ID:dsi_17334 |
Coordinate:3l:7913201-7913264 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
five_prime_UTR [3l_7913214_7913438_+]; exon [3l_7913214_7913594_+]
No Repeatable elements found
| ---------------------------------------------------------------##################################################################################################### TAACACGTCAAGTTTGATCCAACTTCTACTGTCAAGGCGTTGAAGCTAGTGTAAGTTGAAAATCGTGTAAAGCACTTGCTAAAATTTAGAATTGCTTTTTCAATTCCCGCCAAGTTGGGACCACCTGTCCAGGCCAGTGCTGTGAAGCGCGCGTGGCCACAGAG **************************************************...(((((((((........((((.((.((((...)))))).))))))))))))).........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|
| .............TTGATCCAACTTCTACTGTCAAGGCGTT........................................................................................................................... | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .............................TGTGAAGGCGTAGAAGCTGGTG................................................................................................................. | 22 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 |
| ..............................................................................................................................GACCAGGCCAGTGCT....................... | 15 | 1 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 |
| .....................ACTTCTAGTATCAAGG............................................................................................................................... | 16 | 2 | 20 | 0.10 | 2 | 2 | 0 | 0 | 0 |
| ..............................................TAGTGAAAGTTGAAAA...................................................................................................... | 16 | 1 | 12 | 0.08 | 1 | 0 | 0 | 0 | 1 |
| ..............................................................................................................................GACCAGGCCAGTGCTCT..................... | 17 | 2 | 13 | 0.08 | 1 | 0 | 1 | 0 | 0 |
| ........................TCTAATGTCAAGTCGTAGA......................................................................................................................... | 19 | 3 | 15 | 0.07 | 1 | 0 | 0 | 1 | 0 |
| ...................CAACTTCTAGTATCAAGGT.............................................................................................................................. | 19 | 3 | 18 | 0.06 | 1 | 1 | 0 | 0 | 0 |
| ............................................................................................................GCCAAGTTGGCACCA......................................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 |
| .................................AGGGCGTTGAAGCTAGAT................................................................................................................. | 18 | 3 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 |
|
ATTGTGCAGTTCAAACTAGGTTGAAGATGACAGTTCCGCAACTTCGATCACATTCAACTTTTAGCACATTTCGTGAACGATTTTAAATCTTAACGAAAAAGTTAAGGGCGGTTCAACCCTGGTGGACAGGTCCGGTCACGACACTTCGCGCGCACCGGTGTCTC
**************************************************...(((((((((........((((.((.((((...)))))).))))))))))))).........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|
| ...........CCAACTAAGTTGAAGATGACA.................................................................................................................................... | 21 | 2 | 2 | 0.50 | 1 | 1 | 0 |
| ................................................................................................AATAGTTCAGGGCGGTGCAA................................................ | 20 | 3 | 4 | 0.25 | 1 | 0 | 1 |
Generated: 04/24/2015 at 10:32 AM