ID:

dsi_1724

 Coordinate:

3l:4514-4614 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.2 -9.9 -9.2

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AAAAAAACTATATTTCGTCTTGGGTGTGCGGGAGTGGACATACGCTATATGTAAGTAGCAAGAACGAACATTTTTCCAGCAACTTGCAGCGATTCATTATCATCATAGTTGATAGTCAGAATTTAATTTACACAGCGTATTCACTTTCCAGGCCTCTTGATAGCTATTCTATCAATGTTTATCGTGCTAATGGTCTACCTT
*********************************************************((..............(((.....(((..((((.................))))..)))..))).............))***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 M024
male body
.............................................................................................................TGATAGTCAGAATTTAATTTACACAGC................................................................. 27 0 1 98.00 98 15 83 0 0 0 0 0 0
....AAACTATATTTCGTCTTGGGTG............................................................................................................................................................................... 22 0 1 62.00 62 33 29 0 0 0 0 0 0
....AAACTATATTTCGTCTTGGGT................................................................................................................................................................................ 21 0 1 52.00 52 41 10 0 1 0 0 0 0
....AAACTATATTTCGTCTTGGGTGT.............................................................................................................................................................................. 23 0 1 41.00 41 31 9 0 1 0 0 0 0
.............................................................................................................TGATAGTCAGAATTTAATTTACACAGCG................................................................ 28 0 1 21.00 21 3 17 0 0 0 1 0 0
.........................................................................................................................................TATTCACTTTCCAGGCCTCTTGATAGC..................................... 27 0 1 19.00 19 3 15 0 0 1 0 0 0
.........................................................GCAAGAACGAACATTTTTCCAGCAACT..................................................................................................................... 27 0 1 16.00 16 6 9 0 0 0 1 0 0
................................................................................................................TAGTCAGAATTTAATTTACACAGCGTA.............................................................. 27 0 1 13.00 13 10 2 0 0 0 1 0 0
....................TGGGTGTGCGGGAGTGGACATACGC............................................................................................................................................................ 25 0 1 12.00 12 0 0 12 0 0 0 0 0
...................................................................................................TCATCATAGTTGATAGTCAGAATT.............................................................................. 24 0 1 12.00 12 12 0 0 0 0 0 0 0
.............................................................................................................TGATAGTCAGAATTTAATTTACACAGCGTA.............................................................. 30 0 1 12.00 12 0 12 0 0 0 0 0 0
...................TTGGGTGTGCGGGAGTGGACATACGC............................................................................................................................................................ 26 0 1 11.00 11 0 0 11 0 0 0 0 0
.............................................................................................................TGATAGTCAGAATTTAATTTACACA................................................................... 25 0 1 11.00 11 5 6 0 0 0 0 0 0
.............................................................................................................TGATAGTCAGAATTTAATTTACACAG.................................................................. 26 0 1 11.00 11 2 9 0 0 0 0 0 0
.......................................................................................................................................................................TCTATCAATGTTTATCGTGCTAATGGTC...... 28 0 1 10.00 10 6 0 2 0 0 0 2 0
....AAACTATATTTCGTCTTGGGTGTGC............................................................................................................................................................................ 25 0 1 10.00 10 2 8 0 0 0 0 0 0
....AAACTATATTTCGTCTTGGGTGTG............................................................................................................................................................................. 24 0 1 9.00 9 6 3 0 0 0 0 0 0
......................................................................................................TCATAGTTGATAGTCAGAATTTAATT......................................................................... 26 0 1 9.00 9 3 1 1 0 1 0 3 0
.................................................................................................TATCATCATAGTTGATAGTCAGAATT.............................................................................. 26 0 1 7.00 7 7 0 0 0 0 0 0 0
..........................................................CAAGAACGAACATTTTTCCAGCAACT..................................................................................................................... 26 0 1 7.00 7 7 0 0 0 0 0 0 0
...........................................................................................................................TAATTTACACAGCGTATTCACTTTCCA................................................... 27 0 1 7.00 7 7 0 0 0 0 0 0 0
...................................................................................................................TCAGAATTTAATTTACACAGCGTA.............................................................. 24 0 1 6.00 6 5 1 0 0 0 0 0 0
..................................TGGACATACGCTATATGTAAGTAGCA............................................................................................................................................. 26 0 1 6.00 6 4 2 0 0 0 0 0 0
....AAACTATATTTCGTCTTGGG................................................................................................................................................................................. 20 0 1 6.00 6 6 0 0 0 0 0 0 0
..................................TGGACATACGCTATATGTAAGTAGCAAG........................................................................................................................................... 28 0 1 6.00 6 5 1 0 0 0 0 0 0
............................................................................................................................AATTTACACAGCGTATTCACTTTCCA................................................... 26 0 1 6.00 6 6 0 0 0 0 0 0 0
...................................................................................................TCATCATAGTTGATAGTCAGAATTTAA........................................................................... 27 0 1 5.00 5 3 0 0 2 0 0 0 0
................................................................................................................................TACACAGCGTATTCACTTTCCAGGCC............................................... 26 0 1 5.00 5 0 0 4 0 1 0 0 0
........................................TACGCTATATGTAAGTAGCAAGAACGAACA................................................................................................................................... 30 0 1 5.00 5 4 1 0 0 0 0 0 0
.............................................................................................................TGATAGTCAGAATTTAATTTACACAGCGT............................................................... 29 0 1 4.00 4 0 4 0 0 0 0 0 0
................................................................................................................TAGTCAGAATTTAATTTACACAGC................................................................. 24 0 1 4.00 4 4 0 0 0 0 0 0 0
...................................................TAAGTAGCAAGAACGAACATTTTT.............................................................................................................................. 24 0 1 4.00 4 3 1 0 0 0 0 0 0
...........................................................AAGAACGAACATTTTTCCAGCAACT..................................................................................................................... 25 0 1 4.00 4 3 1 0 0 0 0 0 0
.......................................................................................................................................................................TCTATCAATGTTTATCGTGCTAATGG........ 26 0 1 4.00 4 2 2 0 0 0 0 0 0
........................................................AGCAAGAACGAACATTTTTCCAGCAACT..................................................................................................................... 28 0 1 4.00 4 1 1 0 1 1 0 0 0
...................................................................................................TCATCATAGTTGATAGTCAGA................................................................................. 21 0 1 4.00 4 4 0 0 0 0 0 0 0
.............................................................................................................TGATAGTCAGAATTTAATTTACACAGA................................................................. 27 1 1 4.00 4 1 3 0 0 0 0 0 0
......................................................................................................TCATAGTTGATAGTCAGAATTTAAT.......................................................................... 25 0 1 4.00 4 2 0 1 0 0 1 0 0
.............................................................................................TCATTATCATCATAGTTGATAGTCAGA................................................................................. 27 0 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................................................................TATTCTATCAATGTTTATCGTGCA............. 24 1 1 3.00 3 0 3 0 0 0 0 0 0
.................................................................................................TATCATCATAGTTGATA....................................................................................... 17 0 1 3.00 3 3 0 0 0 0 0 0 0
..........................TGCGGGAGTGGACATACGCTATATGT..................................................................................................................................................... 26 0 1 3.00 3 0 0 3 0 0 0 0 0
...........ATTTCGTCTTGGGTGTGCGGGA........................................................................................................................................................................ 22 0 1 3.00 3 3 0 0 0 0 0 0 0
.............................................TATATGTAAGTAGCAAGAACGAACA................................................................................................................................... 25 0 1 3.00 3 2 0 0 0 1 0 0 0
............................................CTATATGTAAGTAGCAAGAACGAACA................................................................................................................................... 26 0 1 3.00 3 2 0 1 0 0 0 0 0
......................................................................TTTTTCCAGCAACTTGCAGCGATTCA......................................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0 0 0
...........................................................................................................................................TTCACTTTCCAGGCCTCTTGATAGC..................................... 25 0 1 3.00 3 1 1 0 0 0 1 0 0
......................................................GTAGCAAGAACGAACATTTTTCCAG.......................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0 0 0
.....AACTATATTTCGTCTTGGGTG............................................................................................................................................................................... 21 0 1 3.00 3 2 0 0 1 0 0 0 0
....................................................................................................................................................................TATTCTATCAATGTTTATCGTGCTA............ 25 0 1 3.00 3 1 2 0 0 0 0 0 0
...................................................TAAGTAGCAAGAACGAACATTTT............................................................................................................................... 23 0 1 3.00 3 3 0 0 0 0 0 0 0
...................................................................................................TCATCATAGTTGATAGTCAGAATTTA............................................................................ 26 0 1 3.00 3 3 0 0 0 0 0 0 0
...................................................................................TTGCAGCGATTCATTATCATCATAGT............................................................................................ 26 0 1 3.00 3 2 0 1 0 0 0 0 0
................................................................................................................................................................TAGCTATTCTATCAATGTTTATCGTGC.............. 27 0 1 3.00 3 1 1 1 0 0 0 0 0
....................................................................................................................................................................TATTCTATCAATGTTTATCGTGCTAA........... 26 0 1 3.00 3 2 0 0 1 0 0 0 0
...........................................................................................................................TAATTTACACAGCGTATTCACTTT...................................................... 24 0 1 3.00 3 0 0 3 0 0 0 0 0
................................................................................................................................TACACAGCGTATTCACTTTCCAGGC................................................ 25 0 1 3.00 3 1 0 2 0 0 0 0 0
.....................................................................................................ATCATAGTTGATAGTCAGAATTTAATT......................................................................... 27 0 1 3.00 3 1 1 0 0 1 0 0 0
.............................................................GAACGAACATTTTTCCAGCAACT..................................................................................................................... 23 0 1 3.00 3 0 3 0 0 0 0 0 0
............................................................................................................TTGATAGTCAGAATTTAATTTACACAGC................................................................. 28 0 1 3.00 3 2 1 0 0 0 0 0 0
....AAACTATATTTCGTCTTGGGTGTGCGG.......................................................................................................................................................................... 27 0 1 3.00 3 2 1 0 0 0 0 0 0
AAAAAAACTATATTTCGTCTTGGGTG............................................................................................................................................................................... 26 0 1 2.00 2 1 1 0 0 0 0 0 0
AAAAAAACTATATTTCGTCTTGGGT................................................................................................................................................................................ 25 0 1 2.00 2 1 1 0 0 0 0 0 0
..........................................................................TCCAGCAACTTGCAGCGATTCATTA...................................................................................................... 25 0 1 2.00 2 1 0 0 1 0 0 0 0
..........................................................................................................................................................TCTTGATAGCTATTCTATCAATGTT...................... 25 0 1 2.00 2 1 0 1 0 0 0 0 0
...............................................................................................................................................................................TGTTTATCGTGCTAATGGTCTACCT. 25 0 1 2.00 2 1 0 1 0 0 0 0 0
..AAAAACTATATTTCGTCTTGGGTG............................................................................................................................................................................... 24 0 1 2.00 2 0 2 0 0 0 0 0 0
...........................................................................................................................................TTCACTTTCCAGGCCTCTTGAT........................................ 22 0 1 2.00 2 1 0 0 0 0 1 0 0
.......................................................................................AGCGATTCATTATCATCATAGTTGA......................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0
.............................................................................................................TGATAGTCAGAATTTAATTTACAC.................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0
..................................TGGACATACGCTATATGTAAGTAGC.............................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0
......................TGTGTGCGGGAGTGGACATACGC............................................................................................................................................................ 23 1 1 2.00 2 0 0 2 0 0 0 0 0
...........................................................................................................................................................................TCAATGTTTATCGTGCTAATGGTC...... 24 0 1 2.00 2 1 0 1 0 0 0 0 0
...........................................................................................................................TAATTTACACAGCGTATTCACTTTCC.................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0
.......CTATATTTCGTCTTGGGTGTG............................................................................................................................................................................. 21 0 1 2.00 2 0 2 0 0 0 0 0 0
.AAAAAACTATATTTCGTCTTGGGTG............................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0
.....AACTATATTTCGTCTTGGGTGTG............................................................................................................................................................................. 23 0 1 2.00 2 0 2 0 0 0 0 0 0
............................................CTATATGTAAGTAGCAAGAACGAAC.................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0
........TATATTTCGTCTTGGGTGTGCGGGA........................................................................................................................................................................ 25 0 1 2.00 2 2 0 0 0 0 0 0 0
........................................TACGCTATATGTAAGTAGCAAGAACGA...................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0 0 0 0
...........................................................................................................................................................................TCAATGTTTATCGTGCTAATGGTCTACC.. 28 0 1 2.00 2 0 0 2 0 0 0 0 0
...................................................................................TTGCAGCGATTCATTATCATCATA.............................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0
.........................................................GCAAGAACGAACATTTTTCCAGC......................................................................................................................... 23 0 1 2.00 2 1 0 1 0 0 0 0 0
...............................................................................................................................................................................TGTTTATCGTGCTAATGGTCTA.... 22 0 1 2.00 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................TATCAATGTTTATCGTGCTAATGGTC...... 26 0 1 2.00 2 1 0 1 0 0 0 0 0
...............................................................................................ATTATCATCATAGTTGATAGTCAGAATT.............................................................................. 28 0 1 2.00 2 2 0 0 0 0 0 0 0
.............................................................................................................TGATAGTCAGAATTTAATTTACA..................................................................... 23 0 1 2.00 2 1 1 0 0 0 0 0 0
.........................................................GCAAGAACGAACATTTTTCCAGCAA....................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0
.........................................................................................................................................TATTCACTTTCCAGGCCTCTTGATAG...................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0
......................................................................TTTTTCCAGCAACTTGCAGCGATT........................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0
..........TATTTCGTCTTGGGTGTGCGGGA........................................................................................................................................................................ 23 0 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................TATTCTATCAATGTTTATCGTG............... 22 0 1 2.00 2 1 1 0 0 0 0 0 0
..........................TGCGGGAGTGGACATACGCTATATGTA.................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0
...................................................................................................TCATCATAGTTGATAGTCAGAATTTAAT.......................................................................... 28 0 1 2.00 2 1 1 0 0 0 0 0 0
..........TATTTCGTCTTGGGTGTGCGG.......................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
......ACTATATTTCGTCTTGGGTGT.............................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................TATCAATGTTTATCGTGCTAATGG........ 24 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................TGGACATACGCTATATGTAAGTAGCAA............................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...................TTGGGTGTGCGGGAGTGGACATACG............................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0
.................................................TGTAAGTAGCAAGAACGAACATTTT............................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................TCATAGTTGATAGTCAGAATTTA............................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0
....AAACTATATTTCGTCGTGGG................................................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................TTAATTTACACAGCGTATTCACTTTCCA................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
....AAACTATATTTCGTCTTGGGTGTGCGGGA........................................................................................................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................GTAGCAAGAACGAACATTTTTCCAGC......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................TTATCATCATAGTTGATAGTCAGAA................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0
.............................................TATATGTAAGTAGCAAGAACGAAA.................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................TTATCATCATAGTTGATAGTCAGC................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................TCATAGTTGATAGTCAGAAT............................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................TCCAGCAACTTGCAGCGATTCATT....................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
....................TGGGTGTGCGGGAGTGGACATACG............................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0
.............TTCGTCTTGGGTGTGCGGGAGTGGT................................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................ATCATCATAGTTGATAGTC.................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0
.................TCTTGGGTGTGCGGGAGTGGACA................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 1 0 0
...................................................................................TTGCAGCGATTCATTAT..................................................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0
....................................................AAGTAGCAAGAACGAACATT................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................................CACAGCGTATTCACTTTCCAGGC................................................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0
........................................................................................................................................GTATTCACTTTCCAGGCCTCTTGA......................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................TTGCAGGGATTCATTGTCATCATAGT............................................................................................ 26 2 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................TTCTATCAATGTTTATCGTGCTAATGG........ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................TTTTTCCAGCAACTTGCAGCG.............................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................TTATCGTGCTAATGGTC...... 17 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................GTCAGAATTTAATTTACACAGCGTA.............................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................AACATTTTTCCAGCAACTTGCAGCGA............................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................TAGTTGATAGTCAGAA................................................................................ 16 0 1 1.00 1 0 0 1 0 0 0 0 0
.........................................................GCAAGAACGAACATTTTTCCAGCA........................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................GCAAGAACGAACATTTTTCCAGCAAC...................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................ATAGTCAGAATTTAATTTACACAG.................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0
.............................................................................................................TGATAGTCAGAATTTAATTTACACAGCGA............................................................... 29 1 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................TCATCATAGTTGATAGTCAGAAAAA............................................................................. 25 3 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................ATAGTCAGAATTTAATTTACACAGCGTA.............................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................AGTCAGAATTTAATTTACACAGCGTAT............................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................................................TCCAGGCCTCTTGATAGCTAT.................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................TATCAATGTTTATCGTGCTAATGGTCT..... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
........................TGTGCGGGAGTGGACATACGCTA.......................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0
................................AGTGGACATACGCTATATGTAAGTAGAA............................................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TCTATCAATGTTTATCGTGCTAAA.......... 24 1 1 1.00 1 0 0 0 0 0 1 0 0
........................................................AGCAAGAACGAACATT................................................................................................................................. 16 0 1 1.00 1 0 0 1 0 0 0 0 0
...................TTGGGTGTGCGGGAGTGGACATACGCTA.......................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0
...........ATTTCGTCTTGGGTGTGCGGGAGTG..................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................TGATAGTCAGAATTTAA........................................................................... 17 0 1 1.00 1 0 1 0 0 0 0 0 0
.....AACTATATTTCGTCTTGGGTGTGC............................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................................................ATTTAATTTACACAGCGTA.............................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0
...........ATTTCGTCTTGGGTGTGCGGGAGT...................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TCTATCAATGTTTATCGTGCA............. 21 1 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................TCATCATAGTTGATAGTCAGAATTTAATT......................................................................... 29 0 1 1.00 1 0 0 0 0 0 1 0 0
....................................................................................................................................CAGCGTATTCACTTTCCAGGCCTCTTGA......................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................................TAGTTGATAGTCAGAATT.............................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0
...................................................................................................................TCAGAATTTAATTTATACAGCGTA.............................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................CAGCGTATTCACTTTCCAGGCCTCT............................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................................................GATAGTCAGAATTTAATT......................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................TGGACATACGCTATATGTAAGTAGTA............................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0
........................................................AGCAAGAACGAACATTTTTCCAGC......................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................TTCCAGGCCTCTTGATAGCTATTC................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................TCCAGCAACTTGCAGCGATTCA......................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0
...............................................................................................................................................................................TGTTTATCGTGCTAATGGTCTACC.. 24 0 1 1.00 1 1 0 0 0 0 0 0 0
........................TGTGCGGGAGTGGACATACGCTATA........................................................................................................................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0
....................TGGGTGTGCGGGAGTGGACATACGCTA.......................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0
.........ATATTTCGTCTTGGGTGTGC............................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0
...............................................................................................................TGATTCAGAATTTAATTTACACAGCGT............................................................... 27 3 1 1.00 1 0 1 0 0 0 0 0 0
..................................TGGACATACGCTATATGTAAGTAGAAAG........................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TCTATCAATGTTTATCGTGC.............. 20 0 1 1.00 1 0 1 0 0 0 0 0 0
..AAAAACTATATTTCGTCTTGGGTGT.............................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................TATATGTAAGTAGCAAGAACG....................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................TTTACACAGCGTATTCACTTTCCAGGC................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...........ATTTCGTCTTGGGTGTGCGGGAGTGG.................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................TATATGTAAGTAGCAAGAACGAAC.................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................TTTATCGTGCTAATGGT....... 17 0 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................................TCATAGTTGATAGTCAGA................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0
................................................................................................................................TACACAGCGTATTCACTTTCCAGGCCTCT............................................ 29 0 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................................................................AGATAGTCAGAATTTAATTTACACAGC................................................................. 27 1 1 1.00 1 0 1 0 0 0 0 0 0
....AAACTATATTTCGTCTTGG.................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................ATAGTCAGAATTTAATTCACACAGC................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................AATGTTTATCGTGCTAATGGTCTACCT. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.AAAAAACTATATTTCGTCTTG................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
.............................................TATATGTAAGTAGCAAGAACGAA..................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0
..................................................................................................................................................................................TTATCGTGCTAATGGTCTACCTT 23 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................TAAGTAGCAAGAACGAACATTTTTCCAGC......................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................................................................GTATTCACTTTCCAGGCCTCTTGATAGCTA................................... 30 0 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................................................................................ATTTACACAGCGTATTCACTTTCCA................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................CGCTATATGTAAGTAGCAAGAACGAACA................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.AAAAAACTATATTCCGTCTTGGGTGT.............................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................TATTCACTTTCCAGGCCTCTTGAT........................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0
....AAACTATATTTCGTCTTGGGGGT.............................................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................TAGTTGATAGTCAGAATTTAATTTACAC.................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................TCATAGTTGATAGTCAGAATTTTAAA......................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0
.........ATATTTCGTCTTGGGTGTGCGG.......................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
........TATATTTCGTCTTGGGTGTGCGG.......................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................TCATCATAGTTGATAGTCAGAAA............................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................AGCGATTCATTATCATCATAGTTGATA....................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................TAATTTACACAGCGTATTCAC......................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
....................................................................................TGCAGCGATTCATTATCATCATAGT............................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0
...........................................................................................................................TAATTTACACAGCGTATTCACTTTCCAGGC................................................ 30 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................TCTATCAATGTTTATCGTGCTAATGGTCA..... 29 1 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TCTATCAATGTTTATCGTGAA............. 21 2 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................TTATAGTTGATAGTCAGAA................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................ATTCATTTTCCAGGCCTCTTGATAGC..................................... 26 1 1 1.00 1 0 0 0 0 1 0 0 0
..................................TGGACATACGCTATATGTAAGTA................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................TTGATTTACACAGCGTATT............................................................ 19 1 1 1.00 1 0 0 1 0 0 0 0 0
..............................................................................................................................TTTACACAGCGTATTCACTTTCCAGGCC............................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................AATTTACACAGCGTATTCACTTTCCAGG................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TCTATCAATGTTTATCGTGCTAATGGTCT..... 29 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................CACAGCGTATTCACTTTCCAGGCC............................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0
.....................................................................................................ATCATAGTTGATAGTCAGAATT.............................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................CAATGTTTATCGTGCTAATGGTCTACC.. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................GAACGAACATTTTTCCAGCAACTTGC.................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................GTGTGCGGGAGTGGACAT................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................ATATGTAAGTAGCAAGAACGAACAC.................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0
......ACTATATTTCGTCTTGGGTGTGC............................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................................TTACACAGCGTATTCACTTTCCAGGCC............................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................CAACTTGCAGCGATTCATTATCATC................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0
....................................................................................TGCAGCGATTCATTATCA................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0
................................................................................AACTTGCAGCGATTCATTATCATC................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0
...............................................................................................................................TTACACAGCGTATTCACTTTCCAGGC................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0
...............................................TATGTAAGTAGCAAGAACGAACA................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0
...........................................................................................................GTTGATAGTCAGAATT.............................................................................. 16 0 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................................AGCAACTTGCAGCGATTCATT....................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................................................................................................TTCTATCAATGTTTATCGTGCTAA........... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................TCATAGTTGATAGTCAGAATT.............................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
....AAACTATATTTCGTCTTGGGTGTGCG........................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0
.............................................................................................................TGATAGTCAGAATTTAATTTTCACAGCG................................................................ 28 1 1 1.00 1 0 1 0 0 0 0 0 0
...........ATTTCGTCTTGGGTGTGCGGG......................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................TGATAGTGAGAATTTAATTTACACAG.................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0
................................................................................................TTATCATCATAGTTGATAGTCAGAATT.............................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.........ATATTTCGTCTTGGGT................................................................................................................................................................................ 16 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................TCCAGCAACTTGCAGCGATTCATTATC.................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0
........................................................................................................................................GTATTCACTTTCCAGGCCTCTTGAT........................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................TGCAGCGATTCATTATCATCATAGTTGA......................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................GTAGCAAGAACGAACATTTTTCCAGCA........................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...................TTGGGTGTGCGGGAGTGGACATACGCC........................................................................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................ATGTTTATCGTGCTAATGGTC...... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................................TCATAGTTGATAGTCAGAAA............................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0
.................................................TGTAAGTAGCAAGAACGAACATTT................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0
...................TTGGGTGTGCGGGAGTGGAC.................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0
.................................................................................................................................................TTCCAGGCCTCTTGATA....................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0
................................................................................AACTTGCAGCGATTCATTATCATCA................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0
.........................................................................................................................................TATTCACTTTCCAGGCCTCTTGATA....................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................ATCATCATAGTTGATAGTCAGAATTTAA........................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................AAGAACGAACACTTTTCCAGCACCTTGC.................................................................................................................. 28 2 1 1.00 1 0 0 0 0 0 0 1 0
............................................................................................................................AATTTACACAGCGTATTCACTTT...................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................TTCTATCAATGTTTATCGTGC.............. 21 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................TTCCAGCAACTTGCAGCG.............................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0
................................................................................................................TAGTCAGAATTTAATTTACACAGCGT............................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0
........TATATTTCGTCTTGGGTGTG............................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0
...................TTGGGTGTGCGGGAGTGGACATAC.............................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0
....................................................................................................................................CAGCGTATTCACTTTCCAGG................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0
...................................................................................................TCATCATAGTTGATAGTCAGAAT............................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................TATGTAAGTAGCAAGAACGAACATTTT............................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0
.................TCTTGGGTGTGCGGGAGTGGACATA............................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..........TATTTCGTCTTGGGTGTGCGGGAGTGGAA.................................................................................................................................................................. 29 1 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................TTTTTCCAGCAACTTGCAGCGT............................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................TGATAGTCAGAATATAATTTACACAGCG................................................................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................TAGTCAGAATTTAATTTACACAGCGTATT............................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................TATATGTAAGTAGCAAGAACGA...................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................TGTAAGTAGCAAGAACG....................................................................................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0
..GAAAACTATATTTCGTCTTGGGTGTGCG........................................................................................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0
.....................................................................................................ATCATAGTTGATAGTCAGAATTTAAT.......................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................TTCTATCAATGTTTATCGTGCTAATGGTC...... 29 0 1 1.00 1 0 1 0 0 0 0 0 0
...................TTGGGTGTGCGGGAGT...................................................................................................................................................................... 16 0 2 0.50 1 0 0 1 0 0 0 0 0
..................CTTGGGTGTGCGGGAGTG..................................................................................................................................................................... 18 0 2 0.50 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................CAATGTTGATCGTGCGAACG......... 20 3 4 0.25 1 0 0 0 0 0 0 0 1
................................................................................................................TAGTCAGAATTTAAT.......................................................................... 15 0 4 0.25 1 0 0 1 0 0 0 0 0
...................TTGGGCGTGCCGGAGTGG.................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 1 0 0 0 0
................................................................................AACTTGCAGCGATTC.......................................................................................................... 15 0 5 0.20 1 0 0 1 0 0 0 0 0
..............................................ATATGTAAACAGTAAGAACGA...................................................................................................................................... 21 3 5 0.20 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................TCTATCAATGTTTATCGTAAA............. 21 3 8 0.13 1 0 1 0 0 0 0 0 0
.................TTTTGGGTGTGCGGGA........................................................................................................................................................................ 16 1 9 0.11 1 0 0 1 0 0 0 0 0
............................CCGGAGTGGACATACC............................................................................................................................................................. 16 2 20 0.05 1 1 0 0 0 0 0 0 0
...........................................GCTATATGAAAGTAGTA............................................................................................................................................. 17 2 20 0.05 1 0 0 1 0 0 0 0 0

Anti-sense strand reads

TTTTTTTGATATAAAGCAGAACCCACACGCCCTCACCTGTATGCGATATACATTCATCGTTCTTGCTTGTAAAAAGGTCGTTGAACGTCGCTAAGTAATAGTAGTATCAACTATCAGTCTTAAATTAAATGTGTCGCATAAGTGAAAGGTCCGGAGAACTATCGATAAGATAGTTACAAATAGCACGATTACCAGATGGAA
*****************************************************************((..............(((.....(((..((((.................))))..)))..))).............))********************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
............................................................................................................................................................................GTTACAAATAGCACGATTACCAGAT.... 25 0 1 17.00 17 13 2 2 0 0 0
..........................................................................................................................................................................TAGTTACAAATAGCACGATTACCAGAT.... 27 0 1 8.00 8 7 1 0 0 0 0
..............................................................................CGTTGAACGTCGCTAAGTAATAGTA.................................................................................................. 25 0 1 8.00 8 2 4 2 0 0 0
..............AGCAGAACCCACACGCCCTCACCTGT................................................................................................................................................................. 26 0 1 8.00 8 7 1 0 0 0 0
......................................................................................................................................CGCATAAGTGAAAGGTCCGGAGAACTAT....................................... 28 0 1 6.00 6 5 0 1 0 0 0
.............................................................................................................................................................................TTACAAATAGCACGATTACCAGAT.... 24 0 1 4.00 4 2 1 1 0 0 0
............................................................................................................................TTAAATGTGTCGCATAAGTGAAAGGT................................................... 26 0 1 4.00 4 1 3 0 0 0 0
......................................................................AAAAAGGTCGTTGAACGTCGCTAAGT......................................................................................................... 26 0 1 4.00 4 0 4 0 0 0 0
....................................................................................................................................................................ATAAGATAGTTACAAATAGCACGA............. 24 0 1 3.00 3 0 3 0 0 0 0
..................................................................................................................................................................CGATAAGATAGTTACAAATAGCACGATT........... 28 0 1 3.00 3 0 2 1 0 0 0
......................................................................................................................................CGCATAAGTGAAAGGTCCGGAGAACT......................................... 26 0 1 3.00 3 2 1 0 0 0 0
.............................................................................................................ACTATCAGTCTTAAATTAAATGTGT................................................................... 25 0 1 3.00 3 0 3 0 0 0 0
..................................................................TTGTAAAAAGGTCGTTGAACGTCGC.............................................................................................................. 25 0 1 2.00 2 1 1 0 0 0 0
..................................................................................................TAGTAGTATCAACTATCAGTCTT................................................................................ 23 0 1 2.00 2 1 1 0 0 0 0
.............................................................................................................ACTATCAGTCTTAAATTAAATGTG.................................................................... 24 0 1 2.00 2 0 2 0 0 0 0
................................................................................................AATAGTAGTATCAACTATCAGTC.................................................................................. 23 0 1 2.00 2 0 2 0 0 0 0
................................................................................................................ATCAGTCTTAAATTAAATGTGTCGC................................................................ 25 0 1 2.00 2 0 2 0 0 0 0
...........................................................................................................................................................................AGTTACAAATAGCACGATTACCAGAT.... 26 0 1 2.00 2 2 0 0 0 0 0
...........................................................................................................................................AAGTGAAAGGTCCGGAGAACTAT....................................... 23 0 1 2.00 2 1 1 0 0 0 0
........................................................................................................TATCAACTATCAGTCTTAAATTAAAT....................................................................... 26 0 1 2.00 2 2 0 0 0 0 0
.....................................................................................................................................................................TAAGATAGTTACAAATAGCACGAT............ 24 0 1 2.00 2 0 2 0 0 0 0
...........................................................................................................CAACTATCAGTCTTAAATTAA......................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
..................................................................................GAACGTCGCTAAGTAATAGTAGTAT.............................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................................................CGATAAGATAGTTACAAATAGCACGAT............ 27 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................AAATGTGTCGCATAAGTGAAAGGT................................................... 24 0 1 1.00 1 0 0 1 0 0 0
.............................................................................................................TCTATCAGTCTTAAATTAAATGTGT................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................CGTCGCTAAGTAATAGTAGTATCA............................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................AGTGAAAGGTCCGGAGAACTATCG..................................... 24 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................TAAATGTGTCGCATAAGTGAAAGGT................................................... 25 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................AGATAGTTACAAATAGCACGATTACCAGAT.... 30 0 1 1.00 1 1 0 0 0 0 0
......................CCACACGCCCTCACCTGTATGCGATAT........................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0
................................................................................................AATAGTAGTATCAACTATCAGTCTTAAA............................................................................. 28 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................AAGTGAAAGGTCCGGAGAACTATC...................................... 24 0 1 1.00 1 1 0 0 0 0 0
..........................................................GTTCTTGCTTGTAAAAAGGTCG......................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................GTAATAGTAGTATCAACTATCAGTC.................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................AGTGAAAGGTCCGGAGAACTATCGATA.................................. 27 0 1 1.00 1 1 0 0 0 0 0
.........................................AGCGATATACATTCATCGTTCTTGCT...................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................................GTTACAAATAGCACGACTACCAGAT.... 25 1 1 1.00 1 1 0 0 0 0 0
...............................................................................GTTGAACGTCGCTAAGTAATA..................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................................GTTACAAACAGCACGATTACCAGAT.... 25 1 1 1.00 1 1 0 0 0 0 0
..............AGCAGAACCCACACGCCCTCACCTGTAT............................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................CAACTATCAGTCTTAAATTAAATGT..................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
........................................................................AAAGGTCGTTGAACGTCGCTAAGTAAT...................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................TGCATAAGTGAAAGGTCCGGAGAACTAT....................................... 28 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................AAGGTCCGGAGAACTATCGATAAGAT.............................. 26 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................TGAAAGGTCCGGAGAACTAT....................................... 20 0 1 1.00 1 0 1 0 0 0 0
...........................................CGATATACATTCATCGTTCTTGCTTGT................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
................................................................................TTGAACGTCGCTAAGTAATAGT................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.....................................................TCATCGTTCTTGCTTGTAAAAAGGT........................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................TTAAATTAAATGTGTCGCA............................................................... 19 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................CAAATAAGTGAAAGGTCCGGAGAACT......................................... 26 2 1 1.00 1 0 1 0 0 0 0
............................................................................................................................TTAAATGTGTCGCATAAGTGA........................................................ 21 0 1 1.00 1 0 0 0 0 1 0
.........................................................................................................................................ATAAGTGAAAGGTCCGGAGAACTAT....................................... 25 0 1 1.00 1 0 1 0 0 0 0
........................................................................................CGCTAAGTAATAGTAGTATCAACTAT....................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................AGTAGTATCAACTATCAGTCTTAAAT............................................................................ 26 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................ATGTGTCGCATAAGTGAAAGGTC.................................................. 23 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................................ATAGTTAGAAATAGCACGATTACCAGAT.... 28 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................................CAGTCTTAAATTAAATGTGTCGCAT.............................................................. 25 0 1 1.00 1 1 0 0 0 0 0
......................................................................................GTCGCTAAGTAATAGTAGTATCAACT......................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
............................................................................GTCGTTGAACGTCGCTAA........................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0
........................................................................................................................................................GGAGAACTATCGATAAG................................ 17 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................ATCAGTCTTAAATTAAATGTGTCGCAT.............................................................. 27 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................GAAAGGTCCGGAGAACTATCGATAAGAT.............................. 28 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................GCATAAGTGAAAGGTCCGGAGAACT......................................... 25 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................ATAACATAGTTACAAATAGCACGA............. 24 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................TAAGTAATAGTAGTATCAACTATCAGTC.................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0
...........................................CGATATACATTCATCGTTCTTGCT...................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.............................................................CTTGCTTGTAAAAAGGTCGTTGAAC................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................GATAGTTACAAATAGCACGATTACCA....... 26 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................AGACAGTTAGGAATAGCAC............... 19 3 17 0.06 1 0 1 0 0 0 0
................................................................................................................................ATGTGTCGTAGAAGTG......................................................... 16 2 20 0.05 1 0 0 1 0 0 0
................................................................................TTGCACTTCGCTAAGTA........................................................................................................ 17 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:4464-4664 + dsi_1724 AAAAAAACTATATTTCGTCTTGGGTGTGCGGGAGTGGACATACGCTATATGTAAGTAGCA-----AGAACGAACATTTTTCCAGCAACTTGCAG-CGATTCATTATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--TTAATTTACACAGCGTATTCACTTTCCAGGCCTCTTGATAGCTATTCTATCAATGTTTATCGTGCTAATGGTCTACCTT
droSec2 scaffold_2:60504-60704 + AAAAAAACTATATTTCGTCTTGGGTGTGCGGGAGTGGACATACGCTATATGTAAGTAGCA-----AGAACGAACATTTTTCCAGCAACTTGCAG-CGATTCATTATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--TTAATTTACACAGCGTATTCACTTTCCAGGCCTCTTGATAGCTATTCTATCAATGTTTATCGTGCTAATGGTCTACCTT
dm3 chr3L:24859-25138 + AGAAAAACTATATTTCGTCTTGGGGGTGCGGGAGTGGACATACGCCATATGTAAGTAGCA-----AGAGGAAACATTTTTCCAGCAACTTTCAG-CAATTCATTATCCCAAATATGCA--CAAT---------------------A-CTGTTTTCACAACAATA-------CATAAAAGTAATTGCTAAAGCACCAAAAAACAATCGATGATAGC-ATTAATA----GTTTGATAGTCAGAA----------------------T--TTAATTTACCCAGCGTATTCACTTTCCAGGTCTCTTGATAGCTATTCTATCAATGTTTATCGTGCTGATGGTCTACCTT
droEug1 scf7180000409184:353046-353333 - CGAGAAACTACACTTCGTGCTGGGCGTGCGGGAGTGGACCTACGCCATATGTGAGTAACC---------------------CAGCGATTAG--G------CGCAGTCACAAATATGCTTTCAATTTC-T-TCGAGG------------CGTTTTAAAAATAGTTCATCGCCCATAAAAGCAATTGCTAAAACAACAAGAGAAATCGGAGAGTGACGATTGATG----GTTTGATCGCCAGAGA---------TGGTCGCTCGCTCCG--AACTTATCCAGCTGGTTCTCTCTGCAGGTCTGCTGATTGCCATCCTATCCATGTTCATCGTGCTGATGGTCTACCTC
droBia1 scf7180000300910:390427-390741 - AGAAAAGCTCAATTTCGTTCTCGGGGTGCGGGAGTGGACCTACGCCATATGTGAGTAGCCCCAAGCAAACAAACATTTCTCCAGCGATTGG--G-CCATTCGCAATCACAAATATGCTTTCAATTTC-T-TCGGGG------------CTTTTTAAAAATAGTA---CGCTCATAAAAGCAATTGCTGAAACAACAAGAGAAAATCGCGAGTGACGATTGATACACAGTTTGATTGCCAGAGA---------TGATCTTTCGCTCCG--ATCTCATCCAGCCAATTCTCTCTGCAGGCCTCCTGATTGCGATACTGTCCATGTTTATTGTGCTGATCGTGTATCTC
droTak1 scf7180000415846:408554-408846 + AGAAAAGTTTCAATTTGTTCTCGGTGTGCGGGAATGGACCTACGCCATATGTGAGTAGCA-----AAC----ACATTTCTCCAGCATTTAG--CCCAATTCACAATCACAAATATTCTTTCGATTTC-TTCGGGGGCGAGAGTTTATAAA---TATAGATAGTA---CGCTCATAAAAGCAATTGCTAAAACAACAAGAGAAAATCGCAAGTGAAGATTGATA----CAT----------GGA---------TGATCTTTTGTTTTG--GATTT----------CTCTGTTTGCAGGCCTCTTGATTGCGATTCTGTCCATGTTTATTGTGCTGGTGGTCTACCTT
droEle1 scf7180000491249:412740-413032 - AGAGAAGCTACACTTTGTTTTGGGCGTGCGGGAATGGACCTACGCCATATGTGAGTAACA-----AAAACAAACA---------------------------CAATCACAAATATGCTTTCAATTTCAT-TCGGGGCAA--ATTTGTATGTTTTAAAAATAGTA---CGCTCATAAAAGTAATTACTGAAACAACAGAAGGAAATTGCGGGTGCCGAGTGATA----GTTTGATCGCAAGAAA---------TGATTTTTCGCTCCA--AATTTATCCAGCTGATTCTCTTTCCAGGCCTCTTGATTGCGATAATATCCATGTTTATTGTGCTAATGGTGTACCTG
droRho1 scf7180000768167:29367-29675 + AGAAAAGCTCCACTTTGTCTTGGGCGTGCGGGAATGGACCTACGCCATATGTGAGTACCA-----CAAACAAACATTTCTCCAATGATTAG--G-C------CAATCACAAATATGTTTTCAATTTCGT-TCGGGAAAA--AT--GTGTGTTTTAAAAATAGCA---CGCTCATAAAAGTAATTACCGAAACAACAGAAGGAAATTGCGGGCGCCGATTGATA----GTTTGATCGCGAGAAA---------TGATCTTTGGCTCCA--AATTTATCCAGCTGATTCTATTTGCAGGCCTCTTGATTGCGATAATATCCATGTTTATTGTGCTGATCGTGTACCTA
droFic1 scf7180000454105:439031-439245 - ACAAATGCT-------------------------------------------------------------------------------------------------------------TTCGATTTCAT-TCGAGGCAA--ATTTGTGCGTCTTAAAAATAGTA---CGCTCGTAAAAGTAATTGTTAGAATAACACAAGGAAATCGCGGGTGCCGATTGATA----TTTTGATCGTTAGCTA---------TGATCTTTTGCTCTC--AA-TTATCCAGCTGACTCTCTTGGCAGGCCTCCTCATCGCGATACTATCGATGTTCATCGTGCTGATGGTGTACCTC
droKik1 scf7180000301710:114373-114430 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTGCAGGTCTTTTGATCGCCATAATATCCATGTTTATTGTGCTAATGGTGTACCTG
droAna3 scaffold_13337:276409-276466 - AGAGAAGTTTCACTTTGTGCTGGGAGTGCGGGAATGGACCTACGCCATATGTAAGTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395155:488473-488553 + AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGATTTTGTTGGCCCTCCCACTCGATAGGTCTTCTGATCTCCATAATATCCATGTTTATTGTACTAATGGTGTATCTG
dp5 XR_group8:1218775-1219058 - CGAGAAGCTGCACTTTGTGCTGGGCGTCCGCGAGTGGACCTACGCCATCTGTGAGTGCTC-----CCACC------TCCTCC------TCC--G-CCGCACGCACTCATAAATATGTTTCCAAT-------------------------------ATAATAGTA---CGCTCATAAAAGTGATTGTTTGAATAACAAAAGTGAATTGCCTGTGGCGATTGATA----GATTAATGGCCCCAAAACAGAAGAGTCCTAACTCGCTCTC--T--CTTTCGCGTGCTTTCTCTTGGCAGGTCTCTTGATATCCATTATATCCATGGTCATTGTGCTGGTGGTGTACCTC
droWil2 scf2_1100000004540:1983675-1983730 + AGAGAAACTTCATTTCATATTGGGCACACGCGAATGGACCTATGCCATATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:3032009-3032062 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGCCTTCTGATCTGCATTATATCCATGTTCATCGTGCTGATCGTGCACCTG
droMoj3 scaffold_6654:914026-914081 + AGAGAAGCTTCGCTTTGTGCTGGGCGTCAGGGAGTGGACCTATGCTGTATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:3958820-3958887 - CACATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTTTCCTTAGGCCTTCTGATCTGCATTATATCGATGTTTATCGTATTGATTGTGCATTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAAAAAACTATATTTCGTCTTGGGTGTGCGGGAGTGGACATACGCTATATGTAAGTAGCA-----AGAACGAACATTTTTCCAGCAACTTGCAG-CGATTCATTATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--TTAATTTACACAGCGTATTCACTTTCCAGGCCTCTTGATAGCTATTCTATCAATGTTTATCGTGCTAATGGTCTACCTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................TGATAGTCAGAA----------------------T--TTAATTTACACAGC.................................................................27198.00980000000830150000000
....AAACTATATTTCGTCTTGGGTG................................................................................................................................................................................................................................................................................................................................22162.00620000000290330000000
....AAACTATATTTCGTCTTGGGT.................................................................................................................................................................................................................................................................................................................................21152.00520000000101410000000
....AAACTATATTTCGTCTTGGGTGT...............................................................................................................................................................................................................................................................................................................................23141.0041000000091310000000
......................................................................................................................................................................................................................................TGATAGTCAGAA----------------------T--TTAATTTACACAGCG................................................................28121.0021000000117030000000
..........................................................................................................................................................................................................................................................................................TATTCACTTTCCAGGCCTCTTGATAGC.....................................27119.0019000100015030000000
.........................................................GCA-----AGAACGAACATTTTTCCAGCAACT.................................................................................................................................................................................................................................................................27116.001600000019060000000
.........................................................................................................................................................................................................................................TAGTCAGAA----------------------T--TTAATTTACACAGCGTA..............................................................27113.0013000000120100000000
....................TGGGTGTGCGGGAGTGGACATACGC.............................................................................................................................................................................................................................................................................................................25112.0012000000000012000000
.........................................................................................................TC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--T..............................................................................24112.0012000000000120000000
......................................................................................................................................................................................................................................TGATAGTCAGAA----------------------T--TTAATTTACACAGCGTA..............................................................30112.0012000000012000000000
...................TTGGGTGTGCGGGAGTGGACATACGC.............................................................................................................................................................................................................................................................................................................26111.0011000000000011000000
......................................................................................................................................................................................................................................TGATAGTCAGAA----------------------T--TTAATTTACACA...................................................................25111.001100000006050000000
......................................................................................................................................................................................................................................TGATAGTCAGAA----------------------T--TTAATTTACACAG..................................................................26111.001100000009020000000
........................................................................................................................................................................................................................................................................................................................TCTATCAATGTTTATCGTGCTAATGGTC......28110.001000200000062000000
....AAACTATATTTCGTCTTGGGTGTGC.............................................................................................................................................................................................................................................................................................................................25110.001000000008020000000
....AAACTATATTTCGTCTTGGGTGTG..............................................................................................................................................................................................................................................................................................................................2419.00900000003060000000
................................................................................................................................................................................................................TCATAG---------------TTGATAGTCAGAA----------------------T--TTAATT.........................................................................2619.00900310001031000000
.......................................................................................................TATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--T..............................................................................2617.00700000000070000000
..........................................................CA-----AGAACGAACATTTTTCCAGCAACT.................................................................................................................................................................................................................................................................2617.00700000000070000000
............................................................................................................................................................................................................................................................................TAATTTACACAGCGTATTCACTTTCCA...................................................2717.00700000000070000000
............................................................................................................................................................................................................................................TCAGAA----------------------T--TTAATTTACACAGCGTA..............................................................2416.00600000001050000000
..................................TGGACATACGCTATATGTAAGTAGCA-----.........................................................................................................................................................................................................................................................................................2616.00600000002040000000
....AAACTATATTTCGTCTTGGG..................................................................................................................................................................................................................................................................................................................................2016.00600000000060000000
..................................TGGACATACGCTATATGTAAGTAGCA-----AG.......................................................................................................................................................................................................................................................................................2816.00600000001050000000
.............................................................................................................................................................................................................................................................................AATTTACACAGCGTATTCACTTTCCA...................................................2616.00600000000060000000
.........................................................................................................TC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--TTAA...........................................................................2715.00500000000230000000
.................................................................................................................................................................................................................................................................................TACACAGCGTATTCACTTTCCAGGCC...............................................2615.00500010000004000000
........................................TACGCTATATGTAAGTAGCA-----AGAACGAACA...............................................................................................................................................................................................................................................................................3015.00500000001040000000
......................................................................................................................................................................................................................................TGATAGTCAGAA----------------------T--TTAATTTACACAGCGT...............................................................2914.00400000004000000000
.........................................................................................................................................................................................................................................TAGTCAGAA----------------------T--TTAATTTACACAGC.................................................................2414.00400000000040000000
...................................................TAAGTAGCA-----AGAACGAACATTTTT..........................................................................................................................................................................................................................................................................2414.00400000001030000000
...........................................................A-----AGAACGAACATTTTTCCAGCAACT.................................................................................................................................................................................................................................................................2514.00400000001030000000
........................................................................................................................................................................................................................................................................................................................TCTATCAATGTTTATCGTGCTAATGG........2614.00400000002020000000
........................................................AGCA-----AGAACGAACATTTTTCCAGCAACT.................................................................................................................................................................................................................................................................2814.00400010001110000000
.........................................................................................................TC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGA.........................................................................................................2114.00400000000040000000
......................................................................................................................................................................................................................................TGATAGTCAGAA----------------------T--TTAATTTACACAGA.................................................................2714.00400000003010000000
................................................................................................................................................................................................................TCATAG---------------TTGATAGTCAGAA----------------------T--TTAAT..........................................................................2514.00400000010021000000
...................................................................................................TCATTATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGA.........................................................................................................2713.00300000000030000000
.....................................................................................................................................................................................................................................................................................................................TATTCTATCAATGTTTATCGTGCA.............2413.00300000003000000000
.......................................................................................................TATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATA...............................................................................................................1713.00300000000030000000
..........................TGCGGGAGTGGACATACGCTATATGT......................................................................................................................................................................................................................................................................................................2613.00300000000003000000
...........ATTTCGTCTTGGGTGTGCGGGA.........................................................................................................................................................................................................................................................................................................................2213.00300000000030000000
.............................................TATATGTAAGTAGCA-----AGAACGAACA...............................................................................................................................................................................................................................................................................2513.00300010000020000000
............................................CTATATGTAAGTAGCA-----AGAACGAACA...............................................................................................................................................................................................................................................................................2613.00300000000021000000
...........................................................................TTTTTCCAGCAACTTGCAG-CGATTCA....................................................................................................................................................................................................................................................2613.00300000000030000000
............................................................................................................................................................................................................................................................................................TTCACTTTCCAGGCCTCTTGATAGC.....................................2513.00300000011010000000
......................................................GTAGCA-----AGAACGAACATTTTTCCAG......................................................................................................................................................................................................................................................................2513.00300000000030000000
.....AACTATATTTCGTCTTGGGTG................................................................................................................................................................................................................................................................................................................................2113.00300000000120000000
.....................................................................................................................................................................................................................................................................................................................TATTCTATCAATGTTTATCGTGCTA............2513.00300000002010000000
...................................................TAAGTAGCA-----AGAACGAACATTTT...........................................................................................................................................................................................................................................................................2313.00300000000030000000
.........................................................................................................TC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--TTA............................................................................2613.00300000000030000000
........................................................................................TTGCAG-CGATTCATTATC----------------------------------------------------------------------------------------------------ATCATAG---------------T....................................................................................................................2613.00300000000021000000
.................................................................................................................................................................................................................................................................................................................TAGCTATTCTATCAATGTTTATCGTGC..............2713.00300000001011000000
.....................................................................................................................................................................................................................................................................................................................TATTCTATCAATGTTTATCGTGCTAA...........2613.00300000000120000000
............................................................................................................................................................................................................................................................................TAATTTACACAGCGTATTCACTTT......................................................2413.00300000000003000000
.................................................................................................................................................................................................................................................................................TACACAGCGTATTCACTTTCCAGGC................................................2513.00300000000012000000
...............................................................................................................................................................................................................ATCATAG---------------TTGATAGTCAGAA----------------------T--TTAATT.........................................................................2713.00300010001010000000
..................................................................GAACGAACATTTTTCCAGCAACT.................................................................................................................................................................................................................................................................2313.00300000003000000000
.....................................................................................................................................................................................................................................TTGATAGTCAGAA----------------------T--TTAATTTACACAGC.................................................................2813.00300000001020000000
....AAACTATATTTCGTCTTGGGTGTGCGG...........................................................................................................................................................................................................................................................................................................................2713.00300000001020000000
AAAAAAACTATATTTCGTCTTGGGTG................................................................................................................................................................................................................................................................................................................................2612.00200000001010000000
AAAAAAACTATATTTCGTCTTGGGT.................................................................................................................................................................................................................................................................................................................................2512.00200000001010000000
...............................................................................TCCAGCAACTTGCAG-CGATTCATTA.................................................................................................................................................................................................................................................2512.00200000000110000000
...........................................................................................................................................................................................................................................................................................................TCTTGATAGCTATTCTATCAATGTT......................2512.00200000000011000000
................................................................................................................................................................................................................................................................................................................................TGTTTATCGTGCTAATGGTCTACCT.2512.00200000000011000000
..AAAAACTATATTTCGTCTTGGGTG................................................................................................................................................................................................................................................................................................................................2412.00200000002000000000
............................................................................................................................................................................................................................................................................................TTCACTTTCCAGGCCTCTTGAT........................................2212.00200000010010000000
............................................................................................AG-CGATTCATTATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGA.................................................................................................................2512.00200000000020000000
......................................................................................................................................................................................................................................TGATAGTCAGAA----------------------T--TTAATTTACAC....................................................................2412.00200000000020000000
..................................TGGACATACGCTATATGTAAGTAGC...............................................................................................................................................................................................................................................................................................2512.00200000000020000000
............................................................................................................................................................................................................................................................................................................................TCAATGTTTATCGTGCTAATGGTC......2412.00200000000011000000
............................................................................................................................................................................................................................................................................TAATTTACACAGCGTATTCACTTTCC....................................................2612.00200000000020000000
.......CTATATTTCGTCTTGGGTGTG..............................................................................................................................................................................................................................................................................................................................2112.00200000002000000000
.AAAAAACTATATTTCGTCTTGGGTG................................................................................................................................................................................................................................................................................................................................2512.00200000000020000000
.....AACTATATTTCGTCTTGGGTGTG..............................................................................................................................................................................................................................................................................................................................2312.00200000002000000000
............................................CTATATGTAAGTAGCA-----AGAACGAAC................................................................................................................................................................................................................................................................................2512.00200000000020000000
........TATATTTCGTCTTGGGTGTGCGGGA.........................................................................................................................................................................................................................................................................................................................2512.00200000000020000000
........................................TACGCTATATGTAAGTAGCA-----AGAACGA..................................................................................................................................................................................................................................................................................2712.00200000001010000000
............................................................................................................................................................................................................................................................................................................................TCAATGTTTATCGTGCTAATGGTCTACC..2812.00200000000002000000
........................................................................................TTGCAG-CGATTCATTATC----------------------------------------------------------------------------------------------------ATCATA.....................................................................................................................................2412.00200000000020000000
.........................................................GCA-----AGAACGAACATTTTTCCAGC.....................................................................................................................................................................................................................................................................2312.00200000000011000000
................................................................................................................................................................................................................................................................................................................................TGTTTATCGTGCTAATGGTCTA....2212.00200000000020000000
..........................................................................................................................................................................................................................................................................................................................TATCAATGTTTATCGTGCTAATGGTC......2612.00200000000011000000
.....................................................................................................ATTATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--T..............................................................................2812.00200000000020000000
......................................................................................................................................................................................................................................TGATAGTCAGAA----------------------T--TTAATTTACA.....................................................................2312.00200000001010000000
.........................................................GCA-----AGAACGAACATTTTTCCAGCAA...................................................................................................................................................................................................................................................................2512.00200000000020000000
..........................................................................................................................................................................................................................................................................................TATTCACTTTCCAGGCCTCTTGATAG......................................2612.00200000002000000000
...........................................................................TTTTTCCAGCAACTTGCAG-CGATT......................................................................................................................................................................................................................................................2412.00200000000020000000
..........TATTTCGTCTTGGGTGTGCGGGA.........................................................................................................................................................................................................................................................................................................................2312.00200000000020000000
.....................................................................................................................................................................................................................................................................................................................TATTCTATCAATGTTTATCGTG...............2212.00200000001010000000
..........................TGCGGGAGTGGACATACGCTATATGTA.....................................................................................................................................................................................................................................................................................................2712.00200000000020000000
.........................................................................................................TC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--TTAAT..........................................................................2812.00200000001010000000
..........TATTTCGTCTTGGGTGTGCGG...........................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
......ACTATATTTCGTCTTGGGTGT...............................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................TATCAATGTTTATCGTGCTAATGG........2411.00100000000010000000
..................................TGGACATACGCTATATGTAAGTAGCA-----A........................................................................................................................................................................................................................................................................................2711.00100000000010000000
...................TTGGGTGTGCGGGAGTGGACATACG..............................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.................................................TGTAAGTAGCA-----AGAACGAACATTTT...........................................................................................................................................................................................................................................................................2511.00100000000010000000
................................................................................................................................................................................................................TCATAG---------------TTGATAGTCAGAA----------------------T--TTA............................................................................2311.00100000000010000000
...........................................................................................................................................................................................................................................................................TTAATTTACACAGCGTATTCACTTTCCA...................................................2811.00100000000010000000
....AAACTATATTTCGTCTTGGGTGTGCGGGA.........................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
......................................................GTAGCA-----AGAACGAACATTTTTCCAGC.....................................................................................................................................................................................................................................................................2611.00100000000010000000
......................................................................................................TTATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------..................................................................................2511.00100000000001000000
.............................................TATATGTAAGTAGCA-----AGAACGAAA................................................................................................................................................................................................................................................................................2411.00100000000010000000
......................................................................................................TTATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGC.........................................................................................................2411.00100000000010000000
................................................................................................................................................................................................................TCATAG---------------TTGATAGTCAGAA----------------------T--...............................................................................2011.00100000000010000000
...............................................................................TCCAGCAACTTGCAG-CGATTCATT..................................................................................................................................................................................................................................................2411.00100000000010000000
....................TGGGTGTGCGGGAGTGGACATACG..............................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.............TTCGTCTTGGGTGTGCGGGAGTGGT....................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
........................................................................................................ATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTC............................................................................................................1911.00100000000001000000
.................TCTTGGGTGTGCGGGAGTGGACA..................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
........................................................................................TTGCAG-CGATTCATTAT................................................................................................................................................................................................................................................1711.00100000000001000000
....................................................AAGTAGCA-----AGAACGAACATT.............................................................................................................................................................................................................................................................................2011.00100000000001000000
...................................................................................................................................................................................................................................................................................CACAGCGTATTCACTTTCCAGGC................................................2311.00100000000001000000
.........................................................................................................................................................................................................................................................................................GTATTCACTTTCCAGGCCTCTTGA.........................................2411.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................TTCTATCAATGTTTATCGTGCTAATGG........2711.00100000000010000000
...........................................................................TTTTTCCAGCAACTTGCAG-CG.........................................................................................................................................................................................................................................................2111.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................TTATCGTGCTAATGGTC......1711.00100000000001000000
...........................................................................................................................................................................................................................................GTCAGAA----------------------T--TTAATTTACACAGCGTA..............................................................2511.00100000001000000000
.......................................................................AACATTTTTCCAGCAACTTGCAG-CGA........................................................................................................................................................................................................................................................2611.00100000000010000000
...................................................................................................................................................................................................................TAG---------------TTGATAGTCAGAA----------------------..................................................................................1611.00100000000001000000
.........................................................GCA-----AGAACGAACATTTTTCCAGCA....................................................................................................................................................................................................................................................................2411.00100000000010000000
.........................................................GCA-----AGAACGAACATTTTTCCAGCAAC..................................................................................................................................................................................................................................................................2611.00100000000010000000
........................................................................................................................................................................................................................................ATAGTCAGAA----------------------T--TTAATTTACACAG..................................................................2411.00100000000100000000
......................................................................................................................................................................................................................................TGATAGTCAGAA----------------------T--TTAATTTACACAGCGA...............................................................2911.00100000001000000000
.........................................................................................................TC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------A--AA.............................................................................2511.00100000000010000000
........................................................................................................................................................................................................................................ATAGTCAGAA----------------------T--TTAATTTACACAGCGTA..............................................................2811.00100000000010000000
..........................................................................................................................................................................................................................................AGTCAGAA----------------------T--TTAATTTACACAGCGTAT.............................................................2711.00100000000001000000
...................................................................................................................................................................................................................................................................................................TCCAGGCCTCTTGATAGCTAT..................................2111.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................TATCAATGTTTATCGTGCTAATGGTCT.....2711.00100000000010000000
........................TGTGCGGGAGTGGACATACGCTA...........................................................................................................................................................................................................................................................................................................2311.00100000000001000000
........................................................................................................................................................................................................................................................................................................................TCTATCAATGTTTATCGTGCTAAA..........2411.00100000010000000000
........................................................AGCA-----AGAACGAACATT.............................................................................................................................................................................................................................................................................1611.00100000000001000000
...................TTGGGTGTGCGGGAGTGGACATACGCTA...........................................................................................................................................................................................................................................................................................................2811.00100000000001000000
...........ATTTCGTCTTGGGTGTGCGGGAGTG......................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
......................................................................................................................................................................................................................................TGATAGTCAGAA----------------------T--TTAA...........................................................................1711.00100000001000000000
.....AACTATATTTCGTCTTGGGTGTGC.............................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.................................................................................................................................................................................................................................................A----------------------T--TTAATTTACACAGCGTA..............................................................1911.00100000000001000000
...........ATTTCGTCTTGGGTGTGCGGGAGT.......................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
........................................................................................................................................................................................................................................................................................................................TCTATCAATGTTTATCGTGCA.............2111.00100000001000000000
.........................................................................................................TC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--TTAATT.........................................................................2911.00100000010000000000
.....................................................................................................................................................................................................................................................................................CAGCGTATTCACTTTCCAGGCCTCTTGA.........................................2811.00100000001000000000
...................................................................................................................................................................................................................TAG---------------TTGATAGTCAGAA----------------------T--T..............................................................................1811.00100000000001000000
.....................................................................................................................................................................................................................................................................................CAGCGTATTCACTTTCCAGGCCTCT............................................2511.00100000001000000000
.......................................................................................................................................................................................................................................GATAGTCAGAA----------------------T--TTAATT.........................................................................1811.00100000000001000000
........................................................AGCA-----AGAACGAACATTTTTCCAGC.....................................................................................................................................................................................................................................................................2411.00100000000010000000
..................................................................................................................................................................................................................................................................................................TTCCAGGCCTCTTGATAGCTATTC................................2411.00100000000010000000
...............................................................................TCCAGCAACTTGCAG-CGATTCA....................................................................................................................................................................................................................................................2211.00100010000000000000
................................................................................................................................................................................................................................................................................................................................TGTTTATCGTGCTAATGGTCTACC..2411.00100000000010000000
........................TGTGCGGGAGTGGACATACGCTATA.........................................................................................................................................................................................................................................................................................................2511.00100000000100000000
....................TGGGTGTGCGGGAGTGGACATACGCTA...........................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.........ATATTTCGTCTTGGGTGTGC.............................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
........................................................................................................................................................................................................................................................................................................................TCTATCAATGTTTATCGTGC..............2011.00100000001000000000
..AAAAACTATATTTCGTCTTGGGTGT...............................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
.............................................TATATGTAAGTAGCA-----AGAACG...................................................................................................................................................................................................................................................................................2111.00100000000010000000
...............................................................................................................................................................................................................................................................................TTTACACAGCGTATTCACTTTCCAGGC................................................2711.00100000000010000000
...........ATTTCGTCTTGGGTGTGCGGGAGTGG.....................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
.............................................TATATGTAAGTAGCA-----AGAACGAAC................................................................................................................................................................................................................................................................................2411.00100000000010000000
..................................................................................................................................................................................................................................................................................................................................TTTATCGTGCTAATGGT.......1711.00100000000001000000
................................................................................................................................................................................................................TCATAG---------------TTGATAGTCAGA.........................................................................................................1811.00100000000001000000
.................................................................................................................................................................................................................................................................................TACACAGCGTATTCACTTTCCAGGCCTCT............................................2911.00100000000001000000
....AAACTATATTTCGTCTTGG...................................................................................................................................................................................................................................................................................................................................1911.00100000000010000000
..............................................................................................................................................................................................................................................................................................................................AATGTTTATCGTGCTAATGGTCTACCT.2711.00100000000010000000
.AAAAAACTATATTTCGTCTTG....................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.............................................TATATGTAAGTAGCA-----AGAACGAA.................................................................................................................................................................................................................................................................................2311.00100000000100000000
...................................................................................................................................................................................................................................................................................................................................TTATCGTGCTAATGGTCTACCTT2311.00100000000010000000
...................................................TAAGTAGCA-----AGAACGAACATTTTTCCAGC.....................................................................................................................................................................................................................................................................2911.00100000001000000000
.........................................................................................................................................................................................................................................................................................GTATTCACTTTCCAGGCCTCTTGATAGCTA...................................3011.00100000001000000000
..............................................................................................................................................................................................................................................................................ATTTACACAGCGTATTCACTTTCCA...................................................2511.00100000000010000000
..........................................CGCTATATGTAAGTAGCA-----AGAACGAACA...............................................................................................................................................................................................................................................................................2811.00100000000010000000
..........................................................................................................................................................................................................................................................................................TATTCACTTTCCAGGCCTCTTGAT........................................2411.00100000001000000000
...................................................................................................................................................................................................................TAG---------------TTGATAGTCAGAA----------------------T--TTAATTTACAC....................................................................2811.00100000000010000000
.........ATATTTCGTCTTGGGTGTGCGG...........................................................................................................................................................................................................................................................................................................................2211.00100000000010000000
........TATATTTCGTCTTGGGTGTGCGG...........................................................................................................................................................................................................................................................................................................................2311.00100000000010000000
.........................................................................................................TC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------A--...............................................................................2311.00100000000010000000
............................................................................................AG-CGATTCATTATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATA...............................................................................................................2711.00100000000010000000
............................................................................................................................................................................................................................................................................TAATTTACACAGCGTATTCAC.........................................................2111.00100000000001000000
.........................................................................................TGCAG-CGATTCATTATC----------------------------------------------------------------------------------------------------ATCATAG---------------T....................................................................................................................2511.00100000000001000000
............................................................................................................................................................................................................................................................................TAATTTACACAGCGTATTCACTTTCCAGGC................................................3011.00100000001000000000
........................................................................................................................................................................................................................................................................................................................TCTATCAATGTTTATCGTGCTAATGGTCA.....2911.00100000000010000000
........................................................................................................................................................................................................................................................................................................................TCTATCAATGTTTATCGTGAA.............2111.00100000001000000000
..................................TGGACATACGCTATATGTAAGTA.................................................................................................................................................................................................................................................................................................2311.00100000001000000000
...............................................................................................................................................................................................................................................................................TTTACACAGCGTATTCACTTTCCAGGCC...............................................2811.00100000000010000000
.............................................................................................................................................................................................................................................................................AATTTACACAGCGTATTCACTTTCCAGG.................................................2811.00100000000010000000
........................................................................................................................................................................................................................................................................................................................TCTATCAATGTTTATCGTGCTAATGGTCT.....2911.00100000000010000000
...................................................................................................................................................................................................................................................................................CACAGCGTATTCACTTTCCAGGCC...............................................2411.00100000000001000000
...............................................................................................................................................................................................................ATCATAG---------------TTGATAGTCAGAA----------------------T--T..............................................................................2211.00100000000010000000
.............................................................................................................................................................................................................................................................................................................................CAATGTTTATCGTGCTAATGGTCTACC..2711.00100000000010000000
..................................................................GAACGAACATTTTTCCAGCAACTTGC..............................................................................................................................................................................................................................................................2611.00100000000010000000
.......................GTGTGCGGGAGTGGACAT.................................................................................................................................................................................................................................................................................................................1811.00100000001000000000
..............................................ATATGTAAGTAGCA-----AGAACGAACAC..............................................................................................................................................................................................................................................................................2511.00100000000010000000
......ACTATATTTCGTCTTGGGTGTGC.............................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
................................................................................................................................................................................................................................................................................TTACACAGCGTATTCACTTTCCAGGCC...............................................2711.00100000000010000000
....................................................................................CAACTTGCAG-CGATTCATTATC----------------------------------------------------------------------------------------------------ATC........................................................................................................................................2511.00100000000001000000
.........................................................................................TGCAG-CGATTCATTATC----------------------------------------------------------------------------------------------------A..........................................................................................................................................1811.00100000000001000000
.....................................................................................AACTTGCAG-CGATTCATTATC----------------------------------------------------------------------------------------------------ATC........................................................................................................................................2411.00100000000001000000
................................................................................................................................................................................................................................................................................TTACACAGCGTATTCACTTTCCAGGC................................................2611.00100000000001000000
...............................................TATGTAAGTAGCA-----AGAACGAACA...............................................................................................................................................................................................................................................................................2311.00100000000100000000
.....................................................................................................................................................................................................................G---------------TTGATAGTCAGAA----------------------T--T..............................................................................1611.00100000000001000000
..................................................................................AGCAACTTGCAG-CGATTCATT..................................................................................................................................................................................................................................................2111.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................TTCTATCAATGTTTATCGTGCTAA...........2411.00100000000010000000
................................................................................................................................................................................................................TCATAG---------------TTGATAGTCAGAA----------------------T--T..............................................................................2111.00100000000010000000
....AAACTATATTTCGTCTTGGGTGTGCG............................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
...........ATTTCGTCTTGGGTGTGCGGG..........................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
......................................................................................................TTATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--T..............................................................................2711.00100000000010000000
.........ATATTTCGTCTTGGGT.................................................................................................................................................................................................................................................................................................................................1611.00100000000010000000
...............................................................................TCCAGCAACTTGCAG-CGATTCATTATC----------------------------------------------------------------------------------------------------...........................................................................................................................................2711.00100010000000000000
.........................................................................................................................................................................................................................................................................................GTATTCACTTTCCAGGCCTCTTGAT........................................2511.00100000001000000000
.........................................................................................TGCAG-CGATTCATTATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGA.................................................................................................................2811.00100000000010000000
......................................................GTAGCA-----AGAACGAACATTTTTCCAGCA....................................................................................................................................................................................................................................................................2711.00100000000010000000
...................TTGGGTGTGCGGGAGTGGACATACGCC............................................................................................................................................................................................................................................................................................................2711.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................ATGTTTATCGTGCTAATGGTC......2111.00100000000001000000
................................................................................................................................................................................................................TCATAG---------------TTGATAGTCAGAA----------------------A--...............................................................................2011.00100000000010000000
.................................................TGTAAGTAGCA-----AGAACGAACATTT............................................................................................................................................................................................................................................................................2411.00100000000010000000
...................TTGGGTGTGCGGGAGTGGAC...................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
..................................................................................................................................................................................................................................................................................................TTCCAGGCCTCTTGATA.......................................1711.00100000000001000000
.....................................................................................AACTTGCAG-CGATTCATTATC----------------------------------------------------------------------------------------------------ATCA.......................................................................................................................................2511.00100000000001000000
..........................................................................................................................................................................................................................................................................................TATTCACTTTCCAGGCCTCTTGATA.......................................2511.00100000000010000000
........................................................................................................ATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--TTAA...........................................................................2811.00100000000010000000
.............................................................................................................................................................................................................................................................................AATTTACACAGCGTATTCACTTT......................................................2311.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................TTCTATCAATGTTTATCGTGC..............2111.00100000001000000000
..............................................................................TTCCAGCAACTTGCAG-CG.........................................................................................................................................................................................................................................................1811.00100000000001000000
.........................................................................................................................................................................................................................................TAGTCAGAA----------------------T--TTAATTTACACAGCGT...............................................................2611.00100000000001000000
........TATATTTCGTCTTGGGTGTG..............................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
...................TTGGGTGTGCGGGAGTGGACATAC...............................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.....................................................................................................................................................................................................................................................................................CAGCGTATTCACTTTCCAGG.................................................2011.00100000000001000000
.........................................................................................................TC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--...............................................................................2311.00100000000010000000
...............................................TATGTAAGTAGCA-----AGAACGAACATTTT...........................................................................................................................................................................................................................................................................2711.00100000000001000000
.................TCTTGGGTGTGCGGGAGTGGACATA................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
..........TATTTCGTCTTGGGTGTGCGGGAGTGGAA...................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
...........................................................................TTTTTCCAGCAACTTGCAG-CGT........................................................................................................................................................................................................................................................2211.00100000000010000000
.........................................................................................................................................................................................................................................TAGTCAGAA----------------------T--TTAATTTACACAGCGTATT............................................................2911.00100000000010000000
.............................................TATATGTAAGTAGCA-----AGAACGA..................................................................................................................................................................................................................................................................................2211.00100000000010000000
.................................................TGTAAGTAGCA-----AGAACG...................................................................................................................................................................................................................................................................................1711.00100000000001000000
...............................................................................................................................................................................................................ATCATAG---------------TTGATAGTCAGAA----------------------T--TTAAT..........................................................................2611.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................TTCTATCAATGTTTATCGTGCTAATGGTC......2911.00100000001000000000
...................TTGGGTGTGCGGGAGT.......................................................................................................................................................................................................................................................................................................................1620.50100000000001000000
..................CTTGGGTGTGCGGGAGTG......................................................................................................................................................................................................................................................................................................................1820.50100000000001000000
.........................................................................................................................................................................................................................................TAGTCAGAA----------------------T--TTAAT..........................................................................1540.25100000000001000000
.....................................................................................AACTTGCAG-CGATTC.....................................................................................................................................................................................................................................................1550.20100000000001000000
........................................................................................................................................................................................................................................................................................................................TCTATCAATGTTTATCGTAAA.............2180.13100000001000000000
droSec2
AAAAAAACTATATTTCGTCTTGGGTGTGCGGGAGTGGACATACGCTATATGTAAGTAGCA-----AGAACGAACATTTTTCCAGCAACTTGCAG-CGATTCATTATC----------------------------------------------------------------------------------------------------ATCATAG---------------TTGATAGTCAGAA----------------------T--TTAATTTACACAGCGTATTCACTTTCCAGGCCTCTTGATAGCTATTCTATCAATGTTTATCGTGCTAATGGTCTACCTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
AGAAAAACTATATTTCGTCTTGGGGGTGCGGGAGTGGACATACGCCATATGTAAGTAGCA-----AGAGGAAACATTTTTCCAGCAACTTTCAG-CAATTCATTATCCCAAATATGCA--CAAT---------------------A-CTGTTTTCACAACAATA-------CATAAAAGTAATTGCTAAAGCACCAAAAAACAATCGATGATAGC-ATTAATA----GTTTGATAGTCAGAA----------------------T--TTAATTTACCCAGCGTATTCACTTTCCAGGTCTCTTGATAGCTATTCTATCAATGTTTATCGTGCTGATGGTCTACCTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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..........................................................................................................................................................................................................................................................................................................................TATCAATGTTTATCGTGCTGATGGTC......2618.0080000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000003100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
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...............................................TATGTAAGTAGCA-----AGAGGAAA.................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................................................................................................................................................................................................CCAGCGTATTCACTTTCCAGG.................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
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............................................................................................................................................................................................................................................................................................................................TCAATGTTTATCGTGCTGATGGTCTAA...2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTTCGTCTTGGGGGTGCGGG..........................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCAATGTTTATCGTGCTGATGGTCT.....2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................................................................TTTCCAGCAACTTTCAG-CAAT.......................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GATAGC-ATTAATA----GTTTGATAGTCAGA.........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TATTCTATCAATGTTTATCGT................2111.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTATCGTGCTGATGGTCTAC...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TGATAGTCAGAA----------------------T--TTAATTTACCCAGCG................................................................2811.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................GC-ATTAATA----GTTTGATAGTCAGAA----------------------T--T..............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TAATA----GTTTGATAGTCAGAA----------------------T--...............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCAATGTTTATCGTGCTGATG.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................TGCGGGAGTGGACATACGCCATATG.......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TATCGTGCTGATGGTCTACC..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................ATAGCTATTCTATCAATGTTT.....................2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................T--TTAATTTACCCAGCGTATTCACTTT......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TTCCAGCAACTTTCAG-CAATT......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TTCACTTTCCAGGTCTCTTGATAGC.....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TCCAGGTCTCTTGATAGCTATT.................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCTTGGGGGTGCGGGAGTGGAC...................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................ATCAATGTTTATCGTGCTGATGGTC......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................................................................................................................................................................................................................................GTTTATCGTGCTGATGGTCTACCT.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TACCCAGCGTATTCACTTTCCAGGTC...............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TAAGTAGCA-----AGAGGAAACATTTTT..........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TCGTGCTGATGGTCTACCTT2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................TTAATA----GTTTGATAGTCAGAA----------------------T--TTAATT.........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CTATTCTATCAATGTTTATCG.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AAGTAGCA-----AGAGGAAACATTTTTC.........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................TAATA----GTTTGATAGTCAGAA----------------------T--TTAA...........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CTATATTTCGTCTTGGGGG................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCAATGTTTATCGTGCTGATGGTCTACCT.2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CAATGTTTATCGTGCTGATTT........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CGCCATATGTAAGTAGCA-----AGAGGAA..................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................T--TTAATTTACCCAGCGTATTCACTTTC.....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................AGTGGACATACGCCATATGTAAGTAG................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTTCGTCTTGGGGGTGCGG...........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ATTCACTTTCCAGGTCTCTTGATAGC.....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTTCGTCTTGGGGGTGCGA...........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TAATTTACCCAGCGTATTCAC.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TATTCACTTTCCAGGTCTCTTGATAGC.....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AGTAATTGCTAAAGCACCAAAA...................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TATTCACTTTCCAGGTCTCTTGATA.......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCTTGGGGGTGCGGGAGTGGA....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TATCGTGCTGATGGTCTACCT.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTGGGGGTGCGGGAGTGGACATAC...............................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TATATTTCGTCTTGGGGGTGCGGGA.........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCGTCTTGGGGGTGCGGGAGTGGA....................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................ATTCTATCAATGTTTATCGTG...............2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AACTATATTTCGTCTTGGGGGTGCT............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GTGCGGGAGTGGACATACGCA............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.........ATATTTCGTCTTGGGGGTGCG............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ATGTTTATCGTGCTGATGG........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CCAAATATGCA--CAAT---------------------A-CTGTT..................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATATTTCGTCTTGGGGGTGCCA...........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CAGCGTATTCACTTTCCAGGT................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CATATGTAAGTAGCA-----AGAGGAAACATT.............................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTTACCCAGCGTATTCACTTTCC....................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........TATATTTCGTCTTGGGGGTGCG............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TCCAGGTCTCTTGATAGCTAT..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................AATCGATGATAGC-ATTAATA----G......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................TTTACCCAGCGTATTCACTTTCCAG..................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...AAAACTATATTTCGTCTTGGG..................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TATCAATGTTTATCGTGCTGATGGT.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................AGTGGACATACGCCATATGTAAGTAC................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TCGATGATAGC-ATTAATA----GTTTGATAG..............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CTTGGGGGTGCGGGAGTGGACATA................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TTCACTTTCCAGGTCTCTTGATAGCTAT..................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTTACCCAGCGTATTCACTTT......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CAATGTTTATCGTGCTGATGG........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AATGTTTATCGTGCTGATGGTCTACCT.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................ATTAATA----GTTTGATAGTCAGA.........................................................................................................2111.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AACTATATTTCGTCTTGGGGG................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TAATTTACCCAGCGTATTCACTTT......................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ACGCCATATGTAAGTAGCA-----AG.......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................................GCA-----AGAGGAAACATTTTTCCAGCAAC..................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATACGCCATATGTAAGTAGCA-----.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TGTTTATCGTGCTGATGGTC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCGTCTTGGGGGTGCGGGAGTGG.....................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................CAAAAAACAATCGATGATAGC-..................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ACTATATTTCGTCTTGGGGGT...............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TATGTAAGTAGCA-----AGAGGAAACATT.............................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTTCGTCTTGGGGGTGCAA...........................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................GTTTGATAGTCAGAA----------------------T--GG.............................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
droEug1
CGAGAAACTACACTTCGTGCTGGGCGTGCGGGAGTGGACCTACGCCATATGTGAGTAACC---------------------CAGCGATTAG--G------CGCAGTCACAAATATGCTTTCAATTTC-T-TCGAGG------------CGTTTTAAAAATAGTTCATCGCCCATAAAAGCAATTGCTAAAACAACAAGAGAAATCGGAGAGTGACGATTGATG----GTTTGATCGCCAGAGA---------TGGTCGCTCGCTCCG--AACTTATCCAGCTGGTTCTCTCTGCAGGTCTGCTGATTGCCATCCTATCCATGTTCATCGTGCTGATGGTCTACCTCSizeHit CountTotal NormTotal
No Reads
droBia1
AGAAAAGCTCAATTTCGTTCTCGGGGTGCGGGAGTGGACCTACGCCATATGTGAGTAGCCCCAAGCAAACAAACATTTCTCCAGCGATTGG--G-CCATTCGCAATCACAAATATGCTTTCAATTTC-T-TCGGGG------------CTTTTTAAAAATAGTA---CGCTCATAAAAGCAATTGCTGAAACAACAAGAGAAAATCGCGAGTGACGATTGATACACAGTTTGATTGCCAGAGA---------TGATCTTTCGCTCCG--ATCTCATCCAGCCAATTCTCTCTGCAGGCCTCCTGATTGCGATACTGTCCATGTTTATTGTGCTGATCGTGTATCTCSizeHit CountTotal NormTotal
No Reads
droTak1
AGAAAAGTTTCAATTTGTTCTCGGTGTGCGGGAATGGACCTACGCCATATGTGAGTAGCA-----AAC----ACATTTCTCCAGCATTTAG--CCCAATTCACAATCACAAATATTCTTTCGATTTC-TTCGGGGGCGAGAGTTTATAAA---TATAGATAGTA---CGCTCATAAAAGCAATTGCTAAAACAACAAGAGAAAATCGCAAGTGAAGATTGATA----CAT----------GGA---------TGATCTTTTGTTTTG--GATTT----------CTCTGTTTGCAGGCCTCTTGATTGCGATTCTGTCCATGTTTATTGTGCTGGTGGTCTACCTTSizeHit CountTotal NormTotal
No Reads
droEle1
AGAGAAGCTACACTTTGTTTTGGGCGTGCGGGAATGGACCTACGCCATATGTGAGTAACA-----AAAACAAACA---------------------------CAATCACAAATATGCTTTCAATTTCAT-TCGGGGCAA--ATTTGTATGTTTTAAAAATAGTA---CGCTCATAAAAGTAATTACTGAAACAACAGAAGGAAATTGCGGGTGCCGAGTGATA----GTTTGATCGCAAGAAA---------TGATTTTTCGCTCCA--AATTTATCCAGCTGATTCTCTTTCCAGGCCTCTTGATTGCGATAATATCCATGTTTATTGTGCTAATGGTGTACCTGSizeHit CountTotal NormTotal
No Reads
droRho1
AGAAAAGCTCCACTTTGTCTTGGGCGTGCGGGAATGGACCTACGCCATATGTGAGTACCA-----CAAACAAACATTTCTCCAATGATTAG--G-C------CAATCACAAATATGTTTTCAATTTCGT-TCGGGAAAA--AT--GTGTGTTTTAAAAATAGCA---CGCTCATAAAAGTAATTACCGAAACAACAGAAGGAAATTGCGGGCGCCGATTGATA----GTTTGATCGCGAGAAA---------TGATCTTTGGCTCCA--AATTTATCCAGCTGATTCTATTTGCAGGCCTCTTGATTGCGATAATATCCATGTTTATTGTGCTGATCGTGTACCTASizeHit CountTotal NormTotal
No Reads
droFic1
ACAAATGCT-------------------------------------------------------------------------------------------------------------TTCGATTTCAT-TCGAGGCAA--ATTTGTGCGTCTTAAAAATAGTA---CGCTCGTAAAAGTAATTGTTAGAATAACACAAGGAAATCGCGGGTGCCGATTGATA----TTTTGATCGTTAGCTA---------TGATCTTTTGCTCTC--AA-TTATCCAGCTGACTCTCTTGGCAGGCCTCCTCATCGCGATACTATCGATGTTCATCGTGCTGATGGTGTACCTCSizeHit CountTotal NormTotal
No Reads
droKik1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTGCAGGTCTTTTGATCGCCATAATATCCATGTTTATTGTGCTAATGGTGTACCTGSizeHit CountTotal NormTotal
No Reads
droAna3
AGAGAAGTTTCACTTTGTGCTGGGAGTGCGGGAATGGACCTACGCCATATGTAAGTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................CGGGAATGGACCTACGCCATA.........................................................................................................................................................................................................................................................................................................2111.001000001
droBip1
AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGATTTTGTTGGCCCTCCCACTCGATAGGTCTTCTGATCTCCATAATATCCATGTTTATTGTACTAATGGTGTATCTGSizeHit CountTotal NormTotal
No Reads
dp5
CGAGAAGCTGCACTTTGTGCTGGGCGTCCGCGAGTGGACCTACGCCATCTGTGAGTGCTC-----CCACC------TCCTCC------TCC--G-CCGCACGCACTCATAAATATGTTTCCAAT-------------------------------ATAATAGTA---CGCTCATAAAAGTGATTGTTTGAATAACAAAAGTGAATTGCCTGTGGCGATTGATA----GATTAATGGCCCCAAAACAGAAGAGTCCTAACTCGCTCTC--T--CTTTCGCGTGCTTTCTCTTGGCAGGTCTCTTGATATCCATTATATCCATGGTCATTGTGCTGGTGGTGTACCTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droWil2
AGAGAAACTTCATTTCATATTGGGCACACGCGAATGGACCTATGCCATATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............CATATTGGGCACACGCGAAT.......................................................................................................................................................................................................................................................................................................................2011.00100100
droVir3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGCCTTCTGATCTGCATTATATCCATGTTCATCGTGCTGATCGTGCACCTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AGAGAAGCTTCGCTTTGTGCTGGGCGTCAGGGAGTGGACCTATGCTGTATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CACATC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTTTCCTTAGGCCTTCTGATCTGCATTATATCGATGTTTATCGTATTGATTGTGCATTTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:44 PM