---------A--------------------------------------------------------------ACG-AAACGAACCT---------TTTAGATTTTAGGCTTCTTCAATG--TGCAA--GAAACGAATAAAATTTAAAAAAAAAAACTTG-T--CA-------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT----GTGTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGCGCCCCAA-AC---GA-------ATCG----AATATC------------------------------GCGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACATA-CTCCAC-------CTGCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GAACGAACAT---------TCTAGACTGTAG------T................................................................25114.001400000041405000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TC------------------------------GCGATG-GAACGAACAT---------TCTAGACTG..........................................................................2713.00300000002100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTGTAG------TCGATG--TGCAA--GAAACGAA..........................................2913.00300000000000003000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--.........................................................3012.00200000011000000000
TACTAACTCTGTTTCCT--ACAATTGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000010010000000
................................................................................................................................................................................................................................................TA--AA--GAACCGATTGTATTATAAGT....................................................................................................................................................................................................................................................................................2412.00200000010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAG------TCGATG--TGCAA--GAAACGAATA........................................2611.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG-GAACGAACAT---------TCTAGACTGT.........................................................................2411.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTGTAG------TCGATG--TGCAA--GAAAC.............................................2611.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG------TCGATG--TGCAA--GAAACGA...........................................2111.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TATC------------------------------GCGATG-GAACGAACAT---------TCTAGAC............................................................................2711.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GAACGAACAT---------TCTAGACTGTAG------TCGA.............................................................2811.00100000000000010000
..............................................................................................................................................................................................................................A-T-CAGCGTA-AGTGCATA--AA--GAACCGA.................................................................................................................................................................................................................................................................................................2611.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------GCGATG-GAACGAACAT---------TCTAGACTG..........................................................................2611.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG------TCGATG--TGCAA--GAAACGAATAAAC.....................................2711.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GAACGAACAT---------TCTAGACTGTAG------TCG..............................................................2711.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................ATATC------------------------------GCGATG-GAACGA................................................................................................1711.00100000010000000000
.........................................................................................................................................................................................................................................................AACCGATTGTATTATAAGTTG---------CATG-----------------....................................................................................................................................................................................................................................................2511.00100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAT---------TCTAGACTGTAG------TCGAT............................................................2311.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------TCTAGACTGTAG------TCGATG--TGCAA--..................................................2511.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT---------TCTAGACTGTAG------TCGA.............................................................1911.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTAG------TCGATG--TGCAA--GAAACGAA..........................................2611.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................TGCGCGCCCCAA-AC---GA-------ATCG----AATA.............................................................................................................................................2411.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTGTAG------TCGATG--TGCAA--GAAACGAAT.........................................3011.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------TCTAGACTGTAG------TCGATG--TGCAA--GAAT..............................................2811.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAACTTTCAAAACTACAACAT....................2311.00100000100000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG------TCGATG--TGCAA--GAAACGAATAAACT....................................2811.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------GCGATG-GAACGAACAT---------TCTAGACT...........................................................................2511.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTGTAG------TCGATG--TGCAA--GAAACGAA..........................................2811.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG-GAACGAACAT---------TCTAGACTGTA........................................................................2511.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGACTGTAG------TCGATG--TG.......................................................2011.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------TCTAGACTGTAG------TCGATG--TGCAA--GA................................................2611.00100000001000000000
..................................................................................................................................................................................................................................................................................................................ACCAA--------GT-----------------------------------------AATGCGCGCCCCAA-AC---GA-------ATCG----A................................................................................................................................................3011.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TATC------------------------------GCGATG-GAACGAACAT---------TCTAGACTG..........................................................................2911.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATC------------------------------GCGATG-GAACGAACAT---------TCTAGACTGT.........................................................................2911.00100000010000000000
droSec2
TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT----GTGTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGCGCCCCAA-AC---GA-------ATCG----AATATC------------------------------GCGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACATA-CTC--------------TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................A-AC---GA-------ATCG----AATATC------------------------------GCGATG-GAAC..................................................................................................2511.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................CG----AATATC------------------------------GCGATG-GAAC..................................................................................................1811.0010010
dm3
TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT----GTGTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGCGCCACAA-AC---GA-------ATCC----AATATC------------------------------GCGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACATA-CTCCAC-------CTGCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG------TCGATG--TGCAA--GAAACGAATAAACT....................................28129.002900000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001000012000000000000000000000000000000000000000000000000001000001000000000101001000000000000000000000000000000000000000000000000000000000000000000001000000001000000100000000000001500010
........................................................................................................................................................................................................................................................................................................................................................................................................TCC----AATATC------------------------------GCGATG-GAACGAACAT---------TC.................................................................................27120.00200000000000000000000000000000000000000000010000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000200100000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000100010000100000000000000000000700000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG------TCGATG--TGCAA--GAAACGAATAAAC.....................................27110.00100000000000000000000000000000000000000000000000000000000000000000000000000000011100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAACAT---------TCTAGACTGTAG------T................................................................2319.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003030300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTGTAG------TCGATG--TGCAA--GAAACGAA..........................................2919.0090000000000000000000000000000000000000000000000000000000000000000000000000000017100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTGTAG------TCGATG--TGCAA--GAAAC.............................................2619.0090000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000001020000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------GCGATG-GAACGAACAT---------TCTAGACTG..........................................................................2618.0080000000000000000000000000000000000000000000000000100000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000020000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................TC------------------------------GCGATG-GAACGAACAT---------TCTAGACTG..........................................................................2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000200000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAT---------TCTAGACTGTAG------T................................................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003010400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTGTAG------TCGATG--TGCAA--GAAACG............................................2717.0070000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000100000000000000000000000000000000000000000000000000000000000000000000000010001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAG------TCGATG--TGCAA--GAAACGAATA........................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000400000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAT---------TCTAGACTGTAG------TCGATG--T........................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TATC------------------------------GCGATG-GAACGAACAT---------TCTAGAC............................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000031010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGACTGTAG------TCGATG--TGCAA--GAAAC.............................................2816.0060000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAACAT---------TCTAGACTGTAG------T................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................ACCGATTGTATTATAAGT....................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TATTATAAGTTG---------CATG-----------------TACCATACCAA--------G................................................................................................................................................................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------TCTAGACTGTAG------TCGATG--TGCAA--GA................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................TATC------------------------------GCGATG-GAACGAACAT---------TCTAGACTG..........................................................................2915.0050000000000000000000000000000000000000000000000000000000000000000000000000000011210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAACAT---------TCTAGACTGTAG------T................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAG------TCGATG--TGCAA--GAAACGAA..........................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAT---------TCTAGACTGTAG------TCGATG--T........................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TCC----AATATC------------------------------GCGATG-GAACGAACA.............................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------TCTAGACTGTAG------TCGATG--TGCAA--GAAAC.............................................2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000030010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG-GAACGAACAT---------TCTAGACTGTAG------T................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GAACGAACAT---------TCTAGACTGTAG------T................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................T--ACAATTGCAA--A-GTACCAATAACTACG------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG-GAACGAACAT---------TCTAGACTGTAG------T................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTTTCAAAACTACAACATA-..................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTCCT--ACAATTGCAA--A-GTACCAATAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACC...................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000
.......................................................................................................................................................................................................................................TA-AGTGCATA--AA--GAACCGATTGTA............................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------TCGATG--TGCAA--GAAACGAATAAACT....................................2713.0030000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................TTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------......................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000
..............................................................................................................................................................................................................................................CATA--AA--GAACCGATTGTATTATAAGT....................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------GCGATG-GAACGAACAT---------TCTAGACT...........................................................................2513.0030000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TATC------------------------------GCGATG-GAACGAACAT---------TCTAGACT...........................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGCATA--AA--GAACCGATTGTATTATAA......................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TATA-AATTATTTA----------------AA-T-CAGCGTA-AGT...................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CACAA-AC---GA-------ATCC----AATATC------------------------------GCGATG-GAAC..................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AACTCTGTTTCCT--ACAATTGCAA--A-G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................ATTATAAGTTG---------CATG-----------------TACCATACCAA--------G................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACCG..................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................TTATTTA----------------AA-T-CAGCGTA-AGTGCATA--............................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTGTAG------TCGATG--TGCAA--G.................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
TACTAACTCTGTTTCCT--ACAATTGCAA--A-G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................AGTGCATA--AA--GAACCGATTGTAT...........................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCAAAACTACAACAT....................1812.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTGTAG------TCGATG--TGCAA--GAAACGA...........................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGACTGTAG------TCGATG--TGCAA--GAAACG............................................2812.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TA--AA--GAACCGATTGTATTATAAGTT...................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT---------TCTAGACTGTAG------TCGATG--TGCAA--GA................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TA--AA--GAACCGATTGTATTATAAGT....................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTGTAG------TCGATG--TGCAA--GAAACGAAT.........................................3012.0020000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TATTTA----------------AA-T-CAGCGTA-AGTGCATA--AA--GA......................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CAGCGTA-AGTGCATA--AA--GAACCGA.................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG-GAACGAACAT---------TCTAGACTGTAG------TC...............................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................T-CAGCGTA-AGTGCATA--AA--GAACCGATTG..............................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................TATC------------------------------GCGATG-GAACGAACAT---------TCTAGA.............................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATG-GAACGAACAT---------TCTAGACTG..........................................................................2412.0020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
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....................................................................................................................................................................................................AATTATTTA----------------AA-T-CAGCGTA-AGTGCA................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................ATTATTTA----------------AA-T-CAGCGTA-AGTGCA................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAT---------TCTAGACTGTAG------TCGATG--TGCAA--..................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CGTA-AGTGCATA--AA--GAACCGATTGTA............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTGTAG------TCGATG--TGCAA--GAAACGAAT.........................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTGTAG------TCGATG--TGCA.....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CT--ACAATTGCAA--A-GTACCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATG-GAACGAACAT---------TCTAGAC............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................C----AATATC------------------------------GCGATG-GAACGAACAT---------TCTAGAA............................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATG--TGCAA--GAAACGAATAAACTTT..................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAG------TCGATG--TGCAA--GAAACGA...........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................AC---GA-------ATCC----AATATC------------------------------GCGATG-......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTTTCAAAACTACAACATA-AA................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TA--AA--GAACCGATTGTATTATAAGTTG---------CA.......................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................T--ACAATTGCAA--A-GTACCAATAACTACG------CT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACG............................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GTATTATAAGTTG---------CATG-----------------TACC................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAACAT---------TCTAGACTGTAG------TCGAT............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGC..........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACTGTAG------TCGATG--TGCAA--G.................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TCC----AATATC------------------------------GCGATG-GAACGAACAT---------T..................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................GATTGTATTATAAGTTG---------CATG-----------------TACCA...............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................A-AC---GA-------ATCC----AATATC------------------------------GCGATG-GAACGAAC..............................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AACTACG------CTA--GTTAT----GTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATG-GAACGAACAT---------TCTAGACTG..........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CCT--ACAATTGCAA--A-GTACCAATAACTACG------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGTTTCCT--ACAATTGCAA--A-GTACCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGCGCCCCAA-AC---GA----------------ATATC------------------------------GCGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACATA-CTCCAC-------CTGCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------TCTAGACTGTAG------TCGATG--TGCAA--GA................................................2616.0060000006
...........................................................................................................................................................................................................TA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACCGA.................................................................................................................................................................................................................................................................................................2911.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................GA----------------ATATC------------------------------GCGATG-GAACGAACAT---------...................................................................................2311.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................TC------------------------------GCGATG-GAACGAACAT---------TCTAGACTG..........................................................................2711.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------GCGATG-GAACGAACAT---------TCTAGACTG..........................................................................2611.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------TCGATG--TGCAA--GAAACGAATAAA......................................2511.0010000010
.................................................................................................................................................................................................................................................................................................................TACCAA--------GT-----------------------------------------AATGCGCGCCCCAA-AC---GA----------------A...............................................................................................................................................2711.0011000000
................................................................................................................................................................................................................................................................TGTATTATAAGTTG---------CATG-----------------TA..................................................................................................................................................................................................................................................2011.0010000100
.......................................................................................................................................................................................................................................TA-AGTGCATA--AA--GAACCGATTGT.............................................................................................................................................................................................................................................................................................2311.0011000000
..................................................................................................................................................................................................................................CAGCGTA-AGTGCATA--AA--GAACCGAT................................................................................................................................................................................................................................................................................................2511.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG------TCGATG--TGCAA--GAAACGAATAAACA....................................2811.0011000000
......................................................................................................................................................................................................................................................................ATAAGTTG---------CATG-----------------TACCATACCAA--------.................................................................................................................................................................................................................................2311.0010001000
..................................................................................................................................................................................................A-AATTATTTA----------------AA-T-CAGCGTA-AGT...................................................................................................................................................................................................................................................................................................................2311.0010000100
droYak3
TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGCGCCCCAA-AC---GA----------------ATATC------------------------------GCGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACATA-CTCCAC-------CTGCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------TCTAGACTGTAG------TCGATG--TGCAA--GA................................................2711.00110000000000
..........................................................................................................................................................................................................TTA----------------AA-T-CAGCGTA-AGTGCATA--AA--GAACC...................................................................................................................................................................................................................................................................................................2811.00100100000000
....AACTCTGTTTCCT--ACAATTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................A-AC---GA----------------ATATC------------------------------GCGATG-GAACG.................................................................................................2111.00100100000000
................................................................................................................................................................................................................................................................................................................ATACCAA--------GT-----------------------------------------AATGCGCGCCC...........................................................................................................................................................................2011.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................GA----------------ATATC------------------------------GCGATG-GAACGAAC..............................................................................................2111.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGACTGTAG------TCGATG--TGCA.....................................................2211.00101000000000
droEug1
TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGCA-AGTGCATA--AA-TGAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGAGCCCCAA-AC---CA----------------ATATC------------------------------GAGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-CTCATC-------CTGTTSizeHit CountTotal NormTotal
No Reads
droBia1
TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGCA-AGTGCATA--AT-TGAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGAGCCCCAA-AC---GA----------------ATATC------------------------------GAGACG-AAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-CTCCAC-------CTGTTSizeHit CountTotal NormTotal
No Reads
droTak1
TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGCA-AGTGCATA--AA-TGAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGAGCCCCAA-AC---GA----------------ATATC------------------------------GAGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-TTTC--------------SizeHit CountTotal NormTotal
No Reads
droEle1
TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGCA-AGTGCATA--AG-TGAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GTAATGCG-----------------------------------AATGCGAGCCCCAC-AC---GA----------------ATATCGAGATCGTGATCGTGATCGGGATCGAGATCGATATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGCA-AGTGCATA--AA-TGAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGAACCCCAA-AC---GA----------------ATATC------------------------------GAGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-ATCAGA-------CTGCTSizeHit CountTotal NormTotal
No Reads
droFic1
TACTAACTCTGTTTCCT--ACAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGCA-AGTGCATA--AA-AGAACCGATTGTATTATAAGTTG---------CATG-----------------TACCATACCAA--------GT-----------------------------------------AATGCGAGCCCCAA-AC---GA----------------ATATCGAGATCGAGATCGGGATCGAGACCGAAATCGAGATG-GAACGAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-CACAAG-------AT-CTSizeHit CountTotal NormTotal
No Reads
droKik1
AACTAACTCTGTTTCCT--ACAATTGCAAAAA-GTACCAATAACTACG------CTAGAGTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AAAT-CAGCGCA-AGTGCATATAAA-CGAACCGATTGTAATATAAGTTG---------CATG-----------------TAAAATACCAACTAAAACCGTAATGCGT----------------------------------AATGCGAGCCCCAAGAC---GA----------------ATATCG---------------------------TCGAGATG-GAACGAACAT---------TCTAGACTGTAG-----TTCGATG--TGCAAACGAAACGAATAAACTTTCAAAACTACAACGTAACTCCACCACCACCCTGCTSizeHit CountTotal NormTotal
No Reads
droAna3
TACTAACTCTGTTTCCT--AAAATTGCAA--A-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGAG-AGTGCATA--AATCGAACCGATTGTATTATAAGTTG---------CATA-----------------AACCATACCAA--------GT-----------------------------------------AACGCGAGCCCCGA-AAATCGAAGAACAAAA--CAAGAGTATC------------------------------GCGAAG-GAACAAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAACCTAAAGCATA-CATCAT-------CTCCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................GTACCAATAACTACG------CTA--GT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGTATC------------------------------GCGAAG-GAACA.................................................................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................AA--CAAGAGTATC------------------------------GCGAAG-G.....................................................................................................1911.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................AA--CAAGAGTATC------------------------------GCGAAG-GAA...................................................................................................2111.001000010
.......................................................................................................................................................................................................................................AG-AGTGCATA--AATCGAACCGA.................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
TACTAACTCTGTTTCCT--AAAATTGCAAAAC-GTACCAATAACTACG------CTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA-AATTATTTA----------------AA-T-CAGCGAG-AGGGCATA--AAACGAACCGATTGTATTATAAGTTG---------CATA-----------------AACCATACCAA--------CT-----------------------------------------AACGCGATCCCCGA-AC---GATGA----AT-G----AATATC------------------------------GCGATG-GAACAAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAACCTAAAACATA-CACCAT-------C----SizeHit CountTotal NormTotal
No Reads
dp5
TACTAACTCTGTTTCCTATACAATTGCAAAAA-GTACCAATAACTACGC-----CTA--GTTAT----CTGTGTGTTAAA---------------------------------------------------------TAG-----------------------------------------------TATATATATAATTATTTA----------------AAATCCAGCGCC-AGTGCATA--AG-CGAAACGATTGTATTATATGT-ACGTAAGCTGCATGTTGCATGCAATGCACCCTACCATACCAT--------GT-----------------------GTGTACCATACTACGCAAAACGC------AAA-AC---GA-------ATCGC---AAT--CG------------------------A-ATCGAGATG-GAACGAACATGAAACATTCTCTAGACTGTAG------TCGATGTGTGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-C--CAC-------CCGC-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTAG------TCGATGTGTGCAA--GAAACG............................................2511.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCTCTAGACTGTAG------TCG..............................................................2211.0010100000000
droPer2
TACTAACTCTGTTTCCTATACAATTGCAAAAA-GTACCAATAACTACGC-----CTA--GTTAT----CTGTGTGTTAAA---------------------------------------------------------TAGT---------------------------------------------ATATATAT--AATTATTTA----------------AAATCCAGCGCC-AGTGCATA--AG-CGAAACGATTGTATTATATGT-ACGTAAGCTGCATGTTGCATGCAATGCACCATACCATACCAT--------GT-----------------------GTGTACCATACTACGCAAAACGC------AAA-AC---GA-------ATCGC---AAT--CG------------------------A-ATCGAGATG-GAACGAACATGAAACATTCTCTAGACTGTAG------TCGATGTGTGCAA--GAAACGAATAAACTTTCAAAACTACAACGTA-C--CAC-------CCGC-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................ATA--AG-CGAAACGATTGTATT..........................................................................................................................................................................................................................................................................................2013.003300000
....................................................................................................................................................................................................................................................................................................................................................................................................................CG------------------------A-ATCGAGATG-GAACGAACATGAAAC.......................................................................................2712.002200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACATTCTCTAGACTG..........................................................................1812.002200000
................................................................................................................................................................................................................................................................................................................................................................................................................AT--CG------------------------A-ATCGAGATG-GAACGAACATGAAA........................................................................................2811.001000001
droWil2
AACTAACTCTGTTTCCT--ACAATTGCAAAAAGGTACCAATAACTATGACTATGGTA--GTTAT------GTGTGTTAAA---------------------------------------------------------T------------------------------------------------ATATATATA--ATTAATTA----------------AA-A-TAACGCAAAGAGCATA--AA-TGAAACGATTGTATTATAAGTTG---------CATG-----------------TACGATGGATG-----ATGATGATGAGTAGTAGAAGAAGAAGAA------------------GATGCGATATC------------------------A------TG--------------------TA------CGAAGTGAAAACAAACAT---------TCTAGACTGTAG------TCGATG--TGCAA--GAAACGAATAAACTTTCAAAACTACAATGTA-ACCAAC-------C----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAT---------TCTAGACTGTAG------T................................................................1912.00220000
......................................................................................................................................................................................................................................................................ATAAGTTG---------CATG-----------------TACGATGGATG-----A...................................................................................................................................................................................................................................2411.00100010
...........................................................................................................................................................................................................................................GAGCATA--AA-TGAAACGATTGT.............................................................................................................................................................................................................................................................................................2111.00100010
droVir3
GACTAACTCTGTTTCCT--ACAATTGCAAA-A-GTACCAATAACTATG------GTA--GTTGTGTATGTGTGTGTTTAACATATATAGTTATA-------------------------------------------A-------------------------------------AAAATTAAAAAATATAT-TT-AATTATTTACATTTAATGTACTTTTAG-T-CAGCGGT-AGT----A--AA-TGAAACGACTGTAAAATAAGTTACGCAAA---TATG-----------------TACGATATATT--------GT-----------------------------------------AAC------------------------------------------------------------------------TAAC-GAACGAACCT---------TTTAGACTCTAGGC---TTCGATG--TGCAA--GAAACGAATAAAATTA----------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---TTCGATG--TGCAA--GAAACGAA..........................................2111.001000000000000000100000000000000000000000000000000000000000000000
..............................................TG------GTA--GTTGTGTATGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................A---TATG-----------------TACGATATATT--------GT-----------------------------------------A.....................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AATGTACTTTTAG-T-CAGCGGT-A.....................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................TTTTAG-T-CAGCGGT-AGT----A--AA-TGA......................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
GACTAACTCTGTTTCCT--ACAATTGCAAA-A-GTACCAATAACTATG------GTA--GTTGT----GTATGTGTTTAACATAT--AGTTATATGTATACATACAAATAAATATATGCATATATATTACTTATATAT-GTATATATATATTACTTATATATGCATATATATACATAA----ATAAATATAT-TT-AATTATTTACATTTAATGTACTTTTAG-T-CAGCGGT-AGTA------AA-TGAAACGACTGTAAAATAAGTTACGAAAT---TATG-----------------TACGATATAAT--------GT-----------------------------------------AACT------------------------------------------------------------------------AAC-AAACGAACCT---------TTTAGACTTTAGGC---TTCGATG--TGCAA--GAAACGAATAAAATTA--------AAACA---------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................ATGTACTTTTAG-T-CAGCGGT-A.....................................................................................................................................................................................................................................................................................................................2111.001000010
...............................................................................................................................................................................................................................................................................GAAAT---TATG-----------------TACGATATAAT--------GT-----------------------------------------......................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................................................AGTA------AA-TGAAACGACTGTAAAATAAGT....................................................................................................................................................................................................................................................................................2711.001100000
.............TCCT--ACAATTGCAAA-A-GTACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................TTTAATGTACTTTTAG-T-CAGCGGT-AG....................................................................................................................................................................................................................................................................................................................2611.001100000
..................................................................................TAT--AGTTATATGTATACATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331100000
droGri2
GACTAACTCTGTTTCCT--ACAATTGC---------------------------------------------GTGTTTAACATATACAGTTATA-------------------------------------------T------------------------------------------------ATATATTT--AATTATTTACAATTACTGTACTATTAG-T-CATCGGT-AGTAAATAAAAA-AGAAACGACTGTAAAATAAGTTACGGAAAATTTATG-----------------TACGATATAAT--------GT-----------------------------------------AACT---------A--------------------------------------------------------------ACG-AAACGAACCT---------TTTAGATTTTAGGCTTCTTCAATG--TGCAA--GAAACGAATAAAATTTAAAAAAAAAAACTTG-T--CA-------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:49 PM