ID:

dsi_17277

 Coordinate:

2r:12419478-12419627 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.6 -27.5 -27.5

Flybase annnotation

exon [2r_12419628_12419938_-]; five_prime_UTR [2r_12419628_12419938_-]; intron [2r_12418723_12419627_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GACTTCGGCTTTTCTGTGTTTCGCATTCAGTCTGTTGCTGTGGCGCAAAGGTAAACATGGTCACGATTCTACTCGAATCGGTTTGGATTGGGATTGGCTCGAATCGGAACGAATCGGTTTGGAGTCACTCAAATAGTGCGTCCAGCACGCAGCTGTGCGGATTACGTTCTGTTTTGTGTCCAGTATTCCGGATCCCAAGTTTCCTATCTGTATCTTAATCTGGCCGCCGCAGTATTGATTTAACACACAT
****************************************************************************...........(((((..((((((((((((........)))))).))))))))))).((((.(((.((((.....)))).))).))))..************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 O002
Head
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
.....................CGCATTCAGTCTGTTGCTGTG................................................................................................................................................................................................................ 21 0 1 2.00 2 0 2 0 0 0 0 0
.................GTTTCGCATTCAGTCTGTGG..................................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0
............................................................................ATCGGTTTGGATTGGGAT............................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................TCGAATCGGTTTGGATTGGGATTGGC........................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0
....................TCGCATTCAGTCTGTTGCTGTG................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................TTCTACTCGAATCGGTTTGG.................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................CGAATCGGTTTGGATTGGGATT........................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0
.........................TTCAGTCTGTTTCTGTGGCGC............................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0
................TGTTTCGCATTCAGTCTG........................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0
.........................................GGCGCAAAGGTAAACATGGT............................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0
.........................................................................................................................................GCGTCCAGCACGCAGCTGTGCGGATTACG.................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0
....................................................AAACATGGTCACGATTCTACTC................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................ACTCGAATCGGTTTGGAT.................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0
........................ATTCAGTCTGTTGCTGTG................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................ATCGGTTTGGATTGGGATTGGCT....................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
..............................................AAAGGTAAACATGGTCAC.......................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0
.................................................................................TTTGGATAAGGATTGGCTC...................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 1 0 0
......................................TGTGGCGCAATGGTA..................................................................................................................................................................................................... 15 1 5 0.20 1 0 0 0 0 1 0 0
......................................................................................................................................................................................GTATTCCGGATCGCA..................................................... 15 1 6 0.17 1 0 0 0 0 0 0 1
....................................TCTGTGGCGCAATGGTA..................................................................................................................................................................................................... 17 2 20 0.15 3 0 0 0 0 3 0 0
................................................................................GTTGGGATAAGGATTGGCTC...................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 1 0
................................................................................................GCACGAATTGGAACGAA......................................................................................................................................... 17 2 13 0.08 1 0 0 0 0 0 1 0
...............................................................................................................................................AGAACGCAGCTGTGCGT.......................................................................................... 17 2 15 0.07 1 0 0 0 0 0 1 0
................................................................GATCCTACTCTAAGCGGT........................................................................................................................................................................ 18 3 18 0.06 1 0 0 0 0 0 1 0
............................................................................ATCGGTTTGGACTGTGCT............................................................................................................................................................ 18 3 20 0.05 1 0 1 0 0 0 0 0

Anti-sense strand reads

CTGAAGCCGAAAAGACACAAAGCGTAAGTCAGACAACGACACCGCGTTTCCATTTGTACCAGTGCTAAGATGAGCTTAGCCAAACCTAACCCTAACCGAGCTTAGCCTTGCTTAGCCAAACCTCAGTGAGTTTATCACGCAGGTCGTGCGTCGACACGCCTAATGCAAGACAAAACACAGGTCATAAGGCCTAGGGTTCAAAGGATAGACATAGAATTAGACCGGCGGCGTCATAACTAAATTGTGTGTA
************************************************************************************...........(((((..((((((((((((........)))))).))))))))))).((((.(((.((((.....)))).))).))))..**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
...............................................................................................................................GAGTTTATCACGCAGGTC......................................................................................................... 18 0 1 4.00 4 2 2 0 0 0 0 0 0 0
.........................................................................................................................CTCAGTGAGTTTATCACGCAGGTCGT....................................................................................................... 26 0 1 3.00 3 1 2 0 0 0 0 0 0 0
....................................................TTTGTACCAGTGCTAAGATGA................................................................................................................................................................................. 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0
.........................................................................................................................CTCAGTGAGTTTATCACGCAGG........................................................................................................... 22 0 1 3.00 3 0 3 0 0 0 0 0 0 0
.........................................................................................................................................................................................AAGGCCTAGGGTTCAAAGCATAGACAT...................................... 27 1 1 2.00 2 0 0 2 0 0 0 0 0 0
..............................................................................................................................................................................................................................CGGCGGCGGCATAACTA........... 17 1 1 1.00 1 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................CCTAGGGTTCAAAGGATAGAC........................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................TTAGCCTTGCTTAGCCAAACC................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................CCAGTGCTAAGATGAGCTTAG........................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................CAGTGAGTTTATCACGCAGGTCG........................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................CAGGTCGTGCGTCGACACGC........................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................ATTTGTACCAGTGCTAAGATG.................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
CTGAAGCCGCAAAGACA......................................................................................................................................................................................................................................... 17 1 1 1.00 1 0 0 0 0 1 0 0 0 0
............................................................................................................................AGTGAGTTTATCACGCAGGTC......................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................GTCGACACGCCTAATGCA................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...AAGCCGAAAAGACACAAAGCGT................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................TCAAAGGATAGACATAGAATT................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................GTCATAAGGCCTAGGGTT.................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................CTCAGTGAGTTTATCACGCAGGTCGGGCG.................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................TAGCCTTGCTTAGCCAAACCTC.............................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................TGCTTAGCCAAACCTCAGTGAGTTTA.................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..............ACACAAAGCGTAAGTCAGACA....................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................GCCTGATGCTAGCCAAAACAC........................................................................ 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................TAGACCGGCGGCGTC.................. 15 0 3 0.33 1 0 0 0 0 0 0 1 0 0
...............................................................GCTAAGATGCGCATGGCCAA....................................................................................................................................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0
.....................GCGTAAGTCAGACAG...................................................................................................................................................................................................................... 15 1 20 0.15 3 0 0 0 0 0 0 3 0 0
..................................................................................................................................................................................................................ACAGAATTAGACCGG......................... 15 1 7 0.14 1 0 0 0 0 1 0 0 0 0
....................AGCGTAGGTCAGACA....................................................................................................................................................................................................................... 15 1 14 0.07 1 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................CGTCATGACTACATTGAGT... 19 3 16 0.06 1 1 0 0 0 0 0 0 0 0
.....................................................ATGAACTAGTGCTAAGATG.................................................................................................................................................................................. 19 3 19 0.05 1 0 0 0 0 0 0 0 1 0
....................AGCGTAAGTCAGACG....................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:12419428-12419677 - dsi_17277 GACTTCG------------GCTTTTCTGTGTT--------TCGCATTCAGTCTGTTGCTGTGGCGC-----------------AAAGGTAAACATGGTCACGATT----------CTACTCGAAT---------------CGGTTTGGATTGGGATTGG----CTCGAATCGGA----------------ACGAATCGGT----------TTGG-------AGTCACT-CAAATAGTGCGTCCAGCACGCAGCTGTGCGGATTACGTTCTGTTTT-GTGTCCAGTATTCCGGATCC------CA--AGTTTCCT--------ATCTGT--------ATCTTAATCTGGCCGCC-G------CAGTATTGATTTAACACAC------------------------AT
droSec2 scaffold_1:9243466-9243715 - GACTTCG------------GCTTTTCTGTGTT--------TCGCATTCAGTCTGTTGCTGAGGCGC-----------------AAAGGTAAACATGGTCACGATT----------CTACTCGAAT---------------CGGGTTGGATTGGGATTGG----CTCGAATCGAA----------------ACGAATCGGT----------TTGG-------AGTCACT-CAAATAGTGCGTCCAGCACGCAGCTGTGCGGACTACGTTTTGTTTT-GTGTCCAGTATTCCGGATCC------CA--AGTTTCGT--------ATCTGC--------ATCTTTATCTGGCCGCC-G------CAGTATTGATTTAACACAC------------------------AT
dm3 chr2R:11748938-11749193 - GACTTCG------------GCTTTTCTGTGTT--------TCGCATTCAGTCTGTTGCTGAGGCGC-----------------AAAGGTAAACATGGTCACGATT----------CTACTCGAAT---------------CGGGTTGGATTGG-ATTGG----ATCGAATCAAA---------ACGAAAAACGAATCGGT----------TTTG-------AGTCACT-CAAATAGTGCGTCCAGCACGCAGCTGTGCGGATTACGTTCTGTTTT-GTGTCCAGTATTCCGGATCC------CA--AGTTTCAT--------ATCTGT--------ATCATTATCTGGCCGCC-G------CAGTATTGATTTAACACAC------------------------AT
droEre2 scaffold_4845:14109272-14109541 + GATTTCG------------GCATTTTTGTGTTTCGC--ACTCGGATTCAGTCTGTTGCTGAGGCGCTCGCGGCCTGGAAGCCAAAAGGTAAACATGGTCACGACT----------CTACTCGAAT---------------CGGTTTGAATTGG----------ATCGAATCGAA----------------ACGAATCGGT----------TTGG-------AGCCAGC-CAAAAAGTACGTCCAGCACGCAGTTGTGCGGATTACGTTCTGTTTT-GTGTCCAGTATTCCGGATCC------GGATACTTTCGT--------ATCTGT--------ATCTTTATCTGGGCGCCAG------CAGTATTGATTTAACTCAC------------------------AT
droYak3 2R:17233977-17234251 + GATTTCGATTTCGATTTCGGCATTTTTGTGTTTCGC--ACTCGGATTCAGTCTGTTGCTGAGGCGCTCGCGGCCTGGAAGCCAAAAGGTAAACATGGTCACGATTCGATTCTATTCTACTCGAAT---------------CGGTTTGCATTGG----------AGCGATTTG-----------------------------------------G-------AGCCACC-GAAAGAGTGCGTCCAGCATGCAGCTGTGCGGATTACGTTCTGGTTT-GTGTCCAGTATTCCGGATCC------CA--ACTTTCGT--------ATCTGT--------ATCTTTATCTGGGCGCCAG------CAGTATTGATTTAACACAC------------------------AT
droEug1 scf7180000409672:656713-657010 - GATTTCG------------GTTTTTT--GGTTTCGC--TTTCGGATTCAGTCTGTTGCTGAGGCGCTAGCGGGCTGGAAGACAAAAGGTAAACATGGTCTCAACT----------CTCGTCGAAT---------------CGGTTTGGATTGG----------ATTGAATCGGATGGATTGGTACTGGGAACGGTTCGGT-----ATGTGTTGG-------AACCCCTCCGAAAAGTGCGTCCAACCCGGAGCTGTGCGAATTACGTTCTGTTTTTGAATCGAGTGTTCCATATCC------CA--ACTTTCGCCACCACCACACCGT--------ATCTTCATCTGGTCATCATC-----AAGTATTGATTTAACACAC------------------------AT
droBia1 scf7180000302292:3900486-3900770 + GATTTCG------------CTTTTT---GGCTTCGC--CTTCGGATTCAGTCTGTTGCTGGGGCGCTCGCGGCCTGGAAGCCAAGAGGTAAACATGGTCACCACT----------CAACCCGAAT---------------CGGTTTGGATTGG----------GTCGAATCGGATGGGCTG------GGAAC-------TTTGGAGTGCC-AGTAACCCAGAG----C-CATAAACTGCGTCCAGTCCGCAGCTCTGCGAGCTGCGTTCTGGCTG-AGAGCCAGTGTTCCGTATCT------CA--ACTCTCGACGCGT---ATCTGT--------ATCTTCATCTGGTCATCGG------CAGTATTGATTTAACACAC------------------------AT
droTak1 scf7180000415795:827536-827796 + GATTTCG------------GGTTTT---TGTCTCGC--TTTCGGATTCAGTCTGTTGCTGAGGCGCTCGCGGCCTGGAAGCCAAAAGGTAAACATGGTCTCCACTCAACTCGACTCGACTCGAAT---------------CGGTTTGGATTGC----------ATCGAATCGGA--------------------------------------------------------------TGCGTCCATCCCGGAGCTCTGCAAACTACGTTCTGTTCTAGCCCCCAGTGTTACGGATCC------CA--AGTTTCGTCACGT---ATCTGTATCTGTGTATCTTCAACTGGCCATCAG------TAGTATTGATTTAACACAC------------------------AT
droEle1 scf7180000491107:743441-743717 - GATTTCG------------GTTTG----TGTTTTCCCCTTTCGTATTCAGTCTGTTGCTGGGGCACTCGCGGCCTGGAAGCCAAAAGGTAAACATGGTCTTGA--------------------ATCGGTTAAGAT-----TGGATTGGATTGG-ATTGG----CTCGAATCGAA----------------AT-----TGT--G-------CGGG-------AGCTAC--AAGAAAGTGCGCCCAACCTGGATCTCTGCGAATTAGGTTCTGTTTA-AGAGCCAGTGTTCCGGGTCC------CA--ACTTTCGCCACTA---TTCTAT--------ATCTTCATCTGGTCATCCGTAGTACCAGTATTGATTTAACACAC------------------------AT
droRho1 scf7180000779911:355555-355817 + GATTTCGATTTCGGATTCGG----TTTGTGTTTCGC--CCTCGGATTCAGTCTGTTGCTGAGGCACTCGCGGCCTGGAAGCCAAAAGGTAAACATGGTCTCGA---------------CTTGGAT---------------TGGATTGGATTGG----------ATCGGAGTGGA---------------------T-------------------------------C-CGAAAAGTGCGTCCAACCTGCAGCCGTGCGGATTACGTTCTGGTTA-AGAGCCAGTGTTCCGGGTCG------CA--ACTTTCGTCACGA---TTCTAT--------ATCTCCATCTGGCCATCCGCAGTACCAGTATTGATTTAACACAC------------------------AT
droFic1 scf7180000453809:249691-249939 - GATTTCG------------GTTTTTTTCTGTTTCACCCTCTCGGATTCAGTCTGTTGCTG-----------GCCTGGAAGCCAAAAGGTAAACATAGTCACCA---------------CTCGAAT---------------CGGTTTGAATTGG----------TTCGAATCGGATGGGGTGTT----------GATGGGT----------TCGA------GAGCC--C-CCAAAAGTACGTCCTCGC--------------TTGAACTCTGTTTT-GGACCCAGTGTTCCGGGTCC------CC--ACATTCGCATGGA---ATCCGT--------TTCTTTATCTGGTCATCT-------GAGTATTGATTTAACACTC------------------------AT
droKik1 scf7180000302682:1950804-1951072 - GTTTTCG------------GTTCG-----GACTCGG--TTTCGGATTCAGTCTGTTGCTGAAGCACTCGCGGCCTGGAAGCCAAAAGGTAAACACAGAATCGT--------------------TA---ACGAGGCCGAACTGGATTGAAGTGG-TTT-CTTAGAAGGGATTGGA------------------------------------TC---------TGCCAC--TAAGGAGTTC-TCCAGTCTGGAGCATTAAGGATTATGATGTGCCT------------TCCCACATCC------CA--ATATTCAGC-------------------------TCATCTTGTAGTCGGTTCTAGCGGTATTGATTTAACACACTTTGTCTGTCCCAGTGGATGGGCAAT
droAna3 scaffold_13266:12445616-12445655 + GGATTCG------------GTTTG----GGTTTCGG--CTTTGGCTTCAGTCTGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396547:42948-42987 - GGATTCG------------GTTTG----GGTTTCGG--CTTTGGCTTCAGTCTGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_37:438781-438998 + ---------------------------------------TTCAGGTTTTGTCTACTGTCGAAACGCTTTCGGTCTGGAACT--TAAGGTAAAATCC---GCCACT---------------CGATT---CCGAGAC-----GCGTTTCGTCTGG----------AGCAA--------------------------ATCTGT----------TCAG-------TGTCGTC-CGTGGA-CGTGTT-------------------CCGTGTCCGGGTGC-GAGTCCAGTATTTT--ATCCCTACAGCT--GGCTCTGG--------GTCTGG--------CCCCCCATCTCAATGG-AG------CAGTATTGATTTGACACACT-------------------AAAAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GACTTCG------------GCTTTTCTGTGTT--------TCGCATTCAGTCTGTTGCTGTGGCGC-----------------AAAGGTAAACATGGTCACGATT----------CTACTCGAAT---------------CGGTTTGGATTGGGATTGG----CTCGAATCGGA----------------ACGAATCGGT----------TTGG-------AGTCACT-CAAATAGTGCGTCCAGCACGCAGCTGTGCGGATTACGTTCTGTTTT-GTGTCCAGTATTCCGGATCC------CA--AGTTTCCT--------ATCTGT--------ATCTTAATCTGGCCGCC-G------CAGTATTGATTTAACACAC------------------------ATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................CGCATTCAGTCTGTTGCTGTG........................................................................................................................................................................................................................................................................................................................................................2112.00202000000000000000
...........................................................................................................................AT---------------CGGTTTGGATTGGGAT..........................................................................................................................................................................................................................................................1811.00110000000000000000
.......................................................................................................................TCGAAT---------------CGGTTTGGATTGGGATTGG----C..................................................................................................................................................................................................................................................2611.00110000000000000000
........................................TCGCATTCAGTCTGTTGCTGTG........................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.......................................................................................................TT----------CTACTCGAAT---------------CGGTTTGG..................................................................................................................................................................................................................................................................2011.00101000000000000000
........................................................................................................................CGAAT---------------CGGTTTGGATTGGGATT.........................................................................................................................................................................................................................................................2211.00101000000000000000
............................TGTT--------TCGCATTCAGTCTG................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.............................................................GGCGC-----------------AAAGGTAAACATGGT....................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
.............................................................................................................................................................................................................................................GCGTCCAGCACGCAGCTGTGCGGATTACG............................................................................................................................................2911.00110000000000000000
.........................................................................................AAACATGGTCACGATT----------CTACTC.............................................................................................................................................................................................................................................................................................2211.00110000000000000000
.....................................................................................................................ACTCGAAT---------------CGGTTTGGAT................................................................................................................................................................................................................................................................1811.00101000000000000000
............................................ATTCAGTCTGTTGCTGTG........................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
...........................................................................................................................AT---------------CGGTTTGGATTGGGATTGG----CT.................................................................................................................................................................................................................................................2311.00110000000000000000
...................................................................................AAAGGTAAACATGGTCAC.................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
droSec2
GACTTCG------------GCTTTTCTGTGTT--------TCGCATTCAGTCTGTTGCTGAGGCGC-----------------AAAGGTAAACATGGTCACGATT----------CTACTCGAAT---------------CGGGTTGGATTGGGATTGG----CTCGAATCGAA----------------ACGAATCGGT----------TTGG-------AGTCACT-CAAATAGTGCGTCCAGCACGCAGCTGTGCGGACTACGTTTTGTTTT-GTGTCCAGTATTCCGGATCC------CA--AGTTTCGT--------ATCTGC--------ATCTTTATCTGGCCGCC-G------CAGTATTGATTTAACACAC------------------------ATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................TGCTGAGGCGC-----------------AAAGGTAAACATGGTCAC.................................................................................................................................................................................................................................................................................................................2912.0020200
.....................................................................................................................ACTCGAAT---------------CGGGTTGGATTGGGATTG........................................................................................................................................................................................................................................................2611.0010001
........................................................................................................................CGAAT---------------CGGGTTGGATTGGGATTGG----CTC................................................................................................................................................................................................................................................2711.0010100
.......................................................................................................................................................................................................................................................................................................C------CA--AGTTTCGT--------ATCTGC--------ATC...................................................................2011.0010100
................................................AGTCTGTTGCTGAGGCGC-----------------AAAGGT.............................................................................................................................................................................................................................................................................................................................2411.0010010
.............................................................GGCGC-----------------AAAGGTAAACATGGT....................................................................................................................................................................................................................................................................................................................2011.0011000
...............................................................................................................................................GTTGGATTGGGATTGG----CTCG...............................................................................................................................................................................................................................................2011.0011000
..............................................................................................................................................................................................................................................................................GTTTT-GTGTCCAGTATTCCGGA.................................................................................................................2211.0010001
.............................................................................................................................................................................................................................................................................TGTTTT-GTGTCCAGTATTCCGGAT................................................................................................................2411.0010100
dm3
GACTTCG------------GCTTTTCTGTGTT--------TCGCATTCAGTCTGTTGCTGAGGCGC-----------------AAAGGTAAACATGGTCACGATT----------CTACTCGAAT---------------CGGGTTGGATTGG-ATTGG----ATCGAATCAAA---------ACGAAAAACGAATCGGT----------TTTG-------AGTCACT-CAAATAGTGCGTCCAGCACGCAGCTGTGCGGATTACGTTCTGTTTT-GTGTCCAGTATTCCGGATCC------CA--AGTTTCAT--------ATCTGT--------ATCATTATCTGGCCGCC-G------CAGTATTGATTTAACACAC------------------------ATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................AGTCTGTTGCTGAGGCGC-----------------AAAGG..............................................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000001010
....................................................................................................................................................................................................................................................GCACGCAGCTGTGCGGATTACG............................................................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GGCGC-----------------AAAGGTAAACATGGT....................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGTCTGTTGCTGAGGCGC-----------------AA.................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000000000000000010
.....................................................................................................................ACTCGAAT---------------CGGGTTGGAT................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000
...TTCG------------GCTTTTCTGTGTT--------TCGC..........................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TCTGTTGCTGAGGCGC-----------------AAAGCCC............................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GGTTGGATTGG-ATTGG----ATCGA..............................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGTCTGTTGCTGAGGCGC-----------------AAA................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
........................................................GCTGAGGCGC-----------------AAAGGTAAACATGGTCA..................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CGCAGCTGTGCGGATTACGTT..........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020
.........................................................................................................................................................................................................................................................................................CAGTATTCCGGATCC------CA--AGT.................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000010
.................................................GTCTGTTGCTGAGGCGC-----------------AAAG...............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020
.........................................................................................................................................................................................................................................................CAGCTGTGCGGATTACGTTC.........................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CGAAT---------------CGGGTTGGATTGG-ATT.........................................................................................................................................................................................................................................................2121.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................ACATGGTCACGATT----------CTACTCG............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................TGAGGCGC-----------------AAAGGTAAACATG......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TCCGGATCC------CA--AGTTTCAT--------ATCTGT--------ATCAT.................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGTCTGTTGCTGAGGCGC-----------------AAAGGCC............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................AGTATTCCGGATCC------CA--AGTTTC..............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.......................................................TGCTGAGGCGC-----------------AAAGGTAAACATGGTC...................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................TCTGTGTT--------TCGCATTCAGTC..................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................ACTCGAAT---------------CGGGTTGGATTGG-A...........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TTTCAT--------ATCTGT--------ATCATTATC.............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CTGTGTT--------TCGCATTCAGTCTG................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................AACGAATCGGT----------TTTG-------AGTCACA-.................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................AGTCTGTTGCTGAGGCGC-----------------AAAGGT.............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CAGTCTGTTGCTGAGGCGC-----------------AA.................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................ACTCGAAT---------------CGGGTTGGATTGG-............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................GCTGAGGCGC-----------------AAAGGTAAACATGGTCACG................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................CTCGAAT---------------CGGGTTGGATTGG-A...........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ATAGTGCGTCCAGCACGCAGCTGTGCGGA.................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.................................................................................................................................................................................................AATCGGT----------TTTG-------AGTCACT-CAAA.............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TGAGGCGC-----------------AAAGGTAAACATA......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................TGGTCACGATT----------CTACTCGAAT---------------..........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GATTACGTTCTGTTTT-GTGTC.............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
............................................................AGGCGC-----------------AAAGGTAAACAT.......................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................................GTTGCTGAGGCGC-----------------AAAGGTA............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................TCC------CA--AGTTTCAT--------ATCTGT--------AT....................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................T---------------CGGGTTGGATTGG-ATTGG----AT.................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................GCTGTGCGGATTACGTTCTGT......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................................................................................................................TACTCGAAT---------------CGGGTTGGATTG..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GTTGCTGAGGCGC-----------------AAAGGTAAACATGG.....................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGTTGCTGAGGCGC-----------------AAAGGTA............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GCTGAGGCGC-----------------AAAGGTAAACA........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................AGTCTGTTGCTGAGGCGC-----------------AAAGGTA............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GGGTTGGATTGG-ATTGG----ATCGAATCA..........................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TTGG-ATTGG----ATCGAATCAAA---------ACGAA..........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................GGATTGG-ATTGG----ATCGAATC...........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................TTCTGTGTT--------TCGCATTCAGTCTGTTG.............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................AGGCGC-----------------AAAGGTAAACATGGT....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................TGG----ATCGAATCAAA---------ACGAAAAACGAA...................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGTT--------TCGCATTCAGTCTGTTG.............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................AGTCTGTTGCTGAGGCGC-----------------AAAGGTAAAC.........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................................................................................................................AGTCACT-CAAATAGTGCGTCC...................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................C-----------------AAAGGTAAACATGGTCACGA...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGTTGCTGAGGCGC-----------------AAAGGT.............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GC-----------------AAAGGTAAACATGGTC...................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTTT-GTGTCCAGTATTCCGGA.................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................CAGTATTCCGGATCC------CA--AGTT................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TATTCCGGATCC------CA--AGTTTCAT--------ATCTGT--------......................................................................2811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACTTCG------------GCTTTTCTGTGTT--------TCG...........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................CAGCTGTGCGGATTACGTTCTG.......................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................TGCTGAGGCGC-----------------AAAGGTAAACATGGT....................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................................................GTTGGATTGG-ATTGG----ATCGAA.............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................CGC-----------------AAAGGTAAACATGGTCAC.................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CGGGTTGGATTGG-ATTGG----A..................................................................................................................................................................................................................................................1930.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000
..........................................................................................................................AAT---------------CGGGTTGGATTGG-ATTGG----T..................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...........................................................................................................................AT---------------CGGGTTGGATTGG-ATTGG----AT.................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GGTTGGATTGG-ATTGG----AT.................................................................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GATTTCG------------GCATTTTTGTGTTTCGC--ACTCGGATTCAGTCTGTTGCTGAGGCGCTCGCGGCCTGGAAGCCAAAAGGTAAACATGGTCACGACT----------CTACTCGAAT---------------CGGTTTGAATTGG----------ATCGAATCGAA----------------ACGAATCGGT----------TTGG-------AGCCAGC-CAAAAAGTACGTCCAGCACGCAGTTGTGCGGATTACGTTCTGTTTT-GTGTCCAGTATTCCGGATCC------GGATACTTTCGT--------ATCTGT--------ATCTTTATCTGGGCGCCAG------CAGTATTGATTTAACTCAC------------------------ATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................ACTCGGATTCAGTCTGTTGCTGAGGC......................................................................................................................................................................................................................................................................................................................................................2611.0011000000
..........................................................................................................................................................................................................................................................AGTTGTGCGGATTACGTTC.........................................................................................................................................1911.0010001000
.......................................................................GCCTGGAAGCCAAAAGGTAAACATGG.....................................................................................................................................................................................................................................................................................................................2611.0010000010
droYak3
GATTTCGATTTCGATTTCGGCATTTTTGTGTTTCGC--ACTCGGATTCAGTCTGTTGCTGAGGCGCTCGCGGCCTGGAAGCCAAAAGGTAAACATGGTCACGATTCGATTCTATTCTACTCGAAT---------------CGGTTTGCATTGG----------AGCGATTTG-----------------------------------------G-------AGCCACC-GAAAGAGTGCGTCCAGCATGCAGCTGTGCGGATTACGTTCTGGTTT-GTGTCCAGTATTCCGGATCC------CA--ACTTTCGT--------ATCTGT--------ATCTTTATCTGGGCGCCAG------CAGTATTGATTTAACACAC------------------------ATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................T-GTGTCCAGTATTCCGGATCC------........................................................................................................2111.00101000000000
..............................................................................................................................................GTTTGCATTGG----------AGCGATTTG-----------------------------------------G-------.........................................................................................................................................................................................2111.00101000000000
..........................................................................................................................................................................................................................................................AGCTGTGCGGATTACGTTCTGGTTT-GT................................................................................................................................2711.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................TCTGGGCGCCAG------CAGTATTGATTTA................................2511.00101000000000
...................................................CTGTTGCTGAGGCGCTCGCGGCCTGGA........................................................................................................................................................................................................................................................................................................................................2711.00100100000000
droEug1
GATTTCG------------GTTTTTT--GGTTTCGC--TTTCGGATTCAGTCTGTTGCTGAGGCGCTAGCGGGCTGGAAGACAAAAGGTAAACATGGTCTCAACT----------CTCGTCGAAT---------------CGGTTTGGATTGG----------ATTGAATCGGATGGATTGGTACTGGGAACGGTTCGGT-----ATGTGTTGG-------AACCCCTCCGAAAAGTGCGTCCAACCCGGAGCTGTGCGAATTACGTTCTGTTTTTGAATCGAGTGTTCCATATCC------CA--ACTTTCGCCACCACCACACCGT--------ATCTTCATCTGGTCATCATC-----AAGTATTGATTTAACACAC------------------------ATSizeHit CountTotal NormTotal
No Reads
droBia1
GATTTCG------------CTTTTT---GGCTTCGC--CTTCGGATTCAGTCTGTTGCTGGGGCGCTCGCGGCCTGGAAGCCAAGAGGTAAACATGGTCACCACT----------CAACCCGAAT---------------CGGTTTGGATTGG----------GTCGAATCGGATGGGCTG------GGAAC-------TTTGGAGTGCC-AGTAACCCAGAG----C-CATAAACTGCGTCCAGTCCGCAGCTCTGCGAGCTGCGTTCTGGCTG-AGAGCCAGTGTTCCGTATCT------CA--ACTCTCGACGCGT---ATCTGT--------ATCTTCATCTGGTCATCGG------CAGTATTGATTTAACACAC------------------------ATSizeHit CountTotal NormTotal
No Reads
droTak1
GATTTCG------------GGTTTT---TGTCTCGC--TTTCGGATTCAGTCTGTTGCTGAGGCGCTCGCGGCCTGGAAGCCAAAAGGTAAACATGGTCTCCACTCAACTCGACTCGACTCGAAT---------------CGGTTTGGATTGC----------ATCGAATCGGA--------------------------------------------------------------TGCGTCCATCCCGGAGCTCTGCAAACTACGTTCTGTTCTAGCCCCCAGTGTTACGGATCC------CA--AGTTTCGTCACGT---ATCTGTATCTGTGTATCTTCAACTGGCCATCAG------TAGTATTGATTTAACACAC------------------------ATSizeHit CountTotal NormTotal
No Reads
droEle1
GATTTCG------------GTTTG----TGTTTTCCCCTTTCGTATTCAGTCTGTTGCTGGGGCACTCGCGGCCTGGAAGCCAAAAGGTAAACATGGTCTTGA--------------------ATCGGTTAAGAT-----TGGATTGGATTGG-ATTGG----CTCGAATCGAA----------------AT-----TGT--G-------CGGG-------AGCTAC--AAGAAAGTGCGCCCAACCTGGATCTCTGCGAATTAGGTTCTGTTTA-AGAGCCAGTGTTCCGGGTCC------CA--ACTTTCGCCACTA---TTCTAT--------ATCTTCATCTGGTCATCCGTAGTACCAGTATTGATTTAACACAC------------------------ATSizeHit CountTotal NormTotal
No Reads
droRho1
GATTTCGATTTCGGATTCGG----TTTGTGTTTCGC--CCTCGGATTCAGTCTGTTGCTGAGGCACTCGCGGCCTGGAAGCCAAAAGGTAAACATGGTCTCGA---------------CTTGGAT---------------TGGATTGGATTGG----------ATCGGAGTGGA---------------------T-------------------------------C-CGAAAAGTGCGTCCAACCTGCAGCCGTGCGGATTACGTTCTGGTTA-AGAGCCAGTGTTCCGGGTCG------CA--ACTTTCGTCACGA---TTCTAT--------ATCTCCATCTGGCCATCCGCAGTACCAGTATTGATTTAACACAC------------------------ATSizeHit CountTotal NormTotal
No Reads
droFic1
GATTTCG------------GTTTTTTTCTGTTTCACCCTCTCGGATTCAGTCTGTTGCTG-----------GCCTGGAAGCCAAAAGGTAAACATAGTCACCA---------------CTCGAAT---------------CGGTTTGAATTGG----------TTCGAATCGGATGGGGTGTT----------GATGGGT----------TCGA------GAGCC--C-CCAAAAGTACGTCCTCGC--------------TTGAACTCTGTTTT-GGACCCAGTGTTCCGGGTCC------CC--ACATTCGCATGGA---ATCCGT--------TTCTTTATCTGGTCATCT-------GAGTATTGATTTAACACTC------------------------ATSizeHit CountTotal NormTotal
No Reads
droKik1
GTTTTCG------------GTTCG-----GACTCGG--TTTCGGATTCAGTCTGTTGCTGAAGCACTCGCGGCCTGGAAGCCAAAAGGTAAACACAGAATCGT--------------------TA---ACGAGGCCGAACTGGATTGAAGTGG-TTT-CTTAGAAGGGATTGGA------------------------------------TC---------TGCCAC--TAAGGAGTTC-TCCAGTCTGGAGCATTAAGGATTATGATGTGCCT------------TCCCACATCC------CA--ATATTCAGC-------------------------TCATCTTGTAGTCGGTTCTAGCGGTATTGATTTAACACACTTTGTCTGTCCCAGTGGATGGGCAATSizeHit CountTotal NormTotal
No Reads
droAna3
GGATTCG------------GTTTG----GGTTTCGG--CTTTGGCTTCAGTCTGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....TCG------------GTTTG----GGTTTCGG--CTTTGGCTTCA.....................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...................GTTTG----GGTTTCGG--CTTTGGCT........................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
GGATTCG------------GTTTG----GGTTTCGG--CTTTGGCTTCAGTCTGTTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droPer2
---------------------------------------TTCAGGTTTTGTCTACTGTCGAAACGCTTTCGGTCTGGAACT--TAAGGTAAAATCC---GCCACT---------------CGATT---CCGAGAC-----GCGTTTCGTCTGG----------AGCAA--------------------------ATCTGT----------TCAG-------TGTCGTC-CGTGGA-CGTGTT-------------------CCGTGTCCGGGTGC-GAGTCCAGTATTTT--ATCCCTACAGCT--GGCTCTGG--------GTCTGG--------CCCCCCATCTCAATGG-AG------CAGTATTGATTTGACACACT-------------------AAAAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................AACGCTTTCGGTCTGGAACT--TAAGC..............................................................................................................................................................................................................................................................................................................................2511.001100000
........................................................GTCGAAACGCTTTCGGTCT...........................................................................................................................................................................................................................................................................................................................................1911.001010000

Generated: 05/18/2015 at 09:50 AM