ID:

dsi_17269

 Coordinate:

3r:550999-551147 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3r_551148_552181_-]; CDS [3r_551148_552181_-]; exon [3r_549163_550998_-]; CDS [3r_549163_550998_-]; intron [3r_550999_551147_-]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAAGGTCCAATCAGAGTGCTCTGCGTTTCTTCAACACTCATCAGCTTAAGGTAAGTAGAAGGCAATTGATAGTAATTACATTTTTCTTTGCAACGAAATTAGTAATAGTAGATGTAAACAAAATGTTGTATGATTTGAAAAAAAAAATGATGCAATATCTTACTTGTTGATTAATAATTAAACTGAATTTTTTCCTTAGTGCAACCTGCAACGGCATCCGCAGTGCAATAACCTACGTCAGTGGAAGGG
**************************************************.((((.((((..(((((((((((((((((((((....((((..........))))....)))))))).....(((((((((.((((........)))).))))))))).)))).)))))))............))..))))...)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
...........................................................................................................................TGTTGTCTGATTTGTAAAAA.......................................................................................................... 20 2 6 1.67 10 4 1 0 2 2 0 0 1 0 0
.....TCCAATCAGAGTGCTCTG.................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...GGTCCAATCAGAGTGCTCTGCGTTT............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................CTTAAGTGCAACCTGCAACGGCATCCGC............................ 28 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...........CAGAGTGCTCTGCGTTTCTTCAACACT................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................GTTGTCTGATTTGTAAAAA.......................................................................................................... 19 2 9 1.00 9 5 0 0 1 1 1 0 1 0 0
............................................................................................................................GTTGTCTGATTTGTAAAAAAAAA...................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................CTGCGTTTCTTCAACACTCAT................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......CCAATCAGAGTGCTCTGCGTTTCTT.......................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TGCAATAACCTACGTCAGTGGAAGG. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
............................................................................................................................GTTGTCTGATTTGTAAAAAAA........................................................................................................ 21 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................TTGTTGTCTGATTTGTAAAAAAA........................................................................................................ 23 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................TGTTGTCTGATTTGTAAAAAGA........................................................................................................ 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................TTGTTGTCTGATTTGTAAAAAA......................................................................................................... 22 3 7 0.29 2 0 0 0 0 1 0 1 0 0 0
.......................................................................................................................................................................................................................................CCTACGTCCGTGGAA... 15 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................TAGTAGATGTAGACAAAAA............................................................................................................................. 19 2 9 0.22 2 0 0 0 0 0 2 0 0 0 0
..............................................................................................................................TGTATGGTCTGAAAAAAAAA....................................................................................................... 20 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................TGTATGATTTCTAAAAAAAAA...................................................................................................... 21 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................GTTGTCTGATTTGTAAAAAA......................................................................................................... 20 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................TTGTTGTCTGATTTGAAAAA........................................................................................................... 20 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................GTGTGATTTGTAAAAAAAAA...................................................................................................... 20 2 7 0.14 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................GGTATGATTTGAAAAA........................................................................................................... 16 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................TGTTGTCTGATTTGTAAAGAA......................................................................................................... 21 3 10 0.10 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................TGTATGGTCTGAAAAAAAAAAA..................................................................................................... 22 3 17 0.06 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................GTTGTCTGATTTGTAAAGAA......................................................................................................... 20 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................TAGGTCAGTGGAAGCG 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................TGTTGTATGATTTGT............................................................................................................... 15 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................TGTCAGATTTGAAAAAAA......................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................TTGTCTGATTTGAAAA............................................................................................................ 16 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................TTGTAGGACTGGAAAAAAAAA....................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
..........TCAGAGTGGTATGCGT............................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CTTCCAGGTTAGTCTCACGAGACGCAAAGAAGTTGTGAGTAGTCGAATTCCATTCATCTTCCGTTAACTATCATTAATGTAAAAAGAAACGTTGCTTTAATCATTATCATCTACATTTGTTTTACAACATACTAAACTTTTTTTTTTACTACGTTATAGAATGAACAACTAATTATTAATTTGACTTAAAAAAGGAATCACGTTGGACGTTGCCGTAGGCGTCACGTTATTGGATGCAGTCACCTTCCC
**************************************************.((((.((((..(((((((((((((((((((((....((((..........))))....)))))))).....(((((((((.((((........)))).))))))))).)))).)))))))............))..))))...)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M023
head
 SRR553488
RT_0-2 hours eggs
 M024
male body
....................................................................................AGATACGTTGCTTTATTCAT................................................................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0
......................CGCAAAGAAGTTGTGAGTA................................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................................TAAGATACGTTGCTTTATTCATT................................................................................................................................................ 23 3 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................GTAGGCCTCACGTTA.................... 15 1 14 0.43 6 0 0 6 0 0 0 0
.............................................................................................GCTCTAATCATTATC............................................................................................................................................. 15 1 7 0.14 1 0 0 0 1 0 0 0
...........................AGAAGTTGTGCCTAGTCG............................................................................................................................................................................................................ 18 2 7 0.14 1 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................................GGATACAGACACCTTCC. 17 2 9 0.11 1 0 0 0 0 0 1 0
..........................AAGAAGTTGGGCCTAGTCG............................................................................................................................................................................................................ 19 3 13 0.08 1 0 0 0 0 0 0 1
.........................AAAGTAGTTGTCAGTAGT.............................................................................................................................................................................................................. 18 2 14 0.07 1 0 0 1 0 0 0 0
.........................................................................................GGTTGCGCTAATCATTATC............................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:550949-551197 - dsi_17269 GAAGGTCCAATCAGAGTGCTCTGCGTTTCTTCAACACTCATCAGCTTAAGGTAAGTAGAA-GGCAATTGATAGTAATTACATTTTTCTTTGCAACGAAATTAGTAATAGTAGATGTAA-------ACAAAATGTTGTAT---------------GATTTGAAAAAAAAAA--TGATGCA-------------------------------------------------------------A---TA----------------------------------------------------------------TCTTACTTG-----------TTGATTAATAAT----------------------------------------------------------------------------------------------------------------------------------------------------------TAAACTGAA-------------TTTTTTCCTTAGTGCAACCTGCAACGGCATCCGCAGTGCAATAACCTACGTCAGTGGAAGGG
droSec2 scaffold_6:716353-716578 - GAAGGTCCAATCAGAGTGCTCTGCGTTTCTTCAACACTCATCAGCTTAAGGTAAGTAGAA-GGCAATTGATAGTAATTACATTTTTCTTTGCAACGAAGTTAGTAATAGTAGATG---------------------------------------------AAAAAAAAAA--TGATGCA-------------------------------------------------------------A---TA----------------------------------------------------------------TCTTACTTG-----------TTGATTAATAAT----------------------------------------------------------------------------------------------------------------------------------------------------------TAAACTGAA-------------TTTTTTCCTTAGTGCAACCTGCAACGGCATCCGCAGTGCAATAACCTACGTCAGTGGAAGGG
dm3 chr3R:616441-616647 - GAAGGTCCAATCAGAGTGCTCTGCGTTTCTTCAACACCCATCAGCTTAAGGTAAGTAGAA-GGAAATTGAAAGTAATTACATTTTTCTTTGCAAGGAAATTTG----------------------------------------------------------AAAACAAAA--TGATGCA-------------------------------------------------------------A---TT----------------------------------------------------------------TTCCACTTG-----------TTGA----------------------------------------------------------------------------------------------------------------------------------------------AT------------------TCAACTGAA-------------TTTTTTCCTTAGTGCAACCTGCAACGCCATCCGCAGTGCAATAACCTACGTCAGTGGAAGGG
droEre2 scaffold_4770:924244-924449 - GAAGGTCTAATCAGAGTGCTTTGCGTTTCTTCAACACCCATCAGCTCAAGGTAAGGAAGG-GACAATGTATAGTAAATAGATTTTTCTTTGCAAAGAAATTAGTAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACTTT-----------TAGATCCATATAT-------------------------------------------------------------------------------------------------------------------------------GAATTAAT----------A--------A-AAC-----------TACTATTTCTTCCTTAGTGCAACCTGCAACGTCATCCGCAATGCAGTAACCTACGTCAGTGGAAAGG
droYak3 3R:935519-935732 - GAAGGTCCAATCAGAGTGCTTTGCGTTTCTTTAACACCCATCAGCTAAAGGTTAGTATGG-GACAATTTATACTAATTACATTTATATTTGCAATGACATTGGTAGTTGTAAATGTAAAACTAAAACAAA----TGTAT---------------GATTTCT-AAACAAAA--T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------------TTTTTTCCTTAGTGCAACCTGCAACGTCATCCGCAGTGCAGTAATCTACGTCAGTGGAAAGG
droEug1 scf7180000409759:550325-550501 - GTAGGTCCAATCAGAGCGCGCTGCGCTTCTTTAACACTCACCAACTAAAGGTAAGTAATG-TTGTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAT------ATT-------------------------------------CCCGTC---------------------TTACTGTGATAACGATAAA--------TTGAAAT----------------------------------------TTT-------------------------------------------------------------------------CA------A-------------------------------------------ATCTTTTATTTTCTAGTGCAATCTACAACGTCATCCCCAGTGTACCAATCTGCGTCAATGGAAAGG
droBia1 scf7180000302411:347637-347996 - GCAGGTCCAATCAGAGTGCACTGCGCTTCTTCAACACTCACCAGCTAAAGGTAAGTAGGA-ACCAATTAGTAGTAACTAGTT---------------A-----AAATCGTTGACTTAA-------GGGCAACATTGTCTTTGGGGTAGAATATTAAGTTGACAACAAGCA--TGTTGCAGGTGAAATATATACATACATCCTAAAAATGGATTTATAAGACAGTTTTGATGAGGCGCCC---------ACAAAATTTAATG---------------------TGTCCCACAAGC----------------CCATAGTT------------------------------------------------------------------GTTTTAGACG------------AGTGCCGCGTT-----------------TCATAATTGCTGTGATTATAAAATG------------------T------------------TCCTC-------------TATTTTTCTTCCCCAGTGCAACCTGCAGCGTCATCCTCAGTGCAGCAATCTTCGACAGTGGAAAGG
droTak1 scf7180000415261:513640-513753 + TGAGTTA-AATAA---------------------------------------------AA----------------------------------------------------------------------------------------------------------------CAAAA-----------------------------------------------------AAT-----CAA---T-------------------------------------------------------------------------------------TTAA-TTCT-----------------------------------------------------------------------------------------------------------------------------------GACTAAAT----------------------TCT----AC----TTTTCTTTTATCAACAGTGCAACTTGCAGCGTCATCCGCAGTGCAGTAATCTGCGTCAGTGGAAGGG
droEle1 scf7180000491104:2387627-2387774 - TAACTT---------------------------------------------------AAT-TGTT--------------------------------GATCC----------------------------------------------------GATTAAAAAATTAAAA--TAATG-----------------------------------------------------------------------------------------------------------------------------------------------------------AATTCCT---------------------------------------------------------------------------------------------------------------------------TTATTTTTGAC---ATTTAACTTAATGCATATTTTAAATTG-------------TTTTTATTCTCCAGTGCAACCTGCAGCGTCATCCGCAGTGCAGCAATCTGCGTCAGTGGAAGGG
droRho1 scf7180000777661:33053-33411 - GCAGGTCCAATCAGAGTGCGCTGCGGTTCTTCAACACCCATCAACTGAAGGTAAGTAGAA-GGCAATCAACATCGA--------------------------------------------------------------------------------------------------------------------------TCCTTAAACTAAATT------------TAGATGAAACCATC---------TTAAAATTAAATATTAAAAAAATATTAAAAAATATTTCCATTAAAACCAACTCAATTGTATTTAA--------------------------ATGTG--ATCAGCCAATTAATATAATCTTTAACATTAACTAAATTGTTTTCGACTCATATTAATTAAAGTAATTCGTTTATATAAACAAGTAAACTCTTTATATCTATGATGTCTAAGTAAATTTA-------------------------------------------------AATTTGTATTTTCTAGTGCAACCTGCAACGTCACCCGCAGTGCAGCAATCTGCGTCAGTGGAAGGG
droFic1 scf7180000453903:222852-222906 - GCAGGTCCAACCAGAGTGCGCTGCGGTTCTTCAACACCCACCAACTGAAGGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302634:308223-308385 - GGCGCTCCAACCAGAGTGCGTTGCGGTTCTTCAACACTCATCAGTTGAAGGTGAGCTTTTA-GCT------------------------------------------------------------------------------------------------GAGCTAAA--------------------------------------------------------------------------------------------------------------------------------------------------AATA-----------TAAATTCCCCCTTA--------------------------------------------------------------------------------------------------------------------------------AT--------------------------ACCAG---------TTTTTTCCTTTAACAGTGCAACCTGCAGCGCCATCCGCAGTGCAGTAACCTGCGTCAGTGGAAGGG
droAna3 scaffold_13340:22835739-22835899 - GTCGTTCCAACCAGAGTGCGCTAAGGTTCTTCAACACTCACCAGTTAAAGGTCAGTTCTG-GGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTGT---------ATTTAATTTAT-----------------------------------------------------------------------------------------------------------------------------------GACTAAT----------CG-------------T---TTT-----TTTTTTTAATCCCCAGTGCAACCTTCAGCGTCATCCACAATGCAGCAATCTCCGCCAGTGGAAGGG
droBip1 scf7180000396424:1110576-1110738 - GTCGTTCCAACCAAAGTGCGCTCAGGTTCTTCAACACTCACCAGCTGAAGGTCAGTAGGA-GGCAC--------------------------------AATCG----------------------------------------------------------TAT------TT-----------------------------------------------------------------------TAT----------------------------------------------------------------TCTAT----------------------TT-----------------------------------------------------------------------------------------------------------------------------------GACTAAC----------CG---------CTC-------------TCTTTACATCCCACAGTGCAACCTTCAGCGTCATCCACAATGCAGCAATCTCCGCCAGTGGAAGGG
dp5 2:22177413-22177573 + GCAGATCCAATCAGAGCGCGTTGCGTTTCTTCAACACGCATCAGTTGAAGGTGAGTCTGGAGGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC----------------------------------------------------------------TCTTACTCG-----------TGGACCCCTTTGTA-----------------------------------------------------------------------------------------------------------------------------------A-----------------------TCCT-----------CCTTTTCTCTTTCCAGTGCAACTTGCAGCGCCACCCACAGTGCAGCAATCTGCGGCAATGGAAGGG
droPer2 scaffold_3:4958530-4958690 + GCAGATCCAATCAGAGCGCGTTGCGTTTCTTCAACACGCATCAGTTGAAGGTGAGTCTGGAGGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC----------------------------------------------------------------TCTTACTCG-----------TGGATCCCTTTGTA-----------------------------------------------------------------------------------------------------------------------------------A-----------------------TCCT-----------CCTTTTCTCTTTCCAGTGCAACTTGCAGCGCCACCCACAGTGCAGCAATCTGCGGCAATGGAAGGG
droWil2 scf2_1100000004943:15074836-15075014 + GCAGATCCAATCAGAGTGCATTGCGTTTCTTTAACACACATCAGCTGAAGGTAAGTGGGG-AGGACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGAT---------------------------------------------------------------------------AGTAGTATCGATAAACGATTCCT-----------------------------------------------------------------------------------------------------------------------------------AATTAAT--------------------------GGTTTTCCCCTTCTGTCTCTCGTTTAGTGTAATCTACAGCGTCATCCTCAGTGCAGTAATCTGCGTCAATGGAAAGG
droVir3 scaffold_12855:8366870-8367033 - GGCGCACCAATCAGAGCGCGCTACGCTTCTTCAATACGCATCAGCTGAAGGTGAGTTGCT-AGTT--------------------------------AATCCG----------------------------------------------------------GAG------CT-----------------------------------------------------------------------TAT----------------------------------------------------------------CCTCACCTA---------------------------------------------------------------------------------------------------------------------------------------------------------CTAAGT------------------TGTGT-------------TCTGTATCTGCTCCAGTGCAATCTGCAACGTCATCCGCAGTGCAGCAATCTGCGTCAATGGAAAGG
droMoj3 scaffold_6540:23584777-23584955 - GACGCACCAACCAGAGTGCACTACGTTTCTTTAACACCCATCAATTGAAGGTAAGTCGAT----------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------GAAGAGCCCCCCAAGGCAATT-------------------------------------CCCGTCAGC----------------TTTTACTTA-----------TGATCTCCT---------------------------------------------------------------------------------------------------------------------------CTG-------------------------------------------------CTTTTGCCATCTCCAGTGCAATCTGCAGCGTCATCCGCTGTGCACCAATCTGCGCCAGTGGAAGGG
droGri2 scaffold_15074:4961661-4961827 - GTCGCACCAATCAGAGTGCTTTGCGTTTCTTCAATACGCATCAGTTGAAGGTCAGTTTGCAAGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT----------------------------------------------------------------CTTCACTTA---------AATTGCTTTCT-----------------------------------------------------------------------------------------------------------------------------------TATTAATT----------A------------TT----AT----TGTTTTGGCATTCGCAGTGCAATTTACAGCGTCATCCGCAGTGCAGCAATCTGCGCCAGTGGAAGGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAAGGTCCAATCAGAGTGCTCTGCGTTTCTTCAACACTCATCAGCTTAAGGTAAGTAGAA-GGCAATTGATAGTAATTACATTTTTCTTTGCAACGAAATTAGTAATAGTAGATGTAA-------ACAAAATGTTGTAT---------------GATTTGAAAAAAAAAA--TGATGCA-------------------------------------------------------------A---TA----------------------------------------------------------------TCTTACTTG-----------TTGATTAATAAT----------------------------------------------------------------------------------------------------------------------------------------------------------TAAACTGAA-------------TTTTTTCCTTAGTGCAACCTGCAACGGCATCCGCAGTGCAATAACCTACGTCAGTGGAAGGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....TCCAATCAGAGTGCTCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
...GGTCCAATCAGAGTGCTCTGCGTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
...........CAGAGTGCTCTGCGTTTCTTCAACACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
....................CTGCGTTTCTTCAACACTCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
......CCAATCAGAGTGCTCTGCGTTTCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAATAACCTACGTCAGTGGAAGG.2511.00100000000010000000
...................................................................................................................................TGTTGTAT---------------GATTTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000100000000
droSec2
GAAGGTCCAATCAGAGTGCTCTGCGTTTCTTCAACACTCATCAGCTTAAGGTAAGTAGAA-GGCAATTGATAGTAATTACATTTTTCTTTGCAACGAAGTTAGTAATAGTAGATG---------------------------------------------AAAAAAAAAA--TGATGCA-------------------------------------------------------------A---TA----------------------------------------------------------------TCTTACTTG-----------TTGATTAATAAT----------------------------------------------------------------------------------------------------------------------------------------------------------TAAACTGAA-------------TTTTTTCCTTAGTGCAACCTGCAACGGCATCCGCAGTGCAATAACCTACGTCAGTGGAAGGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...GGTCCAATCAGAGTGCTCTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
..........TCAGAGTGCTCTGCGTTTCTTCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001
............................CTTCAACACTCATCAGCTTAAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.AAGGTCCAATCAGAGTGCTCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
dm3
GAAGGTCCAATCAGAGTGCTCTGCGTTTCTTCAACACCCATCAGCTTAAGGTAAGTAGAA-GGAAATTGAAAGTAATTACATTTTTCTTTGCAAGGAAATTTG----------------------------------------------------------AAAACAAAA--TGATGCA-------------------------------------------------------------A---TT----------------------------------------------------------------TTCCACTTG-----------TTGA----------------------------------------------------------------------------------------------------------------------------------------------AT------------------TCAACTGAA-------------TTTTTTCCTTAGTGCAACCTGCAACGCCATCCGCAGTGCAATAACCTACGTCAGTGGAAGGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...GGTCCAATCAGAGTGCTCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000002000000000000
............AGAGTGCTCTGCGTTTCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCAGAGTGCTCTGCGTTTCTTCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000
..........TCAGAGTGCTCTGCGTTTCTTCAACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...........CAGAGTGCTCTGCGTTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCCAATCAGAGTGCTCTGCGTTTCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............AGAGTGCTCTGCGTTTCTTCAACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
....GTCCAATCAGAGTGCTCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CAATCAGAGTGCTCTGCGTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GAAGGTCCAATCAGAGTGCTCTGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGCCATCCGCAGTGCAAT....................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGAGTGCTCTGCGTTTCTTCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCATCCGCAGTGCA......................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGTCCAATCAGAGTGCTCTGCGTTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGTGCAATAACCTACGTC..........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGTCCAATCAGAGTGCTCTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........AATCAGAGTGCTCTGCGTTTCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACCTGCAACGCCATCCGCA...........................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACGCCATCCGCAGTGCAA.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GAAGGTCCAATCAGAGTGCTCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......CCAATCAGAGTGCTCTGCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACGCCATCCGCAGTGCAATAAC.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGCAATAACCTACGTCAGTG......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GTGCTCTGCGTTTCTTCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GCTCTGCGTTTCTTCAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAATAACCTACGTCAGTGGAAGGG2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGCCATCCGCAGTGCA......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCCAATCAGAGTGCTCTGCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAGTGCAATAACCTACGTC..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATCAGAGTGCTCTGCGTTTCTTCAACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTACGTCAGTGGAAGG.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AATCAGAGTGCTCTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GAAGGTCCAATCAGAGTGCTCTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCTGCGTTTCTTCAACACCCATCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CCAATCAGAGTGCTCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCCAATCAGAGTGCTCTGCGTTTCTTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCGTTTCTTCAACACCCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGCGTTTCTTCAACACCCATCAGCTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AGTGCTCTGCGTTTCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...........................................GCTTAAGGTAAGTAGAA-GGAAATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
GAAGGTCCAATCAGAGTGCTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACCTGCAACGCCATCCGCAGTGC.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATCAGAGTGCTCTGCGTTTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........TCAGAGTGCTCTGCGTTTCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGTCCAATCAGAGTGCTCTGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACCTGCAACGCCATC...............................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTCTTCAACACCCATCAGCTTAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
................................AACACCCATCAGCTTAAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAATAACCTACGTCAGTGGAAGG.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
GAAGGTCCAATCAGAGTGCTCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.....................TGCGTTTCTTCAACACCCATCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CTGCGTTTCTTCAACACCCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CAGAGTGCTCTGCGTTTCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACCTGCAACGCCAT................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACGCCATCCGCAGTGCAATAACC................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGAGTGCTCTGCGTTTCTTCAACACCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGTCCAATCAGAGTGCTCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACTGAA-------------TTTTTTCCTTAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACCTACGTCAGTGGAAGG.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CTGCGTTTCTTCAACACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
....................CTGCGTTTCTTCAACACCCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTTCAACACCCATCAGCTTAAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAATAACCTACGTCAGT.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
GAAGGTCCAATCAGAGTGCTCTGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTAGAA-GGAAATTGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.AAGGTCCAATCAGAGTGCTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TCCACTTG-----------TTGA----------------------------------------------------------------------------------------------------------------------------------------------AT------------------TCAACTGAA-------------TTT...........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCCATCCGCAGTGCAAA....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGAGTGCTCTGCGTTTCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGGTCCAATCAGAGTGCTCTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........AATCAGAGTGCTCTGCGTTTCTTCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................TTCTTCAACACCCATCAGCTTAAGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATCAGAGTGCTCTGCGTTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..........TCAGAGTGCTCTGCGTTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CCAATCAGAGTGCTCTGCGTTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTAGAA-GGAAATTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCATCCGCAGTGCAATAAC.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AACACCCATCAGCTTAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droEre2
GAAGGTCTAATCAGAGTGCTTTGCGTTTCTTCAACACCCATCAGCTCAAGGTAAGGAAGG-GACAATGTATAGTAAATAGATTTTTCTTTGCAAAGAAATTAGTAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACTTT-----------TAGATCCATATAT-------------------------------------------------------------------------------------------------------------------------------GAATTAAT----------A--------A-AAC-----------TACTATTTCTTCCTTAGTGCAACCTGCAACGTCATCCGCAATGCAGTAACCTACGTCAGTGGAAAGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......CTAATCAGAGTGCTTTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000210
......CTAATCAGAGTGCTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000020
......CTAATCAGAGTGCTTTGCGTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000110
...................................................TAAGGAAGG-GACAATGTATAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
...GGTCTAATCAGAGTGCTTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGCAACGTCATCCGCAATGC.......................2311.0010001000
...GGTCTAATCAGAGTGCTTTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
...GGTCTAATCAGAGTGCTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...GGTCTAATCAGAGTGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGTCATCCGCAATGCA......................1911.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACCTGCAACGTCATCC..............................2111.0011000000
droYak3
GAAGGTCCAATCAGAGTGCTTTGCGTTTCTTTAACACCCATCAGCTAAAGGTTAGTATGG-GACAATTTATACTAATTACATTTATATTTGCAATGACATTGGTAGTTGTAAATGTAAAACTAAAACAAA----TGTAT---------------GATTTCT-AAACAAAA--T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------------TTTTTTCCTTAGTGCAACCTGCAACGTCATCCGCAGTGCAGTAATCTACGTCAGTGGAAAGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCATCCGCAGTGCAGTAATCTA..............2611.00100000010000
..AGGTCCAATCAGAGTGCTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
GAAGGTCCAATCAGAGTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCATCCGCAGTGCAGTA...................1911.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACCTGCAACGTCATCCGCAGC.........................2611.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGTAATCTACGTCAGTGG.....2211.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGTGCAGTAATCTACGTCAGTGGAAA..2911.00100000010000
..................................................GTTAGTATGG-GACAATTTATACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.........ATCAGAGTGCTTTGCGTTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCGCAGTGCAGTAATCTA..............2111.00101000000000
...GGTCCAATCAGAGTGCTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
droEug1
GTAGGTCCAATCAGAGCGCGCTGCGCTTCTTTAACACTCACCAACTAAAGGTAAGTAATG-TTGTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAT------ATT-------------------------------------CCCGTC---------------------TTACTGTGATAACGATAAA--------TTGAAAT----------------------------------------TTT-------------------------------------------------------------------------CA------A-------------------------------------------ATCTTTTATTTTCTAGTGCAATCTACAACGTCATCCCCAGTGTACCAATCTGCGTCAATGGAAAGGSizeHit CountTotal NormTotal
No Reads
droBia1
GCAGGTCCAATCAGAGTGCACTGCGCTTCTTCAACACTCACCAGCTAAAGGTAAGTAGGA-ACCAATTAGTAGTAACTAGTT---------------A-----AAATCGTTGACTTAA-------GGGCAACATTGTCTTTGGGGTAGAATATTAAGTTGACAACAAGCA--TGTTGCAGGTGAAATATATACATACATCCTAAAAATGGATTTATAAGACAGTTTTGATGAGGCGCCC---------ACAAAATTTAATG---------------------TGTCCCACAAGC----------------CCATAGTT------------------------------------------------------------------GTTTTAGACG------------AGTGCCGCGTT-----------------TCATAATTGCTGTGATTATAAAATG------------------T------------------TCCTC-------------TATTTTTCTTCCCCAGTGCAACCTGCAGCGTCATCCTCAGTGCAGCAATCTTCGACAGTGGAAAGGSizeHit CountTotal NormTotal
No Reads
droTak1
TGAGTTA-AATAA---------------------------------------------AA----------------------------------------------------------------------------------------------------------------CAAAA-----------------------------------------------------AAT-----CAA---T-------------------------------------------------------------------------------------TTAA-TTCT-----------------------------------------------------------------------------------------------------------------------------------GACTAAAT----------------------TCT----AC----TTTTCTTTTATCAACAGTGCAACTTGCAGCGTCATCCGCAGTGCAGTAATCTGCGTCAGTGGAAGGGSizeHit CountTotal NormTotal
No Reads
droEle1
TAACTT---------------------------------------------------AAT-TGTT--------------------------------GATCC----------------------------------------------------GATTAAAAAATTAAAA--TAATG-----------------------------------------------------------------------------------------------------------------------------------------------------------AATTCCT---------------------------------------------------------------------------------------------------------------------------TTATTTTTGAC---ATTTAACTTAATGCATATTTTAAATTG-------------TTTTTATTCTCCAGTGCAACCTGCAGCGTCATCCGCAGTGCAGCAATCTGCGTCAGTGGAAGGGSizeHit CountTotal NormTotal
No Reads
droRho1
GCAGGTCCAATCAGAGTGCGCTGCGGTTCTTCAACACCCATCAACTGAAGGTAAGTAGAA-GGCAATCAACATCGA--------------------------------------------------------------------------------------------------------------------------TCCTTAAACTAAATT------------TAGATGAAACCATC---------TTAAAATTAAATATTAAAAAAATATTAAAAAATATTTCCATTAAAACCAACTCAATTGTATTTAA--------------------------ATGTG--ATCAGCCAATTAATATAATCTTTAACATTAACTAAATTGTTTTCGACTCATATTAATTAAAGTAATTCGTTTATATAAACAAGTAAACTCTTTATATCTATGATGTCTAAGTAAATTTA-------------------------------------------------AATTTGTATTTTCTAGTGCAACCTGCAACGTCACCCGCAGTGCAGCAATCTGCGTCAGTGGAAGGGSizeHit CountTotal NormTotal
No Reads
droFic1
GCAGGTCCAACCAGAGTGCGCTGCGGTTCTTCAACACCCACCAACTGAAGGTAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GGCGCTCCAACCAGAGTGCGTTGCGGTTCTTCAACACTCATCAGTTGAAGGTGAGCTTTTA-GCT------------------------------------------------------------------------------------------------GAGCTAAA--------------------------------------------------------------------------------------------------------------------------------------------------AATA-----------TAAATTCCCCCTTA--------------------------------------------------------------------------------------------------------------------------------AT--------------------------ACCAG---------TTTTTTCCTTTAACAGTGCAACCTGCAGCGCCATCCGCAGTGCAGTAACCTGCGTCAGTGGAAGGGSizeHit CountTotal NormTotal
No Reads
droAna3
GTCGTTCCAACCAGAGTGCGCTAAGGTTCTTCAACACTCACCAGTTAAAGGTCAGTTCTG-GGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTGT---------ATTTAATTTAT-----------------------------------------------------------------------------------------------------------------------------------GACTAAT----------CG-------------T---TTT-----TTTTTTTAATCCCCAGTGCAACCTTCAGCGTCATCCACAATGCAGCAATCTCCGCCAGTGGAAGGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........ACCAGAGTGCGCTAAGGTTCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAATGCAGCAATCTCCGCCAGT.......2411.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACCTTCAGCGTCATCCAC............................2311.001100000
...GTTCCAACCAGAGTGCGCTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.........ACCAGAGTGCGCTAAGGTTCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droBip1
GTCGTTCCAACCAAAGTGCGCTCAGGTTCTTCAACACTCACCAGCTGAAGGTCAGTAGGA-GGCAC--------------------------------AATCG----------------------------------------------------------TAT------TT-----------------------------------------------------------------------TAT----------------------------------------------------------------TCTAT----------------------TT-----------------------------------------------------------------------------------------------------------------------------------GACTAAC----------CG---------CTC-------------TCTTTACATCCCACAGTGCAACCTTCAGCGTCATCCACAATGCAGCAATCTCCGCCAGTGGAAGGGSizeHit CountTotal NormTotal
No Reads
dp5
GCAGATCCAATCAGAGCGCGTTGCGTTTCTTCAACACGCATCAGTTGAAGGTGAGTCTGGAGGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC----------------------------------------------------------------TCTTACTCG-----------TGGACCCCTTTGTA-----------------------------------------------------------------------------------------------------------------------------------A-----------------------TCCT-----------CCTTTTCTCTTTCCAGTGCAACTTGCAGCGCCACCCACAGTGCAGCAATCTGCGGCAATGGAAGGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....ATCCAATCAGAGCGCGTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
...GATCCAATCAGAGCGCGTTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...GATCCAATCAGAGCGCGTTGCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
........................GTTTCTTCAACACGCATCAGTTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
droPer2
GCAGATCCAATCAGAGCGCGTTGCGTTTCTTCAACACGCATCAGTTGAAGGTGAGTCTGGAGGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC----------------------------------------------------------------TCTTACTCG-----------TGGATCCCTTTGTA-----------------------------------------------------------------------------------------------------------------------------------A-----------------------TCCT-----------CCTTTTCTCTTTCCAGTGCAACTTGCAGCGCCACCCACAGTGCAGCAATCTGCGGCAATGGAAGGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCAACTTGCAGCGCCAC................................2011.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACTTGCAGCGCCACCCA.............................2111.001000100
droWil2
GCAGATCCAATCAGAGTGCATTGCGTTTCTTTAACACACATCAGCTGAAGGTAAGTGGGG-AGGACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGAT---------------------------------------------------------------------------AGTAGTATCGATAAACGATTCCT-----------------------------------------------------------------------------------------------------------------------------------AATTAAT--------------------------GGTTTTCCCCTTCTGTCTCTCGTTTAGTGTAATCTACAGCGTCATCCTCAGTGCAGTAATCTGCGTCAATGGAAAGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCGTCATCCTCAGTGCA......................2112.00201100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTACAGCGTCATCCTCAGTGC.......................2412.00201010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATCTACAGCGTCATCCTCAGTGCA......................2712.00200110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCGTCATCCTCAGTGCAGTAATC................2712.00202000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGTCATCCTCAGTGC.......................1811.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATCTGCGTCAATGGAA...1911.00101000
..AGATCCAATCAGAGTGCATTGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGTCATCCTCAGTGCA......................1911.00100010
...GATCCAATCAGAGTGCATTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...................ATTGCGTTTCTTTAACACACATCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACAGCGTCATCCTCAGTGCA......................2411.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTACAGCGTCATCCTCA...........................1911.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAATCTGCGTCAATGGAAA..2111.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACAGCGTCATCCTCAGTG........................2111.00100001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAATCTGCGTCAATGGA....1911.00100001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTACAGCGTCATCCTCAGTGCA......................2511.00101000
................................AACACACATCAGCTGAAGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.20100100
droVir3
GGCGCACCAATCAGAGCGCGCTACGCTTCTTCAATACGCATCAGCTGAAGGTGAGTTGCT-AGTT--------------------------------AATCCG----------------------------------------------------------GAG------CT-----------------------------------------------------------------------TAT----------------------------------------------------------------CCTCACCTA---------------------------------------------------------------------------------------------------------------------------------------------------------CTAAGT------------------TGTGT-------------TCTGTATCTGCTCCAGTGCAATCTGCAACGTCATCCGCAGTGCAGCAATCTGCGTCAATGGAAAGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................AGTT--------------------------------AATCCG----------------------------------------------------------GAG------CT-----------------------------------------------------------------------TAT----------------------------------------------------------------CCTCA.........................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
..............................TCAATACGCATCAGCTGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCATCCGCAGTGCAGCAATCTGC.............2511.001001000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTTGCT-AGTT--------------------------------AATCCG----------------------------------------------------------GAG------CT-----------------------------------------------------------------------T................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTCATCCGCAGTGCAGCA...................2011.001000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCATCCGCAGTGCAG.....................1911.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATCTGCAACGTCATCCGCA...........................2211.001000000000000001000000000000000000000000000000000000000000000000
........AATCAGAGCGCGCTACGCTTCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
..................................................GTGAGTTGCT-AGTT--------------------------------AATCCG----------------------------------------------------------GAG------CT-----------------------------------------------------------------------TA...............................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
GACGCACCAACCAGAGTGCACTACGTTTCTTTAACACCCATCAATTGAAGGTAAGTCGAT----------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------GAAGAGCCCCCCAAGGCAATT-------------------------------------CCCGTCAGC----------------TTTTACTTA-----------TGATCTCCT---------------------------------------------------------------------------------------------------------------------------CTG-------------------------------------------------CTTTTGCCATCTCCAGTGCAATCTGCAGCGTCATCCGCTGTGCACCAATCTGCGCCAGTGGAAGGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................ACTACGTTTCTTTAACACCCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.............................................................................................................................................................................................................................................................................................................................................TCTCCT---------------------------------------------------------------------------------------------------------------------------CTG-------------------------------------------------CTTTTGCCATCTCCAC..................................................2511.001000010
.............GAGTGCACTACGTTTCTTTAACACCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
droGri2
GTCGCACCAATCAGAGTGCTTTGCGTTTCTTCAATACGCATCAGTTGAAGGTCAGTTTGCAAGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT----------------------------------------------------------------CTTCACTTA---------AATTGCTTTCT-----------------------------------------------------------------------------------------------------------------------------------TATTAATT----------A------------TT----AT----TGTTTTGGCATTCGCAGTGCAATTTACAGCGTCATCCGCAGTGCAGCAATCTGCGCCAGTGGAAGGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......CCAATCAGAGTGCTTTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
......CCAATCAGAGTGCTTTGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCGTCATCCGCAGTGCAGCA...................2311.00110
.................................ATACGCATCAGTTGAAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33101

Generated: 05/19/2015 at 05:34 AM