ID:

dsi_17147

 Coordinate:

x:84362-84618 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [x_84619_85682_+]; CDS [x_84619_84811_+]; exon [x_83988_84361_+]; CDS [x_83988_84361_+]; intron [x_84362_84618_+]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAGATCGCCTTTTTTTCCTGCCGTGACATCGATGCCGGAGAGGAAATATGGTAAGTCGATCCAACGATTTTAAAGCAAAGAGATAGATAGTCAAACGAGAATTATTTTACAATAAATTTTTAAAGACCAAAATTTTAAGCCATTGCTTCCTTTTTTATTGTAATGTTTCTACTAAAATATAATAATTATTCGTTGAATAGTAGGTAAAATCGAAAGGATTCGTTTTCGGTCCTTTAAAACATTATTGATCAGAATTAAGGGTTCGAAATTGTTGTTGACTTTATTTACTCTTTGTTGTTTCCTTTAGCTTTGACTACGGAGAAAAATTCTGGCGCGTGGAACATCGCTCCTGTGTGG
**************************************************..((((((......))))))...(((((((((.(((((((((((.(((.((((......((((((..((((((((((((((((.......((((((.............))))))..(((((((.......................)))))))...((((.....)))).))))).))).))))))))..)))))).((.(((((...))))))))))).)))))))))..))))))))))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
............................................................................................................................................................................................................................................................AATTAAGCGTTCGAAACTGTT.................................................................................... 21 2 2 1.50 3 0 3 0 0 0 0 0
...ATCGCCTTTTTTTCCTGCCGTGACATCGA..................................................................................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0
.................CTGCCGTGACATCGATGCCGGAGAGGA......................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................................................................................................................................TCTGGCGCGTGGAACATCGCTCC....... 23 0 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................TAACAATAAATCTTTAAAGACTA.................................................................................................................................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................TACTTTAGCTTTGATTACGAAGA................................... 23 3 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................TTTGACTACGGAGAAAAATTCTGGC........................ 25 0 1 1.00 1 0 0 1 0 0 0 0
..............................................................AAGGATTTTAAAGCAAAGAATTA................................................................................................................................................................................................................................................................................ 23 3 1 1.00 1 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................................................................................................TGCTTTGACTACGGAGAAAAATTC............................ 24 1 1 1.00 1 0 0 0 1 0 0 0
.......................TGACATCGATGCCGGAGAGGAAATA..................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
............................TCGATTCCGGAGAGGACA....................................................................................................................................................................................................................................................................................................................... 18 2 5 0.40 2 0 0 0 2 0 0 0
......................................................................................ATATTCAAACGAGAA................................................................................................................................................................................................................................................................ 15 1 20 0.35 7 2 0 0 0 5 0 0
..........................................................................................................................................................TTATTGTAATGTTTCTTCCAGAA.................................................................................................................................................................................... 23 3 4 0.25 1 0 0 0 0 1 0 0
...................................................................................................................................................................................................................................................................GGTTAGAAAGTGATGTTGAC.............................................................................. 20 3 5 0.20 1 0 1 0 0 0 0 0
..............................................................................................................AATAAATTTTTAAAGCCGAAAAA................................................................................................................................................................................................................................ 23 3 8 0.13 1 0 0 1 0 0 0 0
....................CCGTGACATCGCTGC.................................................................................................................................................................................................................................................................................................................................. 15 1 10 0.10 1 0 0 0 0 1 0 0
.............................CGATTCCGGAGAGGAA........................................................................................................................................................................................................................................................................................................................ 16 1 14 0.07 1 0 0 0 1 0 0 0
...........................ATCGATTCCGGAGAGG.......................................................................................................................................................................................................................................................................................................................... 16 1 15 0.07 1 0 0 0 1 0 0 0
........................AACATCGATGCCGGA.............................................................................................................................................................................................................................................................................................................................. 15 1 15 0.07 1 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................................TGATATTATTTACTCATTGTT............................................................. 21 3 16 0.06 1 0 0 0 0 0 0 1
.............................CGATTCCGGAGAGGACA....................................................................................................................................................................................................................................................................................................................... 17 2 16 0.06 1 0 0 0 1 0 0 0
...................................................TAAGTCGATTCCACGGTTT............................................................................................................................................................................................................................................................................................... 19 3 17 0.06 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................TTGACGACGTAGAAAAA............................... 17 2 20 0.05 1 0 0 0 0 1 0 0
.....................................................................................................................................................................................ATCATTAATCGTTGAATACT............................................................................................................................................................ 20 3 20 0.05 1 0 1 0 0 0 0 0
............................TCAATTCCGGAGAGGAA........................................................................................................................................................................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................TTTCGGTTCTTTAAAAAA.................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................TGTTGACTTTTTTTA...................................................................... 15 1 20 0.05 1 0 0 0 0 0 1 0
..............................GATTCCGGAGAGGAAAA...................................................................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 1 0 0 0

Anti-sense strand reads

TTCTAGCGGAAAAAAAGGACGGCACTGTAGCTACGGCCTCTCCTTTATACCATTCAGCTAGGTTGCTAAAATTTCGTTTCTCTATCTATCAGTTTGCTCTTAATAAAATGTTATTTAAAAATTTCTGGTTTTAAAATTCGGTAACGAAGGAAAAAATAACATTACAAAGATGATTTTATATTATTAATAAGCAACTTATCATCCATTTTAGCTTTCCTAAGCAAAAGCCAGGAAATTTTGTAATAACTAGTCTTAATTCCCAAGCTTTAACAACAACTGAAATAAATGAGAAACAACAAAGGAAATCGAAACTGATGCCTCTTTTTAAGACCGCGCACCTTGTAGCGAGGACACACC
**************************************************..((((((......))))))...(((((((((.(((((((((((.(((.((((......((((((..((((((((((((((((.......((((((.............))))))..(((((((.......................)))))))...((((.....)))).))))).))).))))))))..)))))).((.(((((...))))))))))).)))))))))..))))))))))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
...................................................................................................................................................................................................................................CTAGGAAATTTGGTAATA................................................................................................................ 18 2 6 2.17 13 7 4 0 0 0 0 2 0 0
.....................................................................................................................................................................................................................................AGGAAATTTGGTAATA................................................................................................................ 16 1 2 0.50 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................AAAAATACGATTACAAAGATGAT....................................................................................................................................................................................... 23 2 2 0.50 1 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................CGAAACTGCGGCCCCTTTTTA.............................. 21 3 3 0.33 1 0 0 0 0 0 1 0 0 0
..................................................................................................................................TTAAAATTCGGTAACG................................................................................................................................................................................................................... 16 0 3 0.33 1 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................................CCTAGGAAATTTGGTAATA................................................................................................................ 19 3 20 0.30 6 2 3 0 0 0 0 0 0 1
................................................................................................................................................................................................................................................................................................AGAAACAAGAAACGAAGTCGAA............................................... 22 3 4 0.25 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................CAGAAGCCAGGAAATGT....................................................................................................................... 17 2 5 0.20 1 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................AAGCGACCTATCATCCAT....................................................................................................................................................... 18 2 6 0.17 1 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................AAGCGACCTATCATCC......................................................................................................................................................... 16 2 20 0.15 3 0 0 0 3 0 0 0 0 0
...................................................................................................................................................................................................................................CTAGGAAATTTGGTAATAC............................................................................................................... 19 3 20 0.15 3 0 3 0 0 0 0 0 0 0
.............................................................................................................................................................................................AGCGACCTATCATCCAT....................................................................................................................................................... 17 2 7 0.14 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................TCGGCAACGCAGGAAAAA.......................................................................................................................................................................................................... 18 2 15 0.13 2 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGCGAAAGCCTGGCAATT........................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0
...........AAAAAGGAAGCCACTGT......................................................................................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................ACCGCGCTCCTAGTAGCC.......... 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................AGCGACCTATCATCCA........................................................................................................................................................ 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0
.....................................................TCAGCTCGGTTACTAAA............................................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:84312-84668 + dsi_17147 AAGATCGCCTTTTTTTCCTGCCGTGACATCGATGCCGGAGAGGAAATATGGTAAGTCG------------------A-----------------TC-----------------------------------------------------------------------------------------------------------------------------------------------CAACGATT----------------------T---TAAAGCA---------------------------------------------------------------------AAGAGA-TAGATAGTCAAACGAGAATTATTTTACAATAAATTTTTAAAGAC--------------CAAAATTT----TAAGCCATTGCTTCCTTTTTT--ATTGTAATGTTTCTACTA-AAAT-----ATAATAATTATTCGTTGAATAGTAGGTAAAATCGAAAGGAT--TCGTTTTCGGTCCTTTAAAACATTATTGATCAGAATTAAGGGTTCGAAATTGTTGTTGACTTTATTT-----------------------------------------------------------------------------------------------------------------------------ACTCT----------TTG---TTGTT-TCCTTTAGCTTTGACTACGGAGAAAAATTCTGGCGCGTGG-A-ACATCGCTCCTGT------------G-TGG
droSec2 scaffold_10:18551-18908 + AAGATCGCCTTTTTTTCCTGCCGTGACATCGATGCCGGAGAGGAAATATGGTAAGTCG------------------A-----------------TC-----------------------------------------------------------------------------------------------------------------------------------------------CAACGATT----------------------T---TAAAGCA---------------------------------------------------------------------AAGAGA-TAGATAGTCAAACGAGAATTATTTTACAATAAATTTTTAAAGAC--------------CAAAATTT----TAAGCCATTGCTTCCTTTTTT--ATTGTAATATTTCTACTA-AAAT-----ATAATAATTATTCGTTGAATAGTAGGTAAAGTCGAAAGGAC--TCGTTTTCGGTCCTTTAAAACATTATTGATCAGAATTAAGGGTTCGAAATTGTTGTTGACTTTATTT-----------------------------------------------------------------------------------------------------------------------------ACTCT----------TTG---TTGTT-TCTTTTAGCTTTGACTACGGAGAAAAATTCTGGCGCGTGG-AAACATCGCTCCTGT------------G-TGG
dm3 chrX:146787-147151 + AAGATCGCCTTTTTTTCCTGCCGTGACATCGATGCCGGAGAGGAAATATGGTAAGTCG------------------A-----------------CC-----------------------------------------------------------------------------------------------------------------------------------------------CAACCATT----------------------T---GAAAGCA---------------------------------------------------------------------AAGAGA-TAGATAGACAAACGATAATTATTTTACAGTACATTTTTAAAGACATAAGG---AACCAC--------AAATAAGCATTTGCTTCTTTTTT--AATTGTTATGTTTCTGCTA-AAATATA-----A---ATATTCGTTGCATAGTAGGTAAAATTGAAAGGAT--TCGTT---------------------TGATCAGAATTAAGGGTTGGAAATTTTTGTTGACCCTATTT--------AGATTGATCACTCAACGTGAAA----------------------------------------ATC----------------------------------------------------ACTCT----------TTG---TTGTT-TCCTTTAGCTTTGACTACGGAGAAAAATTCTGGCGCGTGG-A-ACATCGCTCCTGT------------G-TTG
droEre2 scaffold_4644:87721-87994 + AAGATAGCCTTTTTTGCCTGCCGCGACATCGATGCCGGAGAGGAGATATGGTAAGTCG------------------A-----------------TC-----------------------------------------------------------------------------------------------------------------------------------------------CAACGATT----------------------T---TAAGGTT---------------------------------------------------------------------AACAGGTTAGATAGTCGAA-AATAAATATTTTAAAATGAATT-TTAAAGACAAAAAA---AAACA-------TTAAATGAGCCATTGTTTCTTTTTT-TAATTGTTATATTTTTGCTT-AAGTAAA-----A---TGACTCTTTGAGGAGTATGTAAAATAGAAAAAAT--GCGTTTTAGACCCTTTAAAACATTTTTGATCAGAATTAGGAGTTTCAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 X:86675-87101 + AAGATTGCCTTTTTTGCCTGCCGCGACATCGATGCCGGAGAGGAGATATGGTAAGTTG------------------A-----------------TT-----------------------------------------------------------------------------------------------------------------------------------------------CAACGATA----------------------T---TAGAGTA---------------------------------------------------------------------AACATGTTAGATAGTCAATCGATAAATATTTTAAGGTTAAGT-ATAAAGACATAAAACCGAAACA-------TTAAATAAGCCATTTCTTCTTTTTTTTAATTATGATGC---TGTTA-AAATAAAATGTAATAA-AAGACTTTGAATAGTATGTAAAATCAAAAAAAG--GCATTTTCGAGCCTTTAAAAATTTTTTGACTATGATTAGGG-TTCTTG----T------------A-TGGTTATTCAATTGGTAACTCAACGTTTAATTGTAGCTATATAATTTCCAAAGCTTCTGTGGGTTTCTCTATT----------------------------------------------------ACTCT----------TTG---TTGTTTCTTCTTAGCTTTGACTACGGAGAAAAATTCTGGCGCGTGG-A-ACATCGCTCCTGT------------G-TGG
droEug1 scf7180000409277:452706-453023 + AAGATAGCATTCTTCGCCTGCCGCGATATCGATGCCGGCGAGGAGATATGGTAAGTCT------------------A-----------------TT--------------------------------------------------------------------------------------------------------------TTGGATTATTTTATTTGGTTGTTCT--------CAACTTAT----------------------TGTGAAAAGCA---------------------------------------------------------------------AAAAAA---AGTAGAGAATCTATGAAGGTGTTAGA----------AAAGTT--------------CAAAAACT----TA-------------------------------------TT-AAAT-----GAAATTGTTAACTATCGGATCATA--TAGAAACATAGGAACTTTCATATATATTCTCTAGAAATGTCCCTACCTTGA-------------------------------AT-----------------------------------------------------------------------------------------------------------------------------ACCCTTGGATATTTTTAT---TTGCTTCGTTTTAGTTACGACTACGGGGAGAAGTTTTGGCGCGTAG-A-ACACCGGTCCAGT------------G-TGG
droBia1 scf7180000301760:1088406-1088519 + AAGATAGCCTTCTTCGCGTGCCGCGACATCGATGCCGGGGAGGAGATATGGTGAGTGG------------------A-----------------TC-----------------------------------------------------------------------------------------------------------------------------------------------CAAGGATGAGG--------CTAAAACTCATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTGCT-AGAAAACAGCTTGTCAAC------------TGTGA
droTak1 scf7180000415179:76269-76342 + TTATTTTCATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTTCCTTTCAGCTACGACTACGGCGAGAAGTTCTGGCGCGTGG-A-GCACCGCTCCAGT------------G-TGG
droEle1 scf7180000491011:1126601-1126657 + AAGATCGCCTTCTTCGCCTGCCGCGACATCGATGCCGGCGAGGAGATATGGTAAGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779506:911802-912076 + AAGATCGCCTTCTTCGCCTGCCGCGACATCGACGCCGGCGAAGAGATCTGGTAAGTCC------------------------------------------------------------------------------------------------------------------------------------------------TGAATTGAATCATGTTATGAAGT------AAAGGATTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG-------TATATAGATGCAATGTATTCGTATT-TATCAGTTACATTTTCTATCCAATTAAA-----A---AC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGCTTTTTGTAATGTGTTCTTATCTTTTTTAAAAGTTAACACCAAATTATGTTTTTCT----------AAT---TTGTTTCCTTTCAGCTACGACTACGGGGAGAAGTTCTGGCGCGTGG-A-GCACCGCTCTAGT------------G-TGG
droFic1 scf7180000453927:562133-562556 + AAAATCGCGTTTTTCGCCTGCCGCGACATTGATGCCGGCGAGGAGATCTGGTAAGTTTGAAAATAACTATCAAGTGAGTCACTTACTAAGTAAACCAAAAATGCTAAATATTAGTTAAACAAATGATTAAATTGTACAAAATCCCAAAATTTGTACAACTTTGTTGGTATAGGCGTTAATTACTAATTACTATTGGTGATCCGGAACTGA--------------------------------------GGAATTTTTA-----------TATGATACGCAGACATTGGCATATTAATTAAGAAATTATTGATATAATTGGCAATCATTTTTTGTTTTGAGGAACCAATTAAGAAG---TCTAGGG------------------------------------------------------------------------------------------------------------------------GAATAATGAAGATGTAGGAATAATTGCCATTCC--GATTTGTTGACC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT---TCG-TTCCTTTTAGCTACGACTACGGGGAGAAGTTTTGGCGCGTGG-A-CCGCCGCTCCAGT------------G-TGG
droKik1 scf7180000302610:369154-369265 + AAGATTGCATTCTTTGCATGCCGCGACATTGATGCCGGCGAGGAGATATGGTATGTGAAAAAGTCAAGTTATAGTGATTCAATTTTTAAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTTAATTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CAG
droAna3 scaffold_12929:1685532-1685588 - AAGATAGCATTCTTCGCCTGCCGCGACATCGACGCCGGCGAGGAGATCTGGTAAGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396543:150996-151083 - ATTATAGTTTACATCCTTTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTC---TAA-TCCCCACCAGCTATGATTATGGAGAGAAGTTCTGGCGTGCCG-A-GCATCGCTCCAAT------------A-TGG
dp5 XL_group1a:550273-550372 + AATTGTGCCTGCCTCTCTCT-----ACATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT----------AAGTTCTGCTTTTTTCACAGCTACGACTACGGAGAAAAGTTCTGGCGCACAG-A-ACATCGCTCCGCA------------C-TTG
droPer2 scaffold_26:159785-159884 + AATTGTGCCTGCCTCTCTCT-----ACATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT----------AAGTTCTGCTTTTTTCACAGCTACGACTACGGAGAAAAGTTCTGGCGGACAG-A-ACATCGCTCCGCA------------C-TTG
droWil2 scf2_1100000004909:9938684-9938738 - AAAATTGCATTTTTTGCCTGTCGCGACATCGATTCGGGCGAGGAAATCTGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12928:6292577-6292645 - TT-------TTTTTTGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCACTAGCTACGATTATGGAGAAAAATTCTGGCGTGCCG-A-TCAACGTATCAGC------------G-GAG
droMoj3 scaffold_6359:4501730-4501832 - GCTTTTCACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTATTCACATTTTCGTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTAATTAGCTACGATTATGGCGAGAAGTTCTGGCGCGCTG-A-ACAGCGCAGCAGTCAGCGTGGCGGCG-CCG
droGri2 scaffold_14853:5109245-5109337 - TTAAGTAGTTCAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCATT------------------------------------------------------------------------------------------------------------------------------------------------------AACTACAATTACATTTACAGCTATGATTATGGCGAAAAGTTTTGGCGCTCCG-A-ACAACGTTCCAGC------------G-GCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGATCGCCTTTTTTTCCTGCCGTGACATCGATGCCGGAGAGGAAATATGGTAAGTCG------------------A-----------------TC-----------------------------------------------------------------------------------------------------------------------------------------------CAACGATT----------------------T---TAAAGCA---------------------------------------------------------------------AAGAGA-TAGATAGTCAAACGAGAATTATTTTACAATAAATTTTTAAAGAC--------------CAAAATTT----TAAGCCATTGCTTCCTTTTTT--ATTGTAATGTTTCTACTA-AAAT-----ATAATAATTATTCGTTGAATAGTAGGTAAAATCGAAAGGAT--TCGTTTTCGGTCCTTTAAAACATTATTGATCAGAATTAAGGGTTCGAAATTGTTGTTGACTTTATTT-----------------------------------------------------------------------------------------------------------------------------ACTCT----------TTG---TTGTT-TCCTTTAGCTTTGACTACGGAGAAAAATTCTGGCGCGTGG-A-ACATCGCTCCTGT------------G-TGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...ATCGCCTTTTTTTCCTGCCGTGACATCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
.................CTGCCGTGACATCGATGCCGGAGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCGCGTGG-A-ACATCGCTCC....................2311.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGACTACGGAGAAAAATTCTGGC.......................................2511.00100000010000000000
.......................TGACATCGATGCCGGAGAGGAAATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
droSec2
AAGATCGCCTTTTTTTCCTGCCGTGACATCGATGCCGGAGAGGAAATATGGTAAGTCG------------------A-----------------TC-----------------------------------------------------------------------------------------------------------------------------------------------CAACGATT----------------------T---TAAAGCA---------------------------------------------------------------------AAGAGA-TAGATAGTCAAACGAGAATTATTTTACAATAAATTTTTAAAGAC--------------CAAAATTT----TAAGCCATTGCTTCCTTTTTT--ATTGTAATATTTCTACTA-AAAT-----ATAATAATTATTCGTTGAATAGTAGGTAAAGTCGAAAGGAC--TCGTTTTCGGTCCTTTAAAACATTATTGATCAGAATTAAGGGTTCGAAATTGTTGTTGACTTTATTT-----------------------------------------------------------------------------------------------------------------------------ACTCT----------TTG---TTGTT-TCTTTTAGCTTTGACTACGGAGAAAAATTCTGGCGCGTGG-AAACATCGCTCCTGT------------G-TGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACATTATTGATCAGAATTAAGGG..........................................................................................................................................................................................................................................................2511.0010010
dm3
AAGATCGCCTTTTTTTCCTGCCGTGACATCGATGCCGGAGAGGAAATATGGTAAGTCG------------------A-----------------CC-----------------------------------------------------------------------------------------------------------------------------------------------CAACCATT----------------------T---GAAAGCA---------------------------------------------------------------------AAGAGA-TAGATAGACAAACGATAATTATTTTACAGTACATTTTTAAAGACATAAGG---AACCAC--------AAATAAGCATTTGCTTCTTTTTT--AATTGTTATGTTTCTGCTA-AAATATA-----A---ATATTCGTTGCATAGTAGGTAAAATTGAAAGGAT--TCGTT---------------------TGATCAGAATTAAGGGTTGGAAATTTTTGTTGACCCTATTT--------AGATTGATCACTCAACGTGAAA----------------------------------------ATC----------------------------------------------------ACTCT----------TTG---TTGTT-TCCTTTAGCTTTGACTACGGAGAAAAATTCTGGCGCGTGG-A-ACATCGCTCCTGT------------G-TTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGAAAAATTCTGGCGCG....................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GACATCGATGCCGGAGAGGAAATATGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGGAGAAAAATTCTGGCGC.....................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAATTCTGGCGCGTGG-................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGCGCGTGG-A-ACATCGCTC.....................2313.0030000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGAAAAATTCTGGCGCGT...................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAATTCTGGCGCGTGG-................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CGTGACATCGATGCCGGAGAGGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGAAAAATTCTGGCGCGTGG-A-AC............................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGACATCGATGCCGGAGAGGAAATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAATTCTGGCGCGTGG-A-ACA...........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TTTTTCCTGCCGTGACATCGATGCCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................GACATCGATGCCGGAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GACATCGATGCCGGAGAGGAAATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CGATGCCGGAGAGGAAATATGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGACATCGATGCCGGAGAGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGCGCGTGG-A-ACATCGCTCC....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCTGGCGCGTGG-A-ACATCGCTCCT...................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAATTCTGGCGCGTGG-A-ACATCGCT......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCGCGTGG-A-ACATCGCT......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGACTACGGAGAAAA...............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GACATCGATGCCGGAGAGGAAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCGATGCCGGAGAGGAAATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGCGTGG-A-ACATCGCTC.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGACTACGGAGAAAAAT.............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGAAAAATTCTGGCGCGTGG-A-ACA...........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTTTTTCCTGCCGTGACATCGATGCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGACTACGGAGAAAAATTCTGGCGC.....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GTGACATCGATGCCGGAGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGGAGAAAAATTCTGGCG......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGAGAAAAATTCTGGCGCGTGG-A-AC............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--TCGTT---------------------TGATCAGAATTAAGGT..........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGACTACGGAGAAAAATTCTGGCGCG....................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTGG-A-ACATCGCTCCTGT------------G-TTG2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAATTCTGGCGCGTGG-A-ACA...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTCCTGCCGTGACATCGATGCCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGAGAAAAATTCTGGCGCGTG..................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGCCGGAGAGGAAATATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................GTGACATCGATGCCGGAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTGGCGCGTGG-A-ACATCGCTC.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTACGGAGAAAAATTCTGGCG......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTGAAAGGAT--TCGTT---------------------TGATCA....................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAATTCTGGCGCGTGG-A-ACATCGCT......................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCTGGCGCGTGG-A-ACATCGCTC.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGAAAAATTCTGGCGCGTGG-A-ACA...........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGACCCTATTT--------AGATT....................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATGCCGGAGAGGAAATATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAATTCTGGCGCGTGG-A-AC............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTACGGAGAAAAATTCTGGCGCGT...................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTACGGAGAAAAATTCTGGCGCGT...................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTACGGAGAAAAATTCTGGCGC.....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGACTACGGAGAAAAATT............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGAGAAAAATTCTGGCGCG....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CTGCCGTGACATCGATGCCGGAGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAATTCTGGCGCGTGG-A-ACATCGCTC.....................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTTTTTTCCTGCCGTGACATCGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAAAAATTCTGGCGCGTGG-A-AC............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGAAAAATTCTGGCGCG....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTTTGACTACGGAGAAAAA..............................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCCTGCCGTGACATCGATGCCGGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACATCGATGCCGGAGAGGAAATATGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCTGGCGCGTGG-A-ACA...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAATTCTGGCGCGTGG-A-A.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAGATAGCCTTTTTTGCCTGCCGCGACATCGATGCCGGAGAGGAGATATGGTAAGTCG------------------A-----------------TC-----------------------------------------------------------------------------------------------------------------------------------------------CAACGATT----------------------T---TAAGGTT---------------------------------------------------------------------AACAGGTTAGATAGTCGAA-AATAAATATTTTAAAATGAATT-TTAAAGACAAAAAA---AAACA-------TTAAATGAGCCATTGTTTCTTTTTT-TAATTGTTATATTTTTGCTT-AAGTAAA-----A---TGACTCTTTGAGGAGTATGTAAAATAGAAAAAAT--GCGTTTTAGACCCTTTAAAACATTTTTGATCAGAATTAGGAGTTTCAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
AAGATTGCCTTTTTTGCCTGCCGCGACATCGATGCCGGAGAGGAGATATGGTAAGTTG------------------A-----------------TT-----------------------------------------------------------------------------------------------------------------------------------------------CAACGATA----------------------T---TAGAGTA---------------------------------------------------------------------AACATGTTAGATAGTCAATCGATAAATATTTTAAGGTTAAGT-ATAAAGACATAAAACCGAAACA-------TTAAATAAGCCATTTCTTCTTTTTTTTAATTATGATGC---TGTTA-AAATAAAATGTAATAA-AAGACTTTGAATAGTATGTAAAATCAAAAAAAG--GCATTTTCGAGCCTTTAAAAATTTTTTGACTATGATTAGGG-TTCTTG----T------------A-TGGTTATTCAATTGGTAACTCAACGTTTAATTGTAGCTATATAATTTCCAAAGCTTCTGTGGGTTTCTCTATT----------------------------------------------------ACTCT----------TTG---TTGTTTCTTCTTAGCTTTGACTACGGAGAAAAATTCTGGCGCGTGG-A-ACATCGCTCCTGT------------G-TGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATTCTGGCGCGTGG-A-ACATC.........................2411.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGGCGCGTGG-A-ACATCGCTCC....................2511.00101000000000
droEug1
AAGATAGCATTCTTCGCCTGCCGCGATATCGATGCCGGCGAGGAGATATGGTAAGTCT------------------A-----------------TT--------------------------------------------------------------------------------------------------------------TTGGATTATTTTATTTGGTTGTTCT--------CAACTTAT----------------------TGTGAAAAGCA---------------------------------------------------------------------AAAAAA---AGTAGAGAATCTATGAAGGTGTTAGA----------AAAGTT--------------CAAAAACT----TA-------------------------------------TT-AAAT-----GAAATTGTTAACTATCGGATCATA--TAGAAACATAGGAACTTTCATATATATTCTCTAGAAATGTCCCTACCTTGA-------------------------------AT-----------------------------------------------------------------------------------------------------------------------------ACCCTTGGATATTTTTAT---TTGCTTCGTTTTAGTTACGACTACGGGGAGAAGTTTTGGCGCGTAG-A-ACACCGGTCCAGT------------G-TGGSizeHit CountTotal NormTotal
No Reads
droBia1
AAGATAGCCTTCTTCGCGTGCCGCGACATCGATGCCGGGGAGGAGATATGGTGAGTGG------------------A-----------------TC-----------------------------------------------------------------------------------------------------------------------------------------------CAAGGATGAGG--------CTAAAACTCATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTGCT-AGAAAACAGCTTGTCAAC------------TGTGASizeHit CountTotal NormTotal
No Reads
droTak1
TTATTTTCATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTTCCTTTCAGCTACGACTACGGCGAGAAGTTCTGGCGCGTGG-A-GCACCGCTCCAGT------------G-TGGSizeHit CountTotal NormTotal
No Reads
droEle1
AAGATCGCCTTCTTCGCCTGCCGCGACATCGATGCCGGCGAGGAGATATGGTAAGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAGATCGCCTTCTTCGCCTGCCGCGACATCGACGCCGGCGAAGAGATCTGGTAAGTCC------------------------------------------------------------------------------------------------------------------------------------------------TGAATTGAATCATGTTATGAAGT------AAAGGATTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG-------TATATAGATGCAATGTATTCGTATT-TATCAGTTACATTTTCTATCCAATTAAA-----A---AC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCGCTTTTTGTAATGTGTTCTTATCTTTTTTAAAAGTTAACACCAAATTATGTTTTTCT----------AAT---TTGTTTCCTTTCAGCTACGACTACGGGGAGAAGTTCTGGCGCGTGG-A-GCACCGCTCTAGT------------G-TGGSizeHit CountTotal NormTotal
No Reads
droFic1
AAAATCGCGTTTTTCGCCTGCCGCGACATTGATGCCGGCGAGGAGATCTGGTAAGTTTGAAAATAACTATCAAGTGAGTCACTTACTAAGTAAACCAAAAATGCTAAATATTAGTTAAACAAATGATTAAATTGTACAAAATCCCAAAATTTGTACAACTTTGTTGGTATAGGCGTTAATTACTAATTACTATTGGTGATCCGGAACTGA--------------------------------------GGAATTTTTA-----------TATGATACGCAGACATTGGCATATTAATTAAGAAATTATTGATATAATTGGCAATCATTTTTTGTTTTGAGGAACCAATTAAGAAG---TCTAGGG------------------------------------------------------------------------------------------------------------------------GAATAATGAAGATGTAGGAATAATTGCCATTCC--GATTTGTTGACC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT---TCG-TTCCTTTTAGCTACGACTACGGGGAGAAGTTTTGGCGCGTGG-A-CCGCCGCTCCAGT------------G-TGGSizeHit CountTotal NormTotal
No Reads
droKik1
AAGATTGCATTCTTTGCATGCCGCGACATTGATGCCGGCGAGGAGATATGGTATGTGAAAAAGTCAAGTTATAGTGATTCAATTTTTAAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTTTAATTTTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-CAGSizeHit CountTotal NormTotal
No Reads
droAna3
AAGATAGCATTCTTCGCCTGCCGCGACATCGACGCCGGCGAGGAGATCTGGTAAGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................CGCGACATCGACGCCGGCGAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droBip1
ATTATAGTTTACATCCTTTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTC---TAA-TCCCCACCAGCTATGATTATGGAGAGAAGTTCTGGCGTGCCG-A-GCATCGCTCCAAT------------A-TGGSizeHit CountTotal NormTotal
No Reads
dp5
AATTGTGCCTGCCTCTCTCT-----ACATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT----------AAGTTCTGCTTTTTTCACAGCTACGACTACGGAGAAAAGTTCTGGCGCACAG-A-ACATCGCTCCGCA------------C-TTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGAAAAGTTCTGGCGCACAG-A-AC............................2712.0020000000002
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGAAAAGTTCTGGCGCACAG-A-..............................2511.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGTTCTGGCGCACAG-A-..............................2011.0010000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAGTTCTGGCGCACAG-A-A.............................2211.0010000100000
droPer2
AATTGTGCCTGCCTCTCTCT-----ACATCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT----------AAGTTCTGCTTTTTTCACAGCTACGACTACGGAGAAAAGTTCTGGCGGACAG-A-ACATCGCTCCGCA------------C-TTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGGAGAAAAGTTCTGGCGGACAG-................................2612.002200000
droWil2
AAAATTGCATTTTTTGCCTGTCGCGACATCGATTCGGGCGAGGAAATCTGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........ATTTTTTGCCTGTCGCGACATCGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.....................CGCGACATCGATTCGGGCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
droVir3
TT-------TTTTTTGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCACTAGCTACGATTATGGAGAAAAATTCTGGCGTGCCG-A-TCAACGTATCAGC------------G-GAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGCGTGCCG-A-TCAACGTA......................2111.001000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCG-A-TCAACGTATCAGC------------.....2011.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
GCTTTTCACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTATTCACATTTTCGTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTAATTAGCTACGATTATGGCGAGAAGTTCTGGCGCGCTG-A-ACAGCGCAGCAGTCAGCGTGGCGGCG-CCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACGATTATGGCGAGAAGTTCTG.........................................2511.001000001
droGri2
TTAAGTAGTTCAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCATT------------------------------------------------------------------------------------------------------------------------------------------------------AACTACAATTACATTTACAGCTATGATTATGGCGAAAAGTTTTGGCGCTCCG-A-ACAACGTTCCAGC------------G-GCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 11:31 AM