ID:

dsi_17164

 Coordinate:

3r:23180862-23181047 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CCCGCATCCCGCAAGAACCGCGTAGCAAACTCAGGATCCAAGCCAAAAACGTTAGTACGTTACTTTAGTTAGTCCCAAATACCTTATAACTTTGAAACCTTTGAGTAGCCGGCTATAGGCTTGAATTGCGTGCTTATTGATGCCAATGGCTGTGAACCACCTTTGCACTTTTCACATTTTATGTACCGAAGCTGAATGCATTTTAATGTTTTCTCCACTGCATGATTCCCCTCCAGCACACAATCGAAGCCCAAGCACATAGACGCCGACGACGAGGATGACAAGA
**************************************************........(((((((......((..((((...........))))..))....)))))))..(((((.(((...(((.........)))...))).)))))((((((..............))))))..(((((((........(((.((((....)))).))).....)))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 M053
female body
 M025
embryo
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR618934
dsim w501 ovaries
 M024
male body
............................................................................................................................................................................................................................................CACACAATCGAAGCCCAAGCACATAGA....................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................CGCGTAGCAAACTCAGGATCCAAGC................................................................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
................ACCGCGTAGCAAACTCAGGATCCAAGC................................................................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......TCCCGCAAGAACCGCGTAGCAAACTCAGG........................................................................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................GCGTAGCAAACTCAGGATCCAAGCCAAA............................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................CACAATCGAAGCCCAAGCACATAGA....................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................CAAGCACATAGACGCCGACGACGAGGAT....... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................GTAGCAAACTCAGGATCCAAGCCAAAAAC............................................................................................................................................................................................................................................ 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................CACATAGACGCCGACGAC............. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................TAGACGCCGACGACGAGGATGACA... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................GCTTAGCAAACTCAGGATCCAAGC................................................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................CATAGACGCCGACGACGAGGATGACAAGA 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................ACACAATCGAAGCCCAAGCACA........................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..............................TCAGGATCCAGGCCAAAA.............................................................................................................................................................................................................................................. 18 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................................................................GCCGACGACCAGGATGAC.... 18 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................ATGTGCCGAAGCTGAAT......................................................................................... 17 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................GCCCAAGCACATAGAA...................... 16 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.........................CACGCTCAGGTTCCAAGCC.................................................................................................................................................................................................................................................. 19 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................GGTTATTGATGCCAAT........................................................................................................................................... 16 1 8 0.13 1 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................CCATGTACCGAAGCTGA........................................................................................... 17 2 12 0.08 1 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................TGGACCCAAGCTGAGTGCA...................................................................................... 19 3 17 0.06 1 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................................TAATGACTTCTCCACTG.................................................................. 17 2 18 0.06 1 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................TATTGATGCCAATGTC........................................................................................................................................ 16 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0
.........................................ACCAAGAACGTTAGTACC................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................................................TACCGAAGCAGAATTC....................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0
....................................................................................................TTGAGGACCCGGCTAT.......................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

GGGCGTAGGGCGTTCTTGGCGCATCGTTTGAGTCCTAGGTTCGGTTTTTGCAATCATGCAATGAAATCAATCAGGGTTTATGGAATATTGAAACTTTGGAAACTCATCGGCCGATATCCGAACTTAACGCACGAATAACTACGGTTACCGACACTTGGTGGAAACGTGAAAAGTGTAAAATACATGGCTTCGACTTACGTAAAATTACAAAAGAGGTGACGTACTAAGGGGAGGTCGTGTGTTAGCTTCGGGTTCGTGTATCTGCGGCTGCTGCTCCTACTGTTCT
**************************************************........(((((((......((..((((...........))))..))....)))))))..(((((.(((...(((.........)))...))).)))))((((((..............))))))..(((((((........(((.((((....)))).))).....)))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
......................................................................................................................................................................................................................................GAGGTCGTGTGCTAGCTT...................................... 18 1 1 1.00 1 0 1 0 0 0
..............................................................ACAATCAATCAGGGTTTATGG........................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 1 0
........................................................................................................................................................ACTTGGTGGCTACGTGAAAA.................................................................................................................. 20 2 1 1.00 1 0 0 1 0 0
..........................................................................................................................................................................TAGTGTAAAATACATGGCTTC............................................................................................... 21 1 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................................TCGTGTGTTAGCTTCG.................................... 16 0 1 1.00 1 1 0 0 0 0
..............................AGCCCTAGGTTCGGTTTCT............................................................................................................................................................................................................................................. 19 2 3 0.33 1 0 1 0 0 0
.......TGGCGTTCTTGGCGC........................................................................................................................................................................................................................................................................ 15 1 5 0.20 1 0 0 0 0 1
........................................................................................................................................................................................................AAAATGACAAAAAAGGCGACGT................................................................ 22 3 8 0.13 1 1 0 0 0 0
...................................................................................................................................................................ACGTGATAAGTGTAAA........................................................................................................... 16 1 10 0.10 1 0 0 1 0 0
.............................................................................................................GCTGATGTCCGAACTT................................................................................................................................................................. 16 2 20 0.10 2 0 0 0 0 2
.....................................................................................................................................................................................................................................................................CTGCGGCTGCCGCTC.......... 15 1 20 0.10 2 2 0 0 0 0
..................................................................................................................................................................................................................................AGGGGATGTCGTGAGTT........................................... 17 2 13 0.08 1 0 0 0 0 1
..............................................................................................................................................................................................................................................GTGTTATCCTCAGGTTCGT............................. 19 3 13 0.08 1 0 0 1 0 0
.........................................................................................................................................................................................................................GACGAACTGAGGGGAG..................................................... 16 2 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:23180812-23181097 - dsi_17164 CC-------CGCATCCCGCAAGAACCGCGTAGCAAACTCAGGATCCAAGCCAAAAACGTTAGTACG--TTAC--------------------------------------------TTTAGTTAGTCCC-----------AAATACCTTATAACTTTGAAACCTTTGAGTA---------------------------------GCCGGCTATAGGCTTGAATTGCGTGCTTAT---T--GATGCCAATGGCTGTGAACCACCTTTGCACTTTTCACATTTTATGT--------------------------------------------------------ACCGAAGCTGAATG-----------------------------------------------------------------------------------------------------------------------------CATTTTAATGTTTTCT-----------------------------------------------CCACTGCATGATTCCCCTCCAGC---------ACACAATCGAAG---CCCAAGCACATAGACGCCGACGACGAGGATGACAAG------A
droSec2 scaffold_22:404173-404458 - CC-------CGCATCCCGCAAGAACCGCGTAGCAAACTCAGGATCCAAGCCAAAAACGTTAGTATG--TTAC--------------------------------------------GTTAGTTAGTCCC-----------AAATACCTTATAACTTTGAAACCTTTGAGGA---------------------------------ACCGGCTATAGGCTTGAATTGCGTGTTTAT---T--GATGCCAATGGCTGTAAACCACCTTTGCACTTTTCACATTTTATGT--------------------------------------------------------ACCGAAGTTGCATG-----------------------------------------------------------------------------------------------------------------------------CATTTTAATGTTTTCT-----------------------------------------------CCACTGCATGATTCCCCTCCAGC---------ACACAATCGAAG---CCCAAGCACATAGACGCCGACGACGAGGATGACAAG------A
dm3 chr3R:23779014-23779272 - CC-------CACATCCCGCAAGATCCGCGTAGCAAACTCAGGATCCAAGCCAAAAGCG-GGGTAGGA--AACCCT-----------------------------------------ATTAATTAGTCCC-----------AAATACT--------------------------------------------------------------CCATAGGCTTGGATTGTGTGGTTTT---T--GATCCCAATAGCTATGAACCACCTTTGCACCTTTCACATTTTATGT--------------------------------------------------------ACCGAAGTTGAATG-----------------------------------------------------------------------------------------------------------------------------CATTTTAATGTTTTCT-----------------------------------------------CCACTGCATGTTTCCCCTCCAGC---------ACACAATCGAAG---CCCAAGCACATTGACGCCGACAACGAGGATGACAAG------A
droEre2 scaffold_4820:4263378-4263629 + CC-------GGC-----------------CAGCAAAATCGGGATTGAAGCCTAAAGCT-GGGTAGGG--AACAT------------------------------------------TTTAGTTATTCCCCTAAGTAGCACAA---------------GAAACCATTTATTT---------------------------------GC---TTATAGACGCAGATTGTGTGCTTATTATT--AATGCCAATAGCTTCAAGCCACCTTTGCACT-TTAACTTTTTATGC--------------------------------------------------------ACAAACGTTGAATG--------------------------------------------------------------------------------CG-------------------------------------------CATTTAAATGTATTCT--------------------------------------------------------------CCCTTAGA---------ACACAATCAAAG---CCCAGGCACATAGACGCCGACAACGAGGACGACAAG------A
droYak3 3R:22718255-22718556 + CC-------CATTCCCAACAAGAGCGTGGTAGCCAACTCGGGATCTAAGCCAAAAGCT-GGGTAGGA--AACCGTGC---------------------------CATTAGGACCCTATAAGTTTGTCCCCTAAGAAACACAAGAACCTCATCATTTTAATACCGTTTATGT---------------------------------GCCGTTTATATACTCAAATTGTATGTCTAT-------ATGTCAATAGCTTTACGCCACCTTTGCACTTTTAACATTTTATGC--------------------------------------------------------ACAGAAGTTGAATG-----------------------------------------------------------------------------------------------------------------------------CATTTAAATGTATTCT-----------------------------------------------CCA---------TTCCCCTTAGA---------ACGCAATCAAAA---CCCAGGCACATAGACGCTGACGACGAAGATGATAAG------A
droEug1 scf7180000409787:1828017-1828320 + AT-------CACTTCCAACAAAAGCGGAGTAACCAGCTTGGATTCCAAGCCAAAATCT-GGGTAGAC--CTCTTTAAAATTTAAATGTAGTCAGCTAGTTTTAACATTTTAATCTT--TATTT---------------------------------TGCAGGGATTTAGGG---------------------------------A---------------------------------------------------------------------------TTTTATATGTAGTACCTTAA------TGTCCACCGTTTATATGATAGGAATTATATTTTTAAGTCGTTTAGATACTTA---------------------------GC--TTAATCTTGA----------------CATATTTTCCATTATTTATCATACAATT-------------------------------------------------TTATT-----------------------------------------------TTA---------TTTTCTTTAGC---------TTAAAAGCAAAG---CCCAAACACATCGATGCCGATGATGATGATAACA---------
droBia1 scf7180000302075:3036665-3037092 + CCGCAACAGCAATTCTAGCAAGGGCAAAGAAGCCAGCTTGGCATCCAAGCTAAAAGCG-GGGTAGGA--AACCCTTT---------------------------AGAGAACATTCCTTTAGTTAGTAACCTATGTAATCTTGATGTTTCGTATCTTTAGAAC--------GATTAGCAAGTCACAGCTAGAGACATCTAGAGTCTTCTGCTATA--------TA--------GT---TTACAA---------------GTATTTTTAAGGCTTTCATTGCTTTTGTATGTAGCCATCTAGCTTTAGTGCC----------------------------------------------------------------------------TTTTTAAATATTG----------------ACAATGATTAAG---------------TTGCCT------ATGCTACTTTATTTAGCCAGAATTACACTCTGTAAATTCTGGGAAAGTAATCCCGATTTCTGATATCTGATTATCCTGTATGTCTCAAACATA---------TTCCCTTTAGA---------GCCACCTCAAAG---CCCAAGCACATAGACGCCGACGACGACGAAGATGATGGTGATA
droTak1 scf7180000415177:114235-114303 - TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTAGA---------GCACAATCAAAGCAACCCAAGCATATTGATGCCGACGACGATGATGAAGATGATGATA
droEle1 scf7180000491280:4251821-4251865 + C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATCAAAG---CCCAAGCACATAGATGCCGACGACGACAGTGATT---------
droRho1 scf7180000779538:500440-500489 + GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCAATCGAAG---CCCAAGCACATAGATGCCGACGACGACGATGACTT-------A
droFic1 scf7180000453826:156818-157144 + C----------------GCAAGGGAAAAACAGTCACTTCGGGAATCAAGCCAAAAGCT-AGGTAGGA--TACCCCT--------------------------AGCAATATATCCTTGTACTTT---------------------------------TGTAGACCTTAAACA---------------------------------AC----------TTTATATTGCTTATTTGT---TTTCAATTTGAGAACCATAACTTATTTTTATGATTTGCATTACTTTTGT------------------------------------------------------AATCCAATAAGGAATACACATAATTTGCAATTTTTAAGTTATTTTACTTGTAATCATTG----------------TAAATGACCCAGCA--TAACTAACAATTTAAAA------AAAATTCTTTAGTCAGCCTGA----------------------------------------------------------------------------------------------AAAACTCGTACAATCCAAA---CCCAAGCACATAGATGCCGACGACGAAGAAGACAA--------
droKik1 scf7180000302475:1041991-1042041 + C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATCTAAACAACCGAAACACATTGATGCCGACGATGAAGACGATGAT------G
droAna3 scaffold_13340:21913369-21913587 - TC-------CACAGT----------------------TCAAAGCACACGGCAAAGACT-CGGTAAGT------------------------------------------------------------CT-----------AAATACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------GC--TTGGTTTGGATCGTAAGAGATTAATAAATAATTTCCACCCATTATCGCATAATTGGAATTCAAATTAA-----------TA-----ACAATACGCTTTAAATTTTGTT-----------------------------------------------CAA---------TTTCTTTAAGAGCAAAACCTACACAGTCGAGA---CCTAAACACATAGACGCCGACGACGACGACGATGATAATGAT-
droBip1 scf7180000396583:292342-292552 + TAGC-----AACAGA--CCAAGGTCA-----------------------GCAAAGACT-CGGTAAGTCTTGC--------------------------------------------GCAAGTTGGATCG-----------AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAACTATTGAAGAATAATCAAGCACTATAGCATAGTTGTAATTTAAATGAA-----------TG-----CCAATACGTTAAAAATTTTATT---GAA-------------------------------------AACCCAA---------TTTCTTTTAGTGTCAATGCAAAACGGTCGAGA---CCTAAACACATCGATGCCGACGACGACGAGGATGAA-------
droWil2 scf2_1100000004921:979261-979293 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAAG---CCCACACGAGTAGCTGGTGGCACAGAA----------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CC-------CGCATCCCGCAAGAACCGCGTAGCAAACTCAGGATCCAAGCCAAAAACGTTAGTACG--TTAC--------------------------------------------TTTAGTTAGTCCC-----------AAATACCTTATAACTTTGAAACCTTTGAGTA---------------------------------GCCGGCTATAGGCTTGAATTGCGTGCTTAT---T--GATGCCAATGGCTGTGAACCACCTTTGCACTTTTCACATTTTATGT--------------------------------------------------------ACCGAAGCTGAATG-----------------------------------------------------------------------------------------------------------------------------CATTTTAATGTTTTCT-----------------------------------------------CCACTGCATGATTCCCCTCCAGC---------ACACAATCGAAG---CCCAAGCACATAGACGCCGACGACGAGGATGACAAG------ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------ACACAATCGAAG---CCCAAGCACATAGA.............................2712.00200000002000000000
.........................CGCGTAGCAAACTCAGGATCCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000002000000000
.......................ACCGCGTAGCAAACTCAGGATCCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000002000000000
.............TCCCGCAAGAACCGCGTAGCAAACTCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
..........................GCGTAGCAAACTCAGGATCCAAGCCAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAATCGAAG---CCCAAGCACATAGA.............................2511.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCACATAGACGCCGACGACGAGGAT.............2811.00100000001000000000
............................GTAGCAAACTCAGGATCCAAGCCAAAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATAGACGCCGACGAC...................1811.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACGCCGACGACGAGGATGACA.........2411.00100000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAGACGCCGACGACGAGGATGACAAG------A2911.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAATCGAAG---CCCAAGCACA.................................2211.00100001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CCCAAGCACATAGAA............................1640.25100000001000000000
droSec2
CC-------CGCATCCCGCAAGAACCGCGTAGCAAACTCAGGATCCAAGCCAAAAACGTTAGTATG--TTAC--------------------------------------------GTTAGTTAGTCCC-----------AAATACCTTATAACTTTGAAACCTTTGAGGA---------------------------------ACCGGCTATAGGCTTGAATTGCGTGTTTAT---T--GATGCCAATGGCTGTAAACCACCTTTGCACTTTTCACATTTTATGT--------------------------------------------------------ACCGAAGTTGCATG-----------------------------------------------------------------------------------------------------------------------------CATTTTAATGTTTTCT-----------------------------------------------CCACTGCATGATTCCCCTCCAGC---------ACACAATCGAAG---CCCAAGCACATAGACGCCGACGACGAGGATGACAAG------ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................GA---------------------------------ACCGGCTATAGGCTTGAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
dm3
CC-------CACATCCCGCAAGATCCGCGTAGCAAACTCAGGATCCAAGCCAAAAGCG-GGGTAGGA--AACCCT-----------------------------------------ATTAATTAGTCCC-----------AAATACT--------------------------------------------------------------CCATAGGCTTGGATTGTGTGGTTTT---T--GATCCCAATAGCTATGAACCACCTTTGCACCTTTCACATTTTATGT--------------------------------------------------------ACCGAAGTTGAATG-----------------------------------------------------------------------------------------------------------------------------CATTTTAATGTTTTCT-----------------------------------------------CCACTGCATGTTTCCCCTCCAGC---------ACACAATCGAAG---CCCAAGCACATTGACGCCGACAACGAGGATGACAAG------ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................TT---T--GATCCCAATAGCTATGAAA.......................................................................................................................................................................................................................................................................................................................................................................................22112.001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGCCGACAACGAGGATGAC..........2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TTTTATGT--------------------------------------------------------ACCGAAGTTGAATG-----------------------------------------------------------------------------------------------------------------------------CA.......................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CAGGATCCAAGCCAAAAGCG-GGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TCAGGATCCAAGCCAAAAGCG-GGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................AGCAAACTCAGGATCCAAGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ACTCAGGATCCAAGCCAAAAGCG-GGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGCCGACAACGAGGAT.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------ACACAATCGAAG---CCCAAGCACAT................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................TCAGGATCCAAGCCAAAAGCG-GG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................ACTCAGGATCCAAGCCAAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATTGACGCCGACAACGAGGATGA...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------ACACAATCGAAG---CCCAAGCACATTGA.............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACGCCGACAACGAGGATGAC..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CTCAGGATCCAAGCCAAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CAGGATCCAAGCCAAAAGCG-GGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GATCCGCGTAGCAAACTCAGGATCCAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATTGACGCCGACAACGAGGATGAC..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CAAGATCCGCGTAGCAAACTCAGGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................GCAAACTCAGGATCCAAGCCAAAAGCG-GG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------------------------CCACTGCATGTTTCCCCTCCAG....................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TTTATGT--------------------------------------------------------ACCGAAGTTGAATG-----------------------------------------------------------------------------------------------------------------------------.........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CGCGTAGCAAACTCAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AACTCAGGATCCAAGCCAAAAGCG-GG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TCACATTTTATGT--------------------------------------------------------ACCGAAGT............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CGCGTAGCAAACTCAGGATCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGACGCCGACAACGAGGA..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AGCAAACTCAGGATCCAAGCCAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................TCAGGATCCAAGCCAAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT-----------------------------------------------CCACTGCATGTTTCCCCTCCA.....................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAAG---CCCAAGCACATTGACGCCGAC......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AGGATCCAAGCCAAAAGCG-GGGTAGGA--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................TAGGCTTGGATTGTGTGGTTT.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CGCAAGATCCGCGTAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCGAAG---CCCAAGCACATTGACGCC.........................2711.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CATAGGCTTGGATTGTGTGG....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTAATGTTTTCT-----------------------------------------------CCACTGC...................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAG---CCCAAGCACATTGACGCCGACAACGAG................3311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGACGCCGACAACGAGGATGAC..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CAAACTCAGGATCCAAGCCAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CACATCCCGCAAGATCCGCGTAGCAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......................ATCCGCGTAGCAAACTCAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CC-------GGC-----------------CAGCAAAATCGGGATTGAAGCCTAAAGCT-GGGTAGGG--AACAT------------------------------------------TTTAGTTATTCCCCTAAGTAGCACAA---------------GAAACCATTTATTT---------------------------------GC---TTATAGACGCAGATTGTGTGCTTATTATT--AATGCCAATAGCTTCAAGCCACCTTTGCACT-TTAACTTTTTATGC--------------------------------------------------------ACAAACGTTGAATG--------------------------------------------------------------------------------CG-------------------------------------------CATTTAAATGTATTCT--------------------------------------------------------------CCCTTAGA---------ACACAATCAAAG---CCCAGGCACATAGACGCCGACAACGAGGACGACAAG------ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
CC-------CATTCCCAACAAGAGCGTGGTAGCCAACTCGGGATCTAAGCCAAAAGCT-GGGTAGGA--AACCGTGC---------------------------CATTAGGACCCTATAAGTTTGTCCCCTAAGAAACACAAGAACCTCATCATTTTAATACCGTTTATGT---------------------------------GCCGTTTATATACTCAAATTGTATGTCTAT-------ATGTCAATAGCTTTACGCCACCTTTGCACTTTTAACATTTTATGC--------------------------------------------------------ACAGAAGTTGAATG-----------------------------------------------------------------------------------------------------------------------------CATTTAAATGTATTCT-----------------------------------------------CCA---------TTCCCCTTAGA---------ACGCAATCAAAA---CCCAGGCACATAGACGCTGACGACGAAGATGATAAG------ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........ATTCCCAACAAGAGCGTGGTAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCTGACGACGAAGATG............1911.00101000000000
droEug1
AT-------CACTTCCAACAAAAGCGGAGTAACCAGCTTGGATTCCAAGCCAAAATCT-GGGTAGAC--CTCTTTAAAATTTAAATGTAGTCAGCTAGTTTTAACATTTTAATCTT--TATTT---------------------------------TGCAGGGATTTAGGG---------------------------------A---------------------------------------------------------------------------TTTTATATGTAGTACCTTAA------TGTCCACCGTTTATATGATAGGAATTATATTTTTAAGTCGTTTAGATACTTA---------------------------GC--TTAATCTTGA----------------CATATTTTCCATTATTTATCATACAATT-------------------------------------------------TTATT-----------------------------------------------TTA---------TTTTCTTTAGC---------TTAAAAGCAAAG---CCCAAACACATCGATGCCGATGATGATGATAACA---------SizeHit CountTotal NormTotal
No Reads
droBia1
CCGCAACAGCAATTCTAGCAAGGGCAAAGAAGCCAGCTTGGCATCCAAGCTAAAAGCG-GGGTAGGA--AACCCTTT---------------------------AGAGAACATTCCTTTAGTTAGTAACCTATGTAATCTTGATGTTTCGTATCTTTAGAAC--------GATTAGCAAGTCACAGCTAGAGACATCTAGAGTCTTCTGCTATA--------TA--------GT---TTACAA---------------GTATTTTTAAGGCTTTCATTGCTTTTGTATGTAGCCATCTAGCTTTAGTGCC----------------------------------------------------------------------------TTTTTAAATATTG----------------ACAATGATTAAG---------------TTGCCT------ATGCTACTTTATTTAGCCAGAATTACACTCTGTAAATTCTGGGAAAGTAATCCCGATTTCTGATATCTGATTATCCTGTATGTCTCAAACATA---------TTCCCTTTAGA---------GCCACCTCAAAG---CCCAAGCACATAGACGCCGACGACGACGAAGATGATGGTGATASizeHit CountTotal NormTotal
No Reads
droTak1
TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTAGA---------GCACAATCAAAGCAACCCAAGCATATTGATGCCGACGACGATGATGAAGATGATGATASizeHit CountTotal NormTotal
No Reads
droEle1
C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATCAAAG---CCCAAGCACATAGATGCCGACGACGACAGTGATT---------SizeHit CountTotal NormTotal
No Reads
droRho1
GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCAATCGAAG---CCCAAGCACATAGATGCCGACGACGACGATGACTT-------ASizeHit CountTotal NormTotal
No Reads
droFic1
C----------------GCAAGGGAAAAACAGTCACTTCGGGAATCAAGCCAAAAGCT-AGGTAGGA--TACCCCT--------------------------AGCAATATATCCTTGTACTTT---------------------------------TGTAGACCTTAAACA---------------------------------AC----------TTTATATTGCTTATTTGT---TTTCAATTTGAGAACCATAACTTATTTTTATGATTTGCATTACTTTTGT------------------------------------------------------AATCCAATAAGGAATACACATAATTTGCAATTTTTAAGTTATTTTACTTGTAATCATTG----------------TAAATGACCCAGCA--TAACTAACAATTTAAAA------AAAATTCTTTAGTCAGCCTGA----------------------------------------------------------------------------------------------AAAACTCGTACAATCCAAA---CCCAAGCACATAGATGCCGACGACGAAGAAGACAA--------SizeHit CountTotal NormTotal
No Reads
droKik1
C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATCTAAACAACCGAAACACATTGATGCCGACGATGAAGACGATGAT------GSizeHit CountTotal NormTotal
No Reads
droAna3
TC-------CACAGT----------------------TCAAAGCACACGGCAAAGACT-CGGTAAGT------------------------------------------------------------CT-----------AAATACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------GC--TTGGTTTGGATCGTAAGAGATTAATAAATAATTTCCACCCATTATCGCATAATTGGAATTCAAATTAA-----------TA-----ACAATACGCTTTAAATTTTGTT-----------------------------------------------CAA---------TTTCTTTAAGAGCAAAACCTACACAGTCGAGA---CCTAAACACATAGACGCCGACGACGACGACGATGATAATGAT-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TAGC-----AACAGA--CCAAGGTCA-----------------------GCAAAGACT-CGGTAAGTCTTGC--------------------------------------------GCAAGTTGGATCG-----------AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAACTATTGAAGAATAATCAAGCACTATAGCATAGTTGTAATTTAAATGAA-----------TG-----CCAATACGTTAAAAATTTTATT---GAA-------------------------------------AACCCAA---------TTTCTTTTAGTGTCAATGCAAAACGGTCGAGA---CCTAAACACATCGATGCCGACGACGACGAGGATGAA-------SizeHit CountTotal NormTotal
No Reads
droWil2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAAG---CCCACACGAGTAGCTGGTGGCACAGAA----------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads

Generated: 05/18/2015 at 10:40 PM