ID:

dsi_17237

 Coordinate:

3r:12844499-12844648 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.7 -30.7 -30.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTAATTTCTAGCTGCGTCGTATAAAACACCTTTTTTTTGGTGTAATCCAGGTAAAACAATAAATAGTGGTCTCAAGTGCAATTCCATCGAACTTGCGGCTGTTCACTTTTGCTGAACAGTTTGCAATTCTTGTTAATTTAACACTTTCTATGGCGTGGGAGTGTGTGTGTGTGTGAGTGTGTATATAACAAAGCATGCTAAAGTTGATTGAAGAAGGAATTTTCCACGAAACGTGTCACAGCGTTCCTGG
**************************************************...............((((..............)))).(((.(((((((((((((.......))))))).)))))))))...........((((((((........))))))))....((((((...(((.......)))..))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
................................................................................ATTCCATCGAACTTGCGGCTG..................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0
....TTTCTAGCTGCGTCGTATAAAACACC............................................................................................................................................................................................................................ 26 0 1 2.00 2 1 0 1 0 0 0 0
..........GCTGCGTCGTATAAAACACCT........................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0
.................................................................................TTCCATCGAACTTGCGGCTGTT................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................AATTCCATCGAACTTGCGGCTGC.................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0
TTAATTTCTAGCTGCGTCGTATAAAAC............................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0
..................................................................................................................................................................................................ATGCTAAAGTTGATTGAAGAAGG................................. 23 0 1 1.00 1 0 0 0 0 1 0 0
............................................................................................................................................................................................CAACGAAGGCTAAAGTTGATTGA....................................... 23 3 1 1.00 1 0 0 0 1 0 0 0
.........AGCTGCGTCGTATAAAACAC............................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................................................GAAGGCTAAAGTTGATTGATGAA................................... 23 3 1 1.00 1 0 0 0 1 0 0 0
.........AGCTGCGTCGTATAAAAC............................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0
............................................................................TGCAATTCCATCGAACTTG........................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
...ATTTCTAGCTGCGTCGTATAAAAC............................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0
..AATTTCTAGCTGCGTCGTATA................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................AAGTAAAAGTTGATTGAAGAAG.................................. 22 3 3 0.33 1 0 0 0 1 0 0 0
........TAGCTGCGTCGTAAAAAAAA.............................................................................................................................................................................................................................. 20 2 3 0.33 1 0 0 1 0 0 0 0
.................................................................................................................................................................................................CAAGTAAAAGTTGATTGAAGAA................................... 22 3 4 0.25 1 0 0 0 1 0 0 0
......................................................................................................................................................................................................TAATGTTGATTTATGAAGGAA............................... 21 3 6 0.17 1 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................CGTCACAGCGTTCCGGG 17 2 7 0.14 1 0 0 0 0 0 1 0
.....................................................................................ACCGAACTTGCGGCT...................................................................................................................................................... 15 1 10 0.10 1 0 0 0 0 0 0 1
.........................................................................................AACTTGCGGCTGATCACCTC............................................................................................................................................. 20 3 10 0.10 1 0 1 0 0 0 0 0
.......................................................................................................................TTGGCAATTCTTGTTA................................................................................................................... 16 1 13 0.08 1 0 0 0 1 0 0 0
.....................................CGGTGTAAGCCAGGTAA.................................................................................................................................................................................................... 17 2 14 0.07 1 0 0 0 0 0 0 1
....................................TTGGTGGAATCCTGATAAAA.................................................................................................................................................................................................. 20 3 16 0.06 1 0 0 0 0 0 1 0

Anti-sense strand reads

AATTAAAGATCGACGCAGCATATTTTGTGGAAAAAAAACCACATTAGGTCCATTTTGTTATTTATCACCAGAGTTCACGTTAAGGTAGCTTGAACGCCGACAAGTGAAAACGACTTGTCAAACGTTAAGAACAATTAAATTGTGAAAGATACCGCACCCTCACACACACACACACTCACACATATATTGTTTCGTACGATTTCAACTAACTTCTTCCTTAAAAGGTGCTTTGCACAGTGTCGCAAGGACC
**************************************************...............((((..............)))).(((.(((((((((((((.......))))))).)))))))))...........((((((((........))))))))....((((((...(((.......)))..))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR618934
dsim w501 ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O001
Testis
..............................................................................GTTAAGGTAGCTTGAACGC......................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
...................................................................CCAGAGTTCACGTTAT....................................................................................................................................................................... 16 1 5 0.20 1 0 1 0 0 0 0
.........................................................................................TTGATCTCCGACAAGTG................................................................................................................................................ 17 2 6 0.17 1 0 0 0 1 0 0
...................................................................GCAGAGTTCACGTTAA....................................................................................................................................................................... 16 1 7 0.14 1 0 1 0 0 0 0
.........................................................................................TTGATCTCCGACAAGTGGAA............................................................................................................................................. 20 3 9 0.11 1 0 0 1 0 0 0
.........................................................................................TTGATCTCCGACAAGTGGA.............................................................................................................................................. 19 3 18 0.11 2 0 0 1 0 0 1
.......................................................................................................................................................................................ATACTGTTTCGTAGGAT.................................................. 17 2 14 0.07 1 0 0 0 0 1 0
..........................................................................................TGATCTCCGACAAGTG................................................................................................................................................ 16 2 20 0.05 1 0 1 0 0 0 0
..................................AAAACCACCTTAGGACCA...................................................................................................................................................................................................... 18 2 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:12844449-12844698 - dsi_17237 T---TAATTTCTA-G-------------CTGCGTC------GT--A--TAAAACACCTTT--TTTTTGGTGTAATCCAGGTAAAAC----------------A----------ATAAAT----A-G-------------------------------TGGTCTCAAGTGCAATTCCATCGAACTT-----------------GC---------------------GGCTGTTCACTT-TTG----CTGA-----------ACAGTTTGCAATTCTTGTTAATTTAAC---ACT-TTCTATGGCGT----------GGGA------GTGTGTGTGTGTGTGA----------GTGTGTATATAAC--AAAGCATGCTAAAGTTGA-TTGAAGAAGGAATTTTCCACGAAACGTGTCA------------------------CA------GCGTTCCTGG
droSec2 scaffold_0:13677329-13677582 - T---TAATTTGTA-G-------------CTGTGTC------GT--A--TAAAACACCTTT--TTTTTGGTGTAATCCAGGTAAAAC----------------A----------ATAAAT----A-G-------------------------------TGGTCTCAAGTGCAATTCCATCGAACTT-----------------GC---------------------GGCTGTTCACTT-TTG----CTGA-----------ACAGTTTGCAATTCTTGTTAATTTAAC---ACT-TTCTATGGCGT----------GGGAG--TGTGTGTGTGTGTGTGTGA----------GTGTGTGTATAAC--AAAGCATGCTAAAGTTGA-TTGAAGAAGGAATTTTCCACGAAACGTGTCA------------------------CA------GCGTTCCTGG
dm3 chr3R:8269809-8270051 + T---TAATTTCTA-G-------------CTGCGGC------GT--A--TAAAACACCTTT-TTTTTTGGTGTAATCCAGGTAAAAC----------------A----------ATAAAC----A-G-------------------------------TGGTCTCAAATGAAATTCCATCGAACTT-----------------GC---------------------GGCTGTTCACTT-TTG----CTGA-----------ACAGTTTGCAATTCTTGTTAATTTAAC---ACT-TTCTATGGCGT----------GGGA--------------GTGTGTGT----------GTGTGTGTATAAA--AAAGCATGCTAAAGTTGA-TTGAAGAAGGAATTTTCCACGAAACGTGTCA------------------------CA------GCGTTCCTGG
droEre2 scaffold_4770:13350946-13351190 - T---TAATTTCTA-G-------------CTGCAGT------GA--A--AAAAACAGTTTTGTTTTTTGGGGTAATCCAGGTAAAAT----------------C----------ACAA--GAACACT-------------------------------ATTTCTCAATTGCAATTCCATTGAACTT-----------------GC---------------------GGTTGTTCACTTTTTG----CTAA-----------ATAGTTTGCGATTATTGTTAATCTAAC---ACT-TTCTATGCTGT----------GGGA------------------GTGT----------GTGTGTGTATAAC--AAAGCATGCTAGAGTTCATTTGAAGAAGGAATTTTCCACGAAACGTGTCA------------------------CT------GCGTTCCTGG
droYak3 3R:12593207-12593457 + T---TAATTTCTA-G-------------TTGCGGG------GA--A--TAAAACACCTTTTTTTTTTGGTGTAATCTAGGTAAAAT----------------C----------ATAAAT----A-G-------------------------------TAGTCTCAAGTGCAATTCCATCGAACTT-----------------GC---------------------GGTTGTTCACTTTTTG----CTGA-----------ATAGTTTCCAATTCTTTTTAATTTAAC---ACT-TTTTAGGCTGT----------GTGA------GTGGGT--GTGCGTGT----------GTGTGTGTATAAC--AAAGCATGCTAGAGTTCA-TTGAAGAAGGAATTTTCCATCAAACGTGTCA------------------------CT------GCGTTCCTGG
droEug1 scf7180000409615:516577-516856 + TCGTTAATTTATA-T-------------CTGACGC------AAAAA-GGAAAACATATTT--TTTTGGGTGTAAACCAGGTACAAC----------------A----------ACATAT----A-G-------------------------------GTGTCTCAAGTAAAATTC-GTCGAATG--AGGGGA-CAAGTGTTTGC---------------------GGTTGTTCATTTATTG----CTGA-----------ATAGTTTGCAATTCTTATTAATTCGGC---ATA-TTTAATGGTGTGT----TTGTGGGTGTGCGTGTATGTATGTATATGT----------GTCTATGTATAAC--AAAGCATGATAATGTCGA-TTCAACAAGGAATTTTCCACGAAACGTGTCA------------------------GA------GCAT--TTGG
droBia1 scf7180000302155:29704-29971 - T---TAGCTCCTA-G-------------CTGGCGAAACCGAGG--CGAACAAACATAT-----TTTGGCTGTAAACCAGGTAGAAT----------------A----------ACAA--CAAGAAG-----------TGGGCGGGTGGGCGTGCGGGATGTCTCAAGTGCAGTTC-GTCGAACG----TGGA-CAGGTGTTG-------------------------------------------C-----------------CTCTGCGGTTCCTGTTAATTGGGC---AAA-TTCCGTCGTTCGC----CCGTG---------CTCTGTGGGTGTCTGT----------GTGTCTGTATATC--AAGGCATGCTAG-GCTGA-TTGAGGCAGGAATTTTCCACGAAACGTGACA------------------------TCGCAGCAGCGT------
droTak1 scf7180000415366:255488-255750 - TCGTTAATTTATA-G-------------CTGGCT--ATAGCAA--A--TAAAACATATTT---TTTGGGTGTAAACCAGGTACAAC----------------A----------AAA--TAAACA-ACGGGTGGGTGTGGAGGTGGGGG---------ATGTCTCAAGTGCAGTTC-GTCGAACG----TGGA-CAAGTGTT--------------------------------------TG----CTGA-----------ATAGTTTGCAATTCTTGTTAATTCGGC---AAAATTCCAGCGTTTGC----GTGTA----------TTTGTGTGTCTGTATATCTGTAT--GTGTCTGTA----------------------TA-TTGAACAAGGAATTTTCCACGAGACGTGTCA------------------------CC---------CGCCGCG
droEle1 scf7180000490702:26702-26951 - TCGTTAATTTGT--G-------------CTGAGGC------AAAAA--TAAAACATATTT---TTTGGGTGTA-ACCAGGTACAAC----------------A----------A--AGT----G-G-------------------------------GTGTCTCAAGTGCCATTC-CTCGAACG----TGGA-CAAGTGTTTGC---------------------G---ATGCACTTACTG----CTGA-----------ATAGTTTGCAATTCTTGTTAATTTTGC---ATG-TAGCATGGTGT----------GCGT----GTGTGTGTGTGTGTGTGT----------GTGCCTGTATATC--AAAGCATGTTAAAGTTGA-TTGAACAAGGAATTTTCCACTAAGCGTTT-----------------------------------------TGC
droRho1 scf7180000779237:54086-54314 + TCGTTAATTTGT--G-------------CTGAGGC------AGAAA--TAAAACATATTT---TTTGGGTGTAAACCAGGTACAAC----------------A----------A--AAT----G-G-------------------------------GTGTCTCAAGTGCAATTC-GTCGAACG----TGGACCAAGTGTTTGC---------------------G---GTTCACTTATTG----CTGA-----------ATACTTTGCAATTCTTGTTAATTTGGA---A--------------------------------------GTGCGTATGTGT----------GTGTCTGTATAAC--AAAGCATGCTAAAGTTGA-TTGAACAAGGAATTTTCCACGAAGCGTTT-----------------------------------------TGC
droFic1 scf7180000453812:816152-816401 - TCATTAACTT--------------------GCGAC------AA--A--TAAAACATATTT---TTTGGTTGTAAACCAGGTACAAC----------------A-------------AAT----A-G-------------------------------GTGTCTCAAGTGCAATTC-GTCGAATG----TGGA-CAAGTGTTTGCT--------------------GGCGATTCACTTAATG----CTGAATA--------ATAGTTTGCAATTCTTGTTAATTTTGC---AAA-TTCCGTGGTGC----------GCGA------GTTTGTGTGTGTGTGTGTGTGTAT--GTTCCTGTATAACAAAAAGCACGCTAAAGTTGA-TTGGACAAGGAATTTTCCACAGAG-------------------------------------------------
droKik1 scf7180000302475:334067-334323 + TG------------C-------------CGGACGC------GA--A--TTAAACACATTC---TTTGGGTGCAAACCAGGTGCAAT----------------T----------AAAATG----T-G---------------------------TGTGTCTCCTCTATTGGAATTT-ATCAAACG----TGGA-CAGGTGCTT---------------------------------TT---ATCAAAAGC-----------ATAGTTTACAATTCTTGGTTATTTCC----ATG-T-GCATGCC-CATAAGCGTGTA----------TCTGTGTGTGTGTGTGTGTTTGTGAATATGTGTATAAC--AAAGCATGCCAAAATGGA-TTGAAAAGGAAATTTTCCATTGAAAGATTAA------------------------GC--------GCGTCAGC
droAna3 scaffold_13340:7651692-7651953 + T---TAAATTAAA-G-------------CCGCTGCGATATAAA--ATATTAAACATAT-----TTTGAGCTGAAACCAGGCGGAAA----------------A----------C-----------T-------------------------------TTCCACAAAGTGTAATTC-TGCGATAGCACAAGTC-CAAGTGTTT--------------------------------------T----CACG-----------GCAATTGGAAATTCTTGTTAATAGGCAGCA-AGTGATTG-------------------------GGTGGGTGGGTG-GTTG----------GTGTGCGAAAAAA--ATACAGTGCCGAAT-----TTCAGAAAGGAATTTTCCACGAG-CT-CCCACATACACCCACATAGTGAGATTAAATGTATCAGCGT---TGG
droBip1 scf7180000396708:1192934-1193174 - AATTAAAGCC--------------------ACGGCTATATAAAAAA--TTAAATAAAT-----TTTAAGCTAAGACCAGGCGCAAA----------------A----------G-----------T-------------------------------TTCCACCAAGTGTAATTC-TGTGAATGCACGAGTA-CAGTTGTTG--------------------------------------G----CACT-----------GCAATTGGAAATTCTTGCCAATTCGTCGGA-AGTTACTA---------------------------------GGTGCTGCG----------GTGCATAAAAAAA--AAACAGTGCCGAAT-----TTCAGCAAGGAATTTTCCATGCCACCCAC-------------TTAGTGAGATTAAATACATCAGCG---TGGG
dp5 2:5497798-5498093 + TC---CGTATCTGTGCAAAAATTCGTATAAATTT--GT-------------------------ATTA-----------GGTAAAACATGTCACAGGGAACACAAATCGAAGCAATAA--CAAG-----------TGTTGAGGAAGTGGATTTTTGAC-----------------------------------------------TGACTATATATACATACATATGTATGTACATATATTG----CTATATAGTGCTCGTCCGATTCGCAATTCTTGCTAATTTTCTGTA-CGGTACTG--GAAC----------A------TGAGTGTGTGTGTGTGTGT----------GTGTGTGTATAAC--AAAGCATGCCCAAATTTA-TTGAGCCAGTAATTTTCCACAAG-CAATTCACAAAAG------------------CC------GCCTGCCTGC
droPer2 scaffold_19:1214308-1214595 + TC---CGTATCTGTGCAAAAATTCGTATAAATTT--GT-------------------------ATTA-----------GGTAAAACATGTCACAGGGAACACAAATCGAAGCAATAA--CAAG-----------TGTTGAGGAAGTGGATTTTTGAC-----------------------------------------------TGACTATATATACATACATATGTATGTACATATATTG----CTATATAGTGCTCGTCCGATTCGCAATTCTTGCTAATTTTCTGTA-CGGTACTG--------------------------GTACATGAGTGTGTGT----------GTGTGTGTATAAC--AAAGCATGCCCAAATTTA-TTGAGCCAGTAATTTTCCACAAG-CAATTCACAAAAG------------------CC------GCCTGCCTGC
droWil2 scf2_1100000004511:2190468-2190512 + G---T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT----------G------TGTGTGTGTGTGTGTGTGT----------GTGTGTGTGTTTT--GTAGCGTG------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
T---TAATTTCTA-G-------------CTGCGTC------GT--A--TAAAACACCTTT--TTTTTGGTGTAATCCAGGTAAAAC----------------A----------ATAAAT----A-G-------------------------------TGGTCTCAAGTGCAATTCCATCGAACTT-----------------GC---------------------GGCTGTTCACTT-TTG----CTGA-----------ACAGTTTGCAATTCTTGTTAATTTAAC---ACT-TTCTATGGCGT----------GGGA------GTGTGTGTGTGTGTGA----------GTGTGTATATAAC--AAAGCATGCTAAAGTTGA-TTGAAGAAGGAATTTTCCACGAAACGTGTCA------------------------CA------GCGTTCCTGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................ATTCCATCGAACTT-----------------GC---------------------GGCTG....................................................................................................................................................................................................................................2112.00220000000000000000
.......TTTCTA-G-------------CTGCGTC------GT--A--TAAAACACC.................................................................................................................................................................................................................................................................................................................................................................................................................2612.00210000010000000000
..............G-------------CTGCGTC------GT--A--TAAAACACCT................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
............................................................................................................................................................................TTCCATCGAACTT-----------------GC---------------------GGCTGTT..................................................................................................................................................................................................................................2211.00100100000000000000
..........................................................................................................................................................................AATTCCATCGAACTT-----------------GC---------------------GGCTGC...................................................................................................................................................................................................................................2311.00100100000000000000
T---TAATTTCTA-G-------------CTGCGTC------GT--A--TAAAAC....................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................ATGCTAAAGTTGA-TTGAAGAAGG...............................................................2311.00101000000000000000
............A-G-------------CTGCGTC------GT--A--TAAAACAC..................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
............A-G-------------CTGCGTC------GT--A--TAAAAC....................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000010000000000
.......................................................................................................................................................................TGCAATTCCATCGAACTT-----------------G...............................................................................................................................................................................................................................................................1911.00110000000000000000
......ATTTCTA-G-------------CTGCGTC------GT--A--TAAAAC....................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.....AATTTCTA-G-------------CTGCGTC------GT--A--TA........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
droSec2
T---TAATTTGTA-G-------------CTGTGTC------GT--A--TAAAACACCTTT--TTTTTGGTGTAATCCAGGTAAAAC----------------A----------ATAAAT----A-G-------------------------------TGGTCTCAAGTGCAATTCCATCGAACTT-----------------GC---------------------GGCTGTTCACTT-TTG----CTGA-----------ACAGTTTGCAATTCTTGTTAATTTAAC---ACT-TTCTATGGCGT----------GGGAG--TGTGTGTGTGTGTGTGTGA----------GTGTGTGTATAAC--AAAGCATGCTAAAGTTGA-TTGAAGAAGGAATTTTCCACGAAACGTGTCA------------------------CA------GCGTTCCTGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................AC---ACT-TTCTATGGCGT----------GGGAG--TGTG....................................................................................................................................2511.0010001
.....AATTTGTA-G-------------CTGTGTC------GT--A--TAAA......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
........TTGTA-G-------------CTGTGTC------GT--A--TAAAACAC..................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
......ATTTGTA-G-------------CTGTGTC------GT--A--TAAAACAC..................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
...................................................................................................................................................................................................................................................................................................CT-TTCTATGGCGT----------GGGAG--TG......................................................................................................................................2011.0010100
......ATTTGTA-G-------------CTGTGTC------GT--A--TAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.....................................................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGA----------GTGTGTG....................................................................................................23200.0510001
dm3
T---TAATTTCTA-G-------------CTGCGGC------GT--A--TAAAACACCTTT-TTTTTTGGTGTAATCCAGGTAAAAC----------------A----------ATAAAC----A-G-------------------------------TGGTCTCAAATGAAATTCCATCGAACTT-----------------GC---------------------GGCTGTTCACTT-TTG----CTGA-----------ACAGTTTGCAATTCTTGTTAATTTAAC---ACT-TTCTATGGCGT----------GGGA--------------GTGTGTGT----------GTGTGTGTATAAA--AAAGCATGCTAAAGTTGA-TTGAAGAAGGAATTTTCCACGAAACGTGTCA------------------------CA------GCGTTCCTGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................AGGAATTTTCCACGAAACG...............................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTCTA-G-------------CTGCGGC------GT--A--TAAAACAC..................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AATTTCTA-G-------------CTGCGGC------GT--A--TAAAAC....................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TGTGTGT----------GTGTGTGTATAAA--AAA.........................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000
....TAATTTCTA-G-------------CTGCGGC------GT--A--TAAAACA...................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................AACACCTTT-TTTTTTGGTGTAATC..............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TCCATCGAACTT-----------------GC---------------------GGCTG....................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........TCTA-G-------------CTGCGGC------GT--A--TAAA......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
.......TTTCTA-G-------------CTGCGGC------GT--A--TAAAACA...................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................AAGCATGCTAAAGTTGA-TT.......................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........TCTA-G-------------CTGCGGC------GT--A--TAAAACACC.................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.................................................................TTGGTGTAATCCAGGTAAAAC----------------A----------.........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TTTGGTGTAATCCAGGTAAAAC----------------A----------.........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ATGGCGT----------GGGA--------------GTGTGTG......................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................CTATGGCGT----------GGGA--------------GTGTG........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTGCGGC------GT--A--TAAAACACCTTT-TT...........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
T---TAATTTCTA-G-------------CTGCGGC------GT--A--TAAAACAC..................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................ATGAAATTCCATCGAACTT-----------------GC---------------------GG.......................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................ATTCCATCGAACTT-----------------GC---------------------GGC......................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................GTAAAAC----------------A----------ATAAAC----A-G-------------------------------TGGTC........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.........TCTA-G-------------CTGCGGC------GT--A--TAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CTT-----------------GC---------------------GGCTGTTCACTT-TTG----CTGA-----------......................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AAATGAAATTCCATCGAACTT-----------------................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TTGA-TTGAAGAAGGAATTT..........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....AATTTCTA-G-------------CTGCGGC------GT--A--..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TGGCGT----------GGGA--------------GTGTGTGT----------GTG........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
T---TAATTTCTA-G-------------CTGCGGC------.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TTTTGGTGTAATCCAGGT.........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TTGGTGTAATCCAGGTAA.......................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTCCACGAAACGTGTCA------------------------CA------GC........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TGTGTGT----------GTGTGTGTATAAA--AAAA........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................ACCTTT-TTTTTTGGTGTAATCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......TTTCTA-G-------------CTGCGGC------GT--A--TAA.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TATGGCGT----------GGGA--------------GTGTGT.......................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.........TCTA-G-------------CTGCGGC------GT--A--TAAAACA...................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ATGGCGT----------GGGA--------------GTGTGTGT----------GT.........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TAAAGTTGA-TTGAAGAAGGAATTTT.........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTCTA-G-------------CTGCGGC------GT--A--TAAAACACC.................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ATTTCTA-G-------------CTGCGGC------GT--A--..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TTCTATGGCGT----------GGGA--------------GTGTGTG......................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AAAGCATGCTAAAGTTAC-.........................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................T----------GGGA--------------GTGTGTGT----------GTGTGTGT...................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................T----------GGGA--------------GTGTGTGT----------GTGTGTG....................................................................................................20100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................T----------GGGA--------------GTGTGTGT----------GTGTG......................................................................................................18150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GA--------------GTGTGTGT----------GTGTGTG....................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
T---TAATTTCTA-G-------------CTGCAGT------GA--A--AAAAACAGTTTTGTTTTTTGGGGTAATCCAGGTAAAAT----------------C----------ACAA--GAACACT-------------------------------ATTTCTCAATTGCAATTCCATTGAACTT-----------------GC---------------------GGTTGTTCACTTTTTG----CTAA-----------ATAGTTTGCGATTATTGTTAATCTAAC---ACT-TTCTATGCTGT----------GGGA------------------GTGT----------GTGTGTGTATAAC--AAAGCATGCTAGAGTTCATTTGAAGAAGGAATTTTCCACGAAACGTGTCA------------------------CT------GCGTTCCTGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................GA--A--AAAAACAGTTTTGTTTTTTGGGGT..................................................................................................................................................................................................................................................................................................................................................................................................2717.0070000007
...........................................................................................................................................................................ATTCCATTGAACTT-----------------GC---------------------GGTTGTT..................................................................................................................................................................................................................................2311.0010100000
...................................................................................................................................................................................................................................................................................TGTTAATCTAAC---ACT-TTCTAT..............................................................................................................................................................2111.0010100000
......................................................AGTTTTGTTTTTTGGGGTA.................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..........................................................................................................................................................................AATTCCATTGAACTT-----------------GC---------------------GGTTGTT..................................................................................................................................................................................................................................2411.0010100000
......................................................................................................................................................................................................................................................................................................TTCTATGCTGT----------GGGA------------------GTGT----------GTG........................................................................................................2211.0010010000
....TAATTTCTA-G-------------CTGCAGT------GA--A--AAAAAC....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
.............................TGCAGT------GA--A--AAAAACAGTTTTGT............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
....................................................ACAGTTTTGTTTTTTGGGGT..................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
.........................................................TTTGTTTTTTGGGGTAATCCAGG..........................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
...........................................................................................................................................................................ATTCCATTGAACTT-----------------GC---------------------GGTT.....................................................................................................................................................................................................................................2011.0010001000
......................................................AGTTTTGTTTTTTGGGGT..................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................................TCCACGAAACGTGTCA------------------------CT------GCGTT.....2311.0010000010
droYak3
T---TAATTTCTA-G-------------TTGCGGG------GA--A--TAAAACACCTTTTTTTTTTGGTGTAATCTAGGTAAAAT----------------C----------ATAAAT----A-G-------------------------------TAGTCTCAAGTGCAATTCCATCGAACTT-----------------GC---------------------GGTTGTTCACTTTTTG----CTGA-----------ATAGTTTCCAATTCTTTTTAATTTAAC---ACT-TTTTAGGCTGT----------GTGA------GTGGGT--GTGCGTGT----------GTGTGTGTATAAC--AAAGCATGCTAGAGTTCA-TTGAAGAAGGAATTTTCCATCAAACGTGTCA------------------------CT------GCGTTCCTGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................ATTCCATCGAACTT-----------------GC---------------------GGTTG....................................................................................................................................................................................................................................2111.00101000000000
..........................................................TTTTTTTTTGGTGTAATCT.............................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
...........................................................................................................................................................................ATTCCATCGAACTT-----------------GC---------------------GGTT.....................................................................................................................................................................................................................................2011.00100000010000
..............G-------------TTGCGGG------GA--A--TAAAACACCTTTTTTT..........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
........TTCTA-G-------------TTGCGGG------GA--A--TAA.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................GTATAAC--AAAGCATGCTAGAGT.............................................................................2211.00100000010000
.........................................................................................................................................................................................................................................................................................................................................GT--GTGCGTGT----------GTGTGTGT...................................................................................................18200.05100000010000
droEug1
TCGTTAATTTATA-T-------------CTGACGC------AAAAA-GGAAAACATATTT--TTTTGGGTGTAAACCAGGTACAAC----------------A----------ACATAT----A-G-------------------------------GTGTCTCAAGTAAAATTC-GTCGAATG--AGGGGA-CAAGTGTTTGC---------------------GGTTGTTCATTTATTG----CTGA-----------ATAGTTTGCAATTCTTATTAATTCGGC---ATA-TTTAATGGTGTGT----TTGTGGGTGTGCGTGTATGTATGTATATGT----------GTCTATGTATAAC--AAAGCATGATAATGTCGA-TTCAACAAGGAATTTTCCACGAAACGTGTCA------------------------GA------GCAT--TTGGSizeHit CountTotal NormTotal
No Reads
droBia1
T---TAGCTCCTA-G-------------CTGGCGAAACCGAGG--CGAACAAACATAT-----TTTGGCTGTAAACCAGGTAGAAT----------------A----------ACAA--CAAGAAG-----------TGGGCGGGTGGGCGTGCGGGATGTCTCAAGTGCAGTTC-GTCGAACG----TGGA-CAGGTGTTG-------------------------------------------C-----------------CTCTGCGGTTCCTGTTAATTGGGC---AAA-TTCCGTCGTTCGC----CCGTG---------CTCTGTGGGTGTCTGT----------GTGTCTGTATATC--AAGGCATGCTAG-GCTGA-TTGAGGCAGGAATTTTCCACGAAACGTGACA------------------------TCGCAGCAGCGT------SizeHit CountTotal NormTotal
No Reads
droTak1
TCGTTAATTTATA-G-------------CTGGCT--ATAGCAA--A--TAAAACATATTT---TTTGGGTGTAAACCAGGTACAAC----------------A----------AAA--TAAACA-ACGGGTGGGTGTGGAGGTGGGGG---------ATGTCTCAAGTGCAGTTC-GTCGAACG----TGGA-CAAGTGTT--------------------------------------TG----CTGA-----------ATAGTTTGCAATTCTTGTTAATTCGGC---AAAATTCCAGCGTTTGC----GTGTA----------TTTGTGTGTCTGTATATCTGTAT--GTGTCTGTA----------------------TA-TTGAACAAGGAATTTTCCACGAGACGTGTCA------------------------CC---------CGCCGCGSizeHit CountTotal NormTotal
No Reads
droEle1
TCGTTAATTTGT--G-------------CTGAGGC------AAAAA--TAAAACATATTT---TTTGGGTGTA-ACCAGGTACAAC----------------A----------A--AGT----G-G-------------------------------GTGTCTCAAGTGCCATTC-CTCGAACG----TGGA-CAAGTGTTTGC---------------------G---ATGCACTTACTG----CTGA-----------ATAGTTTGCAATTCTTGTTAATTTTGC---ATG-TAGCATGGTGT----------GCGT----GTGTGTGTGTGTGTGTGT----------GTGCCTGTATATC--AAAGCATGTTAAAGTTGA-TTGAACAAGGAATTTTCCACTAAGCGTTT-----------------------------------------TGCSizeHit CountTotal NormTotal
No Reads
droRho1
TCGTTAATTTGT--G-------------CTGAGGC------AGAAA--TAAAACATATTT---TTTGGGTGTAAACCAGGTACAAC----------------A----------A--AAT----G-G-------------------------------GTGTCTCAAGTGCAATTC-GTCGAACG----TGGACCAAGTGTTTGC---------------------G---GTTCACTTATTG----CTGA-----------ATACTTTGCAATTCTTGTTAATTTGGA---A--------------------------------------GTGCGTATGTGT----------GTGTCTGTATAAC--AAAGCATGCTAAAGTTGA-TTGAACAAGGAATTTTCCACGAAGCGTTT-----------------------------------------TGCSizeHit CountTotal NormTotal
No Reads
droFic1
TCATTAACTT--------------------GCGAC------AA--A--TAAAACATATTT---TTTGGTTGTAAACCAGGTACAAC----------------A-------------AAT----A-G-------------------------------GTGTCTCAAGTGCAATTC-GTCGAATG----TGGA-CAAGTGTTTGCT--------------------GGCGATTCACTTAATG----CTGAATA--------ATAGTTTGCAATTCTTGTTAATTTTGC---AAA-TTCCGTGGTGC----------GCGA------GTTTGTGTGTGTGTGTGTGTGTAT--GTTCCTGTATAACAAAAAGCACGCTAAAGTTGA-TTGGACAAGGAATTTTCCACAGAG-------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TG------------C-------------CGGACGC------GA--A--TTAAACACATTC---TTTGGGTGCAAACCAGGTGCAAT----------------T----------AAAATG----T-G---------------------------TGTGTCTCCTCTATTGGAATTT-ATCAAACG----TGGA-CAGGTGCTT---------------------------------TT---ATCAAAAGC-----------ATAGTTTACAATTCTTGGTTATTTCC----ATG-T-GCATGCC-CATAAGCGTGTA----------TCTGTGTGTGTGTGTGTGTTTGTGAATATGTGTATAAC--AAAGCATGCCAAAATGGA-TTGAAAAGGAAATTTTCCATTGAAAGATTAA------------------------GC--------GCGTCAGCSizeHit CountTotal NormTotal
No Reads
droAna3
T---TAAATTAAA-G-------------CCGCTGCGATATAAA--ATATTAAACATAT-----TTTGAGCTGAAACCAGGCGGAAA----------------A----------C-----------T-------------------------------TTCCACAAAGTGTAATTC-TGCGATAGCACAAGTC-CAAGTGTTT--------------------------------------T----CACG-----------GCAATTGGAAATTCTTGTTAATAGGCAGCA-AGTGATTG-------------------------GGTGGGTGGGTG-GTTG----------GTGTGCGAAAAAA--ATACAGTGCCGAAT-----TTCAGAAAGGAATTTTCCACGAG-CT-CCCACATACACCCACATAGTGAGATTAAATGTATCAGCGT---TGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................GTGGGTGGGTG-GTTG----------GTGTG......................................................................................................201187.00187710232145
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTTG----------G..........................................................................................................20336.331092102698
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTT......................................................................................................................18426.251051001499
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTTG----------...........................................................................................................19312.33370000433
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTTG----------GT.........................................................................................................21210.50211000614
.....................................................................................................................................................................................................................................................................................................................................GTGGGTGGGTG-GTTG----------GTGTGCA....................................................................................................2219.009100008
.....................................................................................................................................................................................................................................................................................................................................GTGGGTGGGTG-GTTG----------GTGT.......................................................................................................1918.008000008
.........................................................................................................................................................................................................................................................................................................TG-------------------------GGTGGGTGGGTG-GTTG----------G..........................................................................................................19105.10512001741
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTTG----------GTGTG......................................................................................................2415.005000005
....................................................................................................................................................................................................................................................................................................................................GGTGGGTGGGTG-GTTG----------GTGTGC.....................................................................................................2212.002000002
.....................................................................................................................................................................................................................................................................................................................................GTGGGTGGGTG-GTTG----------GTGTGA.....................................................................................................2112.002000002
......................................................................................................................................................................................................................................................................................................................................TGGGTGGGTG-GTTG----------GTGTG......................................................................................................1912.002200000
.....................................................................................................................................................................................................................................................................................................................................GTGGGTGGGTG-GTTG----------GTGTGC.....................................................................................................2112.002100001
........................................................AT-----TTTGAGCTGAAACCAGGCGGAAA----------------....................................................................................................................................................................................................................................................................................................................................................................2512.002200000
.........................................................................................................................................................................................................................................................................................................TG-------------------------GGTGGGTGGGTG-GTTG----------GTGTG......................................................................................................2312.002000011
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTTG----------GTG........................................................................................................2212.002000011
.....................................................................................................................................................................................................................................................................................................................................GTGGGTGGGTG-GTTG----------GTG........................................................................................................1851.809100008
.........................................................................................................................................................................................................................................................................................................TG-------------------------GGTGGGTGGGTG-GTTG----------...........................................................................................................18171.12190000019
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTTG----------GTGTGC.....................................................................................................2511.001000001
..........................................................................................................................................................................................................................................................................................................G-------------------------GGTGGGTGGGTG-GTTG----------GTG........................................................................................................2021.002000002
...............................................................TTTGAGCTGAAACCAGGCGGA......................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........................................................................AACCAGGCGGAAA----------------A----------C-----------T-------------------------------TTCCACAAAGT..................................................................................................................................................................................................................................................................................................2711.001010000
...................................................................................................................................................................................................................................................................................................AGTGATTG-------------------------GGTGGGTGGGTG-GT.......................................................................................................................2211.001000010
.....................................................................................................................................................................................................................................................................................................................................GTGGGTGGGTG-GTTG----------GTGTGCG....................................................................................................2211.001000001
.........................................................................................................................................................................................................................................................................................................TG-------------------------GGTGGGTGGGTG-GTTG----------GTGTGCG....................................................................................................2511.001000001
.........................................................................................................................................................................................................T--------------------------------------T----CACG-----------GCAATTGGAAATT.........................................................................................................................................................................................1911.001010000
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTTG----------GTGT.......................................................................................................2311.001000001
.................................................................TGAGCTGAAACCAGGCGGAAA----------------A----------C-----------T-------------------------------.............................................................................................................................................................................................................................................................................................................2411.001100000
.........................................................................AACCAGGCGGAAA----------------A----------C-----------T-------------------------------TTCCA........................................................................................................................................................................................................................................................................................................2111.001010000
........................................................AT-----TTTGAGCTGAAACCAGGC.........................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........TTAAA-G-------------CCGCTGCGATATAAA--AT...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.......................................................................................................................................................................................................................................................................................................ATTG-------------------------GGTGGGTGGGTG-GTTG----------GTGTGC.....................................................................................................2611.001000010
..............................................................................................................................................................................................................................................................................ATTCTTGTTAATAGGCAGC.........................................................................................................................................................................1911.001010000
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTTG----------GA.........................................................................................................2190.565000005
.......................................................................................................................................................................................................................................................................................................ATTG-------------------------GGTGGGTGGGTG-GTT......................................................................................................................1920.501000001
.........................................................................................................................................................................................................................................................................................................TG-------------------------GGTGGGTGGGTG-GTTG----------GTG........................................................................................................2120.501000010
.....................................................................................................................................................................................................................................................................................................................................GTGGGTGGGTG-GTTG----------GTGTA......................................................................................................2030.331000001
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTTG----------GTA........................................................................................................2230.331000001
.....................................................................................................................................................................................................................................................................................................................................GTGGGTGGGTG-GTTG----------GTGTT......................................................................................................2050.201000001
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTTG----------A..........................................................................................................2060.171000001
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTA......................................................................................................................18120.172000002
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTTT----------...........................................................................................................19140.142000002
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTTG----------T..........................................................................................................20150.132000011
........................................................................................................................................................................................................................................................................................................TTG-------------------------GGTGGGTGGGTG-GTC......................................................................................................................18100.101000001
..........................................................................................................................................................................................................................................................................................................G-------------------------GGTGGGTGGGTG-GTTG----------G..........................................................................................................18110.091000001
.....................................................................................................................................................................................................................................................................................................................................GTGGGTGGGTG-GTTG----------GTC........................................................................................................18200.051000001
....................................................................................................................................................................................................................................................................................................................................GGTGGGTGGGTG-GTTG----------GTC........................................................................................................19200.051000100
droBip1
AATTAAAGCC--------------------ACGGCTATATAAAAAA--TTAAATAAAT-----TTTAAGCTAAGACCAGGCGCAAA----------------A----------G-----------T-------------------------------TTCCACCAAGTGTAATTC-TGTGAATGCACGAGTA-CAGTTGTTG--------------------------------------G----CACT-----------GCAATTGGAAATTCTTGCCAATTCGTCGGA-AGTTACTA---------------------------------GGTGCTGCG----------GTGCATAAAAAAA--AAACAGTGCCGAAT-----TTCAGCAAGGAATTTTCCATGCCACCCAC-------------TTAGTGAGATTAAATACATCAGCG---TGGGSizeHit CountTotal NormTotal
No Reads
dp5
TC---CGTATCTGTGCAAAAATTCGTATAAATTT--GT-------------------------ATTA-----------GGTAAAACATGTCACAGGGAACACAAATCGAAGCAATAA--CAAG-----------TGTTGAGGAAGTGGATTTTTGAC-----------------------------------------------TGACTATATATACATACATATGTATGTACATATATTG----CTATATAGTGCTCGTCCGATTCGCAATTCTTGCTAATTTTCTGTA-CGGTACTG--GAAC----------A------TGAGTGTGTGTGTGTGTGT----------GTGTGTGTATAAC--AAAGCATGCCCAAATTTA-TTGAGCCAGTAATTTTCCACAAG-CAATTCACAAAAG------------------CC------GCCTGCCTGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................AAAAATTCGTATAAATTT--GT-------------------------ATTA-----------GGTT........................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
..................................................................................................................................................................................................................................................................................................................................TGAGTGTGTGTGTGTGTGT----------GTGTGTGT...................................................................................................27200.0510000001000
droPer2
TC---CGTATCTGTGCAAAAATTCGTATAAATTT--GT-------------------------ATTA-----------GGTAAAACATGTCACAGGGAACACAAATCGAAGCAATAA--CAAG-----------TGTTGAGGAAGTGGATTTTTGAC-----------------------------------------------TGACTATATATACATACATATGTATGTACATATATTG----CTATATAGTGCTCGTCCGATTCGCAATTCTTGCTAATTTTCTGTA-CGGTACTG--------------------------GTACATGAGTGTGTGT----------GTGTGTGTATAAC--AAAGCATGCCCAAATTTA-TTGAGCCAGTAATTTTCCACAAG-CAATTCACAAAAG------------------CC------GCCTGCCTGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................GAGGAAGTGGATTTTTGAC-----------------------------------------------TGACT.........................................................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................................................................................................................................................................................................................................CATGCCCAAATTTA-TTGAGC...................................................................2011.001000100
droWil2
G---T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT----------G------TGTGTGTGTGTGTGTGTGT----------GTGTGTGTGTTTT--GTAGCGTG------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGT----------GTGTGTGTGTTT...............................................................................................23200.05101000
.....................................................................................................................................................................................................................................................................................................................................GTGTGTGTGTGTGTGT----------GTGTGTGT...................................................................................................24200.05100100

Generated: 05/21/2015 at 03:53 PM