dsi_17144

TTGCCACCGCGGCTCTTTTACGCAGTCCGGTCGTCTCGTCTAGGTCCATGGCGTCATTACCCCCAAGAGCAGTTTAGCCTTCCACAATAGCTGCAAGAAAATCTTGCATTTAGCAGCTGCAGGTCCGATAAGAACAAAAGCGATGTAAATATAAGCCAGAATAAGTAACTATAAAATACGTTTATCGTAACGCTTATTAGGTATTTTAGTTTGAGGCAGACACAAGAAAATAATAAATTATCCGTAAAAG ******************************************************************************************************((((((.....(((.....((......)).....)))))))))......................*******************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553488 RT_0-2 hours eggs	SRR553486 Makindu_3 day-old ovaries	SRR553487 NRT_0-2 hours eggs	O001 Testis	SRR553485 Chicharo_3 day-old ovaries	GSM343915 embryo	SRR618934 dsim w501 ovaries	M025 embryo
.........................ACCGGTCGTCTCGTC..................................................................................................................................................................................................................	15	1	3	0.33	1	0	0	1	0	0	0	0	0
...................................................................................................................................................AATATAAGCCAGAATAAGTAAC.................................................................................	22	0	10	0.30	3	0	0	0	3	0	0	0	0
.....................................................TGATTACCCCCAAGA......................................................................................................................................................................................	15	1	8	0.25	2	2	0	0	0	0	0	0	0
........................................................................................................TGCATTTAGCAGCTGCAGGTCCGATAAGA.....................................................................................................................	29	0	5	0.20	1	0	1	0	0	0	0	0	0
................................................................................................................................TAAGAACAAAAGCGATGTAAATAT..................................................................................................	24	0	5	0.20	1	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................TTTTAGTTTGAGGCAGACACAAGAAAA....................	27	0	5	0.20	1	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................TTATTAGGTATTTTAGTTTGAGACAGA..............................	27	1	5	0.20	1	0	0	1	0	0	0	0	0
.................................................................................................................................................................TAAGTAACTATAAAATACGTTTATCGT..............................................................	27	0	5	0.20	1	1	0	0	0	0	0	0	0
.....................................................................................................................TGCAGGTCCGATAAGAACAAAAGCGA...........................................................................................................	26	0	5	0.20	1	1	0	0	0	0	0	0	0
.......................................................ATTACCCCCAAGAGT....................................................................................................................................................................................	15	1	7	0.14	1	1	0	0	0	0	0	0	0
.......................................................................................................................CAGGTCCGAAAAGAAGA..................................................................................................................	17	2	20	0.10	2	0	0	0	0	2	0	0	0
..................................................................................................................................................................................................TATTTGGTATTCTAGTTGGAG...................................	21	3	15	0.07	1	0	0	0	0	0	1	0	0
...................................................................................................................................................AATATAAGACAGAATA.......................................................................................	16	1	16	0.06	1	0	0	0	0	0	0	1	0
...................................................................................................................................TAACAAAACCGATGTAAA.....................................................................................................	18	2	18	0.06	1	1	0	0	0	0	0	0	0
............................GGTCGGTTCGTCTAGG..............................................................................................................................................................................................................	16	2	20	0.05	1	0	0	0	0	1	0	0	0
.........................................................................................................................................................................................CGTAACGATTAATAGGGA...............................................	18	3	20	0.05	1	0	0	0	0	0	0	0	1

AACGGTGGCGCCGAGAAAATGCGTCAGGCCAGCAGAGCAGATCCAGGTACCGCAGTAATGGGGGTTCTCGTCAAATCGGAAGGTGTTATCGACGTTCTTTTAGAACGTAAATCGTCGACGTCCAGGCTATTCTTGTTTTCGCTACATTTATATTCGGTCTTATTCATTGATATTTTATGCAAATAGCATTGCGAATAATCCATAAAATCAAACTCCGTCTGTGTTCTTTTATTATTTAATAGGCATTTTC *******************************************************************************((((((.....(((.....((......)).....)))))))))......................******************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 dsim w501 ovaries	SRR553485 Chicharo_3 day-old ovaries	SRR553486 Makindu_3 day-old ovaries	SRR553487 NRT_0-2 hours eggs	SRR553488 RT_0-2 hours eggs	M024 male body	M053 female body
.....................................................AGTAATGGGGGTTCT......................................................................................................................................................................................	15	0	1	1.00	1	0	1	0	0	0	0	0
.........................AGGCCAGGAGAGCAGATCCTCG...........................................................................................................................................................................................................	22	3	1	1.00	1	0	0	1	0	0	0	0
...........................................................................................................................................................................................AGTGCGAATGATCCATAA.............................................	18	2	6	0.50	3	0	0	1	1	1	0	0
.....................................................AGTAATGGGGGTACTTG....................................................................................................................................................................................	17	2	20	0.45	9	9	0	0	0	0	0	0
.....................................................AGTAATGGGGGTACTTGT...................................................................................................................................................................................	18	2	3	0.33	1	1	0	0	0	0	0	0
......................GTGAGGCCAGGAGAGCA...................................................................................................................................................................................................................	17	2	11	0.27	3	2	0	0	1	0	0	0
.....................................................AGTAATGGGGGTACT......................................................................................................................................................................................	15	1	8	0.25	2	2	0	0	0	0	0	0
...........................................................................................................................................................................................AGTGCGAATGATCCATAAG............................................	19	3	9	0.22	2	0	0	0	2	0	0	0
.......................TGAGGCCAGCAGAGC....................................................................................................................................................................................................................	15	1	5	0.20	1	0	0	0	0	1	0	0
................................CAGTGCAGATCAAGGTA.........................................................................................................................................................................................................	17	2	6	0.17	1	0	1	0	0	0	0	0
...........................................................GGGAGTTCTGGGCAAATC.............................................................................................................................................................................	18	3	20	0.15	3	3	0	0	0	0	0	0
..........................................................TGGGGGTTCTGGGCAAA...............................................................................................................................................................................	17	2	15	0.13	2	2	0	0	0	0	0	0
..............................................................................................................ACCGTCGACGTCCAGGCTATGT......................................................................................................................	22	3	8	0.13	1	0	0	0	0	0	1	0
.................................................................................................................................................................................................................AATCTCCGTCAGTGATCTTTTAT..................	23	3	8	0.13	1	0	0	0	1	0	0	0
.........................................................ATGGGAGTTCTGGGCAAAT..............................................................................................................................................................................	19	3	9	0.11	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................AGTGCGAATGATCCATA..............................................	17	2	10	0.10	1	0	0	0	1	0	0	0
.......................TGAGGCCAGGAGAGCA...................................................................................................................................................................................................................	16	2	20	0.10	2	0	0	1	0	1	0	0
...................................................................TCGTCAAATCGGAAGGTGT....................................................................................................................................................................	19	0	11	0.09	1	1	0	0	0	0	0	0
...............................................................................................ACTTTTAGAACGTAAATCGTCGACGT.................................................................................................................................	26	1	11	0.09	1	0	1	0	0	0	0	0
...................................................TCAGTAATGGGGGTACTTG....................................................................................................................................................................................	19	3	12	0.08	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................TGATTGCGAATGATCCATAA.............................................	20	3	13	0.08	1	0	0	0	0	1	0	0
.............................................................................................................................................................................................TGCGAATGATCCATAA.............................................	16	1	17	0.06	1	0	0	0	1	0	0	0
.......................................................TAATGGGGGTACTTGT...................................................................................................................................................................................	16	2	20	0.05	1	1	0	0	0	0	0	0
.................AATGGGTCAGGACAGC.........................................................................................................................................................................................................................	16	2	20	0.05	1	0	0	0	0	1	0	0
................................CAAAGCTGATCCAGGT..........................................................................................................................................................................................................	16	2	20	0.05	1	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................................TATTATTTATTAGGCATA...	18	2	20	0.05	1	0	0	0	0	0	0	1
...........................................................................................................................................................................................ATTGCGAATGATCCTT...............................................	16	2	20	0.05	1	0	0	1	0	0	0	0
..............................................................................................................................................................................................GCGAATGATCCATAA.............................................	15	1	20	0.05	1	0	1	0	0	0	0	0
...........................................................................................................................................................................................AGTGCGAATGATCCA................................................	15	2	20	0.05	1	0	0	0	0	1	0	0
..........................................CCAGGTACAGCAGTA.................................................................................................................................................................................................	15	1	20	0.05	1	1	0	0	0	0	0	0
......................GTGAGGCCAGGAGAGC....................................................................................................................................................................................................................	16	2	20	0.05	1	0	0	1	0	0	0	0

Species	Coordinate	ID	Alignment
droSim2	2l:22817320-22817569 -	dsi_17144	TTGCCACCGCGGCTCTTTTACGCAGTCCGGTCGTCTCGTCTAGGTCCATGGCGTCA------------TTACCCCCAAGAGCAGTTTAGCCTTCCACAATAGCTGCAAGAAAATCTTGCATTTAGCAGCTGCAGGTCCGATAAGAACAAAAGCGATGTAAATATAAGCCAGAATAAGTAACTATAAAATACGTTTATCGTAACGCTTATTAGGTATTT-TAG-------TTTGAGGCAGACACAAG----AAAATAATAAATTATCCGTAAAAG
droSec2	scaffold_76:62317-62501 +		T--------------------------------------------------------------------TTCGTCCCAGAGCAGTTTAGCCTTCCACAATAGCTGCAAGAAAATCTTGCATTTAGCAGCTGCAGGTCCGATGAGAACAAAAAGGATGTTAATATAAGCCAGAATAAGTAACTATAAGATAG---------AACGCTTATTAGGTATTT-TAG-------TTTGAGACAGACACAAG----AAGATAATAAATTATCCGTAAAAG
dm3	chrU:1106581-1106730 +		CA------------------------------------TCCAGGTCGATTGCAACTTTAAAGGATGACTTTCGTCCCAGTTCAGTTTAGCCTTCCACAAATGCTGCACGAAAATCTTGCATTTAGCA---------------------------------------GCAATAGTCG------ATAAAATAG---------AAGGCTATCTAGGTTTTT-TAG-------TTTGAGGTAGAGACAAGAA--------------------------
droEre2	scaffold_4784:25547049-25547264 -		CA------------------------------------TCCAGGTCGATTGCAACTCTAAAGAAAGACTTTCGTCCCAGTTCAGTGTAGCCTTCTACAATTGCTGCAAGAAAATCTTGCATTTAGCAACTGCAGGTCCGATAAGTCCCAGAAAGTCGTAAGTATAAGCAATATTCG------ATAAGATAG---------AGCGCTTACTAGGTTTTTTTAG-------TTTAAGGCAGAGACAAAAACGAAAATAATAAATTATCCGTAGATG
droYak3	v2_chr2L_random_010:166965-167131 -		C---------------------------------------------------------------------------------AGTTCAGCCTTCCACAATTGCTGCAAGAAAATCTTGCAATTAGCAACTGCAGGTACGAAAAGACCAAAAGGGTCGTAAATATGAGCAATATTCG------ATAAGATAG---------AACCCTTTCTACGTTTTA--AA-------TTTGAGGCACACATAAGGACG--AATAATAAATTCTCCGTAGATG
droBia1	scf7180000299726:1038-1092 -		TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAGAA-TT-TAC-------TTTAAGATAAAAACAAG----AAAACAACAATATATTGACAAAAA
droTak1	scf7180000415315:8459-8622 -		C--------------------------------------------------------------------------CCAAGTCAGCTTTGCCTTCCATAGATTCTGCAAAAAAATCTTGCACTTTGCCATTACTGGTCCGATAAGGCCAAGGGGGTTGTATAAATGGGCCACAGTTG------ATAGGATGG---------AACGTTTACTGGGTTTTG-TAC-------TTTGGGGTAGCGATAACAATGAAAACAAGAAA-------------
droEle1	scf7180000490657:6734-6910 -		C--------------------------------------------------------------------------CCAAGTCACCTCAGCCTTCCATAGATTCTGCAAAAAGATCTTGCACCTTGCAATTACCGGTCCGATAAGGCCAAGGGGGCCGTAGAAATGGGCAACAGTTG------ATAGGATGG---------AACGCTTACTGTGTTTTG-TAT-------TTTGGGGTAGCGATAACAATGAAAATAATAAATTGTCAATAGAGG
droRho1	scf7180000779853:2344-2411 +		C---------------------------------------------------------------------------------AACTTCGCTCTACAGACTTGTTGCAGGAAAATCTTGGCCTTGGCAACCACAGGACCAATGAGACCAA-----------------------------------------------------------------------------------------------------------------------------
droAna3	scaffold_13250:2189831-2189888 +		C----------------------------------------------------------------------------------------------ACAGCTTCTGCAAGAATATTTTTGATTTGGTAGCGACTGGACCAACAAGGCCCAAAG--------------------------------------------------------------------------------------------------------------------------
dp5	Unknown_group_93:5456-5646 +		TG------------------------------------------------------------GCAGACTTTCATCCCAATGAAGCTTTTCTTTCCACAGCTGCTGTAGAAATATTTTTGCTTTAGTAATTACTGACCCTATAAGTCCGAGTGGATCATAAAATCGTGCAATAGTTG------ACAATACAA---------TTCGCTTAGTTGGTTTCG-AAGGGACTTGATTGGGACA-------GAATGAAAATAATAGCTCATCCGAAGTGG
droPer2	scaffold_1701:1465-1655 -		TG------------------------------------------------------------GCAGACTTTCATCCCAATGAAGCTTTTCTTTCCACAGCTGCTGTAGAAATATTTTTGCTTTAGTAATAACTGGCCCTATAAGTCCGAGTGGATCATAAAATCGTGCAATAGTTG------ACAATACAA---------CTCGCTTAGTTGGTTTCG-AAGGGACTTGATTGGGACA-------GAATGAAAATAATAGCTTATCCGAAGTGG
droVir3	scaffold_12891:139686-139784 -		----------------------------------------------------------------------------------AGCTTCTCCTTCCAGATCTGCTGCATAAAGATTTTAGCCTTGGCAATTACCAGCCCTATGAGTCCAAGCGGGTCATACAAGCGAGCTATAGTCG------ATAGC---------------------------------------------------------------------------------------
droMoj3	scaffold_6540:772839-773007 -		----------------------------------------------------------------------------------AGTTTATACCTCCAGAGTTGTTGCAAGAAAATTTTAGCCTTCGTTATTACTGGGCCGACCAGGCCGAGGGGATCATAAAACCGAGCAATAGACG------AGAGAACAG---------AGCGCCTGGAGGGCTTAG-AGG-------CTGAATTCAGGGCTAGATATGAGAAAAGAAGTTGATCAGATGCCG
droGri2	scaffold_14940:4150-4315 +		-------------------------------------------------------------------------------------TTTGCCTTCCAGAGTTGCTGCAGGAATATTTTGCACCTAGCAATTGCAGGTCCAATAAGACCAAGAGGATCATAGATACACGCAATCGTGT------ACAAGATGG---------ATCGCTTGGAGAGTTTTG-AAT-------TTGGGCGAACAGGTGACAACAAAAACAAAAGATTATCCGAAACTG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

TTGCCACCGCGGCTCTTTTACGCAGTCCGGTCGTCTCGTCTAGGTCCATGGCGTCA------------TTACCCCCAAGAGCAGTTTAGCCTTCCACAATAGCTGCAAGAAAATCTTGCATTTAGCAGCTGCAGGTCCGATAAGAACAAAAGCGATGTAAATATAAGCCAGAATAAGTAACTATAAAATACGTTTATCGTAACGCTTATTAGGTATTT-TAG-------TTTGAGGCAGACACAAG----AAAATAATAAATTATCCGTAAAAG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...............................................................................................................................................................AATATAAGCCAGAATAAGTAAC.............................................................................................	22	10	0.30	3	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGCATTTAGCAGCTGCAGGTCCGATAAGA.................................................................................................................................	29	5	0.20	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................TAAGAACAAAAGCGATGTAAATAT..............................................................................................................	24	5	0.20	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................TTT-TAG-------TTTGAGGCAGACACAAG----AAAA....................	27	5	0.20	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TAAGTAACTATAAAATACGTTTATCGT..........................................................................	27	5	0.20	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.................................................................................................................................TGCAGGTCCGATAAGAACAAAAGCGA.......................................................................................................................	26	5	0.20	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.......................................................A------------TTACCCCCAAGAGT................................................................................................................................................................................................	15	7	0.14	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0

droSec2

T--------------------------------------------------------------------TTCGTCCCAGAGCAGTTTAGCCTTCCACAATAGCTGCAAGAAAATCTTGCATTTAGCAGCTGCAGGTCCGATGAGAACAAAAAGGATGTTAATATAAGCCAGAATAAGTAACTATAAGATAG---------AACGCTTATTAGGTATTT-TAG-------TTTGAGACAGACACAAG----AAGATAATAAATTATCCGTAAAAG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

dm3

CA------------------------------------TCCAGGTCGATTGCAACTTTAAAGGATGACTTTCGTCCCAGTTCAGTTTAGCCTTCCACAAATGCTGCACGAAAATCTTGCATTTAGCA---------------------------------------GCAATAGTCG------ATAAAATAG---------AAGGCTATCTAGGTTTTT-TAG-------TTTGAGGTAGAGACAAGAA--------------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...............................................................................................................................................................................................................TCTAGGTTTTT-TAG-------TTTGAGGTAGAGA................................	27	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................TAG-------TTTGAGGTAGAGACAAGAA--------------------------	22	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................TTCGTCCCAGTTCAGTTTAGCCTTC....................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TCG------ATAAAATAG---------AAGGCTATC.................................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................TCGATTGCAACTTTAAAGGATG................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................CATTTAGCA---------------------------------------GCAATAGTCG------A...........................................................................................	20	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................CAACTTTAAAGGATGACTTTCG.........................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TCCCAGTTCAGTTTAGCCTTCCACAAA..............................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................TGCAACTTTAAAGGATGACTTTCGTC.......................................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................AGTTTAGCCTTCCACAAATGCTGCAC......................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................CAGGTCGATTGCAACTTTAAAGGATGAC..............................................................................................................................................................................................................	28	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................TTGCAACTTTAAAGGATGACTTTCGTC.......................................................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................TCCAGGTCGATTGCAACTTTAA......................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................ATTGCAACTTTAAAGGATGACTTTCGT........................................................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................CAGGTCGATTGCAACTTTAAAGGAT.................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................TAG---------AAGGCTATCTAGGTTTT.........................................................	20	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................TTGAGGTAGAGACAAGAA--------------------------	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TAGCA---------------------------------------GCAATAGTCG------ATAAAATAG---------AA........................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

CA------------------------------------TCCAGGTCGATTGCAACTCTAAAGAAAGACTTTCGTCCCAGTTCAGTGTAGCCTTCTACAATTGCTGCAAGAAAATCTTGCATTTAGCAACTGCAGGTCCGATAAGTCCCAGAAAGTCGTAAGTATAAGCAATATTCG------ATAAGATAG---------AGCGCTTACTAGGTTTTTTTAG-------TTTAAGGCAGAGACAAAAACGAAAATAATAAATTATCCGTAGATG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

droYak3

C---------------------------------------------------------------------------------AGTTCAGCCTTCCACAATTGCTGCAAGAAAATCTTGCAATTAGCAACTGCAGGTACGAAAAGACCAAAAGGGTCGTAAATATGAGCAATATTCG------ATAAGATAG---------AACCCTTTCTACGTTTTA--AA-------TTTGAGGCACACATAAGGACG--AATAATAAATTCTCCGTAGATG

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droBia1

TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAGAA-TT-TAC-------TTTAAGATAAAAACAAG----AAAACAACAATATATTGACAAAAA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

C--------------------------------------------------------------------------CCAAGTCAGCTTTGCCTTCCATAGATTCTGCAAAAAAATCTTGCACTTTGCCATTACTGGTCCGATAAGGCCAAGGGGGTTGTATAAATGGGCCACAGTTG------ATAGGATGG---------AACGTTTACTGGGTTTTG-TAC-------TTTGGGGTAGCGATAACAATGAAAACAAGAAA-------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

C--------------------------------------------------------------------------CCAAGTCACCTCAGCCTTCCATAGATTCTGCAAAAAGATCTTGCACCTTGCAATTACCGGTCCGATAAGGCCAAGGGGGCCGTAGAAATGGGCAACAGTTG------ATAGGATGG---------AACGCTTACTGTGTTTTG-TAT-------TTTGGGGTAGCGATAACAATGAAAATAATAAATTGTCAATAGAGG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

C---------------------------------------------------------------------------------AACTTCGCTCTACAGACTTGTTGCAGGAAAATCTTGGCCTTGGCAACCACAGGACCAATGAGACCAA-----------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droAna3

C----------------------------------------------------------------------------------------------ACAGCTTCTGCAAGAATATTTTTGATTTGGTAGCGACTGGACCAACAAGGCCCAAAG--------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

dp5

TG------------------------------------------------------------GCAGACTTTCATCCCAATGAAGCTTTTCTTTCCACAGCTGCTGTAGAAATATTTTTGCTTTAGTAATTACTGACCCTATAAGTCCGAGTGGATCATAAAATCGTGCAATAGTTG------ACAATACAA---------TTCGCTTAGTTGGTTTCG-AAGGGACTTGATTGGGACA-------GAATGAAAATAATAGCTCATCCGAAGTGG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATG........................	23	9	20.00	180	0	102	0	0	0	0	2	47	29	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAAT.........................	22	9	16.22	146	1	77	1	0	0	0	8	52	7	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATGA.......................	24	9	15.56	140	0	53	0	0	0	0	2	51	34	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATGAA......................	25	9	6.22	56	0	19	0	0	0	0	1	15	21	0
.......................................................................................................TGTAGAAATATTTTTGCTTTAGTAA..................................................................................................................................................	25	1	6.00	6	0	6	0	0	0	0	0	0	0	0
.......................................................................................................TGTAGAAATATTTTTGCTTTAGTA...................................................................................................................................................	24	1	6.00	6	0	2	0	0	0	0	0	4	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAA..........................	21	9	5.33	48	0	23	0	0	1	0	1	17	6	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATGAAAA....................	27	9	3.11	28	0	19	0	0	0	0	4	2	3	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GA...........................	20	9	3.11	28	0	19	0	0	0	0	0	6	3	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAAA.........................	22	9	3.00	27	0	13	0	0	0	0	0	13	1	0
.......................................................................................................TGTAGAAATATTTTTGCTTTAGT....................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	3	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATGAAA.....................	26	9	2.89	26	0	11	0	0	0	0	2	7	6	0
......................................................................................................................................................TGGATCATAAAATCGTGCAATAGTTG------............................................................................................	26	6	2.00	12	0	12	0	0	0	0	0	0	0	0
......................................................................................................................................................TGGATCATAAAATCGTGCAATAGT....................................................................................................	24	6	1.83	11	0	9	0	0	0	0	0	1	1	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATA........................	23	9	1.78	16	0	8	0	0	0	0	0	8	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------G............................	19	9	1.67	15	0	12	0	0	0	0	0	2	1	0
......................................................................................................................................................TGGATCATAAAATCGTGCAATAGTTG------A...........................................................................................	27	6	1.50	9	0	5	0	0	0	1	0	0	3	0
......................................................................................................................................................TGGATCATAAAATCGTGCAATAG.....................................................................................................	23	6	1.50	9	0	6	0	0	0	0	0	3	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAAAA........................	23	9	1.33	12	0	12	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TGATTGGGACA-------GAATGAAAATAATAGC.............	27	6	1.33	8	0	0	0	0	0	0	0	3	5	0
.............................................................................................................................................................................................................................GGGACTTGATTGGGACA-------GAATG........................	22	9	1.22	11	0	11	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................GGACTTGATTGGGACA-------GAATGAAAA....................	25	9	1.22	11	0	11	0	0	0	0	0	0	0	0
...................................................................................................CTGCTGTAGAAATATTTTTGCTTTAG.....................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................TAGTTG------ACAATACAA---------TTCGCTTAGT................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................GTAGAAATATTTTTGCTTTAGT....................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................GGACTTGATTGGGACA-------GAATGAAA.....................	24	9	0.89	8	0	8	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATC........................	23	9	0.89	8	0	0	0	0	0	0	0	0	8	0
...............................................................................TGAAGCTTTTCTTTCCACAGCTGCTG.........................................................................................................................................................................	26	6	0.83	5	0	5	0	0	0	0	0	0	0	0
...............................................................................TGAAGCTTTTCTTTCCACAGCTG............................................................................................................................................................................	23	6	0.67	4	0	4	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................GGACTTGATTGGGACA-------GAATGAA......................	23	9	0.67	6	0	5	0	0	0	0	0	1	0	0
.............................................................................................................................................................................................................................GGGACTTGATTGGGACA-------GAATGAAA.....................	25	9	0.67	6	0	4	0	0	0	0	0	2	0	0
...............................................................................TGAAGCTTTTCTTTCCACAGCTGC...........................................................................................................................................................................	24	6	0.67	4	0	4	0	0	0	0	0	0	0	0
.....................................................................................................................................................GTGGATCATAAAATCGTGCAATAGTTG------............................................................................................	27	6	0.67	4	0	4	0	0	0	0	0	0	0	0
......................................................................................TTTCTTTCCACAGCTGCTGTAGA.....................................................................................................................................................................	23	6	0.67	4	0	4	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TGGTTTCG-AAGGGACTTGATTGG........................................	23	8	0.63	5	0	5	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TGAAAATAATAGCTCATCCGAAG...	23	5	0.60	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TGGGACA-------GAATGAAAATAATAGCTCATC........	28	6	0.50	3	0	2	0	0	0	0	0	0	1	0
...................................................................................................................................................GAGTGGATCATAAAATCGTGCAATAG.....................................................................................................	26	6	0.50	3	0	0	0	0	0	0	0	2	1	0
............................................................................................................................................TAAGTCCGAGTGGATCATAAAATCG.............................................................................................................	25	6	0.50	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TGGGACA-------GAATGAAAATAATAGC.............	23	6	0.50	3	0	2	0	0	0	0	0	1	0	0
......................................................................................................................................................TGGATCATAAAATCGTGCA.........................................................................................................	19	6	0.50	3	0	3	0	0	0	0	0	0	0	0
......................................................................................TTTCTTTCCACAGCTGCTGTAGAAA...................................................................................................................................................................	25	6	0.50	3	0	2	0	0	0	0	0	0	1	0
.............................................................................................................................................................................................................................GGGACTTGATTGGGACA-------GAAT.........................	21	9	0.44	4	0	4	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................GGGACTTGATTGGGACA-------GAATGA.......................	23	9	0.44	4	0	3	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................GACTTGATTGGGACA-------GAATGAAAA....................	24	9	0.44	4	0	4	0	0	0	0	0	0	0	0
........................................................................................................................................................GATCATAAAATCGTGCAATAGTTG------ACAA........................................................................................	28	6	0.33	2	0	0	0	0	0	0	0	0	2	0
......................................................................................................................................................TGGATCATAAAATCGTGCAATAGTT...................................................................................................	25	6	0.33	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................TTCTTTCCACAGCTGCTGTAGAAA...................................................................................................................................................................	24	6	0.33	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................GATCATAAAATCGTGCAATAGTTG------............................................................................................	24	6	0.33	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................GGACTTGATTGGGACA-------GAATGA.......................	22	9	0.33	3	0	3	0	0	0	0	0	0	0	0
..........................................................................................TTTCCACAGCTGCTGTAGA.....................................................................................................................................................................	19	6	0.33	2	0	0	0	0	0	0	0	2	0	0
.............................................................................................................................................................................................................................GGGACTTGATTGGGACA-------GAATGAAAA....................	26	9	0.33	3	0	3	0	0	0	0	0	0	0	0
...................................................................................................................................................GAGTGGATCATAAAATCGTGCAA........................................................................................................	23	6	0.33	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................GTGGATCATAAAATCGTGCAATAGT....................................................................................................	25	6	0.33	2	0	1	0	0	1	0	0	0	0	0
.............................................................................................................................................................................................................................GGGACTTGATTGGGACA-------GAA..........................	20	9	0.33	3	0	1	0	0	0	0	0	2	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATT........................	23	9	0.33	3	0	2	0	0	0	0	0	1	0	0
.................................................................................................AGCTGCTGTAGAAATATTTTTGC..........................................................................................................................................................	23	7	0.29	2	0	1	0	0	0	0	0	1	0	0
........................................................................................................................................................................................................................CG-AAGGGACTTGATTGGGAC.....................................	20	8	0.25	2	0	0	0	0	0	0	0	0	2	0
....................................................................TTTCATCCCAATGAAGCTTTTCTTTCC...................................................................................................................................................................................	27	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TGGTTTCG-AAGGGACTTGATA..........................................	21	8	0.25	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------A............................	19	9	0.22	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATGAAAAA...................	28	9	0.22	2	0	0	0	0	0	0	0	0	2	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GTT..........................	21	9	0.22	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGAC.....................................	17	9	0.22	2	0	0	0	0	0	0	0	1	1	0
..............................................................................................................................................................................................................................GGACTTGATTGGGACA-------GAATG........................	21	9	0.22	2	0	2	0	0	0	0	0	0	0	0
.........................................................................TCCCAATGAAGCTTTTCTTTCCACAGC..............................................................................................................................................................................	27	5	0.20	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TAATAGCTCATCCGAAGTGG	20	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.............................................................................AATGAAGCTTTTCTTTCCACAG...............................................................................................................................................................................	22	5	0.20	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TAATAGCTCATCCGAAGTG.	19	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.............................................................................AATGAAGCTTTTCTTTCCACAGC..............................................................................................................................................................................	23	5	0.20	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................TGAAAATAATAGCTCATCCGAAGTGG	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................TGGATCATAAAATCGTGCAATAGTTT------............................................................................................	26	6	0.17	1	0	0	0	0	0	0	0	1	0	0
...............................................................................TGAAGCTTTTCTTTCCACAGCT.............................................................................................................................................................................	22	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TGGGACA-------GAATGAAAATAATAGCTC...........	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................CGAGTGGATCATAAAATCGTG...........................................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................GACTTGATTGGGACA-------GAATGAAAATAA.................	27	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................ACAGCTGCTGTAGAAATATT...............................................................................................................................................................	20	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................GAGTGGATCATAAAATCGTGC..........................................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...............................................................................TGAAGCTTTTCTTTCCACAGC..............................................................................................................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................GACA-------GAATGAAAATAATAGCTCATCC.......	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................TGGATCATAAAATCGTGCAAT.......................................................................................................	21	6	0.17	1	0	0	0	0	0	0	0	1	0	0
......................................................................................TTTCTTTCCACAGCTGCTGTAGAA....................................................................................................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................GAGTGGATCATAAAATCGTGCAATAGT....................................................................................................	27	6	0.17	1	0	0	0	0	0	0	1	0	0	0
.............................................................................................................................................AAGTCCGAGTGGATCATAAAATCG.............................................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TGGGACA-------GAATGAAAATAATAGCTCATCC.......	29	6	0.17	1	0	1	0	0	0	0	0	0	0	0
............................................................................................TCCACAGCTGCTGTAGAAATATTT..............................................................................................................................................................	24	6	0.17	1	0	0	0	0	0	0	0	0	1	0
..........................................................................................TTTCCACAGCTGCTGTAGAAATATT...............................................................................................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................GATTGGGACA-------GAATGAAAATAATAGC.............	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................GGATCATAAAATCGTGCA.........................................................................................................	18	6	0.17	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................TCCGAGTGGATCATAAAAT...............................................................................................................	19	6	0.17	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................TTGGGACA-------GAATGAAAATAATAGC.............	24	6	0.17	1	0	0	0	0	0	0	0	0	1	0
.......................................................................................TTCTTTCCACAGCTGCTGTAGA.....................................................................................................................................................................	22	6	0.17	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................TAAGTCCGAGTGGATCATAAAAT...............................................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................TTGGGACA-------GAATGAAAATAATAGCTCATC........	29	6	0.17	1	0	0	1	0	0	0	0	0	0	0
...............................................................................TGAAGCTTTTCTTTCCACAGCTGCT..........................................................................................................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................GATCATAAAATCGTGCAATAGTTG------A...........................................................................................	25	6	0.17	1	0	0	0	0	0	0	0	1	0	0
......................................................................................................................................................................................................................................TTGGGACA-------GAATGAAAATAAT................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................GGATCATAAAATCGTGCAATAGTTG------............................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................TGCTGTAGAAATATTTTT............................................................................................................................................................	18	7	0.14	1	0	0	0	0	0	0	0	0	1	0
......................................................................................................................................................TGGATCATAAAATCGTGCAATAGAAA------............................................................................................	26	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TCGCTTAGTTGGTTTCG-AAGGA..................................................	22	7	0.14	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................................................................TGGTTTCG-AAGGGACTTGATTGGG.......................................	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TGGTTTCG-AAGGGACTTGATTGGGA......................................	25	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................TTTTCTTTCCACAGCTGCTGTA.......................................................................................................................................................................	22	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TAGTTGGTTTCG-AAGGGACT...............................................	20	8	0.13	1	0	0	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................TCG-AAGGGACTTGATTGGG.......................................	19	8	0.13	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................TAGTTGGTTTCG-AAGGGACTA..............................................	21	8	0.13	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................GGTTTCG-AAGGGACTTGATTGG........................................	22	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................TTTCG-AAGGGACTTGATTGGG.......................................	21	8	0.13	1	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................................TAGTTGGTTTCG-AAGGGACTTGA............................................	23	8	0.13	1	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................................TTGGTTTCG-AAGGGACTTGATTGGG.......................................	25	8	0.13	1	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................TCG-AAGGGACTTGATTGGGACA-------GAA..........................	25	8	0.13	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................GTTTCG-AAGGGACTTGATTGGGAC.....................................	24	8	0.13	1	0	0	0	0	0	0	1	0	0	0
.....................................................................................................................................................................................................................TTTCG-AAGGGACTTGATTGGGA......................................	22	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TAGTTGGTTTCG-AAGGGACTTGAT...........................................	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................TCG-AAGGGACTTGATTGGGACA-------GA...........................	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TGGTTTCG-AAGGGACTTGATTGGGAC.....................................	26	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................TGGTTTCG-AAGGGACTTGATTG.........................................	22	8	0.13	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................CG-AAGGGACTTGATTGGG.......................................	18	8	0.13	1	0	0	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................TCG-AAGGGACTTGATTGGGAC.....................................	21	8	0.13	1	0	0	0	0	0	0	0	0	0	1
..................................................................................................................................................................................................................TGGTTTCG-AAGGGACTTGATTGGGACA-------.............................	27	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................G-AAGGGACTTGATTGGGAC.....................................	19	8	0.13	1	0	0	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------.............................	18	9	0.11	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................ACTTGATTGGGACA-------GAATGAA......................	21	9	0.11	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATGT.......................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATCC.......................	24	9	0.11	1	0	0	0	0	0	0	0	0	1	0
.............................................................................................................................................................................................................................GGGACTTGATTGGGACA-------G............................	18	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................GACTTGATTGGGACA-------GAAT.........................	19	9	0.11	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATGAAAAT...................	28	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................GGGACTTGATTGGGACA-------GAAAA........................	22	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................GGACTTGATTGGGACA-------GAAT.........................	20	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................TTGATTGGGACA-------GAATGAAA.....................	20	9	0.11	1	0	0	0	0	0	0	1	0	0	0
.............................................................................................................................................................................................................................GGGACTTGATTGGGACA-------GA...........................	19	9	0.11	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GT...........................	20	9	0.11	1	0	0	0	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................GGACTTGATTGGGACA-------GA...........................	18	9	0.11	1	0	1	0	0	0	0	0	0	0	0

droPer2

TG------------------------------------------------------------GCAGACTTTCATCCCAATGAAGCTTTTCTTTCCACAGCTGCTGTAGAAATATTTTTGCTTTAGTAATAACTGGCCCTATAAGTCCGAGTGGATCATAAAATCGTGCAATAGTTG------ACAATACAA---------CTCGCTTAGTTGGTTTCG-AAGGGACTTGATTGGGACA-------GAATGAAAATAATAGCTTATCCGAAGTGG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATGA.......................	24	20	0.10	2	0	2	0	0	0	0
.............................................................................................................................................................................................................................GGGACTTGATTGGGACA-------GAATGA.......................	23	20	0.10	2	0	2	0	0	0	0
............................................................................................................................................................................................................................AGGGACTTGATTGGGACA-------GAATGAAAA....................	27	20	0.10	2	0	0	0	0	0	2
...............................................................................................................................................................................................................................GACTTGATTGGGACA-------GAATGAAA.....................	23	20	0.10	2	2	0	0	0	0	0
......................................................................................................................................................................................ACAATACAA---------CTCGCTTAGTTGGT............................................................	23	20	0.05	1	0	1	0	0	0	0
......................................................................................................................................................TGGATCATAAAATCGTGCAATAGTTG------............................................................................................	26	20	0.05	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................G-AAGGGACTTGATTGGGACA-------GAAT.........................	24	20	0.05	1	0	0	0	0	0	1
.......................................................................................TTCTTTCCACAGCTGCTGTAG......................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................GGGACTTGATTGGGACA-------GAATGAG......................	24	20	0.05	1	0	1	0	0	0	0
................................................................................................................................................................................................................GTTGGTTTCG-AAGGGACTTGA............................................	21	20	0.05	1	0	0	0	0	0	1

droVir3

----------------------------------------------------------------------------------AGCTTCTCCTTCCAGATCTGCTGCATAAAGATTTTAGCCTTGGCAATTACCAGCCCTATGAGTCCAAGCGGGTCATACAAGCGAGCTATAGTCG------ATAGC---------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.....................................................................................................GCTGCATAAAGATTTTAGCCTTG......................................................................................................................................................	23	20	3.00	60	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	54	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CCAGATCTGCTGCATAAAGATTTTAGCC.........................................................................................................................................................	28	20	1.70	34	0	0	23	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CCAGATCTGCTGCATAAAGATTTTAGC..........................................................................................................................................................	27	20	1.25	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0	0	1	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CCAGATCTGCTGCATAAAGATTT..............................................................................................................................................................	23	20	1.00	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CCAGATCTGCTGCATAAAGATTTTA............................................................................................................................................................	25	20	0.90	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	5	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTGGCAAT.................................................................................................................................................	28	20	0.85	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0	0	1	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CCAGATCTGCTGCATAAAGATTTTAGCCT........................................................................................................................................................	29	20	0.85	17	0	0	12	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTGGC....................................................................................................................................................	25	20	0.65	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CCAGATCTGCTGCATAAAGATTTT.............................................................................................................................................................	24	20	0.50	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTT.......................................................................................................................................................	22	20	0.40	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TACCAGCCCTATGAGTCCAAGCGGGT.......................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................TCCAGATCTGCTGCATAAAGATTT..............................................................................................................................................................	24	20	0.30	6	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTGG.....................................................................................................................................................	24	20	0.25	5	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTGT.....................................................................................................................................................	24	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTGGCAA..................................................................................................................................................	27	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................TCCAGATCTGCTGCATAAAGATTTTAGC..........................................................................................................................................................	28	20	0.20	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CCAGATCTGCTGCATAAAGATTTTT............................................................................................................................................................	25	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................TTCCAGATCTGCTGCATAAAGATTT..............................................................................................................................................................	25	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................TTCCAGATCTGCTGCATAAAGATTTTT............................................................................................................................................................	27	20	0.10	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................TCCTTCCAGATCTGCTGCATAAAG..................................................................................................................................................................	24	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTT......................................................................................................................................................	23	20	0.10	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTTT.....................................................................................................................................................	24	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCT........................................................................................................................................................	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTGGCAT..................................................................................................................................................	27	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CCAGATCTGCTGCATAAAGATTTTCC...........................................................................................................................................................	26	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................TTCCAGATCTGCTGCATAAAG..................................................................................................................................................................	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................TTCTCCTTCCAGATCTGCTGCATAAAGAT................................................................................................................................................................	29	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................TATGAGTCCAAGCGGGTCATA...................................................................................................................	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................TGCTGCATAAAGATTTTAGCCTT.......................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTAT.....................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................TCCAGATCTGCTGCATAAAGATT...............................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................TGCTGCATAAAGATTTTAGCCTTGG.....................................................................................................................................................	25	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................CAGATCTGCTGCATAAAGATTTTAGCC.........................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
............................................................................................TCCAGATCTGCTGCATAAAGATTTTA............................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTGGCAATT................................................................................................................................................	29	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CCAGATCTGCTGCATAAAGATTTTGT...........................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CCAGATCTGCTGCATAAAGATTTTAG...........................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................CTGCATAAAGATTTTAGCCTTGGCAAT.................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CCAGATCTGCTGCATAAAGATTC..............................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAGCGGGTCATACAAGCGAGCTAA.......................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AGCGGGTCATACAAGCGAGC..........................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................TCCTTCCAGATCTGCTGCATAAAGATTT..............................................................................................................................................................	28	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTGGCAC..................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................TGCTGCATAAAGATTTTAGCCTTGGCA...................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................ATCTGCTGCATAAAGATTTTAGCCTTA......................................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................ATCTGCTGCATAAAGATTTTAGCC.........................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CCAGATCTGCTGCATAAAGATA...............................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTGGT....................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTGGCTT..................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................TCCAAGCGGGTCATACAAGCG.............................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................CTTCCAGATCTGCTGCATAAAGATTTTC............................................................................................................................................................	28	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTGTT....................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTTTT....................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GATCTGCTGCATAAAGATTT..............................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................GATCTGCTGCATAAAGATTTTAGCCTT.......................................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................GCTGCATAAAGATTTTAGCCTTGTAT...................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CCAGATCTGCTGCATAAAGATT...............................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................TCCAGATCTGCTGCATAAAGA.................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TCTCCTTCCAGATCTGCTGCAT......................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

----------------------------------------------------------------------------------AGTTTATACCTCCAGAGTTGTTGCAAGAAAATTTTAGCCTTCGTTATTACTGGGCCGACCAGGCCGAGGGGATCATAAAACCGAGCAATAGACG------AGAGAACAG---------AGCGCCTGGAGGGCTTAG-AGG-------CTGAATTCAGGGCTAGATATGAGAAAAGAAGTTGATCAGATGCCG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
..........................................................................................................................................................................TAGACG------AGAGAACAG---------AGCGCCTGGAG...............................................................	26	20	22.90	458	457	1	0	0	0	0
.......................................................................................................................................................................CAATAGACG------AGAGAACAG---------AGCGCC....................................................................	24	20	4.20	84	0	0	0	0	84	0
..........................................................................................................................................................................TAGACG------AGAGAACAG---------AGCGCCTGGAGGG.............................................................	28	20	1.65	33	32	0	0	0	0	1
.......................................................................................................................................................................CAATAGACG------AGAGAACAG---------AGCGCCT...................................................................	25	20	1.10	22	0	0	0	0	22	0
...........................................................................................................................................................................AGACG------AGAGAACAG---------AGCGCCTGGA................................................................	24	20	0.80	16	16	0	0	0	0	0
.......................................................................................................................................................................................................................................................ATGAGAAAAGAAGTTGATCAGATG...	24	20	0.70	14	14	0	0	0	0	0
.......................................................................................................................................................................CAATAGACG------AGAGAACAG---------AGCGCCTG..................................................................	26	20	0.45	9	9	0	0	0	0	0
....................................................................................................................................TGGGCCGACCAGGCCGAGGGGATCA.....................................................................................................................	25	20	0.35	7	7	0	0	0	0	0
.......................................................................................................TGCAAGAAAATTTTAGCCTTCGTTA..................................................................................................................................................	25	13	0.31	4	4	0	0	0	0	0
.......................................................................................................................................................................CAATAGACG------AGAGAACAG---------AGC.......................................................................	21	20	0.30	6	0	0	0	0	6	0
....................................................................................................................................TGGGCCGACCAGGCCGAGGGGATC......................................................................................................................	24	20	0.30	6	6	0	0	0	0	0
..........................................................................................................................................................................TAGACG------AGAGAACAG---------AGCGCCTGGAA...............................................................	26	20	0.25	5	2	0	0	0	3	0
..........................................................................................................................................................................TAGACG------AGAGAACAG---------AGCGCCTGGAC...............................................................	26	20	0.25	5	0	0	0	0	5	0
.......................................................................................................TGCAAGAAAATTTTAGCCTTCGTTAT.................................................................................................................................................	26	13	0.15	2	2	0	0	0	0	0
......................................................................................................................................................................................................................................................TATGAGAAAAGAAGTTGATCAGATGC..	26	20	0.15	3	0	0	0	0	3	0
......................................................................................................................................................................................................................TTAG-AGG-------CTGAATTCAGGG.................................	19	20	0.15	3	3	0	0	0	0	0
..........................................................................................................................................................................TAGACG------AGAGAACAG---------AGC.......................................................................	18	20	0.15	3	3	0	0	0	0	0
............................................................................................................................................................................GACG------AGAGAACAG---------AGCGCCTGGAGGG.............................................................	26	20	0.15	3	0	0	0	0	3	0
....................................................................................................................................................................................................................................................GATATGAGAAAAGAAGTTGATCAGATGC..	28	20	0.15	3	0	0	0	0	3	0
..........................................................................................................................................................................TAGACG------AGAGAACAG---------AGCGCCTG..................................................................	23	20	0.15	3	0	0	0	0	0	3
......................................................................................................................................................................................................................TTAG-AGG-------CTGAATTCAGGGCTAGATA..........................	26	20	0.10	2	2	0	0	0	0	0
...........................................................................................................................................................................................................................AGG-------CTGAATTCAGGGCTA..............................	18	20	0.10	2	2	0	0	0	0	0
.................................................................................................................................TACTGGGCCGACCAGGCCGAGGGG.........................................................................................................................	24	20	0.10	2	2	0	0	0	0	0
.....................................................................................................GTTGCAAGAAAATTTTAGCCTTCGTTA..................................................................................................................................................	27	13	0.08	1	1	0	0	0	0	0
...........................................................................................................AGAAAATTTTAGCCTTCGTT...................................................................................................................................................	20	16	0.06	1	1	0	0	0	0	0
.......................................................................................................................................................................................GAGAACAG---------AGCGCCTGGAGGGC............................................................	22	20	0.05	1	0	0	0	0	1	0
.....................................................................................................................................................................................................................................................ATATGAGAAAAGAAGTTGATCAGATC...	26	20	0.05	1	1	0	0	0	0	0
........................................................................................................................................................................AATAGACG------AGAGAACAG---------AGCGCCTGG.................................................................	26	20	0.05	1	0	0	0	0	1	0
...........................................................................................................................................................................AGACG------AGAGAACAG---------AGCGCCTGGAGGG.............................................................	27	20	0.05	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................AGAAGTTGATCAGATGCC.	18	20	0.05	1	0	0	0	0	1	0
......................................................................................................................................................................................................................TTAG-AGG-------CTGAATTCAGGGCTAG.............................	23	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................TACTGGGCCGACCAGGCCGAGG...........................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................GATATGAGAAAAGAAGTT............	18	20	0.05	1	1	0	0	0	0	0
...............................................................................................................................................................................G------AGAGAACAG---------AGCGCCTGGAGGGC............................................................	24	20	0.05	1	0	0	0	0	1	0
...........................................................................................................................................................................AGACG------AGAGAACAG---------AGCGCCT...................................................................	21	20	0.05	1	0	0	0	1	0	0
..........................................................................................................................................................................TAGACG------AGAGAACAG---------AGCGCCTGGC................................................................	25	20	0.05	1	1	0	0	0	0	0
........................................................................................................................................................................AATAGACG------AGAGAACAG---------AGCGCCT...................................................................	24	20	0.05	1	0	0	0	0	1	0
..........................................................................................................................................................................................................................................TTCAGGGCTAGATATGAGAAAAGAAG..............	26	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................TGGGCCGACCAGGCCGAGGGGATCATAA..................................................................................................................	28	20	0.05	1	0	0	0	0	0	1
...........................................................................................................................................................................................................GCCTGGAGGGCTTAG-AGG-------CTG..........................................	21	20	0.05	1	0	0	0	0	0	1
................................................................................................................................................................................................................GAGGGCTTAG-AGG-------CTGAATTCAGGGC................................	26	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................AAAGAAGTTGATCAGATGCCG	21	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................................................................TAGACG------AGAGAACAG---------AGCGCCTGA.................................................................	24	20	0.05	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................TGAGAAAAGAAGTTGATCAG......	20	20	0.05	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................CAGGGCTAGATATGAGAAAAG.................	21	20	0.05	1	0	0	0	1	0	0
....................................................................................................................................................................................................................................................GATATGAGAAAAGAAGTTGATCAGAT....	26	20	0.05	1	0	0	0	0	1	0
........................................................................................................................................................................AATAGACG------AGAGAACAG---------AGCGCCG...................................................................	24	20	0.05	1	0	0	0	0	1	0
....................................................................................................................................................................................................................................................GATATGAGAAAAGAAGTTGATCAGATG...	27	20	0.05	1	0	1	0	0	0	0
..........................................................................................................................................................................TAGACG------AGAGAACAG---------AGCGCCC...................................................................	22	20	0.05	1	1	0	0	0	0	0
................................................................................................................................TTACTGGGCCGACCAGGCCGAGG...........................................................................................................................	23	20	0.05	1	1	0	0	0	0	0

droGri2

-------------------------------------------------------------------------------------TTTGCCTTCCAGAGTTGCTGCAGGAATATTTTGCACCTAGCAATTGCAGGTCCAATAAGACCAAGAGGATCATAGATACACGCAATCGTGT------ACAAGATGG---------ATCGCTTGGAGAGTTTTG-AAT-------TTGGGCGAACAGGTGACAACAAAAACAAAAGATTATCCGAAACTG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_17144

2l:22817370-22817519 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-4.5	-4.3	-4.2