ID:

dsi_17352

 Coordinate:

2l:5002910-5003059 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.0 -36.9 -36.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TCGACAAGGAGGTGACTCTGGCCAAGGCCTACTTCAACAATGTGCAGCAGGTGAGTGAGTGAGGCGAATGAATGAAATTAGGATAGCACACGGAAGTAGGACGTGTATCATCCCACTGGGATTAGACCCAACCATCCTGACCAGCTATCGATTGTGGCGTCGATTTGATGGATATTTTGCATATGCCAGCTTGGCTTTGGCGTGTGGAAATTCCCACACTAACGAATACCGATTAGCCGGCAAGTGTTTT
**************************************************..((((.(((..((((.(((...(((((..((((...(((((.........)))))...))))...((((......)))).(((((.((((..(((((.....)))))))))....)))))..))))).))).)))).)))..))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 M053
female body
 SRR618934
dsim w501 ovaries
.CGACAAGGAGGTGACTCT....................................................................................................................................................................................................................................... 18 0 1 4.00 4 3 1 0 0
..........GGTGACTCTGGCCAAGGCCT............................................................................................................................................................................................................................ 20 0 1 2.00 2 1 1 0 0
...ACAAGGAGGAGACTCTGGCCAA................................................................................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0
............................................................................................................CATCCCACTGGGATTAGACC.......................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.CGACAAGGAGGTGACTCTGGCCAAGGCC............................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0
.....AAGGAGGTGACTCTGGCC................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0
.....AAGGAGGTGACTCTGGCCAAGGCCT............................................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0
.CGACAAGGAGGTGACTCTGGCCAAGGCCG............................................................................................................................................................................................................................ 29 1 1 1.00 1 1 0 0 0
.............GACTCTGGCCAAGGCCTACTT........................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0
..........GGTGACTCTGGCCAAGGCCTACTTCAAC.................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
..........GGTGACTCTGGCCAAGGCCTACTTCAA..................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
.........AGGTGACTCTGGCCAAGGCCTACTT........................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0
..............................................................................................................................................................................................................................CGAATACCGATTGGC............. 15 1 7 0.14 1 0 0 0 1
..................................................................................................................................................................................GCATAAGCCAGCTTGACT...................................................... 18 2 19 0.11 2 0 0 0 2
..................................................................................................................................................................................GCATAAGCCAGCTTG......................................................... 15 1 12 0.08 1 0 0 0 1
..................................CAACAATGTGCAGCAGGAC..................................................................................................................................................................................................... 19 2 12 0.08 1 1 0 0 0
...................................................TGAGTGCGTGAGGCG........................................................................................................................................................................................ 15 1 14 0.07 1 0 0 0 1
..............................................................................................AATTGGACGTGTATCAT........................................................................................................................................... 17 2 17 0.06 1 0 0 0 1
...................................................................................................................................................................................CATAAGCCAGCTTGACT...................................................... 17 2 20 0.05 1 0 0 0 1

Anti-sense strand reads

AGCTGTTCCTCCACTGAGACCGGTTCCGGATGAAGTTGTTACACGTCGTCCACTCACTCACTCCGCTTACTTACTTTAATCCTATCGTGTGCCTTCATCCTGCACATAGTAGGGTGACCCTAATCTGGGTTGGTAGGACTGGTCGATAGCTAACACCGCAGCTAAACTACCTATAAAACGTATACGGTCGAACCGAAACCGCACACCTTTAAGGGTGTGATTGCTTATGGCTAATCGGCCGTTCACAAAA
**************************************************..((((.(((..((((.(((...(((((..((((...(((((.........)))))...))))...((((......)))).(((((.((((..(((((.....)))))))))....)))))..))))).))).)))).)))..))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR618934
dsim w501 ovaries
 M023
head
 M025
embryo
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
....................CGGTTCCGGCAGATGTTGTT.................................................................................................................................................................................................................. 20 3 14 1.36 19 14 0 4 1 0 0
.......................................................................................................................CTAATGTGAGTCGGTAGGACTG............................................................................................................. 22 3 2 0.50 1 0 1 0 0 0 0
.......................................................................................TGTGCCTTCGCCCGGCACA................................................................................................................................................ 19 3 14 0.07 1 0 0 0 0 1 0
..........................................................................................................................................CTGGTCGATACCTAGCA............................................................................................... 17 2 15 0.07 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:5002860-5003109 + dsi_17352 TCGACAAGGAGGTGACTCTGGCCAAGGCCTACTTCAACAATGTGCAGCAGGTGAGTGAGT-----------------------------------G-AG---------GCGAATGAATGAAATTAGGATAGCACAC----------G---------------GAAGTAGGA---------------CGT--------GTATCAT-------CCCACTGG-----------GATTAGACCCAACC----ATCCT---GACCAGCTATCGATTGTGGCG---------------------------------------TCGATTT----------GATGGAT-AT-------TTTGCATATGCCAGC----------------------------------------------TTGG-CTTTGGCGTGTG-GAAATTCCCACACTAACGAAT----ACC----------------------------------------------------------------------------------GATTAG----CCGGCAAGTGTTTT
droSec2 scaffold_5:3279270-3279525 + TCGACAAGGAGGTGACTCTGGCCAAGGCCTACTTCAACAATGTGCAGCAGGTGAGTGAG-------------------------------------------------GCGAATGAATGAAATTAGGATAGCACACGGAAGTACACG---------------GAAGTAGGA---------------CGT--------GTATCAT-------CCCACTGG-----------GATTAGACCCAACC----ATCCT---GACCAGCTATCGATTGTGGCG---------------------------------------TCGAATT----------GATGGAT-AT-------TTTGCATATGCCAGC----------------------------------------------TTGG-CTTTGGCGTGTG-GAAATTCCCACACTAACGAAT----ACC----------------------------------------------------------------------------------GATTAG----CCGGCAAGTGTTTT
dm3 chr2L:5198075-5198319 + TCGACAAGGAGGTGACTCTGGCCAAGGCCTACTTCAACAATGTGCAGCAGGTGAGTGAGA--------------------------------------G---------GCGAATGAATGAAATTGTGTTAGTACAC----------G---------------GAAGTAGGA---------------CGT--------GTAT----------CCCACTGG-----------GATTAGACCCATCT----ATCCT---GACCAGCTATCGATTGTGGCG---------------------------------------TCGAATA----------GATGGAT-AT-------TTTGCATATGCTAGC----------------------------------------------TTGG-GCTTGGCGTGTG-GAAATTCCCACACTAACAAAT----ACC----------------------------------------------------------------------------------GATTAG----CCGGCAAATGTTTT
droEre2 scaffold_4929:5276176-5276427 + TCGACAAGGAGGTGACTCTGGCCAAGGCCTACTTCAGCAATGTGCAGCAGGTGAGTGATC-------------------------------GAG-GGATCGAAATGAATGAAATCAATGAAATCATGGTAGCACAC----------G---------------G-----------------------CGT--------GTAT----------CTCGCTGG-----------GATTAGACCCAGCC----ATCCT---GACCAGCTATCGATTGTGGCG---------------------------------------TCGAATT----------GATGGAT-AT-------TCTGCATATGCCAGT----------------------------------------------TTGG-CTTTGGCGTGTG-GAAATTCCCACACTAACGTAT----ACC----------------------------------------------------------------------------------GATTAG----CCGGCAGGTGTTTT
droYak3 2L:10329336-10329604 - TCGACAAGGAGGTGACTCTGGCCAAGGCCTACTTCAACAATGTGCAGCAGGTGAGTGATG----------------------A-GC---G--GT--------------GGATATTAATGAAATTATGATAGCACAC----------G---------------GATGTAGGA---------------CGTATGTACATATATG------GAACCCCCTG------------AATTAAACCCAACC----ATCCT---GACCAGCTATCGATTGTGGCG---------------------------------------TCGAATA----------GTTGGAT-AT-------TTAGCATATGTTTGT---ATGTCAGT-----------------------------------TTGA-GTTTGGCGTGTG-AAAATTCCCACACTAACGCAT----ACC----------------------------------------------------------------------------------GATTAG----CCGGCAAGTGTTTT
droEug1 scf7180000409005:1084748-1084995 + TGGACAAGGAGGTGATCCTGGCTAAGGCATACTTCAACAATGTGCAGCAGGTGAGTGGGG----------------------A------AG----G-AAAGAAATTAGGGAAATTAATTAAATTATGAAAG-------------------------------GAAGTGGGC---------------CATGT------GTA----------------TGG-----------GATAACAGCC--CC----ATCCT---AACCACCTATCGATTGTAGCAT--------------------------------------TCGACCA----------AATGGAT-AT-------TTTGCATATGCTAGT----------------------------------------------TCGG-GTTTGGCGTGTG-GAAATTCCCACACTAACGAAA----TAC----------------------------------------------------------------------------------GTTTAG----CCGGCAAGTGTTAT
droBia1 scf7180000302261:637214-637434 + TGGACAAGGAGGTGACCCTGGCCAAGGAGTACTTCAACAATGTGCAGCAGGTGAGCCAA--------------------------------------------------ACAATTAATAAAATTATGGAGCCAC---------CC-----------------------------------------------------------------------TGGGCACAGCCCGGGGG---AACCACCC----ATCCT---AACCAGCTATCGATTATAGCT---------------------------------------TCGTTTA----------GATGGTT-AT-------TTTGCATATGCTAGC----------------------------------------------TCGC-CTTTGGCGTGTG-GATATTCCCACACTAACG---------------------------------------------------------------------------------------------AGCAG----CCGGCAAGTGCTAT
droTak1 scf7180000415704:332189-332391 - TTGACAAGGAGGTGACACTTGCCAAGGAATATTTCAACAATGTGCAGCAGGTGAGTGG-------------------------------------------------------TTAATAAAATTATGGTGG------------------------------------------------------------------------------------------ATAGTCC--------ATCCATAC----ATCCT---AACCAGGTATCGATTATAGCT---------------------------------------TCGTTTA----------GATGGTT-AT-------TTTGCATATGTTAGT----------------------------------------------TCGG-TTTTAGCGTGTG-GAAATTCCCACACTAACGAA-------------------------------------------------------------------------------------------ACTAG----CCGGCAAGTGTTAT
droEle1 scf7180000491273:20120-20343 - TGGACAAGGAGGTGACACTGGCCAAGGCTTACTTCAACAATGTGCAGCAGGTGAGTGAGC-----------------------------G--GTGG-GG---------GAAAATTAATAAAATTATGGAGCCAC---------CATT---------------AAAGTGGGC---------------CAT---------------------------------------GTGGTGATGGCCAAC------TCCT---AACCAGCTATCGATT----------------------------------------------------------------TGGAT-AT--------TTGCATGTGTTAGT----------------------------------------------TTGT-GTATGGCGTGTG-GGAATTCCCACACTAACTAAA----CAC----------------------------------------------------------------------------------GGCTAG----CCGGCAAGTGTTAT
droRho1 scf7180000779577:18053-18279 - TCGACAAGGAGGTGACACTGGCCAGGACGTACTTCAACAATGTGCAGCAGGTGAGGAAA-------------------------------------------------TGCAATTAATACAATTATGGAGCCAC---------CATT---------------AAAGTGGGC---------------CAT---------------------------------------GGGGTAAC-------------TCCTCACCATCAGCTATCGATTGTGGCG---------------------------------------TCAAATA----------GATGGAT-AT--------TTGCATATGTTAGT----------------------------------------------TCGG-TTTTGGCGTGTG-GAAATTCCCACACCAACTTAA----CAC----------------------------------------------------------------------------------GACTAG----CCGGCAAGTGTTAT
droFic1 scf7180000453842:1050287-1050521 - TCGACAAGGAGGTGACACTGGCCAAGGCTTACTTCAACAATGTTCAGCAGGTGAGTTAAG----------------------A------A--GTG--------ACTAGTAAAATTAATAAAATTATGGAGCCAC---------C-TC---------------GAAATGGAA---------------CAT---------------------------------------GGGTTAAC-------------TCCT---AACCATCTATCGATTGTGGCG---------------------------------------CTGAATA----------GATGGGC-AT--------TTGCATATGTTAGT----------------------------------------------TCGC-TTTTGGCGTGTGGGAAATTCCCACACTAGCAAAA----CAC----------------------------------------------------------------------------------GACTAG----CCGGCCATTGTTTT
droKik1 scf7180000302643:671668-671909 - TCGATAAGGAGGTGGCCCTAGCCAAGTCCTACTTCAACAATGTACAGCAGGTAAGTCGAG----------------------C------AG----G-AA---------ACAAATTAATAAAATTATGGATGCAC---------CC-C-----------------------------------------------------TCCCCCCA---CA---CCG-C-------ACAGCTGTGGC---CCAGCCCC-------CCTATCTATCGATTATAGCT---------------------------------------CCGAATA----------GATGGAT-AT--------TTGCATATGTTAGT----------------------------------------------TCGGCTTTTGGCGTGTG-GAAATTCCCACACAAACGAAT----CTC----------------------------------------------------------------------------------TATTTACCGGCA-ATTTGTATTGT
droAna3 scaffold_12916:9967149-9967363 - dan_635 TCGACAAGGAGGTGACGCTGGCCAAGGCGTACTTCAACAATGTCCAGCAGGTGAGTCCAGTCTAGTCTACTCCACTCCTGTCC------AG----G-GA---------GTGAATTATGAAAATTAAGAAACCGC----------------------------AAACG-------------------------------------------------------------------------------------G---TGCCACCTATCGATTATAATG---------------------------------------ACG-----------------GGAT-AT--------TTGCATAATTTAGT----------------------------------------------GTGGGGCTTGGTGTGCG-GAAATTCCCACACTT----------------------------------------------------------------------------------------------------GCCGGCTGCCAATTGTTGT
droBip1 scf7180000396580:1061124-1061329 + TCGACAAAGAGGTGACTCTGGCCAAGGCGTACTTCAACAATGTGCAGCAGGTGAGTCCACTC---------------CAGTCCAGCCTGAG----A-AA---------GTGAATTATGAAAATTAAGAAACCGC----------------------------AAACT-------------------------------------------------------------------------------------G---TGCCACCTATCGATTATAATG---------------------------------------ACG-----------------GGAT-AT--------TTGCATAATTTAGT----------------------------------------------GTGGGGCTTGGTGTGCG-GAAATTCCCACACTT----------------------------------------------------------------------------------------------------GCCGGCTGCCAATTGTTGT
dp5 4_group3:2694431-2694736 - TGGACAAGGAGGTGACACAAGCCAAGGTTTACTTCAACAACGTGCAGCAGGTGAGTGTTT-------------------------------T-------------------------------------------------------AGTGAAACGCGAAAGAAAATAGTGTCTGTGGCGGCAACT------------------------------CGGGAAC-------------ACTCCGTC----GCTCC---ATCTATCTATCGATTATAACT---------------------------------------AGGTATACGAATGT-G-GACGGAT-AT--------TGGCATATGTTGGTTGGATGTCGGTGTCGATGTCGATGTCGGTGGGATGG-----GATGG--GA-TTGGGGCTTGTG-GGAATTCCCACACAAACAGAG----CACAACACACGGCACTTGGGC-CTGGGGCTCT-----------------------------------------------------GGCTAG----CCGGCTACTGCTAC
droPer2 scaffold_1:4185270-4185581 - TGGACAAGGAGGTGACACAGGCCAAGGTTTACTTCAATAACGTGCAGCAGGTGAGTGTTT-------------------------------T-------------------------------------------------------AGTGAAACGCGAAAGAAAATAGTGTCTGTGGCGGCAACT------------------------------CGGGAAC-------------ACTCCGTC----GCTCC---ATCTATCTATCGATTATAACT---------------------------------------AGGAATACGAATGT-G-GACGGAT-AT--------TGGCATATGTTGGTTGGATGTCGGTGTCGATGTCGATGTCGGTGGGATGGGATGGGATGG--GA-TTGGGGCTTGTG-GGAATTCCCACACAAACAGAG----CACAACACACGGCACTGGGGCTCTGGGGCTCT-----------------------------------------------------GGCTAG----CCGGCTACTGCTAC
droWil2 scf2_1100000004585:1082640-1082849 - TGGACAAAGAGGTGACACAGGCAAAGACTTACTTCAACAATGTGCAGCAGGTAAGCAGG--------------------------------------------------CAAATAAATA--------------------------------------------------------------------------------------------------------------------------------------------CATATATCGATTATAAGC---GAGACAGGGCGACCCACCGACGACCGACCAGGCAAAACTGACA----------AATAATT-AT--------TTGCATATGTTAG----------------------------------------------------AATTGGCGTGTG-GAAATTCCCACACTAACAAAA----ATGAA--------------------------------------------------------------------------------GAGAAA----CAAGCAGGCTGTAT
droVir3 scaffold_12963:6401643-6401863 - dvi_10638 TCGACAAGGAGGTGACACAGGCCAAGGTTTACTTCAACAATGTGCAGCAGGTGAGTGCAGGC---------------CAC---AAAC--------------------------TGA-----ATTCGGTCTA----------------AG------------------------------------------------------------------------------------------------------CG---AAACATGTATCGATTAGAGAC--------------------------------------------AT----------GATG-ATGAT--------TAGCATATGTTAGA----------------------------------------------------GCTGGCGTGCG-GAAATTCCCACAGTGC----TCACAATGAC---------------------------AACAACCACCACAACAAACAAGAACCAGAAAATAAAACAGG----------------------CGGACA---CTTGT
droMoj3 scaffold_6500:25546271-25546514 - TCGACAAGGAGGTGACACAGGCCAAGGTTTACTTCAACAATGTGCAGCAGGTGAGTGCAAGC---------------CAC---AAACTAAC----G-GA---------GTGAATGAA-----------------------------------------------TGTGGCC----------CAAGCCGC--------GAAC------------CACTG----------------------------------G---CGGCAACTATCGATTTTAGAGAGCGAGA--------------------------------G------CGAGTGCTCTAATG-ATGAT--------TAGCATATAT-GGT----------------------------------------------TAGA-GCGTGGCGTGCG-GAAATTCCCACAGTGT----TGACAACAAC---------------------------AATAACAACAACAACA----ACAACAAC-A--------------------------------------A---CTTCA
droGri2 scaffold_15252:9629441-9629675 - TCGACAAGGAGGTGACACAGGCCAAGGTTTACTTCAACAACGTGCAGCAGGTGAGTGCTCCG---------------AAC---AAAC--------------------------TAAACGCAATTCGGGCAA---------------------------------------------------------T---------------------------------------------------------------G---GAACATCTATCGATTAGAGTA---------------------------------------T-------------------A-CTCATTAGTAGTCTT--ATAT-------------------------------------------------------G-CGTTGGCGTACG-GAAATCCCCACTCTGC----TATCGATGAA---------------------------GACAAAAACAACAT-AAACGGCAACAAC-AATTAAAACAAGCGGACAGCAGCG----------CCGGCAATTGTTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCGACAAGGAGGTGACTCTGGCCAAGGCCTACTTCAACAATGTGCAGCAGGTGAGTGAGT-----------------------------------G-AG---------GCGAATGAATGAAATTAGGATAGCACAC----------G---------------GAAGTAGGA---------------CGT--------GTATCAT-------CCCACTGG-----------GATTAGACCCAACC----ATCCT---GACCAGCTATCGATTGTGGCG---------------------------------------TCGATTT----------GATGGAT-AT-------TTTGCATATGCCAGC----------------------------------------------TTGG-CTTTGGCGTGTG-GAAATTCCCACACTAACGAAT----ACC----------------------------------------------------------------------------------GATTAG----CCGGCAAGTGTTTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.CGACAAGGAGGTGACTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.00410300000000000000
..........GGTGACTCTGGCCAAGGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00210100000000000000
.........................................................................................................................................................................................................CAT-------CCCACTGG-----------GATTAGACC....................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.CGACAAGGAGGTGACTCTGGCCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
.....AAGGAGGTGACTCTGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.....AAGGAGGTGACTCTGGCCAAGGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000000000000000
.CGACAAGGAGGTGACTCTGGCCAAGGCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100000000000000
.............GACTCTGGCCAAGGCCTACTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
..........GGTGACTCTGGCCAAGGCCTACTTCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
..........GGTGACTCTGGCCAAGGCCTACTTCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
.........AGGTGACTCTGGCCAAGGCCTACTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
..................................CAACAATGTGCAGCAGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.08100100000000000000
droSec2
TCGACAAGGAGGTGACTCTGGCCAAGGCCTACTTCAACAATGTGCAGCAGGTGAGTGAG-------------------------------------------------GCGAATGAATGAAATTAGGATAGCACACGGAAGTACACG---------------GAAGTAGGA---------------CGT--------GTATCAT-------CCCACTGG-----------GATTAGACCCAACC----ATCCT---GACCAGCTATCGATTGTGGCG---------------------------------------TCGAATT----------GATGGAT-AT-------TTTGCATATGCCAGC----------------------------------------------TTGG-CTTTGGCGTGTG-GAAATTCCCACACTAACGAAT----ACC----------------------------------------------------------------------------------GATTAG----CCGGCAAGTGTTTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.CGACAAGGAGGTGACTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..........GGTGACTCTGGCCAAGGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..........GGTGACTCTGGCCAAGGCCTACTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
.CGACAAGGAGGTGACTCTGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..........GGTGACTCTGGCCAAGGCCTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
dm3
TCGACAAGGAGGTGACTCTGGCCAAGGCCTACTTCAACAATGTGCAGCAGGTGAGTGAGA--------------------------------------G---------GCGAATGAATGAAATTGTGTTAGTACAC----------G---------------GAAGTAGGA---------------CGT--------GTAT----------CCCACTGG-----------GATTAGACCCATCT----ATCCT---GACCAGCTATCGATTGTGGCG---------------------------------------TCGAATA----------GATGGAT-AT-------TTTGCATATGCTAGC----------------------------------------------TTGG-GCTTGGCGTGTG-GAAATTCCCACACTAACAAAT----ACC----------------------------------------------------------------------------------GATTAG----CCGGCAAATGTTTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.CGACAAGGAGGTGACTCTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GGCCAAGGCCTACTTCAACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TGCATATGCTAGC----------------------------------------------TTGG-GCTTGG.............................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GACAAGGAGGTGACTCTGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGGCCTACTTCAACAATGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TTAGTACAC----------G---------------GAAGTAGGA---------------CGT--------GTA...........................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
......AGGAGGTGACTCTGGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AAGGAGGTGACTCTGGCCAAGGCCTACTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
.....................................CAATGTGCAGCAGGTGAGTGAGA--------------------------------------G---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
.....AAGGAGGTGACTCTGGCCAAGGCCTACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................TGTTAGTACAC----------G---------------GAAGTAGGA---------------CGT--------GTA...........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................CCAAGGCCTACTTCAACAATGTGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................TTAGTACAC----------G---------------GAAGTAGGA---------------CGT--------GTG...........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................GATTGTGGCG---------------------------------------TCGAATA----------GATG..................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................................................................................................................................TGTGGCG---------------------------------------TCGAATA----------GATGGAT-..............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................GCAGCAGGTGAGTGAGA--------------------------------------G---------G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................CTTCAACAATGTGCAGCAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GGCCAAGGCCTACTTCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATGTGCAGCAGGTGAGTGAGA--------------------------------------G---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TAGC----------------------------------------------TTGG-GCTTGGCGTGTG-G.....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................TCAACAATGTGCAGCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............CTCTGGCCAAGGCCTACTTCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................CGATTGTGGCG---------------------------------------TCGAATA----------GAT...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TTGTGGCG---------------------------------------TCGAATA----------GATGGA................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
....................................ACAATGTGCAGCAGGTGAGTGAGA--------------------------------------G---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........AGGTGACTCTGGCCAAGGCCTACTTCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AATGTGCAGCAGGTGAGTGAGA--------------------------------------G---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................CAC----------G---------------GAAGTAGGA---------------CGT--------GTAT----------CCCACTGG-----------.............................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
....................................................GAGTGAGA--------------------------------------G---------GCGAATGAATGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................CTACTTCAACAATGTGCAGCAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCAAGGCCTACTTCAACAATGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGACAAGGAGGTGACTCTGGCCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........AGGTGACTCTGGCCAAGGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................T-------TTTGCATATGCTAGC----------------------------------------------TTGG-GCTT...............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........GGTGACTCTGGCCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................GCTAGC----------------------------------------------TTGG-GCTTGGCGTGTG-G.....................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................................................................................................................................................................................................T-AT-------TTTGCATATGCTAGC----------------------------------------------T.......................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........GAGGTGACTCTGGCCAAGGCCTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TTAGACCCATCT----ATCCT---GACCAGC............................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................ATCT----ATCCT---GACCAGCTATCG.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................CAAGGCCTACTTCAACAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GGTGACTCTGGCCAAGGCCTACTTCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................ATCGATTGTGGCG---------------------------------------TCGAATA----------GATGGAT-AT-------.....................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TAGGA---------------CGT--------GTAT----------CCCACTGG-----------GATTAGACC....................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............CTCTGGCCAAGGCCTACTTCAACAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TCGATTGTGGCG---------------------------------------TCGAATA----------GATGGA................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TTCAACAATGTGCAGCAGGTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TA----------GATGGAT-AT-------TTTGCATATGCTAGC----------------------------------------------........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TCCT---GACCAGCTATCGATTGTGGCG---------------------------------------TC.....................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................................................................................................TGAATGAAATTGTGTTAGTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GGAGGTGACTCTGGCCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TTGTGGCG---------------------------------------TCGAATA----------GATGGAT-AT-------.....................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....CAAGGAGGTGACTCTGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACTTCAACAATGTGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGGAGGTGACTCTGGCCAAGGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GA--------------------------------------G---------GCGAATGAATGAAATTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................GGCCTACTTCAACAATGTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GACAAGGAGGTGACTCTGGCCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCGACAAGGAGGTGACTCTGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................CCT---GACCAGCTATCGATTGTG.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCGACAAGGAGGTGACTCTGGCCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCTGGCCAAGGCCTACTTCAACAATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GACAAGGAGGTGACTCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTTCAACAATGTGCAGCAGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CAACAATGTGCAGCAGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCGACAAGGAGGTGACTCTGGCCAAGGCCTACTTCAGCAATGTGCAGCAGGTGAGTGATC-------------------------------GAG-GGATCGAAATGAATGAAATCAATGAAATCATGGTAGCACAC----------G---------------G-----------------------CGT--------GTAT----------CTCGCTGG-----------GATTAGACCCAGCC----ATCCT---GACCAGCTATCGATTGTGGCG---------------------------------------TCGAATT----------GATGGAT-AT-------TCTGCATATGCCAGT----------------------------------------------TTGG-CTTTGGCGTGTG-GAAATTCCCACACTAACGTAT----ACC----------------------------------------------------------------------------------GATTAG----CCGGCAGGTGTTTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.CGACAAGGAGGTGACTCTGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0022000000
......................CAAGGCCTACTTCAGCAATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...............CTCTGGCCAAGGCCTACTTCAGCAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
.............GACTCTGGCCAAGGCCTACTTCAGCAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000
.....AAGGAGGTGACTCTGGCCAAGGCCTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
...........................CCTACTTCAGCAATGTGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..............................ACTTCAGCAATGTGCAGCAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
......................CAAGGCCTACTTCAGCAATGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
.CGACAAGGAGGTGACTCTGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
.....AAGGAGGTGACTCTGGCCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.................CTGGCCAAGGCCTACTTCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.CGACAAGGAGGTGACTCTGGCCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
..............................ACTTCAGCAATGTGCAGCAGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
droYak3
TCGACAAGGAGGTGACTCTGGCCAAGGCCTACTTCAACAATGTGCAGCAGGTGAGTGATG----------------------A-GC---G--GT--------------GGATATTAATGAAATTATGATAGCACAC----------G---------------GATGTAGGA---------------CGTATGTACATATATG------GAACCCCCTG------------AATTAAACCCAACC----ATCCT---GACCAGCTATCGATTGTGGCG---------------------------------------TCGAATA----------GTTGGAT-AT-------TTAGCATATGTTTGT---ATGTCAGT-----------------------------------TTGA-GTTTGGCGTGTG-AAAATTCCCACACTAACGCAT----ACC----------------------------------------------------------------------------------GATTAG----CCGGCAAGTGTTTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........GGTGACTCTGGCCAAGGCCTACTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00201100000000
.....AAGGAGGTGACTCTGGCCAAGGCCTACTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100000000
......................CAAGGCCTACTTCAACAATGTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
TCGACAAGGAGGTGACTCTGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
...................GGCCAAGGCCTACTTCAACAATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.CGACAAGGAGGTGACTCTGGCCAAGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
droEug1
TGGACAAGGAGGTGATCCTGGCTAAGGCATACTTCAACAATGTGCAGCAGGTGAGTGGGG----------------------A------AG----G-AAAGAAATTAGGGAAATTAATTAAATTATGAAAG-------------------------------GAAGTGGGC---------------CATGT------GTA----------------TGG-----------GATAACAGCC--CC----ATCCT---AACCACCTATCGATTGTAGCAT--------------------------------------TCGACCA----------AATGGAT-AT-------TTTGCATATGCTAGT----------------------------------------------TCGG-GTTTGGCGTGTG-GAAATTCCCACACTAACGAAA----TAC----------------------------------------------------------------------------------GTTTAG----CCGGCAAGTGTTATSizeHit CountTotal NormTotal
No Reads
droBia1
TGGACAAGGAGGTGACCCTGGCCAAGGAGTACTTCAACAATGTGCAGCAGGTGAGCCAA--------------------------------------------------ACAATTAATAAAATTATGGAGCCAC---------CC-----------------------------------------------------------------------TGGGCACAGCCCGGGGG---AACCACCC----ATCCT---AACCAGCTATCGATTATAGCT---------------------------------------TCGTTTA----------GATGGTT-AT-------TTTGCATATGCTAGC----------------------------------------------TCGC-CTTTGGCGTGTG-GATATTCCCACACTAACG---------------------------------------------------------------------------------------------AGCAG----CCGGCAAGTGCTATSizeHit CountTotal NormTotal
No Reads
droTak1
TTGACAAGGAGGTGACACTTGCCAAGGAATATTTCAACAATGTGCAGCAGGTGAGTGG-------------------------------------------------------TTAATAAAATTATGGTGG------------------------------------------------------------------------------------------ATAGTCC--------ATCCATAC----ATCCT---AACCAGGTATCGATTATAGCT---------------------------------------TCGTTTA----------GATGGTT-AT-------TTTGCATATGTTAGT----------------------------------------------TCGG-TTTTAGCGTGTG-GAAATTCCCACACTAACGAA-------------------------------------------------------------------------------------------ACTAG----CCGGCAAGTGTTATSizeHit CountTotal NormTotal
No Reads
droEle1
TGGACAAGGAGGTGACACTGGCCAAGGCTTACTTCAACAATGTGCAGCAGGTGAGTGAGC-----------------------------G--GTGG-GG---------GAAAATTAATAAAATTATGGAGCCAC---------CATT---------------AAAGTGGGC---------------CAT---------------------------------------GTGGTGATGGCCAAC------TCCT---AACCAGCTATCGATT----------------------------------------------------------------TGGAT-AT--------TTGCATGTGTTAGT----------------------------------------------TTGT-GTATGGCGTGTG-GGAATTCCCACACTAACTAAA----CAC----------------------------------------------------------------------------------GGCTAG----CCGGCAAGTGTTATSizeHit CountTotal NormTotal
No Reads
droRho1
TCGACAAGGAGGTGACACTGGCCAGGACGTACTTCAACAATGTGCAGCAGGTGAGGAAA-------------------------------------------------TGCAATTAATACAATTATGGAGCCAC---------CATT---------------AAAGTGGGC---------------CAT---------------------------------------GGGGTAAC-------------TCCTCACCATCAGCTATCGATTGTGGCG---------------------------------------TCAAATA----------GATGGAT-AT--------TTGCATATGTTAGT----------------------------------------------TCGG-TTTTGGCGTGTG-GAAATTCCCACACCAACTTAA----CAC----------------------------------------------------------------------------------GACTAG----CCGGCAAGTGTTATSizeHit CountTotal NormTotal
No Reads
droFic1
TCGACAAGGAGGTGACACTGGCCAAGGCTTACTTCAACAATGTTCAGCAGGTGAGTTAAG----------------------A------A--GTG--------ACTAGTAAAATTAATAAAATTATGGAGCCAC---------C-TC---------------GAAATGGAA---------------CAT---------------------------------------GGGTTAAC-------------TCCT---AACCATCTATCGATTGTGGCG---------------------------------------CTGAATA----------GATGGGC-AT--------TTGCATATGTTAGT----------------------------------------------TCGC-TTTTGGCGTGTGGGAAATTCCCACACTAGCAAAA----CAC----------------------------------------------------------------------------------GACTAG----CCGGCCATTGTTTTSizeHit CountTotal NormTotal
No Reads
droKik1
TCGATAAGGAGGTGGCCCTAGCCAAGTCCTACTTCAACAATGTACAGCAGGTAAGTCGAG----------------------C------AG----G-AA---------ACAAATTAATAAAATTATGGATGCAC---------CC-C-----------------------------------------------------TCCCCCCA---CA---CCG-C-------ACAGCTGTGGC---CCAGCCCC-------CCTATCTATCGATTATAGCT---------------------------------------CCGAATA----------GATGGAT-AT--------TTGCATATGTTAGT----------------------------------------------TCGGCTTTTGGCGTGTG-GAAATTCCCACACAAACGAAT----CTC----------------------------------------------------------------------------------TATTTACCGGCA-ATTTGTATTGTSizeHit CountTotal NormTotal
No Reads
droAna3
TCGACAAGGAGGTGACGCTGGCCAAGGCGTACTTCAACAATGTCCAGCAGGTGAGTCCAGTCTAGTCTACTCCACTCCTGTCC------AG----G-GA---------GTGAATTATGAAAATTAAGAAACCGC----------------------------AAACG-------------------------------------------------------------------------------------G---TGCCACCTATCGATTATAATG---------------------------------------ACG-----------------GGAT-AT--------TTGCATAATTTAGT----------------------------------------------GTGGGGCTTGGTGTGCG-GAAATTCCCACACTT----------------------------------------------------------------------------------------------------GCCGGCTGCCAATTGTTGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..GACAAGGAGGTGACGCTGGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.004000004
..GACAAGGAGGTGACGCTGGCCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........AGGTGACGCTGGCCAAGGCGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..GACAAGGAGGTGACGCTGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..........GGTGACGCTGGCCAAGGCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.......................AAGGCGTACTTCAACAATGTCCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.CGACAAGGAGGTGACGCTGGCCAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
................GCTGGCCAAGGCGTACTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.CGACAAGGAGGTGACGCTGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
................GCTGGCCAAGGCGTACTTCAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..GACAAGGAGGTGACGCTGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
TCGACAAAGAGGTGACTCTGGCCAAGGCGTACTTCAACAATGTGCAGCAGGTGAGTCCACTC---------------CAGTCCAGCCTGAG----A-AA---------GTGAATTATGAAAATTAAGAAACCGC----------------------------AAACT-------------------------------------------------------------------------------------G---TGCCACCTATCGATTATAATG---------------------------------------ACG-----------------GGAT-AT--------TTGCATAATTTAGT----------------------------------------------GTGGGGCTTGGTGTGCG-GAAATTCCCACACTT----------------------------------------------------------------------------------------------------GCCGGCTGCCAATTGTTGTSizeHit CountTotal NormTotal
No Reads
dp5
TGGACAAGGAGGTGACACAAGCCAAGGTTTACTTCAACAACGTGCAGCAGGTGAGTGTTT-------------------------------T-------------------------------------------------------AGTGAAACGCGAAAGAAAATAGTGTCTGTGGCGGCAACT------------------------------CGGGAAC-------------ACTCCGTC----GCTCC---ATCTATCTATCGATTATAACT---------------------------------------AGGTATACGAATGT-G-GACGGAT-AT--------TGGCATATGTTGGTTGGATGTCGGTGTCGATGTCGATGTCGGTGGGATGG-----GATGG--GA-TTGGGGCTTGTG-GGAATTCCCACACAAACAGAG----CACAACACACGGCACTTGGGC-CTGGGGCTCT-----------------------------------------------------GGCTAG----CCGGCTACTGCTACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................TGGGATGG-----GATGG--GA-TTGGGGC............................................................................................................................................2213.0030300000000
....................................................................................................................................................................................................................................................................................................................................................................................................GTCGGTGGGATGG-----GATGG--GA-...................................................................................................................................................2013.0030300000000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGG-----GATGG--GA-TTGGGG.............................................................................................................................................2213.0030200001000
.............................................................................................................................................................................................................................................................................................................................................................................................................ATGG-----GATGG--GA-TTGGGGCTTGTG-GGA...................................................................................................................................2612.0020000000020
.............................................................................................................................................................................................................................................................................................................................................................................................................ATGG-----GATGG--GA-TTGGGGCTTGTG-GG....................................................................................................................................2512.0020100000010
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGGTGGGATGG-----GATGG--GA-TTGGGGC............................................................................................................................................2612.0020000000020
........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGG-----GATGG--GA-TTGGGGC............................................................................................................................................2312.0020100000010
.GGACAAGGAGGTGACACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGG-----GATGG--GA-TTGGGGCTTGTG-GC....................................................................................................................................2411.0010001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TGGGATGG-----GATGG--GA-TTGGG..............................................................................................................................................2011.0010000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGG-----GATGG--GA-TTGGGGCTTGTG-GG....................................................................................................................................2411.0010000000001
.........................................................................................................................................................................................................................................................................................................................................................................................................TGGGATGG-----GATGG--GA-TTGGGG.............................................................................................................................................2111.0010100000000
...............CACAAGCCAAGGTTTACTTCAACAACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGGTGGGATGG-----GATGG--GA-TTG................................................................................................................................................2211.0010000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGG-----GATGG--GA-TTGGGGCTTG.........................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGGTGGGATGG-----GATGG--GA-...................................................................................................................................................1911.0010100000000
.............GACACAAGCCAAGGTTTACTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................AGGTATACGAATGT-G-GACGGA................................................................................................................................................................................................................................2111.0010000001000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGG-----GATGG--GA-TTGG...............................................................................................................................................2011.0010000010000
droPer2
TGGACAAGGAGGTGACACAGGCCAAGGTTTACTTCAATAACGTGCAGCAGGTGAGTGTTT-------------------------------T-------------------------------------------------------AGTGAAACGCGAAAGAAAATAGTGTCTGTGGCGGCAACT------------------------------CGGGAAC-------------ACTCCGTC----GCTCC---ATCTATCTATCGATTATAACT---------------------------------------AGGAATACGAATGT-G-GACGGAT-AT--------TGGCATATGTTGGTTGGATGTCGGTGTCGATGTCGATGTCGGTGGGATGGGATGGGATGG--GA-TTGGGGCTTGTG-GGAATTCCCACACAAACAGAG----CACAACACACGGCACTGGGGCTCTGGGGCTCT-----------------------------------------------------GGCTAG----CCGGCTACTGCTACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................TCAATAACGTGCAGCAGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGGTGGGATGGGATGGGATGG--......................................................................................................................................................2213.003000003
........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGGGATGGGATGG--GA-...................................................................................................................................................2152.60130100012
..............................................................................................................................................................................................................................................................................................................................................................................................................TGGGATGGGATGG--GA-TTGGGG.............................................................................................................................................2112.002000002
........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGGGATGGGATGG--G.....................................................................................................................................................2051.608000008
............................TTACTTCAATAACGTGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.............................................................................................................................................................GAAAGAAAATAGTGTCTGTGG.................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGGTGGGATGGGATGGGATG.........................................................................................................................................................2111.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGATGG--GA-TTGGGGC............................................................................................................................................1811.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................TGTCGGTGGGATGGGATGGGATG.........................................................................................................................................................2311.001000001
.......................................................................................................................................................................................................................................................................................................................................................................GTTGGTTGGATGTCGGTGT.........................................................................................................................................................................................1911.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGGGATGGGATGG--......................................................................................................................................................1970.292000002
...................................AATAACGTGCAGCAGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.201100000
droWil2
TGGACAAAGAGGTGACACAGGCAAAGACTTACTTCAACAATGTGCAGCAGGTAAGCAGG--------------------------------------------------CAAATAAATA--------------------------------------------------------------------------------------------------------------------------------------------CATATATCGATTATAAGC---GAGACAGGGCGACCCACCGACGACCGACCAGGCAAAACTGACA----------AATAATT-AT--------TTGCATATGTTAG----------------------------------------------------AATTGGCGTGTG-GAAATTCCCACACTAACAAAA----ATGAA--------------------------------------------------------------------------------GAGAAA----CAAGCAGGCTGTATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............GACACAGGCAAAGACTTACTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00301110
......AAGAGGTGACACAGGCAAAGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00201010
......................AAAGACTTACTTCAACAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..............................ACTTCAACAATGTGCAGCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...............CACAGGCAAAGACTTACTTCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...........GTGACACAGGCAAAGACTTACTTCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
......................................AATGTGCAGCAGGTAAGCAGG--------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
......AAGAGGTGACACAGGCAAAGACTTACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100001
......................AAAGACTTACTTCAACAATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.........................GACTTACTTCAACAATGTGCAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...ACAAAGAGGTGACACAGGCAAAGACTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
..................................CAACAATGTGCAGCAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.25100001
droVir3
TCGACAAGGAGGTGACACAGGCCAAGGTTTACTTCAACAATGTGCAGCAGGTGAGTGCAGGC---------------CAC---AAAC--------------------------TGA-----ATTCGGTCTA----------------AG------------------------------------------------------------------------------------------------------CG---AAACATGTATCGATTAGAGAC--------------------------------------------AT----------GATG-ATGAT--------TAGCATATGTTAGA----------------------------------------------------GCTGGCGTGCG-GAAATTCCCACAGTGC----TCACAATGAC---------------------------AACAACCACCACAACAAACAAGAACCAGAAAATAAAACAGG----------------------CGGACA---CTTGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................T----------GATG-ATGAT--------TAGCATAT............................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
............................TTACTTCAACAATGTGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
...............CACAGGCCAAGGTTTACTTCAACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
....................GCCAAGGTTTACTTCAACAATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.....AAGGAGGTGACACAGGCCAAGGTTTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.CGACAAGGAGGTGACACAGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.CGACAAGGAGGTGACACAGGCCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.CGACAAGGAGGTGACACAGGCCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000010000000000000000000000000000000000000000000
droMoj3
TCGACAAGGAGGTGACACAGGCCAAGGTTTACTTCAACAATGTGCAGCAGGTGAGTGCAAGC---------------CAC---AAACTAAC----G-GA---------GTGAATGAA-----------------------------------------------TGTGGCC----------CAAGCCGC--------GAAC------------CACTG----------------------------------G---CGGCAACTATCGATTTTAGAGAGCGAGA--------------------------------G------CGAGTGCTCTAATG-ATGAT--------TAGCATATAT-GGT----------------------------------------------TAGA-GCGTGGCGTGCG-GAAATTCCCACAGTGT----TGACAACAAC---------------------------AATAACAACAACAACA----ACAACAAC-A--------------------------------------A---CTTCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................CAAGC---------------CAC---AAACTAAC----G-GA---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.CGACAAGGAGGTGACACAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.................CAGGCCAAGGTTTACTTCAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................................AACAATGTGCAGCAGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18170.061000010
droGri2
TCGACAAGGAGGTGACACAGGCCAAGGTTTACTTCAACAACGTGCAGCAGGTGAGTGCTCCG---------------AAC---AAAC--------------------------TAAACGCAATTCGGGCAA---------------------------------------------------------T---------------------------------------------------------------G---GAACATCTATCGATTAGAGTA---------------------------------------T-------------------A-CTCATTAGTAGTCTT--ATAT-------------------------------------------------------G-CGTTGGCGTACG-GAAATCCCCACTCTGC----TATCGATGAA---------------------------GACAAAAACAACAT-AAACGGCAACAAC-AATTAAAACAAGCGGACAGCAGCG----------CCGGCAATTGTTGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:29 AM