ID:

dsi_17382

 Coordinate:

2r:7363627-7363776 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.9 -11.9 -11.6

Flybase annnotation

three_prime_UTR [2r_7363205_7364527_+]; exon [2r_7363191_7364527_+]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
TTAAATGTTATGCTACCATTTAACTACTAAGCGTATGCAAACCACTTGAACGTTTGATGGTTCTGGCACCTATCGCCAGTTGCTGCTTCCACATTCCACGTGCATCTTTCGCGGCATTCTGCCCGAGGAGCGTCACCCAGCACACACACACATCGCCTCCATCCCAGCTTATATTAATTTTGTGTATTCTATCATCATAGATGAGAAGCAAAACTCATGCGATCATAGTTAAGATTACGACATTTTAAAT
***************************************************************************************.............(((.((((.((.((((...)))))))))))))..........................******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 M025
embryo
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
 SRR902009
testis
...................................TGCAAACCACTTGAACGTTTGATGGT............................................................................................................................................................................................. 26 0 1 5.00 5 0 0 0 3 2 0 0 0 0 0 0 0 0
.............................................TTGAACGTTTGATGGTTCTGGCACC.................................................................................................................................................................................... 25 0 1 3.00 3 0 0 2 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TGTGTATTCTATCATCATAGATGAGA............................................ 26 0 1 3.00 3 0 0 0 2 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CATGCGATCATAGTTAAGAT............... 20 0 1 3.00 3 1 1 0 0 0 0 1 0 0 0 0 0 0
................................GTATGCAAACCACTTGAACGTTTGAT................................................................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................ACGTTTGATGGTTCTGGC....................................................................................................................................................................................... 18 0 1 2.00 2 0 0 0 0 0 0 0 0 0 2 0 0 0
....................TAACTACTAAGCGTATGCAAACCACT............................................................................................................................................................................................................ 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TTTGTGTATTCTATCATCATAGATGAGA............................................ 28 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 1 0 0
...........................................ACTTGAACGTTTGATGGTTCTGG........................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................TACTAAGCGTATGCAAACCACTTGAACGTT.................................................................................................................................................................................................... 30 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................CATCTTTCGCGGCATTCTGCCCGTGG.......................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TCCACATTCCACGTGCATCTTTCGCGG........................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GATCATAGTTAAGATTACGAC......... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CATCATAGATGAGAAGCA........................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGCCCGAGGAGCGTCACCCTGCAC........................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ATGCGATCATAGTTAAGATTACGACA........ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CGTCACCCAGCACACACACACATCGCCT............................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........ATGCTACCATTTAACTACTA............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................CTTTCGCGGCATTCTGCCCGAGG.......................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................ACCTATCGCCAGTTGCTGCTTCCAC.............................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................CCACGTGCATCTTTCGCGGC....................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................CACCTATCGCCAGTTGCTGC.................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATCATAGTTAAGATTACGACATTTT.... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................TTTCGCGGCATTCTGCCCGAGGAGC....................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATCATAGTTAAGATTACGAC......... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................ATCTTTCGCGGCATTCTGCCCGAGGA......................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................TTGATGGTTCTGGCACCT................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................CACCTATCGCCAGTTGCTG..................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................TCATGATAGACGAGAAGCAAAATT................................... 24 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CATAGTTAAGATTACGAC......... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................AACCACTTGAACGTTTGATG............................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................AAGCGTATGCAAACCA.............................................................................................................................................................................................................. 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................AACCACATGAACGTTTGATGGTTCTGG........................................................................................................................................................................................ 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................TGCAAACCACTTGAACGTTTGATGG.............................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................TCCATCCCAGCTTATATTAATTTTGTG.................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................GTTTGATGGTTCTGGCAC..................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................ATCTTTCGCGGCATTCTGCCTGAGGA......................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................CACCTATCGCCAGTTGCTGCTT.................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CTATCATCATAGATGAGAAGCA........................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................GCCAGTTGCTGCTTCCAC.............................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................ATGCGATCATAGTTAAGA................ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........ATGCTACCATTTAACTAC............................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GAGCGTCACCCAGCACACAC....................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................GCATCTTTCGCGGCATTCTGCCCGAGG.......................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................ATCTTTCGCGGCATTCTGC................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................GCGTCACCCAGCACACACACACATCGC.............................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CATAGTTAAGATTACGACATTT..... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................TGAACGTTTGATGGTTCTGGCACCTAT................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
............................AAGCGTATGCAAACCACT............................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................GAACGTTTGATGGTTCTGGC....................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGGCACCTATCTCCAGTTGCTGCTT.................................................................................................................................................................. 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................TTGTGTATTCTATCATCATAGATGAGA............................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................GTCACCCAGCACACACACACATCGCCT............................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................ATTCTGCCCGAGGAGCG...................................................................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TTTTGTGTATTCTATCATCATAGATGAGA............................................ 29 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................TATCGCCAGTTGCTGCTTCCACAA............................................................................................................................................................ 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................CGCGGCATTCTGCCCGAGGAGCGTC.................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................TGCATCTTTCGCGGCATTCTGCCCGA............................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................AGCGTATGCAAACCACTTGAACGTT.................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TTTTGTGTATTCTATCATCATAGA................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................TGAGAAGCAAAACTCA................................. 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................CACTTGAACGTTTGATGGTT............................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
...........................TAAGCGTATGCAAACCACTTGAACGTT.................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................TTTCGCCAGTTGCTATTTCCA............................................................................................................................................................... 21 3 10 0.50 5 0 0 0 0 5 0 0 0 0 0 0 0 0
..................................................................................................................CATTCTGCACGAGGAGCGTA.................................................................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................................................TGCGATCATAGTTAAGT................ 17 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGCGAAGCCAAACTGATGCGAT........................... 22 3 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................CACGTGCATCTTTCGA.......................................................................................................................................... 16 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................GTTCGATGGTTCGGGCAC..................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................ACCACCTGAACGTGTGA................................................................................................................................................................................................. 17 2 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................TTTGATGGTTCGGGC....................................................................................................................................................................................... 15 1 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................GTTCGATGGTTCGGGCA...................................................................................................................................................................................... 17 2 14 0.07 1 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................GCCCGAGGAGCGTCGTCCC............................................................................................................... 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................CCTTTGATCGTTTTGGCACC.................................................................................................................................................................................... 20 3 15 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.........ATGCTACCATGGAAGTACT.............................................................................................................................................................................................................................. 19 3 19 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AATTTACAATACGATGGTAAATTGATGATTCGCATACGTTTGGTGAACTTGCAAACTACCAAGACCGTGGATAGCGGTCAACGACGAAGGTGTAAGGTGCACGTAGAAAGCGCCGTAAGACGGGCTCCTCGCAGTGGGTCGTGTGTGTGTGTAGCGGAGGTAGGGTCGAATATAATTAAAACACATAAGATAGTAGTATCTACTCTTCGTTTTGAGTACGCTAGTATCAATTCTAATGCTGTAAAATTTA
********************************************************************************************.............(((.((((.((.((((...)))))))))))))..........................*************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR618934
dsim w501 ovaries
 M053
female body
...................................................................................................................................................................................................................................AAATTCTAATGCTGTAAAATT.. 21 1 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................TAGCGGTCAACGACGAAGGTGTAAGGT........................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0
......CAACAAGATGGTAATTTGAT................................................................................................................................................................................................................................ 20 3 11 0.91 10 0 0 0 7 0 2 0 1
.............ATGGTAACTTGATGA.............................................................................................................................................................................................................................. 15 1 9 0.78 7 3 0 4 0 0 0 0 0
...........AGATGGTAACTTGATGAT............................................................................................................................................................................................................................. 18 2 5 0.60 3 3 0 0 0 0 0 0 0
...............GGTAACTTGATGATGCG.......................................................................................................................................................................................................................... 17 2 8 0.38 3 0 0 0 0 3 0 0 0
.............ATGGTAACTTGATGATCCG.......................................................................................................................................................................................................................... 19 2 3 0.33 1 1 0 0 0 0 0 0 0
............GATGGTAACTTGATGATC............................................................................................................................................................................................................................ 18 2 3 0.33 1 1 0 0 0 0 0 0 0
...........AGATGGTAACTTGATGATC............................................................................................................................................................................................................................ 19 3 14 0.29 4 4 0 0 0 0 0 0 0
...........................................................................................................AAGCGCCTTAAGACG................................................................................................................................ 15 1 8 0.13 1 0 0 1 0 0 0 0 0
............GATGGTAACTTGATGAC............................................................................................................................................................................................................................. 17 2 9 0.11 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTCGTGTTGAGTAGGCT............................ 17 2 20 0.10 2 0 0 2 0 0 0 0 0
........................................................................AGCGGTCAACGATAAAGGTA.............................................................................................................................................................. 20 3 20 0.10 2 2 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TACCAATTCTGATGCTGC........ 18 3 20 0.10 2 0 0 0 1 0 1 0 0
.....................................GTTTAGTGAACATGCAAA................................................................................................................................................................................................... 18 2 10 0.10 1 0 0 0 0 0 0 1 0
.......................................TTGCTGAACTTGCAAAT.................................................................................................................................................................................................. 17 2 12 0.08 1 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................ATCAATTCTGATGCTGCCA...... 19 3 12 0.08 1 0 0 1 0 0 0 0 0
....................................................................................................AGGTAGAAAGCGCCATA..................................................................................................................................... 17 2 13 0.08 1 0 0 0 0 0 0 1 0
...........AGATGGTAACTTGATGA.............................................................................................................................................................................................................................. 17 2 14 0.07 1 1 0 0 0 0 0 0 0
..............................................AGTTGCAAACTAGCAA............................................................................................................................................................................................ 16 2 20 0.05 1 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:7363577-7363826 + dsi_17382 TTAA-----ATGTTAT--------GCTACCATTTAACTACT----AAGCGTAT---GC-AAA------CCACTTG------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------GTTCTGGC-------ACCTATCGCCAGTTGCTGCTT-CCACATTCCACG-----TGCAT-CT-TTCGCGGCAT---------------------TCTGCCCGAGGAGC-GTCAC--CC--------AGCACACACACACATCGCCTCCATCC----------------------------CAGCTTA-----TATTAATTTTGTGTATTC---------TATCATCA-TAGATGAGAAGCAA---AACTCATGCG--ATCAT---A-GTTAAGATT---------------------------------ACGACATTTTAAAT
droSec2 scaffold_1:4205491-4205738 + TTAA-----ATGTTAT--------GCTACCATTTAACTACT----AAGTGTAT---GC-AAA------CCACTTG------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------GTTCTGGC-------ACCTATCGCCAGTTGCTGCTT-CCACATTCCACG-----TGCAT-CG-TTCGCGGCAT---------------------TCTGCCCGAGGAGC-GTCAC--CC--------AG--CACATACACATCGCCTCCATCC----------------------------CAGCTTA-----TATTAATTTTTTGTATTT---------TATCATCA-TAGATGAGAAGCAA---AACTCATGCG--ATCAT---A-GTTAAGATT---------------------------------ACGACATTTTAAAT
dm3 chr2R:6625261-6625512 + TTAA-----ATGTTAT--------CCTACCATTTAACCACT----AAGCGTAT---GC-AAA------CCACTTG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACCTCGCGCCAGTTGCTGCTT-CCACATTCCACA-----TGCAT-CG-TTCGCGGCATTT-------------------TCTGCCCGAGTAGC-GTGAC--CC--------AGCACACACACACATCGCCTCCATCC----------------------------CAGCTTA-----TATTAATTTTGTGTATTT---------TATCATCA-TAGATGAGAAGCAA---AACTCATGCG--ATCAT---A-GTTAAGATT---------------------------------ATGACATTTTAAAT
droEre2 scaffold_4845:19152060-19152309 - TTAA-----ATGTTAT--------GCTACCATTTAACTACT----AGGCGTAT---GC-A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATCGCCGGTTACTGCTT-CCACATTCCACG-----AGCAT-CG-TTCGCGGCAT---------------------TCTGCCCAAGGAGACATTCTACCC--------AA--CCAACACACAACCCCTCCATCC----------------------------CAGCTTA-----TATTAATTCTGTGTATTT---------TCTCATCC-TAGATGAGAAGCAA---AACTCATGCG--ATCAT---A-GTTAAGTTT---------------------------------ACAGCATTTTAAAT
droYak3 2R:2533744-2533991 - TTAA-----ATGTTAT--------GCTACCATTTAACTACT----AGGCGTAT---GC-AAA------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------AGTTGTCGCCAGTTACTGCTT-CCACATTCCACG-----AGCAT-CG-TTCAAGGCAT---------------------CCTGCCCGAGGAGC-GTGAC--CC--------AA--CACACATACTACGCCTCTATCC----------------------------CAGCTTA-----TATTAACTTTGTGTATTT---------TATCATCC-TAGATGAGAAGAAA---AACTCATGCG--ATCAT---A-GTTAAGTTT---------------------------------ACAACATTTTAAAT
droEug1 scf7180000409672:4408204-4408449 - TTAA-----ATGTTAT--------GCTACCATCTAACTACT----AGGCTTAT---GC-AAA------CCAATCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATCGCCAGCCGCTGCTT-CCACATTCCATG-----AGCAT-CG-TTCGAGGCAT---------------------CCGGGCCAAGTAG---TGAT--TT--------AA--CCCATATATTATGCCTCCATCC----------------------------CAGCTTA-----TATTTACTGTGTATATTT---------TATCATCT-TAGATGCAACGCGA---AACTCATGAG--TTCAT---A-GTTAAGTTT---------------------------------ACAACATTTAAAAT
droBia1 scf7180000301506:324054-324311 + TTAA-----ATGTTAT--------GCTACCAACTAACTACT----AGGCGTAT---GC-AAACCCAAACCAGTCG------------------------------------------------AACGTT--CG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATCGCCAGCCGCTGCTT-CCACATTCCACA---CGAGCAT-CG-TTCGAGGCAT---------------------CCGGCCCGAGGAGC-GTGAT--CC--------CA--TCCAC---CAATGCCTCCATCC----------------------------CAGTTTACTCTATATTAATTGTGTATATTT---------TATCATCC-TAGATGCGATGCGA---AACTCATGAG--ATCAT---A-GTTAAGTTT---------------------------------ACCACATTTCAAAT
droTak1 scf7180000415877:200300-200547 - TTAA-----ATGTTAT--------GCTACCATCTAACTACT----AGGCGTAT---GC-AAA------CCGATCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATGGCCAGCCGCTGCTT-CCACATTCCACG-----AGCAT-CG-TTCGAGGCAT---------------------CCGGCCCAAGGAGC-GTGAT--CC--------CA--CCCACATATTATGCCTCCATCC----------------------------CAGCTTA-----TATTAATCGTGTATATTT---------TATCATCT-TAGATGCGATGCGA---AACTCATGAT--ATCAT---A-GTTAAGTTT---------------------------------ACGACATTTCAAAT
droEle1 scf7180000491349:841849-842105 - TTAA-----ATGTTAT--------GCTACCATCTAACTACT----AGGCGTAT---GT-AAA------CCAACCAACC---------------------------------------GACGTGAACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATCGCCAGTCGCTGCTT-CCACATTCCACG-----AGCAT-CG-TTTGAGGCAT---------------------CCGGTCCCAGTAGC-GTAAT--CC--------AA--TCCACATATGAAGCCTCCTTCC----------------------------CAGCTTA-----TTTTAATTGTGTATATTT---------AATCATCC-TAGATGCATTGCGA---AACTCATGAG--CTCAT---A-GTTAAGTTT---------------------------------ACAACATTTCAAAT
droRho1 scf7180000779999:147153-147402 - TTAA-----ATGTTAT--------GCTACCATCTAACTACT----AGGCGTAT---GC-AAA------CCGACCG-------------------------------------------ACGTGAACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATCGCCAGTCGCCGCTT-CCACATTCCACC-----AGCAT-CG-TTTGAGGCAT---------------------CCTGCTCG-GAAGT-GTGAT--GC--------AA--CCGGCATA--ATGACTCCTTCC----------------------------CAGCTTA-----TTTTTATTGTGTACATTT---------AATCATCT-TGGATGCGATGCGA---AACTCATGAG--CTCAT---A-GTTAAGTTT---------------------------------ACAACATTTCAAAT
droFic1 scf7180000454066:1072766-1073016 - TTAA-----ATGTTAC--------GCTACCATCTAACTAAT----AGGCGTAT---GC-GAA------CCGACCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATCGCCAGCCGCTGCTT-CCACATTCCACG-----AGCAT-CG-CTCGAGGCAT---------------------CCGGCCCGAGGAGC-GTGAT--CT---------A--CCCACATATTATGCCTCTAACC----------------------------CAGTTTA-----TTTAAATTGTGTATATTT---------TATCAACT-TAAAAGCGATGCAAAAAAACTCATGTAT-ATCAT---A-GTTAAGTTT---------------------------------ATGACATTTCAAAT
droKik1 scf7180000302481:86436-86658 + TTAA-----ATGTTAT--------GCTACCATCTAATGACTACCCAGGCGCAT---GT-AAA------GCAACCA------------------------------------------------AACGTC--TG---------------------------AT-------AC----A----------------GATCT---------------------GCTGCTGCTT-CCACATTCCACGTCTTGGGCAT-CG-TCCGAGA--------------------------------TGAAGC-ATGAT--CC--------AG--------------GCTTC-AACT--------TAT-----------------CAGCTTA-----TGTTAACTTTGTATATGT---------TTGC-CCT-TAAAATCCAAGCAA---AACTCATGAA--ACCAT---AAGTTAAGTCG---------------------------------A-GACATTTCAAAT
droAna3 scaffold_13266:18117328-18117563 + TTAA-----ACGTTAT--------GCTACCATCTAACTATT----AGGCGTAT---GTCGAA------CCAACCA------------------------------------------------ATCGCTACCG-CTATCGGCC----------AACACTGTT---TAATATAGTTA----------------GTGCTGGCTGTAGTTAGTTTCCGCCAGCCGCTGCTT-CCACATTCCAAG-----GGCAAGCG-AC-TCCGGAG---------------------CCGGCTCGAGAAGC-GTGAT--C------------------------------CACCC----------------------------GAGTTTA-----TGTTAAATGTGTATATT----------GATCATCTATATATGGAAAG--------------------CAT---A-GT----------------------------------------------TTTGAATT
droBip1 scf7180000396735:1390367-1390561 + TTAA-----ACGTTAT--------GCTACCT----ACTATT----AGGCGCT-------------------ATCG--------------------------------------------------C---------TATCGGCC----------ACCACTGTT-------------C----------------GTCCTGGCTATAGGTAGTTTCCGCCAGCCGCTGCTT-CCACATTCCAAG-----AGCAA-------GCGAC-T---------------------CCGGCTCGAGAAGC-GTGAT--C------------------------------CACCC----------------------------GAGTTTA-----TGTTAAATGTGTATATT----------GATCATCTATATA-------------------TGAA--AGCAT---A-GT----------------------------------------------TTTGAACT
dp5 3:16022808-16023013 - TTAA-----ATGTTAT--------GCTATCATCTAAC---T----AAGCGTAT---GT-GAA------CTAATCA--------------------------------------------------C---------GATCTGCCAA------------TTG------------------------------------------------TTTGTCCCCAGCAGTTGCTT-CCACATTCCACA-----GGCAT-CCCTTCGAGA-AGCCGCTGCTTGGT---------CCTGGCTGGA-------GAT--GG--------AA--CCC-----------TTAAATCC----------------------------CA----------------------------------------CATC--TAAA--CGAATCGA---AAGTCATGAGTCATCGT---A-GTTAAGTT----------------------------------GAAACATTTGAAAT
droPer2 scaffold_4:742483-742688 + TTAA-----ATGTTAT--------GCTATCATCTAAC---T----AAGCGTAT---GT-GAA------CTAATCA--------------------------------------------------C---------GATCTGCCAA------------TTG------------------------------------------------TTTGTCCCCAGCAGTTGCTT-CCACATTCCACA-----GGCAT-CCCTTCGAGA-AGCCGCTGCTTGGT---------CCTGGCTGGA-------GAT--GG--------AA--CCC-----------TTAACCCC----------------------------CA----------------------------------------CATC--TAAA--CGAATCGA---AAGTCATGAGTCATCGT---A-GTTAAGTT----------------------------------GAAACATTTGAAAT
droWil2 scf2_1100000004512:1900280-1900518 - TTAT-----ATGTTAATCATATTTCCTACCACCTAAACA---------------------AA------AAAATCA--------------------------------------------------CATT--TG--------TAAATATTGTACATCTTCGCTCTTCTACAAAAACAAAAATGGTGCAAGGGGAAGCACACT-----------------AAAACTGCATCCCACATTCCATT-----G-CAC-CCATTTAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----TATACATTTTTTAAATTTTAGCCATTTCCT---CA-TGAGTTGAGTTTGG---AACTCATTTT--C--GC---A-GAC----AC---------------------------------ATCAAATGTTAAAT
droVir3 scaffold_12875:16631000-16631305 + TTAA-----ATGTTAT--------GAAAACC-TTAACAATT----AAGCCTACTCTGT-AACA-----CCAATCCACTCCACTCCACTCCACTCTCCGCCCCCCTTTCCAGTTCACTTCCGCACACCTC--TG---------------------------AT-------------G---------C------GCGCCGGC-------ACA----GGCTGTGGCAGCTG-CCACATTCCAAG-----TCAAG-CC-TAAGCAGCT------GCACGCACTGTGCTGGCCGACTCGAAGAG--GTGGC---A--------AA--TCCATAGAAAACA-------CCCATTTAATTATAAATGTTTATTTATATA-------------------T--ATATGATT---------T-----------GTAATTTGTAT---AAAGCATGCT---TAATGGAT-TTGAAAATG---------------------------------TATTCGTTGTATAT
droMoj3 scaffold_6496:7117232-7117516 - TTAAATTAAATGTTAT--------GAAAACC-TTATAAACT----AAGCCCATTCTGT-AAAA-----GAAATCA------------------------------------------------AACGCC--CGCCTCACGCCC----------ATCATCGCA-------------T----------------CTTC-CGC-------ACA-GGCTCTGGCAGCTGCTGCCCACATTCCAAG-----TCAAG-CC-CAAGCAGCT------GT--------------TCGGACTGAGCAGG-CCGAC--TCCATGAGGCG-----------------ACCAATCCCATCTAATCTATAATTCTTATTTATGTA-------------------T--TTGTATAT---------TATAATTT--------------------------------TGT---A-ATTGTATTTCTAACTGTTGTCGAGAAAAAAAAAGAAAAAGAAAAATCATTTAAAAA
droGri2 scaffold_15245:5457525-5457558 + TTAA-----ACGTTAT--------TGA-GACCCTAACAATT----AAGCATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTAA-----ATGTTAT--------GCTACCATTTAACTACT----AAGCGTAT---GC-AAA------CCACTTG------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------GTTCTGGC-------ACCTATCGCCAGTTGCTGCTT-CCACATTCCACG-----TGCAT-CT-TTCGCGGCAT---------------------TCTGCCCGAGGAGC-GTCAC--CC--------AGCACACACACACATCGCCTCCATCC----------------------------CAGCTTA-----TATTAATTTTGTGTATTC---------TATCATCA-TAGATGAGAAGCAA---AACTCATGCG--ATCAT---A-GTTAAGATT---------------------------------ACGACATTTTAAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................T---GC-AAA------CCACTTG------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------GT.................................................................................................................................................................................................................................................................................................................................2615.00500000032000000000
........................................................................TTG------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------GTTCTGGC-------ACC.................................................................................................................................................................................................................................................................................................................2513.00300000001002000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTGTATTC---------TATCATCA-TAGATGAGA......................................................................................2613.00300000021000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCG--ATCAT---A-GTTAAGAT................................................2013.00301110000000000000
.................................................GTAT---GC-AAA------CCACTTG------------------------------------------------AACGTT--TG---------------------------AT-------------....................................................................................................................................................................................................................................................................................................................................................2612.00200020000000000000
............................................................................................................................ACGTT--TG---------------------------AT-------------G----------------GTTCTGGC-------....................................................................................................................................................................................................................................................................................................................1812.00200000200000000000
.................................TAACTACT----AAGCGTAT---GC-AAA------CCACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000002000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGTATTC---------TATCATCA-TAGATGAGA......................................................................................2812.00200000010100000000
......................................................................ACTTG------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------GTTCTGG............................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.....................................TACT----AAGCGTAT---GC-AAA------CCACTTG------------------------------------------------AACGTT--................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000001000000000
...................................................................................................................................................................................................................................T-CCACATTCCACG-----TGCAT-CT-TTCGCGG.............................................................................................................................................................................................................................................................2711.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................G--ATCAT---A-GTTAAGATT---------------------------------ACGAC.........2111.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CATCA-TAGATGAGAAGCA..................................................................................1811.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCG--ATCAT---A-GTTAAGATT---------------------------------ACGACA........2611.00101000000000000000
...........................................................................................................................................................................................................................................................................................................C-GTCAC--CC--------AGCACACACACACATCGCCT.................................................................................................................................................................................2811.00100010000000000000
..............AT--------GCTACCATTTAACTACT----A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
............................................................................................................................................................................................................................................................CT-TTCGCGGCAT---------------------TCTGCCCGAGG..........................................................................................................................................................................................................................2311.00100010000000000000
...............................................................................................................................................................................................................ACCTATCGCCAGTTGCTGCTT-CCAC..........................................................................................................................................................................................................................................................................................2511.00100010000000000000
............................................................................................................................................................................................................................................CCACG-----TGCAT-CT-TTCGCGGC............................................................................................................................................................................................................................................................2011.00100010000000000000
.......................................................................................................................................................................................................C-------ACCTATCGCCAGTTGCTGC.................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAT---A-GTTAAGATT---------------------------------ACGACATTTT....2511.00100000000000010000
.............................................................................................................................................................................................................................................................T-TTCGCGGCAT---------------------TCTGCCCGAGGAGC-......................................................................................................................................................................................................................2511.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAT---A-GTTAAGATT---------------------------------ACGAC.........2011.00101000000000000000
.........................................................................................................................................................................................................................................................AT-CT-TTCGCGGCAT---------------------TCTGCCCGAGGA.........................................................................................................................................................................................................................2611.00101000000000000000
................................................................................................................................T--TG---------------------------AT-------------G----------------GTTCTGGC-------ACCT................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.......................................................................................................................................................................................................C-------ACCTATCGCCAGTTGCTG..................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT---A-GTTAAGATT---------------------------------ACGAC.........1811.00101000000000000000
............................................................AA------CCACTTG------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------...................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.............................................AAGCGTAT---GC-AAA------CCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
....................................................T---GC-AAA------CCACTTG------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------G..................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................TCCATCC----------------------------CAGCTTA-----TATTAATTTTGTG......................................................................................................................2711.00100010000000000000
..............................................................................................................................GTT--TG---------------------------AT-------------G----------------GTTCTGGC-------AC..................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.......................................................................................................................................................................................................C-------ACCTATCGCCAGTTGCTGCTT-..............................................................................................................................................................................................................................................................................................2211.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................C---------TATCATCA-TAGATGAGAAGCA..................................................................................2211.00100010000000000000
......................................................................................................................................................................................................................GCCAGTTGCTGCTT-CCAC..........................................................................................................................................................................................................................................................................................1811.00100001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCG--ATCAT---A-GTTAAGA.................................................1811.00100000010000000000
..............AT--------GCTACCATTTAACTAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
........................................................................................................................................................................................................................................................................................................GAGC-GTCAC--CC--------AGCACACAC............................................................................................................................................................................................2011.00100001000000000000
.......................................................................................................................................................................................................................................................GCAT-CT-TTCGCGGCAT---------------------TCTGCCCGAGG..........................................................................................................................................................................................................................2711.00100010000000000000
.........................................................................................................................................................................................................................................................AT-CT-TTCGCGGCAT---------------------TCTGC................................................................................................................................................................................................................................1911.00101000000000000000
..........................................................................................................................................................................................................................................................................................................GC-GTCAC--CC--------AGCACACACACACATCGC...................................................................................................................................................................................2711.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT---A-GTTAAGATT---------------------------------ACGACATTT.....2211.00100010000000000000
.........................................................................TG------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------GTTCTGGC-------ACCTAT..............................................................................................................................................................................................................................................................................................................2711.00100000000010000000
.............................................AAGCGTAT---GC-AAA------CCACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
..........................................................................G------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------GTTCTGGC-------....................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTATTC---------TATCATCA-TAGATGAGA......................................................................................2711.00100000001000000000
.............................................................................................................................................................................................................................................................................................................GTCAC--CC--------AGCACACACACACATCGCCT.................................................................................................................................................................................2711.00100001000000000000
.......................................................................................................................................................................................................................................................................AT---------------------TCTGCCCGAGGAGC-G.....................................................................................................................................................................................................................1711.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGTATTC---------TATCATCA-TAGATGAGA......................................................................................2911.00100000001000000000
..................................................................................................................................................................................................................TATCGCCAGTTGCTGCTT-CCACAA........................................................................................................................................................................................................................................................................................2411.00100000000000010000
.................................................................................................................................................................................................................................................................CGCGGCAT---------------------TCTGCCCGAGGAGC-GTC...................................................................................................................................................................................................................2511.00100000000001000000
......................................................................................................................................................................................................................................................TGCAT-CT-TTCGCGGCAT---------------------TCTGCCCGA............................................................................................................................................................................................................................2611.00100010000000000000
..............................................AGCGTAT---GC-AAA------CCACTTG------------------------------------------------AACGTT--................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTGTATTC---------TATCATCA-TAGA...........................................................................................2411.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAAGCAA---AACTCA........................................................................1611.00100000000001000000
.....................................................................CACTTG------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------GTT................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
........................................T----AAGCGTAT---GC-AAA------CCACTTG------------------------------------------------AACGTT--................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCG--ATCAT---A-GTTAAGT.................................................1720.50100000000001000000
.............................................................................................................................................................................................................................................CACG-----TGCAT-CT-TTCGA...............................................................................................................................................................................................................................................................1640.25100000000001000000
droSec2
TTAA-----ATGTTAT--------GCTACCATTTAACTACT----AAGTGTAT---GC-AAA------CCACTTG------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------GTTCTGGC-------ACCTATCGCCAGTTGCTGCTT-CCACATTCCACG-----TGCAT-CG-TTCGCGGCAT---------------------TCTGCCCGAGGAGC-GTCAC--CC--------AG--CACATACACATCGCCTCCATCC----------------------------CAGCTTA-----TATTAATTTTTTGTATTT---------TATCATCA-TAGATGAGAAGCAA---AACTCATGCG--ATCAT---A-GTTAAGATT---------------------------------ACGACATTTTAAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................G-TTCGCGGCAT---------------------TCTGCCCGAGGAGC-......................................................................................................................................................................................................................2513.0030030
...........................................................................................................................AACGTT--TG---------------------------AT-------------G----------------GTTCTGG............................................................................................................................................................................................................................................................................................................................1812.0022000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATCA-TAGATGAGAAGCAA---AACT..........................................................................2212.0020110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................A---AACTCATGCG--ATCAT---A-GT......................................................1911.0010010
...........................................................................................................................AACGTT--TG---------------------------AT-------------G----------------GTTCTGGC-------....................................................................................................................................................................................................................................................................................................................1911.0011000
...................................ACTACT----AAGTGTAT---GC-AAA------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.......................................................................CTTG------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------GTTCTGGC-------....................................................................................................................................................................................................................................................................................................................2311.0010010
..........................................................................................................................................................................................................................................................................................................................................CATCGCCTCCATCC----------------------------CAGCTTA-----TAT................................................................................................................................2411.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAA---AACTCATGCG--AT................................................................1911.0010010
.....................................................................................................................................................................................................................................................................................................................................ATACACATCGCCTCCATCC----------------------------CAGC...........................................................................................................................................2311.0010010
............................................................................................................................................................................................................................................CCACG-----TGCAT-CG-TTCGCGGC............................................................................................................................................................................................................................................................2011.0010010
..........................................................................G------------------------------------------------AACGTT--TG---------------------------AT-------------G----------------GTTCTGGC-------....................................................................................................................................................................................................................................................................................................................2011.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAT---A-GTTAAGATT---------------------------------ACGACA........2011.0011000
......................................................................................................................................................................................................................................CACATTCCACG-----TGCAT-CG-TTCGCGGC............................................................................................................................................................................................................................................................2611.0010010
.................................................................................................................................................................................................................................................................CGCGGCAT---------------------TCTGCCCGAGGAGC-......................................................................................................................................................................................................................2211.0010010
.....................................................................................................................................................................................................................................................................................................................................ATACACATCGCCTCCATCC----------------------------CAGCTT.........................................................................................................................................2511.0010010
.............................................................................................................................................................................................................................................................................................................GTCAC--CC--------AG--CACATACACATCGCCT.................................................................................................................................................................................2511.0011000
...................................................................................................................................................................................................CTGGC-------ACCTATCGCCAGTTGCTGCTT-..............................................................................................................................................................................................................................................................................................2611.0010010
...............................................................................................................................................................................................................................TGCTT-CCACATTCCACG-----TGCAT-C......................................................................................................................................................................................................................................................................2311.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT---A-GTTAAGATT---------------------------------ACGACAT.......2011.0011000
.........................................................................................................................................................................................................................................ATTCCACG-----TGCAT-CG-TTCGCGGC............................................................................................................................................................................................................................................................2311.0010010
..................................................................................................................................................................................................................................................................GCGGCAT---------------------TCTGCCCGAGGAGC-......................................................................................................................................................................................................................2111.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCATGCG--ATCAT---A-GTTAAGA.................................................2211.0011000
.............................................................................................................................................................................................................................................................G-TTCGCGGCAT---------------------TCTGCCCGAGGAGC-GTC...................................................................................................................................................................................................................2811.0010100
.....................................TACT----AAGTGTAT---GC-AAA------CCACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT---A-GTTAAGATT---------------------------------ACGACATTTTA...2411.0011000
.......................................................................................................................................................................................................C-------ACCTATCGCCAGTTGCTGCTT-..............................................................................................................................................................................................................................................................................................2211.0010010
dm3
TTAA-----ATGTTAT--------CCTACCATTTAACCACT----AAGCGTAT---GC-AAA------CCACTTG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACCTCGCGCCAGTTGCTGCTT-CCACATTCCACA-----TGCAT-CG-TTCGCGGCATTT-------------------TCTGCCCGAGTAGC-GTGAC--CC--------AGCACACACACACATCGCCTCCATCC----------------------------CAGCTTA-----TATTAATTTTGTGTATTT---------TATCATCA-TAGATGAGAAGCAA---AACTCATGCG--ATCAT---A-GTTAAGATT---------------------------------ATGACATTTTAAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................TGCAT-CG-TTCGCGGCATTT-------------------TCTGCC...............................................................................................................................................................................................................................25112.001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012
..........................................................................................................................................................................................................................................................................T-------------------TCTGCCCGAGTAGC-GTGAC--CC--------AGCACA...............................................................................................................................................................................................2818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011500000
...............................................................................................................................................................................................................................................................TTCGCGGCATTT-------------------TCTGCCCGAGTAGC-GT....................................................................................................................................................................................................................2816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
......................................................................................................................................................................................................................................CACATTCCACA-----TGCAT-CG-TTCGCGGC............................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000
................................................................................................................................................................................................................................................................................................TGCCCGAGTAGC-GTGAC--CC--------AGCACA...............................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..............................................................................................................................................................................................................................................................................................................................................GCCTCCATCC----------------------------CAGCTTA-----TATTAA.............................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TGCTT-CCACATTCCACA-----TGCAT-CG-TT..................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000
..............................................AGCGTAT---GC-AAA------CCACTTG------------------------------------------------AAC.....................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAT---A-GTTAAGATT---------------------------------ATGA..........1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCG--ATCAT---A-GTTAAGATT---------------------------------ATGACA........2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................ATTCCACA-----TGCAT-CG-TTCGCGGC............................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000
.......................................................................................................................................................................................................................................................................................................GTAGC-GTGAC--CC--------AGCACAC..............................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................T-CCACATTCCACA-----TGCAT-CG-TTCGCGGC............................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................CCACA-----TGCAT-CG-TTCGCGGC............................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000
................................................................................................................................................................................................................................GCTT-CCACATTCCACA-----TGCAT-CG-TT..................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CACACACATCGCCTCCATCC----------------------------CAGCTTA-----...................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
............................................................................................................................................................................................................................TGCTGCTT-CCACATTCCAC...................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GTAGC-GTGAC--CC--------AGCACACACACA.........................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................CTGCCCGAGTAGC-GTGAC--CC--------AGCACA...............................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTAATTTTGTGTATTT---------TATCATCA-TAGA...........................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................................................................................................................................................................................................................................................................................................................................................................ATCA-TAGATGAGAAGCAA---AACTCATGCG--A.................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GCTGCTT-CCACATTCCACA-----.............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................ACATTCCACA-----TGCAT-CG-TTCG................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................CGCGCCAGTTGCTGCTT-CCAC..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AAA------CCACTTG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
droEre2
TTAA-----ATGTTAT--------GCTACCATTTAACTACT----AGGCGTAT---GC-A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATCGCCGGTTACTGCTT-CCACATTCCACG-----AGCAT-CG-TTCGCGGCAT---------------------TCTGCCCAAGGAGACATTCTACCC--------AA--CCAACACACAACCCCTCCATCC----------------------------CAGCTTA-----TATTAATTCTGTGTATTT---------TCTCATCC-TAGATGAGAAGCAA---AACTCATGCG--ATCAT---A-GTTAAGTTT---------------------------------ACAGCATTTTAAATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................T-CCACATTCCACG-----AGCAT-CG-TTCGCG..............................................................................................................................................................................................................................................................26138.003800000038
...........................................................A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GT.................................................................................................................................................................................................................................................................................................................................2216.0061000500
........................................................GC-A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GT.................................................................................................................................................................................................................................................................................................................................2416.0061000410
...................................................AT---GC-A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------...................................................................................................................................................................................................................................................................................................................................2413.0030000300
.................................................GTAT---GC-A-A------CCAGTCG------------------------------------------------AACGTT--T...............................................................................................................................................................................................................................................................................................................................................................................................2213.0031000200
.............TAT--------GCTACCATTTAACTACT----AGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020100010
....................................................................................................................................G---------------------------AT-------------A----------------GTTCTGGC-------ACTTATCGCC..........................................................................................................................................................................................................................................................................................................2212.0022000000
...................................................AT---GC-A-A------CCAGTCG------------------------------------------------AACGTT--T...............................................................................................................................................................................................................................................................................................................................................................................................2012.0020000200
........................................................................................................................................................................................................................................................................................................................................................................................TTA-----TATTAATTCTGTGTATTT---------TCT.....................................................................................................2412.0022000000
..................................AACTACT----AGGCGTAT---GC-A-A------CCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000
...........................................................................................................................................................................................................................................TCCACG-----AGCAT-CG-TTCGCGGCA...........................................................................................................................................................................................................................................................2211.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................AGCTTA-----TATTAATTCTGTGTATTT---------TCT.....................................................................................................2711.0010100000
......................................................................AGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GT.................................................................................................................................................................................................................................................................................................................................1811.0010000100
..............AT--------GCTACCATTTAACTACT----AGGCGTAT---...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
....................................CTACT----AGGCGTAT---GC-A-A------CCAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..............AT--------GCTACCATTTAACTACT----AGGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
............................................................................................................................ACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------....................................................................................................................................................................................................................................................................................................................1811.0010100000
.........................................................C-A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GT.................................................................................................................................................................................................................................................................................................................................2311.0010010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT---A-GTTAAGTTT---------------------------------ACAGC.........1811.0010000010
...........................................................A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCT..............................................................................................................................................................................................................................................................................................................................2511.0010001000
...............................TTTAACTACT----AGGCGTAT---GC-A-A------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA---AACTCATGCG--ATCAT---A-GTTAAGT.................................................2811.0010000100
.............TAT--------GCTACCATTTAACTACT----AGGCGTAT---...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000010
.................................................................................................................................................................................................................................................................CGCGGCAT---------------------TCTGCCCAAGGAGACA.....................................................................................................................................................................................................................2411.0011000000
..................................................................................................................................................................................................................................TT-CCACATTCCACG-----AGCAT-CG-TTCGCG..............................................................................................................................................................................................................................................................2711.0011000000
..............AT--------GCTACCATTTAACTACT----AGGCGTAT---G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
....................................CTACT----AGGCGTAT---GC-A-A------CCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.................................................GTAT---GC-A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------...................................................................................................................................................................................................................................................................................................................................2611.0011000000
......................................................................AGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------....................................................................................................................................................................................................................................................................................................................2411.0010000010
.....................................................................................................................................................................................................................................................................................................................C--------AA--CCAACACACAACCCCTCCAC.............................................................................................................................................................................2311.0010100000
............................CCATTTAACTACT----AGGCGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
................................TTAACTACT----AGGCGTAT---GC-A-A------CC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.........................................................C-A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------...................................................................................................................................................................................................................................................................................................................................2111.0010000100
..................................AACTACT----AGGCGTAT---GC-A-A------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
...................................................AT---GC-A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTT................................................................................................................................................................................................................................................................................................................................2711.0011000000
........................................................................................................................................................................................................................................CATTCCACG-----AGCAT-CG-TTCGCGGC............................................................................................................................................................................................................................................................2411.0010100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAT---A-GTTAAGTTT---------------------------------ACAGC.........2011.0010001000
..................................AACTACT----AGGCGTAT---GC-A-A------CCAGTCG------------------------------------------------AAC.....................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
.............................................AGGCGTAT---GC-A-A------CCAGTCG------------------------------------------------AAC.....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
................................TTAACTACT----AGGCGTAT---GC-A-A------CCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
........................................................GC-A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------...................................................................................................................................................................................................................................................................................................................................2211.0010000010
...........GTTAT--------GCTACCATTTAACTACT----AGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
..................................................................................................................................................................................................TCTGGC-------ACTTATCGCCGGTTACTGCT................................................................................................................................................................................................................................................................................................2611.0011000000
..........................................................................................................................................................................................................................................................................................................GACATTCTACCC--------AA--CCAAC............................................................................................................................................................................................1911.0010000010
...........................................................A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTC...............................................................................................................................................................................................................................................................................................................................2411.0010100000
........................................................GC-A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTT................................................................................................................................................................................................................................................................................................................................2511.0010000010
.........................................................C-A-A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GC.................................................................................................................................................................................................................................................................................................................................2311.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---A-GTTAAGTTT---------------------------------ACAGCATTTT....2211.0010000010
droYak3
TTAA-----ATGTTAT--------GCTACCATTTAACTACT----AGGCGTAT---GC-AAA------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------AGTTGTCGCCAGTTACTGCTT-CCACATTCCACG-----AGCAT-CG-TTCAAGGCAT---------------------CCTGCCCGAGGAGC-GTGAC--CC--------AA--CACACATACTACGCCTCTATCC----------------------------CAGCTTA-----TATTAACTTTGTGTATTT---------TATCATCC-TAGATGAGAAGAAA---AACTCATGCG--ATCAT---A-GTTAAGTTT---------------------------------ACAACATTTTAAATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................AT---GC-AAA------CCAGTCG------------------------------------------------AACGTT--T...............................................................................................................................................................................................................................................................................................................................................................................................2115.00500000050000
.................................................GTAT---GC-AAA------CCAGTCG------------------------------------------------AAC.....................................................................................................................................................................................................................................................................................................................................................................................................1914.00422000000000
.................................................GTAT---GC-AAA------CCAGTCG------------------------------------------------AACGT...................................................................................................................................................................................................................................................................................................................................................................................................2114.00400000040000
...................................................AT---GC-AAA------CCAGTCG------------------------------------------------AACGTT--................................................................................................................................................................................................................................................................................................................................................................................................2013.00301000020000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAA---AACTCATGCG--ATCAT---A-GTTAAGT.................................................2813.00300000030000
...................................................AT---GC-AAA------CCAGTCG------------------------------------------------AACGT...................................................................................................................................................................................................................................................................................................................................................................................................1913.00300000030000
..........TGTTAT--------GCTACCATTTAACTACT----AGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00202000000000
..........................................................................................................................................................................................................................GTTACTGCTT-CCACATTCCACG-----AGC..........................................................................................................................................................................................................................................................................2512.00202000000000
.....................................TACT----AGGCGTAT---GC-AAA------CCAGTCG------------------------------------------------AAC.....................................................................................................................................................................................................................................................................................................................................................................................................2712.00211000000000
.............................................................A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------...................................................................................................................................................................................................................................................................................................................................1912.00201000010000
...............................................................................................................................................................................................................................................................................................................GAC--CC--------AA--CACACATACTACGC...................................................................................................................................................................................2112.00202000000000
......................................................................................................................................................................................................................................................................CAT---------------------CCTGCCCGAGGAGC-GT....................................................................................................................................................................................................................1912.00202000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---AACTCATGCG--ATCAT---A-GTTAAGT.................................................2512.00200200000000
..............AT--------GCTACCATTTAACTACT----AGGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000020000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GAAA---AACTCATGCG--ATCAT---A-GTTAAGT.................................................2712.00200000020000
..............................................................................................................................GTT--TG---------------------------AT-------------A----------------GTTCTGGC-------AGTTGTCGCC..........................................................................................................................................................................................................................................................................................................2612.00202000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAA---AACTCATGCG--ATC...............................................................2012.00201100000000
...................................................................................................................................TG---------------------------AT-------------A----------------GTTCTGGC-------AGTTGTCGC...........................................................................................................................................................................................................................................................................................................2212.00200000020000
...A-----ATGTTAT--------GCTACCATTTAACTACT----AGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00202000000000
.............................................................................................................................................................................................................................................................G-TTCAAGGCAT---------------------CCTGCCCGAGGAGC-......................................................................................................................................................................................................................2512.00202000000000
................................................CGTAT---GC-AAA------CCAGTCG------------------------------------------------AAC.....................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000000000
............................................................................................................................................................................................................................................CCACG-----AGCAT-CG-TTCAAGG.............................................................................................................................................................................................................................................................1912.00201000010000
.............................................................................................................................................................................................................................................................G-TTCAAGGCAT---------------------CCTGCCCGAGGAGC-GT....................................................................................................................................................................................................................2712.00201000010000
.................................................................................................................................................................T-------------A----------------GTTCTGGC-------AGTTGTCGCC..........................................................................................................................................................................................................................................................................................................2011.00101000000000
..................................AACTACT----AGGCGTAT---GC-AAA------CCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCATGCG--ATCAT---A-GTTAAGT.................................................2211.00101000000000
....................................................................................................................................G---------------------------AT-------------A----------------GTTCTGGC-------AGTTGTCGC...........................................................................................................................................................................................................................................................................................................2111.00100000010000
.....................................................................................................................................................................................................................................................................................................GAGGAGC-GTGAC--CC--------AA--CACACA...........................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................................................................................................................................................................................................ACATACTACGCCTCTATCC----------------------------CAG............................................................................................................................................2211.00101000000000
.............................................AGGCGTAT---GC-AAA------CCAGTCG------------------------------------------------AACGTT--................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
............................................................AA------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------...................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCG--ATCAT---A-GTTAAGTTT---------------------------------ACAACA........2511.00101000000000
..........................................................................G------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------AGT.................................................................................................................................................................................................................................................................................................................2311.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAA---AACTCATGCG--ATCAT---A-GT......................................................2311.00100000010000
..........................TACCATTTAACTACT----AGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATCC-TAGATGAGAAGAAA---AACT..........................................................................2211.00101000000000
...............................................................................................................................................................................................................................................................TTCAAGGCAT---------------------CCTGCCCGAGGA.........................................................................................................................................................................................................................2211.00101000000000
.......................................................................................................................................................................................................................................................GCAT-CG-TTCAAGGCAT---------------------CCTGCCC..............................................................................................................................................................................................................................2311.00101000000000
.......................................................................................................................................................................................................................................................................................................................................ATACTACGCCTCTATCC----------------------------CAGC...........................................................................................................................................2111.00100000010000
..................................................................................................................................................................................................................................................................................................................................CACACATACTACGCCTCTATCC----------------------------CAGCTT.........................................................................................................................................2811.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGAAA---AACTCATGCG--ATCAT---A-........................................................2511.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGAAA---AACTCATGCG--AT................................................................2111.00100100000000
................................................................................................................................................................................................................................GCTT-CCACATTCCACG-----AGCAT-C......................................................................................................................................................................................................................................................................2211.00100000010000
................................................................................................................................................................................................................GTTGTCGCCAGTTACTGCTT-C.............................................................................................................................................................................................................................................................................................2111.00110000000000
....................................................................................................................................................................................................................................................................GGCAT---------------------CCTGCCCGAGGAGC-G.....................................................................................................................................................................................................................2011.00101000000000
....................................................T---GC-AAA------CCAGTCG------------------------------------------------AACGTT--................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGCG--ATCAT---A-GTTAAGTTT---------------------------------ACAAC.........2811.00100000010000
..................................AACTACT----AGGCGTAT---GC-AAA------CC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.................................................................................................................................................................................................................................................................CAAGGCAT---------------------CCTGCCCGAGGAGC-GTG...................................................................................................................................................................................................................2511.00100000010000
.............................................................................................................................................................................................................................................................G-TTCAAGGCAT---------------------CCTGCCCGAGGA.........................................................................................................................................................................................................................2311.00101000000000
........................................................................................................................................................................................................................................................................T---------------------CCTGCCCGAGGAGC-GTGAC--CC--------A....................................................................................................................................................................................................2311.00100100000000
........................................................................................................................................................................................................................CAGTTACTGCTT-CCACATTCCACG-----A............................................................................................................................................................................................................................................................................2511.00101000000000
.............................................AGGCGTAT---GC-AAA------CCAGTCG------------------------------------------------AAC.....................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000
....................................................................CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTT................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAA---AACTCATGCG--ATCAT---A-........................................................2111.00101000000000
....................................CTACT----AGGCGTAT---GC-AAA------CCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.................................................................................................................................................................................................................................................................CAAGGCAT---------------------CCTGCCCGAGGAGC-......................................................................................................................................................................................................................2211.00101000000000
............................................................................................................................................................................................................................................CCACG-----AGCAT-CG-TTCAAGGC............................................................................................................................................................................................................................................................2011.00101000000000
........................................................................................................................................................................................................................................................................T---------------------CCTGCCCGAGGAGC-GTGAC--C..............................................................................................................................................................................................................2111.00100100000000
................................................................................................................................................................................................................................................................TCAAGGCAT---------------------CCTGCCCGAGGAGC-GT....................................................................................................................................................................................................................2511.00100000010000
......................................................................AGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCT..............................................................................................................................................................................................................................................................................................................................2111.00100000010000
............................................................AA------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTT................................................................................................................................................................................................................................................................................................................................2311.00110000000000
......................................................................................................................................................................................................................................................AGCAT-CG-TTCAAGGCAT---------------------CC...................................................................................................................................................................................................................................1911.00101000000000
........................................................................................................................................................................................................................................................CAT-CG-TTCAAGGCAT---------------------CCTGCCCGAGGAGC-......................................................................................................................................................................................................................2911.00100100000000
........................................................................................................................................................................................................................................CATTCCACG-----AGCAT-CG-TTCAAGGC............................................................................................................................................................................................................................................................2411.00100000010000
................................................................................................................................................................................................................................GCTT-CCACATTCCACG-----AGC..........................................................................................................................................................................................................................................................................1911.00100010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGAAA---AACTCATGCG--ATC...............................................................2211.00100100000000
...........................................................................................................................................................................................................................................................................................................................................TACGCCTCTATCC----------------------------CAGCTT.........................................................................................................................................1911.00101000000000
...........................................................AAA------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------....................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...........................................................................................................................................................................................................................TTACTGCTT-CCACATTCCAC...................................................................................................................................................................................................................................................................................2011.00101000000000
................................................................................................................................................................................................................................................................TCAAGGCAT---------------------CCTGCCCGAGGAGC-G.....................................................................................................................................................................................................................2411.00101000000000
..................................................................................................................................................................................................................................TT-CCACATTCCACG-----AGCAT-CG-TT..................................................................................................................................................................................................................................................................2311.00101000000000
........................................................GC-AAA------CCAGTCG------------------------------------------------AACGTT--T...............................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.................................................................................................................................................................................................................................................................CAAGGCAT---------------------CCTGCCCGAGGAGC-GT....................................................................................................................................................................................................................2411.00100000010000
...............................................................................................................................................................................................................................TGCTT-CCACATTCCACG-----AGC..........................................................................................................................................................................................................................................................................2011.00101000000000
..............................................................................................................................GTT--TG---------------------------AT-------------A----------------GTTCTGGC-------AGTTGTCGC...........................................................................................................................................................................................................................................................................................................2511.00100100000000
.....................................................................CAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------....................................................................................................................................................................................................................................................................................................................2511.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAA---AACTCATGCG--ATCAT---..........................................................2111.00100000010000
................................................................................................................................................................................................................................GCTT-CCACATTCCACG-----AGCAT-CG-....................................................................................................................................................................................................................................................................2311.00101000000000
....................................................................................................................................G---------------------------AT-------------A----------------GTTCTGGC-------AGTTGTCGCC..........................................................................................................................................................................................................................................................................................................2211.00100100000000
................................TTAACTACT----AGGCGTAT---GC-AAA------CCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAA---AACTCATGCG--ATCAT---A-........................................................2211.00100000010000
.........................................................................................................................................................................................................................................ATTCCACG-----AGCAT-CG-TTCAAGGC............................................................................................................................................................................................................................................................2311.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAGTTT---------------------------------ACAACATTTTAA..2111.00101000000000
.......................................CT----AGGCGTAT---GC-AAA------CCAGTCG------------------------------------------------AACGT...................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAA---AACTCATGCG--ATCAT---..........................................................2211.00101000000000
.........................................................................CG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------AGTT................................................................................................................................................................................................................................................................................................................2511.00100100000000
..............AT--------GCTACCATTTAACTACT----AGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---AACTCATGCG--ATCAT---A-GTT.....................................................2111.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................A---AACTCATGCG--ATCAT---A-GTTAAGT.................................................2411.00100000010000
.............................................................A------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCT..............................................................................................................................................................................................................................................................................................................................2411.00110000000000
.................................................GTAT---GC-AAA------CCAGTCG------------------------------------------------AACGTT--................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.........ATGTTAT--------GCTACCATTTAACTACT----AGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAA---AACTCATGCG--ATCAT---A-........................................................2311.00110000000000
.......................................................................................................................................................................................................................................ACATTCCACG-----AGCAT-CG-TT..................................................................................................................................................................................................................................................................1911.00101000000000
.................................................................................................................................................................T-------------A----------------GTTCTGGC-------AGTTGTCGCCAGTTAC....................................................................................................................................................................................................................................................................................................2611.00101000000000
..........................................................................................................................................................................................................................................TTCCACG-----AGCAT-CG-TTCAAGGC............................................................................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................TCC----------------------------CAGCTTA-----TATTAACTTTGTGTAT...................................................................................................................2611.00101000000000
..............................................................................................................................GTT--TG---------------------------AT-------------A----------------GTTCTGGC-------AGTT................................................................................................................................................................................................................................................................................................................2011.00101000000000
.......................................................................................................................................................................................................................................................................AT---------------------CCTGCCCGAGGAGC-GTGAC--CC--------AA--CA...............................................................................................................................................................................................2711.00100000010000
..........................................................................G------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------....................................................................................................................................................................................................................................................................................................................2011.00100100000000
...........GTTAT--------GCTACCATTTAACTACT----AGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
......................................................................................................................................................................................................GC-------AGTTGTCGCCAGTTACT...................................................................................................................................................................................................................................................................................................1911.00100010000000
............................................................................................................................ACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------AGTTGT..............................................................................................................................................................................................................................................................................................................2411.00100000010000
.......................................................................................................................................................................................................................................................................................................................................ATACTACGCCTCTATCC----------------------------CAGCT..........................................................................................................................................2211.00101000000000
.........................................................................................................................................................................................................................................................AT-CG-TTCAAGGCAT---------------------CCTGCC...............................................................................................................................................................................................................................2011.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTA-----TATTAACTTTGTGTAT...................................................................................................................1911.00101000000000
.........................................................................................................................................................................................................................AGTTACTGCTT-CCACATTCCACG-----AGCAT-C......................................................................................................................................................................................................................................................................2911.00100000010000
...................................................AT---GC-AAA------CCAGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------....................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCC-TAGATGAGAAGAAA---A.............................................................................2211.00100000010000
......................................................................AGTCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTC...............................................................................................................................................................................................................................................................................................................................2011.00101000000000
................................TTAACTACT----AGGCGTAT---GC-AAA------CCAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAA---AACTCATGCG--ATCAT---A-GT......................................................2411.00100000010000
.........................................................................................................................................................................................................................................................AT-CG-TTCAAGGCAT---------------------CCTGCCCGAGGA.........................................................................................................................................................................................................................2611.00101000000000
.............................................................................................................................................................................................................................................................G-TTCAAGGCAT---------------------CCTGCCCGAG...........................................................................................................................................................................................................................2111.00101000000000
...................................................................................................................................TG---------------------------AT-------------A----------------GTTCTGGC-------AGTTGTCGCC..........................................................................................................................................................................................................................................................................................................2311.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GTATTT---------TATCATCC-TAGATGA........................................................................................2111.00101000000000
.............................................................................................................................................................................................................................................................................................................GTGAC--CC--------AA--CACACATACTACGCCT.................................................................................................................................................................................2511.00101000000000
..........................................................................................................................................................................................................................GTTACTGCTT-CCACATTCCACG-----AGCAT-C......................................................................................................................................................................................................................................................................2811.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGCG--ATCAT---A-GTTAAG..................................................2011.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GAAA---AACTCATGCG--ATCAT---A-........................................................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAA---AACTCATGCG--ATCAT---A-GT......................................................2511.00101000000000
................................TTAACTACT----AGGCGTAT---GC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCG--ATCAT---A-GTTAAGTTT---------------------------------ACAAC.........2611.00101000000000
droEug1
TTAA-----ATGTTAT--------GCTACCATCTAACTACT----AGGCTTAT---GC-AAA------CCAATCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATCGCCAGCCGCTGCTT-CCACATTCCATG-----AGCAT-CG-TTCGAGGCAT---------------------CCGGGCCAAGTAG---TGAT--TT--------AA--CCCATATATTATGCCTCCATCC----------------------------CAGCTTA-----TATTTACTGTGTATATTT---------TATCATCT-TAGATGCAACGCGA---AACTCATGAG--TTCAT---A-GTTAAGTTT---------------------------------ACAACATTTAAAATSizeHit CountTotal NormTotal
No Reads
droBia1
TTAA-----ATGTTAT--------GCTACCAACTAACTACT----AGGCGTAT---GC-AAACCCAAACCAGTCG------------------------------------------------AACGTT--CG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATCGCCAGCCGCTGCTT-CCACATTCCACA---CGAGCAT-CG-TTCGAGGCAT---------------------CCGGCCCGAGGAGC-GTGAT--CC--------CA--TCCAC---CAATGCCTCCATCC----------------------------CAGTTTACTCTATATTAATTGTGTATATTT---------TATCATCC-TAGATGCGATGCGA---AACTCATGAG--ATCAT---A-GTTAAGTTT---------------------------------ACCACATTTCAAATSizeHit CountTotal NormTotal
No Reads
droTak1
TTAA-----ATGTTAT--------GCTACCATCTAACTACT----AGGCGTAT---GC-AAA------CCGATCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATGGCCAGCCGCTGCTT-CCACATTCCACG-----AGCAT-CG-TTCGAGGCAT---------------------CCGGCCCAAGGAGC-GTGAT--CC--------CA--CCCACATATTATGCCTCCATCC----------------------------CAGCTTA-----TATTAATCGTGTATATTT---------TATCATCT-TAGATGCGATGCGA---AACTCATGAT--ATCAT---A-GTTAAGTTT---------------------------------ACGACATTTCAAATSizeHit CountTotal NormTotal
No Reads
droEle1
TTAA-----ATGTTAT--------GCTACCATCTAACTACT----AGGCGTAT---GT-AAA------CCAACCAACC---------------------------------------GACGTGAACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATCGCCAGTCGCTGCTT-CCACATTCCACG-----AGCAT-CG-TTTGAGGCAT---------------------CCGGTCCCAGTAGC-GTAAT--CC--------AA--TCCACATATGAAGCCTCCTTCC----------------------------CAGCTTA-----TTTTAATTGTGTATATTT---------AATCATCC-TAGATGCATTGCGA---AACTCATGAG--CTCAT---A-GTTAAGTTT---------------------------------ACAACATTTCAAATSizeHit CountTotal NormTotal
No Reads
droRho1
TTAA-----ATGTTAT--------GCTACCATCTAACTACT----AGGCGTAT---GC-AAA------CCGACCG-------------------------------------------ACGTGAACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATCGCCAGTCGCCGCTT-CCACATTCCACC-----AGCAT-CG-TTTGAGGCAT---------------------CCTGCTCG-GAAGT-GTGAT--GC--------AA--CCGGCATA--ATGACTCCTTCC----------------------------CAGCTTA-----TTTTTATTGTGTACATTT---------AATCATCT-TGGATGCGATGCGA---AACTCATGAG--CTCAT---A-GTTAAGTTT---------------------------------ACAACATTTCAAATSizeHit CountTotal NormTotal
No Reads
droFic1
TTAA-----ATGTTAC--------GCTACCATCTAACTAAT----AGGCGTAT---GC-GAA------CCGACCG------------------------------------------------AACGTT--TG---------------------------AT-------------A----------------GTTCTGGC-------ACTTATCGCCAGCCGCTGCTT-CCACATTCCACG-----AGCAT-CG-CTCGAGGCAT---------------------CCGGCCCGAGGAGC-GTGAT--CT---------A--CCCACATATTATGCCTCTAACC----------------------------CAGTTTA-----TTTAAATTGTGTATATTT---------TATCAACT-TAAAAGCGATGCAAAAAAACTCATGTAT-ATCAT---A-GTTAAGTTT---------------------------------ATGACATTTCAAATSizeHit CountTotal NormTotal
No Reads
droKik1
TTAA-----ATGTTAT--------GCTACCATCTAATGACTACCCAGGCGCAT---GT-AAA------GCAACCA------------------------------------------------AACGTC--TG---------------------------AT-------AC----A----------------GATCT---------------------GCTGCTGCTT-CCACATTCCACGTCTTGGGCAT-CG-TCCGAGA--------------------------------TGAAGC-ATGAT--CC--------AG--------------GCTTC-AACT--------TAT-----------------CAGCTTA-----TGTTAACTTTGTATATGT---------TTGC-CCT-TAAAATCCAAGCAA---AACTCATGAA--ACCAT---AAGTTAAGTCG---------------------------------A-GACATTTCAAATSizeHit CountTotal NormTotal
No Reads
droAna3
TTAA-----ACGTTAT--------GCTACCATCTAACTATT----AGGCGTAT---GTCGAA------CCAACCA------------------------------------------------ATCGCTACCG-CTATCGGCC----------AACACTGTT---TAATATAGTTA----------------GTGCTGGCTGTAGTTAGTTTCCGCCAGCCGCTGCTT-CCACATTCCAAG-----GGCAAGCG-AC-TCCGGAG---------------------CCGGCTCGAGAAGC-GTGAT--C------------------------------CACCC----------------------------GAGTTTA-----TGTTAAATGTGTATATT----------GATCATCTATATATGGAAAG--------------------CAT---A-GT----------------------------------------------TTTGAATTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................GTT---TAATATAGTTA----------------GTGCTGGCTGT........................................................................................................................................................................................................................................................................................................................2514.004200020
............................................................................................................................................................................................................GTTAGTTTCCGCCAGCCGCTG..................................................................................................................................................................................................................................................................................................2112.002200000
...........................................................................................................................................................................................................AGTTAGTTTCCGCCAGCCGCTG..................................................................................................................................................................................................................................................................................................2212.002200000
..........................................................................A------------------------------------------------ATCGCTACCG-CTATCGGCC----------AACACT....................................................................................................................................................................................................................................................................................................................................................................2612.002200000
..........................................................................................................................................................................................................................................................AGCG-AC-TCCGGAG---------------------CCGGCTCGAGAAGC-......................................................................................................................................................................................................................2712.002100001
......................................................................AACCA------------------------------------------------ATCGCTACCG-CTATC........................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
...........................................................................................................................ATCGCTACCG-CTATCGGCC----------AACAC.....................................................................................................................................................................................................................................................................................................................................................................2412.002000002
...............................................................................................................................................................GTT---TAATATAGTTA----------------GTGCTGGCTGTA.......................................................................................................................................................................................................................................................................................................................2612.002010001
......................................................................................................................................................................AATATAGTTA----------------GTGCTGGCT..........................................................................................................................................................................................................................................................................................................................1911.001001000
.......................................................................................................................................................................................................................................ACATTCCAAG-----GGCAAGCG-AC-TCCGG............................................................................................................................................................................................................................................................2511.001100000
.........................................................................................................................................................................................................GTAGTTAGTTTCCGCCAGCCGCTGCT................................................................................................................................................................................................................................................................................................2611.001100000
..................................AACTATT----AGGCGTAT---GTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...........................................................................................................................ATCGCTACCG-CTATCGGCC----------AACA......................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.........................................................................................................................................................................................................GTAGTTAGTTTCCGCCAGCCGCT...................................................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................................................TT-CCACATTCCAAG-----GGCAAGCG-AC-TCC..............................................................................................................................................................................................................................................................2711.001010000
.........................................................................................................................................................................ATAGTTA----------------GTGCTGGCTGTA.......................................................................................................................................................................................................................................................................................................................1911.001100000
......................................ATT----AGGCGTAT---GTCGAA------CCAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
......................................................................................................................................................................................................................................................GGCAAGCG-AC-TCCGGAG---------------------CCGGCTCG.............................................................................................................................................................................................................................2511.001000010
.........................................................................................................................................................................................................................................................AAGCG-AC-TCCGGAG---------------------CCGGCTCG.............................................................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................AG-----GGCAAGCG-AC-TCCGGAG---------------------CCGGCT...............................................................................................................................................................................................................................2511.001000001
.....................................................................................................................................................................................................GGCTGTAGTTAGTTTCCGCCAGCC......................................................................................................................................................................................................................................................................................................2411.001010000
..........................................................................A------------------------------------------------ATCGCTACCG-CTATCGGCC----------AACACTGT..................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...............................................................................................................................................................GTT---TAATATAGTTA----------------GTGCTG.............................................................................................................................................................................................................................................................................................................................2011.001000001
............................................................................................................................................................................................................GTTAGTTTCCGCCAGCCGCT...................................................................................................................................................................................................................................................................................................2011.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................TT----------GATCATCTATATATGGAAAG--------------------CAT---A-G.......................................................2711.001100000
...............................................................................................................................................................GTT---TAATATAGTTA----------------GTGCTGG............................................................................................................................................................................................................................................................................................................................2111.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................GATCATCTATATATGGAAAG--------------------CAT---A-........................................................2411.001000010
................................CTAACTATT----AGGCGTAT---GTCGAA------CC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...........................................................................................................................ATCGCTACCG-CTATCGGCC----------AACACTGT..................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.............................................................................................................................................................................................................................GCTGCTT-CCACATTCCAAG-----GGC..........................................................................................................................................................................................................................................................................2211.001100000
..........................................................................A------------------------------------------------ATCGCTACCG-CTATCGGCC----------AACACC....................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...................................ACTATT----AGGCGTAT---GTCGAA------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................................................................................AAGCG-AC-TCCGGAG---------------------CCGGCTCGAGAAGC-......................................................................................................................................................................................................................2811.001100000
.TAA-----ACGTTAT--------GCTACCATCTAACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...................................................................................................................................................................................................................................................................................................TCGAGAAGC-GTGAT--C------------------------------CACTA----------------------------...............................................................................................................................................2011.001000010
..........................................................................................................................................................................................................................................................AGCG-AC-TCCGGAG---------------------CCGGCT...............................................................................................................................................................................................................................1911.001000001
..........................................................................A------------------------------------------------ATCGCTACCG-CTATCGGCC----------AAC.......................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..............................................................................................................................................................................................................................CTGCTT-CCACATTCCAAG-----GGCAA........................................................................................................................................................................................................................................................................2311.001000010
...............................................................................................................................................................................................................................................AG-----GGCAAGCG-AC-TCCGGAG---------------------CCGGC................................................................................................................................................................................................................................2411.001001000
......................................................................................................................................................................................................GCTGTAGTTAGTTTCCGCCAGCCGCTG..................................................................................................................................................................................................................................................................................................2711.001100000
.............................................................................................................................................................................................................TTAGTTTCCGCCAGCCGCTG..................................................................................................................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................GTT---TAATATAGTTA----------------GTGCTGGC...........................................................................................................................................................................................................................................................................................................................2211.001000010
..................................................................................................................................................................................................................TTCCGCCAGCCGCTGCTT-CCAC..........................................................................................................................................................................................................................................................................................2211.001100000
......................................................................................................................................................................................................................................................GGCAAGCG-AC-TCCGGAG---------------------CCGGCT...............................................................................................................................................................................................................................2311.001000010
...........................................................GAA------CCAACCA------------------------------------------------ATCGCTACCG-CTATC........................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................ATATT----------GATCATCTATATATGGAAAG--------------------C...............................................................2611.001000010
...........................................................................................................................................................................................................................................................GCG-AC-TCCGGAG---------------------CCGGCTCGAGAAGC-......................................................................................................................................................................................................................2611.001000001
......................................ATT----AGGCGTAT---GTCGAA------CC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
......................................ATT----AGGCGTAT---GTCGAA------CCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
....................................................................................................................................G-CTATCGGCC----------AACACTGTT---TAATATAGT.....................................................................................................................................................................................................................................................................................................................................................2811.001100000
.....................................TATT----AGGCGTAT---GTCGAA------CCAACCA------------------------------------------------AT......................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.............................................................................................................................................................CTGTT---TAATATAGTTA----------------GTGCTGGCTGTA.......................................................................................................................................................................................................................................................................................................................2811.001000010
............TTAT--------GCTACCATCTAACTATT----AGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......................................................................................................................................................................................................................................ACATTCCAAG-----GGCAAGCG-AC-TCC..............................................................................................................................................................................................................................................................2311.001100000
...................................................................................................................................CG-CTATCGGCC----------AACACTGC..................................................................................................................................................................................................................................................................................................................................................................1911.001010000
......................................................................................................................................................................................................GCTGTAGTTAGTTTCCGCCAGCCGCT...................................................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................................................GTAGTTAGTTTCCGCCAGCCGCTGC.................................................................................................................................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................................................GTAGTTAGTTTCCGCCAGCCGCTG..................................................................................................................................................................................................................................................................................................2411.001100000
....................................................................................................................................G-CTATCGGCC----------AACACTGTT---TA............................................................................................................................................................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................TGTAGTTAGTTTCCGCCAGC.......................................................................................................................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................................................................................TGCTT-CCACATTCCAAG-----GGC..........................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................................CGCTACCG-CTATCGGCC----------AAC.......................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................................................................................................................................................................................................................................................G-----GGCAAGCG-AC-TCCGGAG---------------------CCGGCT...............................................................................................................................................................................................................................2411.001100000
.................................................................................................................................................................................................................................CTT-CCACATTCCAAG-----GGCAAGCG-AC-TCC..............................................................................................................................................................................................................................................................2811.001010000
................................................................................................................................................................................................................................GCTT-CCACATTCCAAG-----GGC..........................................................................................................................................................................................................................................................................1911.001000001
.........................................................................................................................................................................................................................................ATTCCAAG-----GGCAAGCG-AC-TCCG.............................................................................................................................................................................................................................................................2211.001000010
.............................................................................................................................CGCTACCG-CTATCGGCC----------AACACT....................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..............................................GGCGTAT---GTCGAA------CCAACCA------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
............................................................................................................................TCGCTACCG-CTATCGGCC----------AACACA....................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.........................................................................................................................................................................................................................................................AAGCG-AC-TCCGGAG---------------------CCGGCT...............................................................................................................................................................................................................................2011.001000010
droBip1
TTAA-----ACGTTAT--------GCTACCT----ACTATT----AGGCGCT-------------------ATCG--------------------------------------------------C---------TATCGGCC----------ACCACTGTT-------------C----------------GTCCTGGCTATAGGTAGTTTCCGCCAGCCGCTGCTT-CCACATTCCAAG-----AGCAA-------GCGAC-T---------------------CCGGCTCGAGAAGC-GTGAT--C------------------------------CACCC----------------------------GAGTTTA-----TGTTAAATGTGTATATT----------GATCATCTATATA-------------------TGAA--AGCAT---A-GT----------------------------------------------TTTGAACTSizeHit CountTotal NormTotal
No Reads
dp5
TTAA-----ATGTTAT--------GCTATCATCTAAC---T----AAGCGTAT---GT-GAA------CTAATCA--------------------------------------------------C---------GATCTGCCAA------------TTG------------------------------------------------TTTGTCCCCAGCAGTTGCTT-CCACATTCCACA-----GGCAT-CCCTTCGAGA-AGCCGCTGCTTGGT---------CCTGGCTGGA-------GAT--GG--------AA--CCC-----------TTAAATCC----------------------------CA----------------------------------------CATC--TAAA--CGAATCGA---AAGTCATGAGTCATCGT---A-GTTAAGTT----------------------------------GAAACATTTGAAATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................AGCCGCTGCTTGGT---------CCTGGCTGGA-------....................................................................................................................................................................................................................2412.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCGA---AAGTCATGAGC...................................................................1812.0020110000000
...........................................................................................................................................TGCCAA------------TTG------------------------------------------------TTTGTCCCCAGC.......................................................................................................................................................................................................................................................................................................2112.0020200000000
...............................................................................................................................................................................................................................................................................CTTGGT---------CCTGGCTGGA-------GAT--GG--------.....................................................................................................................................................................................................2112.0020000002000
........................................................................................................................................................................................................................................................CAT-CCCTTCGAGA-AGCCGCTGCTTG................................................................................................................................................................................................................................................2512.0020200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATC--TAAA--CGAATCGA---AAGTCATGAGC...................................................................2611.0010010000000
.........................................................................................................................................................................................................................................................................CCGCTGCTTGGT---------CCTGGCTG.............................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................CTGGCTGGA-------GAT--GG--------AA--CCC-----------TTA................................................................................................................................................................................2211.0010010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATCGT---A-GTTAAGTT----------------------------------GA............1911.0010100000000
....................................................................................................................................................................................................................................................................GA-AGCCGCTGCTTGGT---------CCTGG................................................................................................................................................................................................................................2111.0010100000000
.........................................................T-GAA------CTAATCA--------------------------------------------------C---------GATCTGCC....................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................CTGGCTGGA-------GAT--GG--------AA--CC...............................................................................................................................................................................................1811.0010100000000
....................................................................................................................................................................................................................................................................................................................GG--------AA--CCC-----------TTAAATCC----------------------------CA----------------------------------------CATC--TAAA--.........................................................................................2511.0010100000000
................................................................................................................................................................................................................................................................................................................AT--GG--------AA--CCC-----------TTAAATCC----------------------------CA----------------------------------------C....................................................................................................2011.0010100000000
............................................................................................................................................................................................................................AGTTGCTT-CCACATTCCACA-----GGC..........................................................................................................................................................................................................................................................................2311.0010100000000
...............................................................................................................................................AA------------TTG------------------------------------------------TTTGTCCCCAGCA......................................................................................................................................................................................................................................................................................................1811.0010100000000
.............................................................................................................................C---------GATCTGCCAA------------TTG------------------------------------------------TTTGTCC............................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................AGCCGCTGCTTGGT---------CCTGG................................................................................................................................................................................................................................1911.0010100000000
........................................................................................................................................................................................................................................................CAT-CCCTTCGAGA-AGCCGCT.....................................................................................................................................................................................................................................................2011.0010100000000
..............AT--------GCTATCATCTAAC---T----AAGCGTAT---GT-G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.................................................................................................................................................................................................................................................................................................GGCTGGA-------GAT--GG--------AA--CCC-----------TTAAATCC----------------------------CA----------------------------------------.....................................................................................................2711.0010100000000
...............................................................................................................................................................................................................................TGCTT-CCACATTCCACA-----GGCA.........................................................................................................................................................................................................................................................................2111.0010100000000
...........GTTAT--------GCTATCATCTAAC---T----AAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
...............................................................................................................................................AA------------TTG------------------------------------------------TTTGTCCCCAGCAGTT...................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................AA------CTAATCA--------------------------------------------------C---------GATCTGCCA...................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................................................................................................................................................................................................................................................................AGA-AGCCGCTGCTTGGT---------CCT..................................................................................................................................................................................................................................2011.0010100000000
..............AT--------GCTATCATCTAAC---T----AAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................................TCGAGA-AGCCGCTGCTTGG...............................................................................................................................................................................................................................................1911.0010100000000
.........................CTATCATCTAAC---T----AAGCGTAT---GT-G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
................................................................................................................................................................................................................................................................TCGAGA-AGCCGCTGCTTGGT---------C....................................................................................................................................................................................................................................2111.0010100000000
..................................AAC---T----AAGCGTAT---GT-GAA------CTAATCA--------------------------------------------------C---------............................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
..........................TATCATCTAAC---T----AAGCGTAT---GT-GAC------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................................................GGT---------CCTGGCTGGA-------GAT--GG--------AA--C................................................................................................................................................................................................2111.0010001000000
.....................................................................................................................................................................................................................................................................A-AGCCGCTGCTTGGT---------CCTGGCTGGA-------G...................................................................................................................................................................................................................2611.0010100000000
...........................................................................................................................................................................................................................................................................GCTGCTTGGT---------CCTGGCTGGA-------....................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................GCTTGGT---------CCTGGCTGGA-------GAT--...............................................................................................................................................................................................................2011.0010010000000
..............................................AGCGTAT---GT-GAA------CTAATCA--------------------------------------------------C---------G...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
.....................................................................................................................................................................................................................................................................A-AGCCGCTGCTTGGT---------CCTGGC...............................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................TTCGAGA-AGCCGCTGCTTGGT---------CCTGGC...............................................................................................................................................................................................................................2711.0010100000000
............TTAT--------GCTATCATCTAAC---T----AAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGTCATCGT---A-GTTAAGTT----------------------------------..............2111.0010100000000
...................................................................................................................................................................................................................................T-CCACATTCCACA-----GGCAT-CCC....................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TC--TAAA--CGAATCGA---AAGTCATG......................................................................2211.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATC--TAAA--CGAATCGA---AAGTCATGAGTC..................................................................2711.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................C--TAAA--CGAATCGA---AAGTCATGA.....................................................................2211.0010100000000
................................CTAAC---T----AAGCGTAT---GT-GAA------CT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................ATCATCTAAC---T----AAGCGTAT---GT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................CGCTGCTTGGT---------CCTGGCTGG............................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................CTTGGT---------CCTGGCTGGA-------GAT--G..............................................................................................................................................................................................................2011.0010100000000
.......................................................................................................................................GATCTGCCAA------------TTG------------------------------------------------TTTGTCCCCAGCA......................................................................................................................................................................................................................................................................................................2611.0010100000000
..................................................................................................................................................................................................................................................................GAGA-AGCCGCTGCTTGGT---------CCT..................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................AGCCGCTGCTTGGT---------CCTGGCTGGA-------GAT--G..............................................................................................................................................................................................................2811.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................C--TAAA--CGAATCGA---AAGTCATGAGTCATC...............................................................2811.0010010000000
.................................................GTAT---GT-GAA------CTAATCA--------------------------------------------------C---------GATCTGCC....................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..............................................................................................................................................................................................................................................................................GCTTGGT---------CCTGGCTGGA-------G...................................................................................................................................................................................................................1811.0010100000000
.................................................................................................................................................................................................................................................................................TGGT---------CCTGGCTGGA-------GAT--GG--------A....................................................................................................................................................................................................2011.0010100000000
droPer2
TTAA-----ATGTTAT--------GCTATCATCTAAC---T----AAGCGTAT---GT-GAA------CTAATCA--------------------------------------------------C---------GATCTGCCAA------------TTG------------------------------------------------TTTGTCCCCAGCAGTTGCTT-CCACATTCCACA-----GGCAT-CCCTTCGAGA-AGCCGCTGCTTGGT---------CCTGGCTGGA-------GAT--GG--------AA--CCC-----------TTAACCCC----------------------------CA----------------------------------------CATC--TAAA--CGAATCGA---AAGTCATGAGTCATCGT---A-GTTAAGTT----------------------------------GAAACATTTGAAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................GAA------CTAATCA--------------------------------------------------C---------GATCTGCCAA------------TTG------------------------------------------------TTT................................................................................................................................................................................................................................................................................................................2715.005410000
...........................................................GAA------CTAATCA--------------------------------------------------C---------GATCTGCC....................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
.................................................................................................................................................................................................................................................................................................................................................................................................................................C--TAAA--CGAATCGA---AAGTCATGAGT...................................................................2411.001100000
..............................................................................................................................................................................................................................................................................GCTTGGT---------CCTGGCTGGA-------GAT--GG--------.....................................................................................................................................................................................................2211.001001000
...........................................................................................................................................................................................................................................................................GCTGCTTGGT---------CCTGGCTG.............................................................................................................................................................................................................................1811.001010000
..............................................................................................................................................................................................................................................................................GCTTGGT---------CCTGGCTGGA-------GAT--GG--------AA--CC...............................................................................................................................................................................................2611.001000010
...........................................................................................................................................TGCCAA------------TTG------------------------------------------------TTTGTCCCCAGC.......................................................................................................................................................................................................................................................................................................2111.001001000
.............................CATCTAAC---T----AAGCGTAT---GC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.......................................................................................................................................GATCTGCCAA------------TTG------------------------------------------------TTTGTCCCCAGCA......................................................................................................................................................................................................................................................................................................2611.001010000
..............................................................................................................................................................TG------------------------------------------------TTTGTCCCCAGCAGTTGCT................................................................................................................................................................................................................................................................................................2111.001010000
......................................................................AATCA--------------------------------------------------C---------GATCTGCCAA------------TTG------------------------------------------------...................................................................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................................................................................................................AT-CCCTTCGAGA-AGCCGCTGCTTG................................................................................................................................................................................................................................................2411.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATC--TAAA--CGAATCGA---AAGTCATGAGC...................................................................2611.001100000
...........................................................GAA------CTAATCA--------------------------------------------------C---------GATCTGCCAA------------T.....................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.....................................................................TAATCA--------------------------------------------------C---------GATCTGCCAA------------TTG------------------------------------------------TTTGTCC............................................................................................................................................................................................................................................................................................................2711.001010000
............................................................AA------CTAATCA--------------------------------------------------C---------GATCTGCCA...................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...................................................................................................................................................................................................................................................................................GT---------CCTGGCTGGA-------GAT--GG--------AA--CC...............................................................................................................................................................................................2111.001001000
...........................................................................................................................................................................................................................................................................GCTGCTTGGT---------CCTGGCTGGA-------....................................................................................................................................................................................................................2011.001100000
droWil2
TTAT-----ATGTTAATCATATTTCCTACCACCTAAACA---------------------AA------AAAATCA--------------------------------------------------CATT--TG--------TAAATATTGTACATCTTCGCTCTTCTACAAAAACAAAAATGGTGCAAGGGGAAGCACACT-----------------AAAACTGCATCCCACATTCCATT-----G-CAC-CCATTTAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----TATACATTTTTTAAATTTTAGCCATTTCCT---CA-TGAGTTGAGTTTGG---AACTCATTTT--C--GC---A-GAC----AC---------------------------------ATCAAATGTTAAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................TTAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----...................................................................................................................................2014.00400310
............................................................................................................................................................................AACAAAAATGGTGCAAGGGGAA.................................................................................................................................................................................................................................................................................................................................2214.00400310
..............................................................................................................................................................................CAAAAATGGTGCAAGGGGAA.................................................................................................................................................................................................................................................................................................................................2014.00400310
..............................................................................................................................................................................................................................................................ATTTAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------.........................................................................................................................................2113.00300210
...........................................................................................................................................................................AAACAAAAATGGTGCAAGGGGAA.................................................................................................................................................................................................................................................................................................................................2313.00300210
.................................................................................................................................................................................................................................................................TAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----...................................................................................................................................1913.00301200
...............................................................................................................................................................................AAAAATGGTGCAAGGGGAA.................................................................................................................................................................................................................................................................................................................................1913.00300210
................................................................................................................................................................................................................................................................TTAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----T..................................................................................................................................2112.00200200
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTT--C--GC---A-GAC----AC---------------------------------ATCAAATGT.....2412.00220000
..................................................................................................................................................ATTGTACATCTTCGCTCTT..............................................................................................................................................................................................................................................................................................................................................................1912.00200020
..................................................................................................................................................................................AATGGTGCAAGGGGAAGCA..............................................................................................................................................................................................................................................................................................................................1912.00200101
................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---AACTCATTTT--C--GC---A-GAC----AC---------------------------------..............2112.00202000
........................................................................................................................................................................................GCAAGGGGAAGCACACT-----------------AAAACTGC.................................................................................................................................................................................................................................................................................................2512.00201100
..................................................................................................................................................................................................................................................................AAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----T..................................................................................................................................1912.00201100
...........................................................................................................................................................................AAACAAAAATGGTGCAAGGGGAAGCA..............................................................................................................................................................................................................................................................................................................................2612.00200200
..................................................................................................................................................................................................................................................................AAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----TATACATTTT.........................................................................................................................2812.00200200
.............................................................................................................................................................................ACAAAAATGGTGCAAGGGGAA.................................................................................................................................................................................................................................................................................................................................2112.00200110
................................................................................................................................................................................................................................................................TTAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------.........................................................................................................................................1912.00200200
..............................................................................................................................................................................................................................................................ATTTAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----T..................................................................................................................................2312.00200200
................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGCCATTTCCT---CA-TGAGT..........................................................................................2111.00100100
.................................................................................................................................................................................................................................................................TAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----TATACATTTT.........................................................................................................................2911.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---AACTCATTTT--C--GC---A-GAC----.................................................1911.00101000
................................................................................................................................................................................................................................GCATCCCACATTCCATT-----G-CAC-CCAT...................................................................................................................................................................................................................................................................2511.00101000
.................................................................................................................................................TATTGTACATCTTCGCTCTT..............................................................................................................................................................................................................................................................................................................................................................2011.00101000
...........................................................................................................................................................................AAACAAAAATGGTGCAAGGGGAG.................................................................................................................................................................................................................................................................................................................................2311.00100100
..................................................................................................................................................................CTTCTACAAAAACAAAAATGGTG..........................................................................................................................................................................................................................................................................................................................................2311.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCCATTTCCT---CA-TGAGTTGAGT.....................................................................................2511.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGCCATTTCCT---CA-TGAGTTG........................................................................................2311.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---AACTCATTTT--C--GC---A-GAC----AC---------------------------------ATCAAAT.......2811.00101000
.................................................................................................................................................................................AAATGGTGCAAGGGGAAGC...............................................................................................................................................................................................................................................................................................................................1911.00100010
..................................................................................................................................................................................AATGGTGCAAGGGGAAGCAC.............................................................................................................................................................................................................................................................................................................................2011.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGG---AACTCATTTT--C--GC---A-GA......................................................2211.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTT--C--GC---A-GAC----AC---------------------------------ATCAAAT.......2211.00100001
.................................................................................................................................................................................................................................................................TAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----TATACAT............................................................................................................................2611.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATTTT--C--GC---A-GAC----AC---------------------------------ATCAAAT.......2411.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG---AACTCATTTT--C--GC---A-GA......................................................2011.00100010
........................................................................................................................................................................................GCAAGGGGAAGCACACT-----------------AAAA.....................................................................................................................................................................................................................................................................................................2111.00100100
................................................................................................................................................................................AAAATGGTGCAAGGGGAAGCA..............................................................................................................................................................................................................................................................................................................................2111.00100100
...........................................................................................................................................................................AAACAAAAATGGTGCAAGGG....................................................................................................................................................................................................................................................................................................................................2011.00100100
................................................................................................................................................................................AAAATGGTGCAAGGGGAAG................................................................................................................................................................................................................................................................................................................................1911.00101000
.............................................................................................................................................................................ACAAAAATGGTGCAAGGGGAAG................................................................................................................................................................................................................................................................................................................................2211.00100100
..............................................................................................................................................................................................................................................................ATTTAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----...................................................................................................................................2211.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGG---AACTCATTTT--C--GC---A-........................................................1911.00100100
.....................................................................................................................................................................................................................................CCACATTCCATT-----G-CAC-CCATTTAAAA-GA-----------------------------------------------------------------GA.......................................................................................................................................................................................3011.00100100
................................................................................................................................................................................................................................................................TTAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----TATACAT............................................................................................................................2711.00100100
.....................................................................................................................................................................................GGTGCAAGGGGAAGCACACT-----------------AAAACTGC.................................................................................................................................................................................................................................................................................................2811.00100010
.................................................................................................................................................................................AAATGGTGCAAGGGGAAG................................................................................................................................................................................................................................................................................................................................1811.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT--C--GC---A-GAC----AC---------------------------------ATCAAAT.......1911.00101000
..........................................................................................................................................................................................AAGGGGAAGCACACT-----------------AAAACTG..................................................................................................................................................................................................................................................................................................2211.00100100
.....................................................................................................................................................................CTACAAAAACAAAAATGGTGCAAGGGGAA.................................................................................................................................................................................................................................................................................................................................2911.00100100
..................................................................................................................................................................................................GCACACT-----------------AAAACTGCATCCC............................................................................................................................................................................................................................................................................................2011.00101000
....................................................................................................................................................................TCTACAAAAACAAAAATGGTGCAAGGG....................................................................................................................................................................................................................................................................................................................................2711.00101000
..................................................................................................................................................................................................................................ATCCCACATTCCATT-----G-CAC-CCAT...................................................................................................................................................................................................................................................................2311.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCCT---CA-TGAGTTGAGTTTGG---AACT..........................................................................2711.00100100
..........................................................................................................................................................................................................................................................C-CCATTTAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----T..................................................................................................................................2611.00100100
.......................................................................................................................................................................ACAAAAACAAAAATGGTGCAAGGGGAA.................................................................................................................................................................................................................................................................................................................................2711.00100100
..................................................................................................................................................................CTTCTACAAAAACAAAAATGGT...........................................................................................................................................................................................................................................................................................................................................2211.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTTGG---AACTCATTTT--C--GC---A-GAC----A................................................2711.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTAAATTTTAGCCATTTCCT---..................................................................................................2111.00101000
...............................................................................................................................................................................................................................................................TTTAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------.........................................................................................................................................2011.00100100
.......................................................................................................................................................................................................................................ACATTCCATT-----G-CAC-CCATTTAAAA-GA-----------------------------------------------------------------.........................................................................................................................................................................................2611.00100010
..................................................................................................................................................................................................................................ATCCCACATTCCATT-----G-CAC-CC.....................................................................................................................................................................................................................................................................2111.00100010
..............................................................................................................................................................................CAAAAATGGTGCAAGGGGA..................................................................................................................................................................................................................................................................................................................................1911.00100100
..........................................................................................................................................................................AAAACAAAAATGGTGCAAGGGGAAGCA..............................................................................................................................................................................................................................................................................................................................2711.00100100
................................................................................................................................................................................AAAATGGTGCAAGGGGAAGCACA............................................................................................................................................................................................................................................................................................................................2311.00100100
................................................................................................................................................................................................................................................T-----G-CAC-CCATTTAAAA-GA-----------------------------------------------------------------GA.......................................................................................................................................................................................1911.00100100
.....................................................................................................................................................................................................................................................................A-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----TATACATTT..........................................................................................................................2411.00100001
.....................................................................................................................................................................................................................................................................A-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----TATAC..............................................................................................................................2011.00101000
..............................................................................................................................................AAATATTGTACATCTTCGCT.................................................................................................................................................................................................................................................................................................................................................................2011.00101000
............................................................................................................................................................................................................................................................................................................................................GCTGCTGAG-------------------------------------A-----TATACATTTT.........................................................................................................................2011.00100010
..................................................................................................................................................................................................GCACACT-----------------AAAACTGCATCCCACATTC......................................................................................................................................................................................................................................................................................2611.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGG---AACTCATTTT--C--GC---..........................................................1911.00101000
........................................................................................................................................................................................GCAAGGGGAAGCACACT-----------------AAAACT...................................................................................................................................................................................................................................................................................................2311.00100100
.................................................................................................................................................................................................................................................................TAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----T..................................................................................................................................2011.00100100
..................................................................................................................................................................................AATGGTGCAAGGGGAAGCACACT-----------------AAAAC....................................................................................................................................................................................................................................................................................................2811.00100100
..............................................................................................................................................................................CAAAAATGGTGCAAGGGGAAG................................................................................................................................................................................................................................................................................................................................2111.00100100
.............................................................................................................................................................................................................................................................CATTTAAAA-GA-----------------------------------------------------------------GAGCTGCTGAG-------------------------------------A-----TATA...............................................................................................................................2711.00101000
........................................................................................................................................................CATCTTCGCTCTTCTACAA........................................................................................................................................................................................................................................................................................................................................................1911.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTGAGTTTGG---AACT..........................................................................1820.50100010
................................................................................................................................................................................AAAATGGTGCAAGGGGAA.................................................................................................................................................................................................................................................................................................................................1820.50100100
droVir3
TTAA-----ATGTTAT--------GAAAACC-TTAACAATT----AAGCCTACTCTGT-AACA-----CCAATCCACTCCACTCCACTCCACTCTCCGCCCCCCTTTCCAGTTCACTTCCGCACACCTC--TG---------------------------AT-------------G---------C------GCGCCGGC-------ACA----GGCTGTGGCAGCTG-CCACATTCCAAG-----TCAAG-CC-TAAGCAGCT------GCACGCACTGTGCTGGCCGACTCGAAGAG--GTGGC---A--------AA--TCCATAGAAAACA-------CCCATTTAATTATAAATGTTTATTTATATA-------------------T--ATATGATT---------T-----------GTAATTTGTAT---AAAGCATGCT---TAATGGAT-TTGAAAATG---------------------------------TATTCGTTGTATATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................GCTGGCCGACTCGAAGAG--GT....................................................................................................................................................................................................................2017.007003101000001001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CGAAGAG--GTGGC---A--------AA--TCCATAGAAA.......................................................................................................................................................................................2515.005000000000000000000110000000000000300000000000000000000000000000
......................................ATT----AAGCCTACTCTGT-AACA-----CC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.004201000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................GCTGGCCGACTCGAAGAG--GTGGC---..............................................................................................................................................................................................................2313.003001000000000000000000000000000000000000000000000000000000001010
..............................................................................................................................CTC--TG---------------------------AT-------------G---------C------GCGCCGGC-------ACA----.............................................................................................................................................................................................................................................................................................................2012.002001000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GTAT---AAAGCATGCT---TAATG............................................................1912.002000000000000000002000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT-TTGAAAATG---------------------------------TATTCGTTGT....2212.002001000000000000000000000000000000000000000000000000000000000100
...........................................................................................CTCTCCGCCCCCCTTTCCAGTTCACTTC............................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TG-CCACATTCCAAG-----TCAAG-CC-TAAGCAG.............................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AT-------------G---------C------GCGCCGGC-------ACA----GGCTGTGGCAGC.................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................CCATAGAAAACA-------CCCATTTAAT...................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................GACTCGAAGAG--GTGGC---A--------AA--TCCA.............................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................GCTGGCCGACTCGAAGAG--GTGGC---A--------.....................................................................................................................................................................................................2411.001000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAT---AAAGCATGCT---TAATGG...........................................................2211.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CGAAGAG--GTGGC---A--------AA--TCCATA...........................................................................................................................................................................................2111.001000000000010000000000000000000000000000000000000000000000000000
.................................................CTACTCTGT-AACA-----CCAATCCACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000000000000000000000000000000000000000000000000000000000000
......................................ATT----AAGCCTACTCTGT-AAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CAAG-CC-TAAGCAGCT------GCACGCACTGT..........................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---AAAGCATGCT---TAATGGAT-........................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................ACTCTCCGCCCCCCTTTCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AG-CC-TAAGCAGCT------GCACGCA..............................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AGAAAACA-------CCCATTTAATT..................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AGCT------GCACGCACTGTGCTGGCCGACTC..............................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TAAGCAGCT------GCACGCACTGTGCTGGCCGA.................................................................................................................................................................................................................................2911.001000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................C--TG---------------------------AT-------------G---------C------GCGCCGGC-------ACA----GGCTGTGGC....................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................G-----TCAAG-CC-TAAGCAGCT------GC...................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................C-TAAGCAGCT------GCACGCACTGTGCT.......................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................C-------ACA----GGCTGTGGCAGCTG-CCA...........................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAT---AAAGCATGCT---TAATG............................................................2111.001000100000000000000000000000000000000000000000000000000000000000
...............T--------GAAAACC-TTAACAATT----AAGCCTACTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................G-CCACATTCCAAG-----TCAAG-CC-TAAGCAG.............................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GCACGCACTGTGCTGGCCGACT...............................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCT---TAATGGAT-TTGAAAATG---------------------------------T.............2311.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCT---TAATGGAT-TTGAAAATG---------------------------------TATT..........2611.001000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TAAGCAGCT------GCACGCACTGTGCTGGCC...................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................AAGCCTACTCTGT-AACA-----CCAATCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................CCACTCCACTCTCCGCCCCCCTTTCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TTCCAAG-----TCAAG-CC-TAAGCAGCT------GCA..................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................ATTCCAAG-----TCAAG-CC-TAAGC...............................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............................................................A-----CCAATCCACTCCACTCCACTCCACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CCTC--TG---------------------------AT-------------G---------C------GCGCCGGC-------ACC----.............................................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................TC--TG---------------------------AT-------------G---------C------GCGCCGGC-------ACA----.............................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCATGCT---TAATGGAT-TTGA....................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CCACATTCCAAG-----TCAAG-CC-TAAGC...............................................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GAAGAG--GTGGC---A--------AA--TCCATAGAAAACA-------.............................................................................................................................................................................2711.001000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATGCT---TAATGGAT-TTGAAAAT................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................ATCCACTCCACTCCACTCCACT......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................A--------AA--TCCATAGAAAACA-------CCCATTTAAT...................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGCT---TAATGGAT-TTGAAAATG---------------------------------T.............2511.001000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................TAAGCAGCT------GCACGCACTGTG.........................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
.................................................................................CTCCACTCCACTCTCCGCCCCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGCT---TAATGGAT-TTGA....................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.......................................TT----AAGCCTACTCTGT-AACA-----CCAATCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAT-TTGAAAATG---------------------------------TATTCGTTGTATAT2711.001100000000000000000000000000000000000000000000000000000000000000
.................................TAACAATT----AAGCCTACTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................ATAGAAAACA-------CCCATTTAATTAT................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GC---A--------AA--TCCATAGAAAACA-------CCCAT........................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................CTCCACTCCACTCCACTCTCC..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAT-TTGAAAATG---------------------------------TATTCGT.......2011.001000000000000000000000000000000000100000000000000000000000000000
..............................................AGCCTACTCTGT-AACA-----CCAATCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................G---------C------GCGCCGGC-------ACA----GGCTGTGGCAGCT................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................GCT------GCACGCACTGTGCTGGCCGACT...............................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...............T--------GAAAACC-TTAACAATT----AAGCCTACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................GCTGGCCGACTCGAAGAG--GTG...................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATGCT---TAATGGAT-TT......................................................1911.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATGCT---TAATGGAT-TT......................................................1811.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTAAATTAAATGTTAT--------GAAAACC-TTATAAACT----AAGCCCATTCTGT-AAAA-----GAAATCA------------------------------------------------AACGCC--CGCCTCACGCCC----------ATCATCGCA-------------T----------------CTTC-CGC-------ACA-GGCTCTGGCAGCTGCTGCCCACATTCCAAG-----TCAAG-CC-CAAGCAGCT------GT--------------TCGGACTGAGCAGG-CCGAC--TCCATGAGGCG-----------------ACCAATCCCATCTAATCTATAATTCTTATTTATGTA-------------------T--TTGTATAT---------TATAATTT--------------------------------TGT---A-ATTGTATTTCTAACTGTTGTCGAGAAAAAAAAAGAAAAAGAAAAATCATTTAAAAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTAACTGTTGTCGAGA...............................2014.004200002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTCTAACTGTTGTCGAGA...............................2212.002100001
..............................................................................................................................................................CGCA-------------T----------------CTTC-CGC-------ACA-GGCTCTGGCAGC....................................................................................................................................................................................................................................................................................................2712.002200000
.......................................................................................................................................................................................................................................................CAAG-CC-CAAGCAGCT------GT--------------TCGGACT..............................................................................................................................................................................................................................2412.002200000
....................................................................................................................................................................................................................................................................................................TGAGCAGG-CCGAC--TCCATGAGG......................................................................................................................................................................................................2212.002200000
................................................................................................................................................................................................CTTC-CGC-------ACA-GGCTCTGGCAGC....................................................................................................................................................................................................................................................................................................2212.002200000
.......................................................................................................................................................................................................................................................CAAG-CC-CAAGCAGCT------GT--------------TCGGA................................................................................................................................................................................................................................2212.002100001
.........................................................................................................................................................................................................................................................................................................................................................................TTATTTATGTA-------------------T--TTGTATAT---------TATA....................................................................................................2411.001100000
.........................................................................................................................................................................................................................................................................................................................................................ATCTAATCTATAATTCTTATTT....................................................................................................................................................2211.001100000
.......................................................................................................................................................................................................................................................CAAG-CC-CAAGCAGCT------GT--------------TCGGAC...............................................................................................................................................................................................................................2311.001000001
......................................................................................................................................................................................................................................................................................................AGCAGG-CCGAC--TCCATGAGGCG-----------------A..................................................................................................................................................................................2311.001100000
..........................................................................................................................................................................................................................................................G-CC-CAAGCAGCT------GT--------------TCGGACT..............................................................................................................................................................................................................................2111.001000001
....................................AAACT----AAGCCCATTCTGT-AAAA-----G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............................................................................................................................................................................................................................TGCTGCCCACATTCCAAG-----TC...........................................................................................................................................................................................................................................................................2011.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AATTT--------------------------------TGT---A-ATTGTATTTCTAACTGTT......................................2711.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAGAAAAAAAAAGAAAAAG................2211.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTTGTCGAGAAAAAAAAAGA.....................2411.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TT--------------------------------TGT---A-ATTGTATTTCTAACTGTT......................................2411.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TT--------------------------------TGT---A-ATTGTATTTCTAACTGTTGT....................................2611.001100000
.......................................................................................................................................................................................................................................................................................................GCAGG-CCGAC--TCCATGAGGC.....................................................................................................................................................................................................2011.001100000
....................................................................................................................................................................................................................................................................................................TGAGCAGG-CCGAC--TCCATGAGGCG-----------------A..................................................................................................................................................................................2511.001100000
....................................................................................................................................................................................................................................................................................................TGAGCAGG-CCGAC--TCCATGAGGC.....................................................................................................................................................................................................2311.001100000
.................................................................................................................................................................A-------------T----------------CTTC-CGC-------ACA-GGCTCTGGCA......................................................................................................................................................................................................................................................................................................2211.001100000
.....................................................................................................................................................................................................................................................................................................GAGCAGG-CCGAC--TCCATGAGGCG-----------------A..................................................................................................................................................................................2411.001100000
.................................................................................................................................................................................................TTC-CGC-------ACA-GGCTCTGGCAGCTG..................................................................................................................................................................................................................................................................................................2311.001100000
............................................................................................................................................................ATCGCA-------------T----------------CTTC-CGC-------ACA-GGCTCTGGC.......................................................................................................................................................................................................................................................................................................2611.001100000
.......................................................................................................................................................................................................................................................................T------GT--------------TCGGACTGAGCAGG-C.....................................................................................................................................................................................................................1811.001000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTCTAACTGTTGTCG..................................1911.001000001
.............................................................................................................................................CC----------ATCATCGCA-------------T----------------CTTC-CGC-------ACA-GGC.............................................................................................................................................................................................................................................................................................................2511.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTAACTGTTGTCGAGAAAA............................2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATTTCTAACTGTTGTC...................................2111.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTAACTGTTGTCGAGAA..............................2111.001100000
.....................................................................................................................................................................................................................................................................GCT------GT--------------TCGGACTGAGCAGG-CCGAC--...............................................................................................................................................................................................................2411.001000001
......................................................................................................................................................................................................................................................................................................AGCAGG-CCGAC--TCCATGAGGC.....................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................A-------------T----------------CTTC-CGC-------ACA-GGCTCTGGCAGC....................................................................................................................................................................................................................................................................................................2411.001100000
...............................................................................................................................................................................................................................TGCTGCCCACATTCCAAG-----T............................................................................................................................................................................................................................................................................1911.001100000
...............................................................................................................................................................GCA-------------T----------------CTTC-CGC-------ACA-GGCTCTGGCAGC....................................................................................................................................................................................................................................................................................................2611.001100000
...................................................................................................................................................................................................................GGCTCTGGCAGCTGCTGCC.............................................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................ATCATCGCA-------------T----------------CTTC-CGC-------ACA-................................................................................................................................................................................................................................................................................................................2011.001100000
.................................................................................................................................................................................................................................................................................................GACTGAGCAGG-CCGAC--TCCATGAGGC.....................................................................................................................................................................................................2611.001000001
.................................................................................................................................................................................................................................................................................................................C--TCCATGAGGCG-----------------ACCAATCCCATCT......................................................................................................................................................................2511.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTAACTGTTGTCGAGA...............................1911.001000001
......................................................................................................................................CTCACGCCC----------ATCATCGCA-------------T----------------...................................................................................................................................................................................................................................................................................................................................1911.001000100
................................................................................................................................................................................................................................................................AAGCAGCT------GT--------------TCGGACTGAGCAGG-C.....................................................................................................................................................................................................................2511.001000001
...................................................................................................................................................................................................................................................................................................................................................................................A-------------------T--TTGTATAT---------TATAATTT--------------------------------TGT---..........................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................................................................................ATTTATGTA-------------------T--TTGTATAT---------TATA....................................................................................................2211.001100000
...............................................................................................................................................................................................................................................AG-----TCAAG-CC-CAAGCAGCT------.....................................................................................................................................................................................................................................................1811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT---A-ATTGTATTTCTAACTGT.......................................2111.001100000
droGri2
TTAA-----ACGTTAT--------TGA-GACCCTAACAATT----AAGCATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............TAT--------TGA-GACCCTAACAATT----A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110

Generated: 05/18/2015 at 01:05 PM