ID:

dsi_17165

 Coordinate:

2l:16224033-16224182 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.0 -10.4 -10.1 -10.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATCAGTTTGTTTTTAGTCGTCGGCCTGTTCTTTTGCGAGATATTTTTAGCCAGCGTGTATAAGTTGACGTGGAATTCGATTCTTTCAGTCAAATAAGAATGGATGGTTCGAAGAAAACGCTGCTTATTAAAGTAAAAATTAGATTGTAACCAACTAAATGCTGAACTTGATAATTAAGTGCAATTTTGAACACCTTTCAGATAAGCGCGAATGGCACTTCGCATTTCTACACCCCGGTGGCGGGCTATCC
********************************************************************************************.........................(((...(((((.((((.....((((.(((....))))))).......)))))))))....)))********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 O002
Head
 M023
head
 M053
female body
..................................................................................................ATGGATGGTTCGAAGG........................................................................................................................................ 16 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.................................................................................................AATGGATTGATCGAAGAAAA..................................................................................................................................... 20 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.....................................................................TGGAATTCGATTCTTTCAGTCAAAGA........................................................................................................................................................... 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
............................................................................................ATAAGAATGGATGGTTCGAAGAAAACGC.................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CTTTCAGATTAGCGTGAAT...................................... 19 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................ATGCTGAACTTGATAATTAAGTG...................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................TTCGATTCTTTCAGTCAAATAAGA........................................................................................................................................................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................................................TTCAGTCAAATAAGAATGGATGGTTC............................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....................................................CGTGTATAAGTTGACGTGGAATTCGA........................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................................................TTCAGTCAAATAAGAATGGATGGTTCGAA.......................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..........................................................................................................TTTGAAGAAAACGCGGGTTATT.......................................................................................................................... 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..........TTTTAGTCGTCGGCCTGTTCT........................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........TTTAGTCGTCGGCCTGTTCC........................................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................ATGGATGGTTCGAAGAAAA..................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................TTCATAAGCGCGAATGGCACTTCG............................. 24 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................ATGGGTCGATGAAAACGC.................................................................................................................................. 18 2 4 0.75 3 0 1 0 0 0 0 0 2 0 0
.................................................................................................AATGGATTGATCGAAGAAA...................................................................................................................................... 19 2 4 0.50 2 2 0 0 0 0 0 0 0 0 0
................................................................................................AAATGGATTGATCGAAGAAAA..................................................................................................................................... 21 3 15 0.27 4 4 0 0 0 0 0 0 0 0 0
.................................................................................................AATGGATTGATCGAAGAAAAA.................................................................................................................................... 21 3 17 0.24 4 4 0 0 0 0 0 0 0 0 0
........................................................................................................GGTTCTAGGAAAACGCT................................................................................................................................. 17 2 14 0.21 3 0 0 1 0 0 0 2 0 0 0
.........................................................................................................................................................CTAAAGGCTGAAGTTGACAA............................................................................. 20 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................ATTAGATTGTACACAACT............................................................................................... 18 2 10 0.10 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................AAAATGGATTGATCGAAGAAAA..................................................................................................................................... 22 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................ATGGACGGTACGAAGAAA...................................................................................................................................... 18 2 17 0.06 1 0 0 0 0 1 0 0 0 0 0
......................GCCAGATCTTTTGCGCGAT................................................................................................................................................................................................................. 19 3 18 0.06 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................TGCATGGTTCGACGAAAA..................................................................................................................................... 18 2 19 0.05 1 0 0 1 0 0 0 0 0 0 0
..............................................................GTTGACGTGGAATCTGATC......................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................GAACTTGATTATTTAGTCC..................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CGCCTCGGTGGCGCGCTA... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
.........................................................................................................GTTTGAAGAAAACGC.................................................................................................................................. 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCAGATAAACTCGAATGCC................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TAGTCAAACAAAAATCAGCAGCCGGACAAGAAAACGCTCTATAAAAATCGGTCGCACATATTCAACTGCACCTTAAGCTAAGAAAGTCAGTTTATTCTTACCTACCAAGCTTCTTTTGCGACGAATAATTTCATTTTTAATCTAACATTGGTTGATTTACGACTTGAACTATTAATTCACGTTAAAACTTGTGGAAAGTCTATTCGCGCTTACCGTGAAGCGTAAAGATGTGGGGCCACCGCCCGATAGG
**********************************************************************.........................(((...(((((.((((.....((((.(((....))))))).......)))))))))....)))******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
.........AAAAACTAGCAGCCTGACAA............................................................................................................................................................................................................................. 20 3 8 10.25 82 68 14 0 0 0 0 0 0 0
..........AAAACTAGCAGCCTGACAA............................................................................................................................................................................................................................. 19 3 20 3.75 75 68 7 0 0 0 0 0 0 0
.........AAAAACTAGCAGCCTGACAAGAA.......................................................................................................................................................................................................................... 23 3 1 3.00 3 3 0 0 0 0 0 0 0 0
.........AAAAACTAGCAGCCTGACAAGA........................................................................................................................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0
........CAAAAACTAGCAGCCTGACAA............................................................................................................................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................CTCGGTCGCAGATATCCAACT....................................................................................................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0
.............ACTAGCAGCCTGACAAGAAAA........................................................................................................................................................................................................................ 21 3 2 1.00 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................AGATGTAGGGCCAACGCC....... 18 2 3 1.00 3 0 0 0 2 1 0 0 0 0
.........AAAAACTAGCAGCCTGACAAGAAA......................................................................................................................................................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.........AAAAACTAGCAGCCGGACAA............................................................................................................................................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0
................AGCAGCCTGACAAAAAAA........................................................................................................................................................................................................................ 18 2 9 0.78 7 7 0 0 0 0 0 0 0 0
..........ACAATCAGCAGCCTGACAACA........................................................................................................................................................................................................................... 21 3 4 0.50 2 2 0 0 0 0 0 0 0 0
.................................................GGTCGCAGATATCCAACT....................................................................................................................................................................................... 18 2 4 0.50 2 0 0 2 0 0 0 0 0 0
............AATCAGCAGCCTGACATCAAA......................................................................................................................................................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0
.............ACTAGCAGCCGGACAAAAAAA........................................................................................................................................................................................................................ 21 3 5 0.40 2 1 1 0 0 0 0 0 0 0
.............ATTAGCAGCCTGACAAAAAA......................................................................................................................................................................................................................... 20 3 11 0.27 3 0 3 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TAGATGTAGGGCCAACGCC....... 19 3 13 0.23 3 0 0 0 3 0 0 0 0 0
...........AAACCAGCAGCCTGACAA............................................................................................................................................................................................................................. 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0
...............TAGCAGCCGGACAAAAAA......................................................................................................................................................................................................................... 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0
.........................................................................TCAGGTAAGAAAGTAAGTTTA............................................................................................................................................................ 21 3 7 0.14 1 0 0 0 0 0 1 0 0 0
....................................................................................................................................................TGGGTGATTTACGACGTG.................................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 1 0 0
.................................................................................................................................................CACGGGTTGATTTACGAC....................................................................................... 18 2 8 0.13 1 0 0 1 0 0 0 0 0 0
................AGCAGCCTGACAAGACA......................................................................................................................................................................................................................... 17 2 8 0.13 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GAAAGTCTATTCCCG.......................................... 15 1 8 0.13 1 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................GAAAGTCTATTCCCGAT........................................ 17 2 9 0.11 1 0 0 0 1 0 0 0 0 0
..........AAAATGATCAGCCAGACAA............................................................................................................................................................................................................................. 19 3 10 0.10 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................TCACTGGTTGACTTACGAC....................................................................................... 19 3 20 0.10 2 0 0 0 0 0 2 0 0 0
...................................................................................AAGTTAGGTTATTCTTAC..................................................................................................................................................... 18 2 11 0.09 1 0 0 1 0 0 0 0 0 0
..........AAAAACAGCAGCCTGACA.............................................................................................................................................................................................................................. 18 2 12 0.08 1 1 0 0 0 0 0 0 0 0
...............TAGCAGCCTGACAAGAAAAA....................................................................................................................................................................................................................... 20 3 13 0.08 1 1 0 0 0 0 0 0 0 0
..............CTAGCAGCCTGACAAGAAA......................................................................................................................................................................................................................... 19 3 14 0.07 1 0 1 0 0 0 0 0 0 0
..............TTAGCAGCCTGACAAAAAAA........................................................................................................................................................................................................................ 20 3 15 0.07 1 0 1 0 0 0 0 0 0 0
..............ATAGCAGCCTGACAAGAAA......................................................................................................................................................................................................................... 19 3 16 0.06 1 1 0 0 0 0 0 0 0 0
...........AAAACAGCAGCCTGACAA............................................................................................................................................................................................................................. 18 2 19 0.05 1 1 0 0 0 0 0 0 0 0
.................GCAGCCTGACAAAAAAA........................................................................................................................................................................................................................ 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0
..........AAACTAAGCAGCCTGACAA............................................................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
...............TAGCAGCCTGACAACAAAA........................................................................................................................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
............GATCAGCAGCCTGACA.............................................................................................................................................................................................................................. 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................CGCTAAGAAGGTCAGTT.............................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1
....................................................................................................................................................GGGTTGATTTACGAC....................................................................................... 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0
.................................................................................GTAAGTTAGGTTATTCTTAC..................................................................................................................................................... 20 3 20 0.05 1 0 0 1 0 0 0 0 0 0
.............ATTAGCAGCCGGACAAC............................................................................................................................................................................................................................ 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:16223983-16224232 + dsi_17165 ATCAGT---TTGTT---TTTAGTCGTCGGC--------CTGTT-CTT--TTG-------CGAGATATTTTTAGCCAG---CGTGT--AT------AAGTTGACGTGGA-ATTCGAT------------------TCTTTC--AGTCAAATAAGAATGGATGG---TTCGAAGAAA---------------ACGC-----------------TGCTTATTAAAGTAAA------------------------------------------------AATTAGATTGTAAC-CAACTAAA------TGCTGAACTTGATAATTAAGTGCAAT-----------TTTGA----ACA-CCTTTCAGATAAGCGCGAATGGCACTTCGCATTTCTACACCCCGG---TGGCGGGCTATCC---
droSec2 scaffold_7:304298-304546 + ATCAGT---TTATT---TTTAGTCGTCGGC--------CTGTT-CTT--TTG-------CGAGATATTTTTAGCCAG---CGTGT--AT------AAGTTGACGTGGA-ATTCGAT------------------TCTTTC--AGTCAAATAAGAATGGATGG---TTCGAAGAAA---------------ACGC-----------------TGCTTTTTAAAGTAAA------------------------------------------------AATTAGATTGT-AC-CAACTTAA------TGCTGAACTTGATAATTAAGTGCAAT-----------TTTGA----ACA-CCTTTCAGATAAGCGCGAATGGCACTTCGCATTTCTACACCCCGG---TGGCGGGCTATCC---
dm3 chr2L:16657299-16657548 + ATCAGT---TTGTT---TTTAGTCGTCGGC--------CTGTT-CTT--TAG-------CGAGATATTTTTAGCCAG---CGTGT--AT------AAGTTGACGTGGA-ATTCGAT------------------TCGTTC--AGTCAAATAAGAATGGATGG---TTCAAAGAAA---------------ACGC-----------------TGCTCATTAAAGTAAA------------------------------------------------AATTAGATTGAAAC-CAACTGAA------TGCTGAACTTGATAATTAAGTGCAAT-----------TTTGA----ATA-CCTTCCAGATAAGCGCGAACGGCACTTCGCATTTCTACACTCCGG---TGGCGGGCTATCC---
droEre2 scaffold_4845:19727706-19727963 + ATCAGT---TTGTT---TTTAGTCGACGGC--------CTGTT-CTT--TTG-------CGAGATATTTATAGCCAG---CGTGT--AA------AAGTCGACGTGGA-CTTCAAG------------------TCTTTC--AGTTGAATGAGCATGGCAGA---CTCACAGAAAA------CGGGAAAAACGC-----------------TGCTTATTAAAGTACA-------------------------------------------------ATTTGGTTATAAC-TAACTAAA------TGCTGAGCAGGTTACTTAAGTGGCAT-----------TTTGA----ATA-CGTTTCAGATAAGCGCGAATGGCACCTCGCATTTCTACACTCCGG---TGGCGGGCTATCC---
droYak3 2R:4446017-4446274 - ATCAGT---TTGTT---TTTAGTCGACGGC--------CTGTT-CTT--TTG-------CGAGATATTTATAGCCAG---CGTGT--AA------AAGTTGACGTGGA-AGTAAGG------------------TCTTTC--AGTCAAATAAGCATGGAAGA---TTCAAAGAAAA------CGGGAAAAACGC-----------------TGCTTATTAAAGTAAA-------------------------------------------------ATTAGAGTATAAA-TAACTAAT------TGATGAACAGGATAATAAAGTGCAAT-----------TTCAA----ATA-CCTTCCAGATAAGCGCGAATGGCACATCGCACTTCTACACCCCGG---TGGCCGGATATCC---
droEug1 scf7180000408961:226431-226682 + ATCAAT---T-------TTTAG---TCGGC--------GTGTCTCTT--TCG-------CGAGATATTTTTAGTCTG---TGTGT--TAA-----ATGCCGACGTGGT-GTTTC----AAAA--A--TATA--ATATTTT--A------AGAAAATGGAAGA---CTCAAAGAAAT------CGAGCAAAACGC-----------------TGCTTATTAAAGTAATTAT------------------------TTT------------CG----------------ATTCACTTTAA------CGTTTAATATGATTAATGAATGAATT-----------TTTAA----T-C-ATTTACAGATAAGCGCGAATGGCACTTCGCATTTCTATACCCCTG---TGGCAGGTTATCC---
droBia1 scf7180000301468:806640-806912 + ATCAGC---TTGACTTTTTTAG---TCG-C--------GTGTTTGTT--TCG-------AGAGATATTTTTAGCCAG---CGTGT--AAA-----ATGTTGACGTGGT-ACATTT---AAAT--A--TACACAATAATTATAAATGAAACGGAAATGGAGGA---GGCCAATAAAA------CCGGCAAGAGGC-----------------TGCTTATAAAAGTAATATC------------------------CTAGG-----------G----------------ATTCTTTTAAC-T----TGTTTAACAGGCTAACTAACTGAGAT--------GCTTTT------GTA-TCTTTCAGATAAGCGCGAATGGCACTTCGCATTTCTACACCCCGG---TGGCGGGCTATCC---
droTak1 scf7180000415914:371180-371442 + ATCAGT---TCTTT-TTTTTAG---AC------------------------G-------CGAGATATTTTTAGCCAG---CGTGT--TAAATTAAATGTTGACGTGGT-GTTTTT---AGAA--ATATATG--ATCTTTT--AATGAAACCACAATGGAGGA---TCCTAAGAAAA------CGGGCAAAACGC-----------------TGCTTATTAAAGTAATTTT------------------------AACGG-----------G----------------ATATTTTTAAA------TATTTAACTGGGTAATTAAATATAAT-----------TTGTT--GTTTATTTTTACAGATAAGCGCGAATGGCACTTCGCATTTCTATACCCCGG---TGGCTGGTTATCC---
droEle1 scf7180000490579:693408-693678 - ATCAGT---TAGTT-TTTTTAG---TCGGC--------GTGGT-TTTGGTGG-------CGAGATATTTTTAGCCAG---CGTGT--TAA-----ATGTTGACGTGGT-ATTTTT---AAAA--A--TATA--TTCTCTC--AATGAAACGGAAATGGAGGT---GCCAAAGAAAT------CGGGAAAAACGT-----------------TGCTTATTAAAGTAATTGC------------------------TTA------------AA----------------ACTTATCCTAA------TGTTTTACAGAATTATTTAATGTAAT-----------TTCAATTGTTTT-TTTTACAGATAAGCGCAAATGGCACTTCGCATTTCTACACCCCAG---TGGCGGGTTATCC---
droRho1 scf7180000777347:42745-43007 - ATCAGT---TAGTT--TTTTG---GTCGGC--------GTGTTTCGG--TGG-------CAAGATATTTTTAGCCAG---CGTGT--TAA-----ATGTTGACGTGGT-GTTTT----AAAA--A--TATA--GTCTCTC--AATGAAACGAAAATGGAGGA---GTCAAGGAAAA------CGTCGAATACGC-----------------TGCTTATTAAAGTACTTGC------------------------TTA------------AG----------------ATAAATTTAAA------TGTTTTACAGAATTACTAAATGTATT-----------GTT-A----ATA-TTTTACAGATAAGCGCAAACGGCGCTTCGCATTTCTACACCCAAG---TGGCGGGTTATCC---
droFic1 scf7180000454078:583573-583830 + ATCAAT---TT-T---TTTTAG---CCGAC--------GTAT-------TCG-------CGAGATATATTTAGCCAG---CGTGT--TA------AATGTGACGTGGT-GTTTC----AAAT--A--AAT-----GAATG--AATGAAACAACGATGGAGGA---TTCAAAGCAGA------AAGGAAAAACGC-----------------TTCTTATTAAAGTACTTTT-----------GT-----------TTA-----------------------TAGTTTACA-TAGATAAA------CA-TTTACATGGTTATTAAATGTCTT-----------CTTCC----ATG-TATTGCAGATAAGCGCCAATGGCACTTCGCATTTTTACACCCCAG---TGGCGGGATATCC---
droKik1 scf7180000302382:479465-479759 + ATCAGT---G---------------TCGGCGTTGTAGTGTGTT-TTTTACGAGCCGCAGACAGATATTTATAGCCAG---CGTGGA-CAA-----AAGTTGACGTGGT-ACTTGTCTTAGAG--A--GA-----TCTTTC--CATG---TGGAAATGGAGGAGCAGCCAGGGAATA------GTG--AAAAGGCAACCAGGACAACCCGAGTGGTTTTTAAAGTACTT----------------------------------------------------AATTGTTAT-TAATTAAATATAAAT-----ATATGATATATTAATACATTTATTTGTTC--CTTTA----C-T-ATTTCCAGATAAGCGCCAATGGCACTTCGCATTTCTACACCCCAG---TGGCAGGTTTTCC---
droAna3 scaffold_12916:15905160-15905440 - ATCAGTAGTTTGAT--TTTCT---GCCAGT--------GTGTT-GTTTCCTA-------GAATATATTTATAGCCAG---CGTGT--CTT-----GAGGCGACGTGGT-ACTTTC---TG-TCCATTTCTC--TTCCATC--TATG---ACAAAATGGAACA---GCCCAAGAAAA------GCGAGCGGACTG-----------------TGCTGATAAAAGTATTGGTTTTTCCTTATAGATTTTAGTTTTTATCGGTTT------------------------------TCTATT------TAC---------TAAACAAGAATACC-----------CTTGA----AT--ATTTGCAGATAAGCGCCAATGGCACATCGCATTTCTATACGCCAG---TGGCGGGTTATCC---
droBip1 scf7180000396717:144200-144482 - ATCAGTAGTTCGAT-TTTTTT---GCCAGT--------GTGTT-GTTTCCTA-------AAAGATATTTATAGCCAG---CGTGT--CTT-----AAGTCGACGTGGT-ACTTTC---TG-ACCATCTTTC--CACCACT--TATG---ACAGCATGGAACA---GTCCACGAAAA------GCGAGAGAACAG-----------------TGCTAATTAAAGTATTGGTTTTTCCTTATAGATTTTAGTTTTTATCGGTCT------------------------------TCTATT------TAC---------TAACAAACAATTAT--------C--CTCCA----AT--ATTTCCAGATAAGTGCCAATGGCACTTCGCATTTCTACACGCCAG---TGGCGGGCTATCC---
dp5 4_group3:8398809-8398871 + C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CTCCACAGATAAGCGCCAATGGTACATCGCATTTCTATACGCCGGCAATGGCCGGCTATCC---
droPer2 scaffold_1:9847883-9847945 + C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CTCCACAGATAAGCGCCAATGGTACATCGCATTTCTATACGCCGGCCATGGCCGGCTATCC---
droWil2 scf2_1100000004945:922307-922358 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATAAGCGCCAATGGAACATCGCATTTTTATACGCCGG---TGGCTGGCTATCC---
droVir3 scaffold_12963:12891329-12891396 - ATT---------------TTAT---T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC-GCTTTCAGATAAGCAGCAATGGCACATCGCATTTTTATACGCCGC---TGCCTGGCTATCC---
droMoj3 scaffold_6500:7172909-7173144 + GTTGGT---TTATT---TATAGT---TG-------------TA-CTT--T---------------------------------------------TCGTTGACGTGGATACTTTT---CGCA--G--TGTC--AGCTAGC--AATGAAGCCGCAA--------------AAGATTAAATCAACAACGACCACGT-----------------CGACAACAACAGAATCTGT------------------------ATT-----TATTTTACAACAAAATTTGACTA----------------------TTCGCAGTTTCATTAA-AGCATT-----------TTGCA--A-CTC-GTTTTCAGATAAGCAGCAATGGTACATCGCATTTCTATACGCCGC---TGCCCGGCTATCCGCC
droGri2 scaffold_15203:8773659-8773777 - GTT--------------TTTAGCCGCTGGC--------CTTTT-TTT--TTG-------TTTGATGTTTTGGGCCACACACGTCAATAA------AAGTCGAC-TGAA-ATTTGATGCACAG--------------ATGC--AGGTGAATGGGCCCAGATGA---TGTGAAGGAC---------------ATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATCAGT---TTGTT---TTTAGTCGTCGGC--------CTGTT-CTT--TTG-------CGAGATATTTTTAGCCAG---CGTGT--AT------AAGTTGACGTGGA-ATTCGAT------------------TCTTTC--AGTCAAATAAGAATGGATGG---TTCGAAGAAA---------------ACGC-----------------TGCTTATTAAAGTAAA------------------------------------------------AATTAGATTGTAAC-CAACTAAA------TGCTGAACTTGATAATTAAGTGCAAT-----------TTTGA----ACA-CCTTTCAGATAAGCGCGAATGGCACTTCGCATTTCTACACCCCGG---TGGCGGGCTATCC---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................ATGGATGG---TTCGAAGG.....................................................................................................................................................................................................................................................1612.00200000000002000000
....................................................................................................................................................ATAAGAATGGATGG---TTCGAAGAAA---------------ACGC-----------------...............................................................................................................................................................................................................2811.00100000000000001000
.........................................................................................................................................................................................................................................................................................................A------TGCTGAACTTGATAATTAAGTG............................................................................................2311.00101000000000000000
..............................................................................................................TTCGAT------------------TCTTTC--AGTCAAATAAGA........................................................................................................................................................................................................................................................................2411.00100000001000000000
.........................................................................................................................................TTC--AGTCAAATAAGAATGGATGG---TTC..........................................................................................................................................................................................................................................................2611.00100000001000000000
................................................................................CGTGT--AT------AAGTTGACGTGGA-ATTCGA...............................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.........................................................................................................................................TTC--AGTCAAATAAGAATGGATGG---TTCGAA.......................................................................................................................................................................................................................................................2911.00100000000100000000
.............T---TTTAGTCGTCGGC--------CTGTT-CT....................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.................TTTAGTCGTCGGC--------CTGTT-CC....................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
..........................................................................................................................................................ATGGATGG---TTCGAAGAAA---------------A...................................................................................................................................................................................................................................1911.00100000000000100000
droSec2
ATCAGT---TTATT---TTTAGTCGTCGGC--------CTGTT-CTT--TTG-------CGAGATATTTTTAGCCAG---CGTGT--AT------AAGTTGACGTGGA-ATTCGAT------------------TCTTTC--AGTCAAATAAGAATGGATGG---TTCGAAGAAA---------------ACGC-----------------TGCTTTTTAAAGTAAA------------------------------------------------AATTAGATTGT-AC-CAACTTAA------TGCTGAACTTGATAATTAAGTGCAAT-----------TTTGA----ACA-CCTTTCAGATAAGCGCGAATGGCACTTCGCATTTCTACACCCCGG---TGGCGGGCTATCC---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................ATGGATGG---TTCGAAGAAA---------------ACGC-----------------TGCT...........................................................................................................................................................................................................2612.0020020
...............................................................................................AAGTTGACGTGGA-ATTCGAT------------------TC..........................................................................................................................................................................................................................................................................................2211.0010010
.................................................................................GTGT--AT------AAGTTGACGTGGA-ATTCG................................................................................................................................................................................................................................................................................................................2411.0010010
................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTACACCCCGG---TGGCGGGC........2311.0010010
.............................................................................................................................................................................................................................................................................................................................AATTAAGTGCAAT-----------TTTGA----ACA-CCTTTCAG........................................................2911.0011000
............................................................................................................................................................GGATGG---TTCGAAGAAA---------------ACGC-----------------TGCT...........................................................................................................................................................................................................2411.0010010
..........................................................................................................................................................ATGGATGG---TTCGAAGAAA---------------A...................................................................................................................................................................................................................................1911.0010010
.............................................................................................................................................................GATGG---TTCGAAGAAA---------------ACG.................................................................................................................................................................................................................................1811.0011000
...........ATT---TTTAGTCGTCGGC--------CTGTT-......................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..........................................................................................................................................................ATGGATGG---TTCGAAGAAA---------------ACGC-----------------...............................................................................................................................................................................................................2211.0010010
.................TTTAGTCGTCGGC--------CTGTT-CTT--TTG-------CGA....................................................................................................................................................................................................................................................................................................................................................................2711.0010100
..........................................................................................................................................................ATGGATGG---TTCGAAGAAA---------------ACG.................................................................................................................................................................................................................................2111.0010100
dm3
ATCAGT---TTGTT---TTTAGTCGTCGGC--------CTGTT-CTT--TAG-------CGAGATATTTTTAGCCAG---CGTGT--AT------AAGTTGACGTGGA-ATTCGAT------------------TCGTTC--AGTCAAATAAGAATGGATGG---TTCAAAGAAA---------------ACGC-----------------TGCTCATTAAAGTAAA------------------------------------------------AATTAGATTGAAAC-CAACTGAA------TGCTGAACTTGATAATTAAGTGCAAT-----------TTTGA----ATA-CCTTCCAGATAAGCGCGAACGGCACTTCGCATTTCTACACTCCGG---TGGCGGGCTATCC---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................T--AT------AAGTTGACGTGGA-ATTCGAT------------------TCG.........................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................GAATGGATGG---TTCAAAGAAA---------------ACGC-----------------T..............................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................TTTTTAGCCAG---CGTGT--AT------AAG................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TGACGTGGA-ATTCGAT------------------TCGTTC--AGTC................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ATATTTTTAGCCAG---CGTGT--AT------AAGT...............................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................TAGCCAG---CGTGT--AT------AAGTTGACGTGG.......................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000
.......................................................................................AT------AAGTTGACGTGGA-ATTCGA...............................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
ATCAGT---TTGTT---TTTAGTCGT........................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTACACTCCGG---TGGCGGGCT.......2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTCGCATTTCTACACTCCGG---TGGCGGGC........2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TTTTTAGCCAG---CGTGT--AT------AAGTTGA............................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................ATGGATGG---TTCAAAGAAA---------------ACGC-----------------T..............................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000000
.......................................................................................................GTGGA-ATTCGAT------------------TCGTTC--A...................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
ATCAGT---TTGTT---TTTAGTCGTCGGC--------C...........................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000000000000000000
.................................................................................GTGT--AT------AAGTTGACGTGG.......................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................TGGA-ATTCGAT------------------TCGTTC--AGTCAAATAA..........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AAAGAAA---------------ACGC-----------------TGCTCATT.......................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TCGCATTTCTACACTCCGG---TGGCGG..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GTTC--AGTCAAATAAGAATGGATGG---T............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
................................................................................................AGTTGACGTGGA-ATTCGAT------------------TCGT........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TC--AGTCAAATAAGAATGGATGG---TT...........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAGCGCGAACGGCACTTCGCATTTCT............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAGCGCGAACGGCACTTCGC..................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TAGATTGAAAC-CAACTGAA------TGCTGA............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................T--AT------AAGTTGACGTGGA-ATTC.................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ATCAGT---TTGTT---TTTAGTCGTC.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................T--TAG-------CGAGATATTTTTAGCCAG---CGTG..............................................................................................................................................................................................................................................................................................................................................2611.0010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TCGCATTTCTACACTCCGG---TGGCGGG.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................ATTAGATTGAAAC-CAACTGAA------..................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AATGGATGG---TTCAAAGAA....................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ATATTTTTAGCCAG---CGTGT--AT------A..................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................ACACTCCGG---TGGCGGGCTATCC---2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TTCAAAGAAA---------------ACGC-----------------TGCTCATTAAAGT..................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GATATTTTTAGCCAG---CGTGT--AT------AAGTT..............................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................TTTTAGCCAG---CGTGT--AT------AAGTTGACG..........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
..............................................................................................................................................AGTCAAATAAGAATGGATGG---.............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................................................................................AAATAAGAATGGATGG---TTCAAAG......................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..........................CGGC--------CTGTT-CTT--TAG-------CGA....................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CTCCGG---TGGCGGGCTATA....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TGCAAT-----------TTTGA----ATA-CCTTCCAG........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TTC--AGTCAAATAAGAATGGATGG---TT...........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................T-----------TTTGA----ATA-CCTTCCAGATAAGCGCGAAC............................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................ATGG---TTCAAAGAAA---------------ACGC-----------------TGCTC..........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ATATTTTTAGCCAG---CGTG..............................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................AAC-CAACTGAA------TGCTGAACTTGATAAT..................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CAG---CGTGT--AT------AAGTTGACGTGGA-.....................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TGAA------TGCTGAACTTGATAATTAAGTGC...........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TTTCTACACTCCGG---TGGCGG..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................CGTGT--AT------AAGTTGACGTGGA-ATTCGAT------------------............................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GTTGACGTGGA-ATTCGAT------------------............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AATTAAGTGCAAT-----------TTTGA----ATA-CCTT............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................ATGGATGG---TTCAAAGAAA---------------ACG.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................GTGT--AT------AAGTTGACGTGGA-.....................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCAGT---TTGTT---TTTAGTCGTCGGC--------CT..........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTTAGCCAG---CGTGT--AT------AAGTTGACG..........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................AAGCGCGAACGGCACTTCG...................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AT------AAGTTGACGTGGA-ATT..................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
............................................................GAGATATTTTTAGCCAG---CGTG..............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TACACTCCGG---TGGCGGGCTAT.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.................................................TAG-------CGAGATATTTTTAGCCAG---CGTG..............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TTTCTACACTCCGG---TGGCGGGC........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TGGATGG---TTCAAAGAAA---------------ACGC-----------------TGCT...........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................AAGCGCGAACGGCACTTCGCA.................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....GT---TTGTT---TTTAGTCGTCGGC--------............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GTTC--AGTCAAATAAGAATGGATGG---TT...........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................AGTCAAATAAGAATGGATG.................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AGT---TTGTT---TTTAGTCGTCGGC--------CTG.........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TTTCTACACTCCGG---TGGCGGGCTA......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TAAGAATGGATGG---TTCAAAGA.....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TAGTCGTCGGC--------CTGTT-CTT--TAG-------CGAG...................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGTCGTCGGC--------CTGTT-CTT--.................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................AAGTTGACGTGGA-ATTCGAT------------------............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTCGCATTTCTACACTCCGG---TGGCGG..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................CATTTCTACACTCCGG---TGGCG...........2111.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CAAATAAGAATGGATGG---T............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....T---TTGTT---TTTAGTCGTCGGC--------............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...AGT---TTGTT---TTTAGTCGTCGGC--------CT..........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................A-ATTCGAT------------------TCGTTC--AGTCAA..............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CTCCGG---TGGCGGGCTATC....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ACGTGGA-ATTCGAT------------------TCGTTC--A...................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CGCATTTCTACACTCCGG---T...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AT------AAGTTGACGTGGA-ATTATC...............................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATCAGT---TTGTT---TTTAGTCGACGGC--------CTGTT-CTT--TTG-------CGAGATATTTATAGCCAG---CGTGT--AA------AAGTCGACGTGGA-CTTCAAG------------------TCTTTC--AGTTGAATGAGCATGGCAGA---CTCACAGAAAA------CGGGAAAAACGC-----------------TGCTTATTAAAGTACA-------------------------------------------------ATTTGGTTATAAC-TAACTAAA------TGCTGAGCAGGTTACTTAAGTGGCAT-----------TTTGA----ATA-CGTTTCAGATAAGCGCGAATGGCACCTCGCATTTCTACACTCCGG---TGGCGGGCTATCC---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................CACAGAAAA------CGGGAAAAACGC-----------------TGCT...........................................................................................................................................................................................................2511.0010000100
.............................................................................................................................................................GCAGA---CTCACAGAAAA------CGGGAAAAACG.................................................................................................................................................................................................................................2711.0011000000
.............T---TTTAGTCGACGGC--------CTGTT-CTT--TTG-------C......................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAGCGCGAATGGCACCTC....................................2011.0010000010
..............................................................GATATTTATAGCCAG---CGTGT--...........................................................................................................................................................................................................................................................................................................................................2011.0010000010
droYak3
ATCAGT---TTGTT---TTTAGTCGACGGC--------CTGTT-CTT--TTG-------CGAGATATTTATAGCCAG---CGTGT--AA------AAGTTGACGTGGA-AGTAAGG------------------TCTTTC--AGTCAAATAAGCATGGAAGA---TTCAAAGAAAA------CGGGAAAAACGC-----------------TGCTTATTAAAGTAAA-------------------------------------------------ATTAGAGTATAAA-TAACTAAT------TGATGAACAGGATAATAAAGTGCAAT-----------TTCAA----ATA-CCTTCCAGATAAGCGCGAATGGCACATCGCACTTCTACACCCCGG---TGGCCGGATATCC---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................GTGT--AA------AAGTTGACGTGGA-A....................................................................................................................................................................................................................................................................................................................2011.00100010000000
..........................................................................................................................................................................................................................................................................................................................................................................................CATCGCACTTCTACACCCCGG---T...............2211.00101000000000
.........................................................................................................................................TTC--AGTCAAATAAGCATGGAA..................................................................................................................................................................................................................................................................2111.00101000000000
.................................................................................................................................................CAAATAAGCATGGAAGA---TT...........................................................................................................................................................................................................................................................1911.00100000010000
...................................................................................GT--AA------AAGTTGACGTGGA-A....................................................................................................................................................................................................................................................................................................................1811.00101000000000
................................................................................................................................................................GA---TTCAAAGAAAA------CGGGAAAAACGC-----------------TGCT...........................................................................................................................................................................................................2911.00100000010000
..................................................................TTTATAGCCAG---CGTGT--AA------AAGTTGA............................................................................................................................................................................................................................................................................................................................2511.00100000010000
................................................................................................................................................................GA---TTCAAAGAAAA------CGGGAAAAACGC-----------------TGC............................................................................................................................................................................................................2811.00100000010000
...................................................................................................TGACGTGGA-AGTAAGG------------------TCTTTC--A...................................................................................................................................................................................................................................................................................2311.00100000010000
................................................................................................................................................................GA---TTCAAAGAAAA------CGGGAAA.....................................................................................................................................................................................................................................2011.00100000010000
droEug1
ATCAAT---T-------TTTAG---TCGGC--------GTGTCTCTT--TCG-------CGAGATATTTTTAGTCTG---TGTGT--TAA-----ATGCCGACGTGGT-GTTTC----AAAA--A--TATA--ATATTTT--A------AGAAAATGGAAGA---CTCAAAGAAAT------CGAGCAAAACGC-----------------TGCTTATTAAAGTAATTAT------------------------TTT------------CG----------------ATTCACTTTAA------CGTTTAATATGATTAATGAATGAATT-----------TTTAA----T-C-ATTTACAGATAAGCGCGAATGGCACTTCGCATTTCTATACCCCTG---TGGCAGGTTATCC---SizeHit CountTotal NormTotal
No Reads
droBia1
ATCAGC---TTGACTTTTTTAG---TCG-C--------GTGTTTGTT--TCG-------AGAGATATTTTTAGCCAG---CGTGT--AAA-----ATGTTGACGTGGT-ACATTT---AAAT--A--TACACAATAATTATAAATGAAACGGAAATGGAGGA---GGCCAATAAAA------CCGGCAAGAGGC-----------------TGCTTATAAAAGTAATATC------------------------CTAGG-----------G----------------ATTCTTTTAAC-T----TGTTTAACAGGCTAACTAACTGAGAT--------GCTTTT------GTA-TCTTTCAGATAAGCGCGAATGGCACTTCGCATTTCTACACCCCGG---TGGCGGGCTATCC---SizeHit CountTotal NormTotal
No Reads
droTak1
ATCAGT---TCTTT-TTTTTAG---AC------------------------G-------CGAGATATTTTTAGCCAG---CGTGT--TAAATTAAATGTTGACGTGGT-GTTTTT---AGAA--ATATATG--ATCTTTT--AATGAAACCACAATGGAGGA---TCCTAAGAAAA------CGGGCAAAACGC-----------------TGCTTATTAAAGTAATTTT------------------------AACGG-----------G----------------ATATTTTTAAA------TATTTAACTGGGTAATTAAATATAAT-----------TTGTT--GTTTATTTTTACAGATAAGCGCGAATGGCACTTCGCATTTCTATACCCCGG---TGGCTGGTTATCC---SizeHit CountTotal NormTotal
No Reads
droEle1
ATCAGT---TAGTT-TTTTTAG---TCGGC--------GTGGT-TTTGGTGG-------CGAGATATTTTTAGCCAG---CGTGT--TAA-----ATGTTGACGTGGT-ATTTTT---AAAA--A--TATA--TTCTCTC--AATGAAACGGAAATGGAGGT---GCCAAAGAAAT------CGGGAAAAACGT-----------------TGCTTATTAAAGTAATTGC------------------------TTA------------AA----------------ACTTATCCTAA------TGTTTTACAGAATTATTTAATGTAAT-----------TTCAATTGTTTT-TTTTACAGATAAGCGCAAATGGCACTTCGCATTTCTACACCCCAG---TGGCGGGTTATCC---SizeHit CountTotal NormTotal
No Reads
droRho1
ATCAGT---TAGTT--TTTTG---GTCGGC--------GTGTTTCGG--TGG-------CAAGATATTTTTAGCCAG---CGTGT--TAA-----ATGTTGACGTGGT-GTTTT----AAAA--A--TATA--GTCTCTC--AATGAAACGAAAATGGAGGA---GTCAAGGAAAA------CGTCGAATACGC-----------------TGCTTATTAAAGTACTTGC------------------------TTA------------AG----------------ATAAATTTAAA------TGTTTTACAGAATTACTAAATGTATT-----------GTT-A----ATA-TTTTACAGATAAGCGCAAACGGCGCTTCGCATTTCTACACCCAAG---TGGCGGGTTATCC---SizeHit CountTotal NormTotal
No Reads
droFic1
ATCAAT---TT-T---TTTTAG---CCGAC--------GTAT-------TCG-------CGAGATATATTTAGCCAG---CGTGT--TA------AATGTGACGTGGT-GTTTC----AAAT--A--AAT-----GAATG--AATGAAACAACGATGGAGGA---TTCAAAGCAGA------AAGGAAAAACGC-----------------TTCTTATTAAAGTACTTTT-----------GT-----------TTA-----------------------TAGTTTACA-TAGATAAA------CA-TTTACATGGTTATTAAATGTCTT-----------CTTCC----ATG-TATTGCAGATAAGCGCCAATGGCACTTCGCATTTTTACACCCCAG---TGGCGGGATATCC---SizeHit CountTotal NormTotal
No Reads
droKik1
ATCAGT---G---------------TCGGCGTTGTAGTGTGTT-TTTTACGAGCCGCAGACAGATATTTATAGCCAG---CGTGGA-CAA-----AAGTTGACGTGGT-ACTTGTCTTAGAG--A--GA-----TCTTTC--CATG---TGGAAATGGAGGAGCAGCCAGGGAATA------GTG--AAAAGGCAACCAGGACAACCCGAGTGGTTTTTAAAGTACTT----------------------------------------------------AATTGTTAT-TAATTAAATATAAAT-----ATATGATATATTAATACATTTATTTGTTC--CTTTA----C-T-ATTTCCAGATAAGCGCCAATGGCACTTCGCATTTCTACACCCCAG---TGGCAGGTTTTCC---SizeHit CountTotal NormTotal
No Reads
droAna3
ATCAGTAGTTTGAT--TTTCT---GCCAGT--------GTGTT-GTTTCCTA-------GAATATATTTATAGCCAG---CGTGT--CTT-----GAGGCGACGTGGT-ACTTTC---TG-TCCATTTCTC--TTCCATC--TATG---ACAAAATGGAACA---GCCCAAGAAAA------GCGAGCGGACTG-----------------TGCTGATAAAAGTATTGGTTTTTCCTTATAGATTTTAGTTTTTATCGGTTT------------------------------TCTATT------TAC---------TAAACAAGAATACC-----------CTTGA----AT--ATTTGCAGATAAGCGCCAATGGCACATCGCATTTCTATACGCCAG---TGGCGGGTTATCC---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................ATAGCCAG---CGTGT--CTT-----GAG................................................................................................................................................................................................................................................................................................................................1912.002200000
..........................................................................................................GT-ACTTTC---TG-TCCATTTCT................................................................................................................................................................................................................................................................................................1911.001001000
........................................................................................................................................................................................GAGCGGACTG-----------------TGCTGATAAAA....................................................................................................................................................................................................2111.001100000
.........................................................................CCAG---CGTGT--CTT-----GAGGCGAC...........................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
ATCAGTAGTTCGAT-TTTTTT---GCCAGT--------GTGTT-GTTTCCTA-------AAAGATATTTATAGCCAG---CGTGT--CTT-----AAGTCGACGTGGT-ACTTTC---TG-ACCATCTTTC--CACCACT--TATG---ACAGCATGGAACA---GTCCACGAAAA------GCGAGAGAACAG-----------------TGCTAATTAAAGTATTGGTTTTTCCTTATAGATTTTAGTTTTTATCGGTCT------------------------------TCTATT------TAC---------TAACAAACAATTAT--------C--CTCCA----AT--ATTTCCAGATAAGTGCCAATGGCACTTCGCATTTCTACACGCCAG---TGGCGGGCTATCC---SizeHit CountTotal NormTotal
No Reads
dp5
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CTCCACAGATAAGCGCCAATGGTACATCGCATTTCTATACGCCGGCAATGGCCGGCTATCC---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................TGGTACATCGCATTTCTATACGCCG....................2511.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................CGCATTTCTATACGCCGGC..................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................TAAGCGCCAATGGTACATCGC..................................2111.0010100000000
droPer2
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CTCCACAGATAAGCGCCAATGGTACATCGCATTTCTATACGCCGGCCATGGCCGGCTATCC---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................GTACATCGCATTTCTATACGC......................2111.001010000
droWil2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATAAGCGCCAATGGAACATCGCATTTTTATACGCCGG---TGGCTGGCTATCC---SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................CCAATGGAACATCGCATTT..............................1911.00100010
..........................................................................................................................................................................................................................................................................................................................................................................ATAAGCGCCAATGGAACA......................................1811.00100010
droVir3
ATT---------------TTAT---T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC-GCTTTCAGATAAGCAGCAATGGCACATCGCATTTTTATACGCCGC---TGCCTGGCTATCC---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................AGCAATGGCACATCGCATTTT.............................2112.002000000000000000000002000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................AAGCAGCAATGGCACATCGC..................................2011.001000000000001000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTATACGCCGC---TGCCTG..........2111.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................AATGGCACATCGCATTTTTATACGC......................2511.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GTTGGT---TTATT---TATAGT---TG-------------TA-CTT--T---------------------------------------------TCGTTGACGTGGATACTTTT---CGCA--G--TGTC--AGCTAGC--AATGAAGCCGCAA--------------AAGATTAAATCAACAACGACCACGT-----------------CGACAACAACAGAATCTGT------------------------ATT-----TATTTTACAACAAAATTTGACTA----------------------TTCGCAGTTTCATTAA-AGCATT-----------TTGCA--A-CTC-GTTTTCAGATAAGCAGCAATGGTACATCGCATTTCTATACGCCGC---TGCCCGGCTATCCGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................AACAACGACCACGT-----------------CGACAACAACAGAAT................................................................................................................................................................................................2911.001100000
...........................................................................................................................................C--AATGAAGCCGCAA--------------AAGAT....................................................................................................................................................................................................................................................1911.001000001
...............................................................................................................................................ATGAAGCCGCAA--------------AAGATTAAATC..............................................................................................................................................................................................................................................2311.001000001
..........................................A-CTT--T---------------------------------------------TCGTTGACGTGGATA....................................................................................................................................................................................................................................................................................................................2011.001000001
droGri2
GTT--------------TTTAGCCGCTGGC--------CTTTT-TTT--TTG-------TTTGATGTTTTGGGCCACACACGTCAATAA------AAGTCGAC-TGAA-ATTTGATGCACAG--------------ATGC--AGGTGAATGGGCCCAGATGA---TGTGAAGGAC---------------ATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 11:58 PM