ID:

dsi_170

 Coordinate:

x:18334933-18335027 +

 Confidence:

Known Ortholog

 Class:

Testes-restricted

 Genomic Locale:

5pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.2 -25.0 -24.8

Flybase annnotation

utr5 [utr5_plus_15687]

No Repeatable elements found

Sense Strand Reads

ACAGGGTATACGAACCAATTCAAATATTCTTTCAGATTATATGACTTTAACGTATACTTTTCCGGGTTGGTGGTTGAACTTCGATTTTAAGCATTTAAATAAGATAAATCTGTTCATTCTTCGACCCAAAAAGTTCACGTGAAGAAGCAGCGAACATCAAATGTGTGAATGTAAACTCAATTGTCACTGGTCGTG

**********************************************...((((..((((((..(((((((.((.(((((...(((((..................))))).))))).)).))))))).))))))..))))....*************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001

Testis

 M024

male body		 SRR902009

testis

 M023

head

 O002

Head

 SRR553485

Chicharo_3 day-old ovaries

 SRR553488

RT_0-2 hours eggs

 SRR553487

NRT_0-2 hours eggs

 M025

embryo

 SRR553486

Makindu_3 day-old ovaries

 M053

female body

 SRR618934

dsim w501 ovaries
............................................................................................................TCTGTTCATTCTTCGACCCAA.................................................................. 21 0 1 910.00 910 678 200 12 7 8 0 2 1 0 2 0 0
............................................................................................................TCTGTTCATTCTTCGACCCAAA................................................................. 22 0 1 484.00 484 182 272 17 3 1 4 3 1 1 0 0 0
...........................................................................................................ATCTGTTCATTCTTCGACCCA................................................................... 21 0 1 419.00 419 281 15 117 0 4 0 0 0 0 0 1 1
...........................................................................................................ATCTGTTCATTCTTCGACCCAA.................................................................. 22 0 1 360.00 360 258 7 87 0 6 0 1 1 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACCC.................................................................... 19 0 1 223.00 223 208 9 0 1 5 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACCCA................................................................... 20 0 1 216.00 216 132 66 0 17 1 0 0 0 0 0 0 0
..........................................................................................................AATCTGTTCATTCTTCGACCCA................................................................... 22 0 1 140.00 140 45 12 80 0 0 1 0 1 0 1 0 0
...........................................................................................................ATCTGTTCATTCTTCGACCCAAA................................................................. 23 0 1 128.00 128 88 5 33 0 1 1 0 0 0 0 0 0
...........................................................................................................ATCTGTTCATTCTTCGACCC.................................................................... 20 0 1 111.00 111 102 3 3 0 3 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACC..................................................................... 18 0 1 44.00 44 35 6 0 3 0 0 0 0 0 0 0 0
...........................................................................................................ATCTGTTCATTCTTCGACC..................................................................... 19 0 1 33.00 33 30 2 0 1 0 0 0 0 0 0 0 0
..........................................................................................................AATCTGTTCATTCTTCGACCC.................................................................... 21 0 1 28.00 28 12 11 4 1 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACCCAAAA................................................................ 23 0 1 27.00 27 14 12 1 0 0 0 0 0 0 0 0 0
..........................................................................................................AATCTGTTCATTCTTCGACCCAA.................................................................. 23 0 1 11.00 11 4 2 5 0 0 0 0 0 0 0 0 0
..........................................................................................................AATCTGTTCATTCTTCGACC..................................................................... 20 0 1 10.00 10 6 1 3 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCTGTTCATTCTTCGAC...................................................................... 18 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0 0 0
.............................................................CCGGGTTGGTGGTTGAACTTCGATTT............................................................................................................ 26 0 1 7.00 7 6 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................CTGTTCATTCTTCGACCCAA.................................................................. 20 0 1 7.00 7 6 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCTGTTCATTCTTCGACCCAT.................................................................. 22 1 1 7.00 7 0 0 7 0 0 0 0 0 0 0 0 0
.............................................................CCGGGTTGGTGGTTGAACTTCGAT.............................................................................................................. 24 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................CTGTTCATTCTTCGACCCA................................................................... 19 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................AATCTGTTCATTCTTCGACCCT................................................................... 22 1 1 5.00 5 0 2 1 0 0 0 0 0 2 0 0 0
..........................................................................................................AATCTGTTCATTCTTCGAC...................................................................... 19 0 1 5.00 5 2 2 1 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCTGTTCATTCTTCGACCCAC.................................................................. 22 1 1 5.00 5 0 0 5 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACCCAG.................................................................. 21 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0
.............................................................CCGGGTTGGTGGTTGAACTTC................................................................................................................. 21 0 1 4.00 4 3 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCTGTTCATTCTTCGACCCAAAA................................................................ 24 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACCCG................................................................... 20 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0
.............................................................CCGGGTTGGTGGTTGAACTTCG................................................................................................................ 22 0 1 3.00 3 1 0 1 0 0 1 0 0 0 0 0 0
.......................................................................................TAAGCATTTAAATAAGATAA........................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACCCAAT................................................................. 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................CTGTTCATTCTTCGACCCAAA................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACCCACC................................................................. 22 2 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................AATCTGTTCATTCTTCGA....................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACCCT................................................................... 20 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.............................................................CCGGGTTGGTGGTTGAACTTCGATT............................................................................................................. 25 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................CTGTTCATTCTTCGACCC.................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TTCATTCTTCGACCCAAA................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACCCAAAGA............................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................AGTCTGTTCATTCTTCGACCC.................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................GGGTTGGTGGTTGAACTTCGATT............................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................AATCTGTTCATTCTTCGATCCA................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCTGTTCATTCTTCGATTCA................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCTGTTCATTCTTCGACCCT................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................CCGGGTTGGTGGTTGAAC.................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCTGTTCATTCTTCGACCAAA.................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCCGTTCATTCTTCGACCCAAA................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................CTTGTTCATTCTTCGACCCAA.................................................................. 21 2 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGATCATTCTTCGACCCAAA................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................TATGTTCATTCTTCGACCCAAA................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................AATCTGTTCATTCTTCGACTC.................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................TCCGGGTTGGTGGTTGAACTTCGAT.............................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCTGTTCATTCTTCAACCCA................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCGGTTCATTCTTCGACCCA................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................AATCTGTTCATTCTTCGATTCA................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................TCTTTTCATTCTTCGACCCAAA................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGAC...................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................TTTGTTCATTCTTCGACCCAA.................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCTACCCAAA................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCTGTTAATTCTTCGACCCA................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACCCAAG................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACCCAC.................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................AATCTGTTAATTCTTCGACCCA................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................AATCTGTTCATTCTTCGACCCAT.................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................GTTCATTCTTCGACCCAA.................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCCGTTCATTCTTCGACCCA................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTGATTCTTCGACCCAAA................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCTGTTCATTCTCCGACCCAA.................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTATTCGACCC.................................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCCACCCAAA................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGGCCCAAA................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCCACCCA................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................AAATTGTTCATTCTTCGACCCA................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................AATCTGTTCATTCTTCGACCCAAA................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACCCCAA................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCTGTTCATTCTTCGACCCCA.................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................TCTGTTCATTCTTCGACCCATTT................................................................ 23 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................GGTTGAACTTTGATGCTAAGC....................................................................................................... 21 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ATTCTTCAACCCAAGAAG.............................................................. 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TGTCCCATATGCTTGGTTAAGTTTATAAGAAAGTCTAATATACTGAAATTGCATATGAAAAGGCCCAACCACCAACTTGAAGCTAAAATTCGTAAATTTATTCTATTTAGACAAGTAAGAAGCTGGGTTTTTCAAGTGCACTTCTTCGTCGCTTGTAGTTTACACACTTACATTTGAGTTAACAGTGACCAGCAC

***************************************************...((((..((((((..(((((((.((.(((((...(((((..................))))).))))).)).))))))).))))))..))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488

RT_0-2 hours eggs

 SRR553487

NRT_0-2 hours eggs

 SRR553486

Makindu_3 day-old ovaries

 SRR553485

Chicharo_3 day-old ovaries

 SRR618934

dsim w501 ovaries
..........................AAGAAAGTCTAATATACTGAAATTGCAT............................................................................................................................................. 28 0 1 2.00 2 0 2 0 0 0
............TTGGTTAAGCTTATAAGAAAGTCT............................................................................................................................................................... 24 1 1 1.00 1 0 0 1 0 0
.........................................................AAAAGGCCCAACCACCAACTTGAAGCT............................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...........................AGAAAGTCTAATATACTGAAATTGC............................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
......................................................................................................CTATTTAGACAAGTAAGAAGCTGGGT................................................................... 26 0 1 1.00 1 1 0 0 0 0
...........................AGAAAGTCTAATATACTGAAATTGCAT............................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
......................TTATAAGAAAGTCTAATATACTGAAAT.................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.........................................................................................TCGTAAATTTATTCTATTTAGACAAGT............................................................................... 27 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................CAAGTACAGTTCTTAGTCGC........................................... 20 3 4 0.75 3 0 0 0 3 0
...............................................................................................ATTTTTTCTATTAAGACAGGT............................................................................... 21 3 9 0.11 1 1 0 0 0 0
..........................................................................................................................AGGGGTTTTTCAAGTGCA....................................................... 18 2 13 0.08 1 0 0 0 1 0
....................GTTTATAAGAATGTC................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 x:18334883-18335077 + dsi_170 confident ACAGGGTATACG--------AACCAA--TTCAAATATTCTTTCAGATTAT--ATGACT----------------------------------------------------------------------TT---AACGTATACTTTTCCGGGTTGGTGGTTGAACTTCGATTTTAAG-CA--TTT----------AAATAAGA-TAAATCTGTTCATTCTTCGACCCAAAAAGTTCAC-GTGAAGAAGCAGCGAAC--------------------------------------------ATCAAATGTGTG------------------AA-------------------T------------------G--------TAAACT-C--AATTGTCACTGGTCGTG
droSec2 scaffold_8:1727924-1728129 + dse_159 candidate-rescued ACAGGGTATACGTTTAAACAAACCAA--TTCGAATATTCTTTCAGATTAT--ATGACT----------------------------------------------------------------------TC---AACGTATACTTTTCGGGGTTGGTGGTTGAACTTCGATTTTAGG-TA--TTT----------AAATAAGA-TAAATCTGTTCATTCTTCGACCCAAAAAGTTCAC-GTGAAGAAGCAGCGAGC--------------------------------------------ATCAAATGAGTG------------------AA-------------------T----C-----------AGG--------TAAACT-C--GATTGTCACTGGTCGTG
dm3 chrX:19445471-19445728 + dme-mir-973 Known_mirbase ACAGGGTATACGTTTGAACAAACCAA--TTCGAATATTCTTTGTGATTTT--GCG-CT------------------------AAACATCTGCTTT-----------TAACATCAGAATATACTTCACTTTACCGTCGTCGACTTTTCGTGGTTGGTGGTTGAACTTCGATTTTAAG-TA--TTT----------AAATAAAATGAAATCTGTTCATTCTCCGACACAAGAAGTTCAC-GCAAAGGAGCTGCAGCTGCGA--------------------------------------ACATCAAATGCGTG------------------AA-------------------T----CCCAGGTC---CAGG--------TAAGCT-C--AATTGTCACCGGTCATG
droEre2 scaffold_4690:9682208-9682469 + der_78 confident ACAGGGTACCAGATTCAACAAACCAA--AGCGAGG--------------C--CTAACTAATTTATGTGTAATATTTTACACAG------TACTTTCCTTAATCTATATAAATCAGACTATAC--CATTTT---AACGTCGACTTTTCGTGGTTGGTGGCTGAACTTAGATTTTGAG-TA--TTC----------AAATAAAA-TAAATCTGTTCATTCCTCGACACAAGAAGTTGAC-GTGCAGGAGCGGCAAAC--------------------------------------------ATGAATCGAGTG------------------AA-------------------T----C-----------AGGAAAACAGAACCACT-A--ACTCAGCACTGGGCATG
droEug1 scf7180000409109:6796-7012 - ACATAAAAA------------ACCAAAAGTCAA--ACTTTTATAAATCATTAAAGATT----------------------------------------------------------------------CC---AACGACGACTTCTCGTGTTTGGTGACTGAACTTGGATTTTGAA-TA--TTT----------AAATAAAA-TAAATCTGTTCAATCCTCAACACGAGAAGTCGAC-GTAAATGACCAGCAAAC--------------------------------------------ATAAATAAGGTGATAGTGCTTA--------AA-------------------A----CTAAAACATAATAAT--------TAAGAT-T--AAGAATAATTGGATATG
droBia1 scf7180000302069:1157414-1157618 - CCGCG-TTTACAT--------AC-----TACGCAGATCCTACGAATGAAT--TTGATG----------------------------------------------------------------------TT---AACGCCGACTTTAGGTGTTTGGTGGCTGAACTTGGATTTTTAA-CA--GTT----------GAATGTAT-TAAATCTGTTCATTCCTCAACACAAAAAGTTGAC-GTTAAGGCCCAGCATAAAAAACAGAG-----TGATGAGACAAGGCAAT-----------------------------------------------------------------------------------A--------CAAATTTAGAATTTAGAAAAGGTCATC
droTak1 scf7180000415169:850687-850874 - ACTAAGCATAT---TGAGAA------------AATATTATTAAAG----T--TTAATT----------------------------------------------------------------------TT---AACGTCGACTTTTCGTGTTTGGGGGCTGAACTCTGATTTTTAA-TA--ATT----------GAATTAAG-TAAATCTGTTCATTCCTCGACACAAGAAGTTGGC-GTAAAGTAACAGCGCAT--------------------------------------------ACAAATTGAGTG------------------AT-------------------AATA---------------------------ATTTGGAACTTCGAATAGGTCATC
droEle1 scf7180000490751:1106866-1107019 + T------------------------------------------------------------------------------------------------------------------------------------GACATCGACTTTTTGTGTTTGGCGGATGAACTTAGATTTTTCT-TA--TTT----------GTA-AAAA-CAAATCTGTTCATTCCTCGACGCAAAAAGTTGATTGTTAAAAACCAGCACAC--------------------------------------------TCAAATGGAGCA------------------AA-------------------AAAA--------------------AATACGGGCT-G--ACTCGGAAAAGGTCATT
droRho1 scf7180000761121:198679-198868 - TATCTAAAT--------------AAA--TTCAA-AATGCTTAA---TAATTCAACATT----------------------------------------------------------------------AA---AACATCGACTTCTCGTGTTTGGCGTCTGAACTCAGATTCTTAA-CA--GTT----------GTGTTAAATAAAATCTGTTCATTCCTCGACACAAGAAGTTGAC-GTTAAG-ACCAGCATAC--------------------------------------------TCAACTGAAGAG------------------AA-------------------AACA---------------A--------CGAGCT-T--TCTCGAAATAGGTCATC
droFic1 scf7180000454073:1723908-1724095 + AT---------------------CAG--TTTAAACAATTTGGAAAAATAC--AAAACG----------------------------------------------------------------------GT---GACATTGACATCTCGTGTTTGGCGAATGAGCTCGGATTTTTGT-AGTATTT----------GAATAAGA-TAAATCTGTTCATTCCTCGACACAAGAAGTTGAA-GTTGATAATCAACTAAA---ACAAAG-----TGCTAAGGATAC------------------GC--------------------------------------------------------------------------------AATTAAAAACAAAAAAGGAGCATT
droKik1 scf7180000302517:1176220-1176378 + A--------------------------------------------------------------------------------------------------------------------------------------------CTTTTCGTGCTTGGCGATTGAAGGTGGATTTGTGA-TT--TTT----------AAGC-AAT-TAAATCTGTTCAATCGTCAACACTAAAAGTTGAT-GTTATTTAGCTTCGAAC--------------------------------------------CCCAAGGAT-----CCTGCCTAGAACGGTGAG-------------------TATAGC-----------CGG--------GACATC-T--CCGCCAAGCTGGTCTTT
droAna3 scaffold_13417:2478569-2478743 - dan_104 confident A--------------------------------------------------------------------------------------------------------------------------------------------CTCCTCGTGTTTGGCGATTGAACCTGGATTTTTAA-TT--TTC----------GAGTACGA-GAAATCTGTTCATTCCTCGACACTAGTAGTTGGC-GCGACA-CTCAGCGCACCAAAC----ATGAACCGCGGCTCAAATCAATCCAATC---------------------------------------CGAATCCAATCGCGGTTGCAAT----------------------------CCT-G--GCTTGGGGTAGGTCATC
droBip1 scf7180000395874:49617-49787 - A--------------------------------------------------------------------------------------------------------------------------------------------CTTCTCGTGTTAGGCGATTGAACCTGGATTT-AAA-TT--TTC----------GAGTACGA-GAAATCTGTTCAATCCTCGACACTAGCAGTTGGC-GCGACCGA-CTGCGCATAAAA-AC--ATTATTCGCGCCTCATATC--------C---------------------------------------CGAA-CCAATCGCGGTTGCAATC---------------C--------TTGGGT-G--GATTGGGGTAGGTCATC
droWil2 scf2_1100000004909:7946469-7946631 + TC-----------------------------------------------------------------------------------------------------------------------------------GACATGGCCTTTTCGTGTTTGGTGATTGAACTTGGATTTTGTTCTA--TATACATATATAAAAAT-ATG-TAAATCTGTTCATTCCTCGACACTAGAAGTTCAT-GTCAATAA-CTTCATT---------------------------TC--------CTGCACACAAGAA--AAGCG------------------AA-------------------T-----------------------------CATT-C-ATTTTTCCAATGGCCATA
droVir3 scaffold_13042:918331-918433 - dvi-mir-973 Known_mirbase AC--------------------------------------------------------------------------------------------------------------------------------------ATTCACTTTTCGTGTTCGATGTTTGAACTTGGATTTTTTT-TA--TAT---------------ACA-CAAATCTGTTCATTCCTCGACACTAGAAGTTTGC-GTCAATAAGCTGCCAAT--------------------------------------------AT--------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6328:2909104-2909196 - dmo_112 confident A--------------------------------------------------------------------------------------------------------------------------------------------CTTTTCGTGTTCGATGTTTGAACTTGGATTTTTAA-AA--TAT----------GA---AAA-GAAATCTGTTCATTCCTCGACACTAAGAGTTTAG-GTCTATAAACAAC----------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACAGGGTATACG--------AACCAA--TTCAAATATTCTTTCAGATTAT--ATGACT----------------------------------------------------------------------TT---AACGTATACTTTTCCGGGTTGGTGGTTGAACTTCGATTTTAAG-CA--TTT----------AAATAAGA-TAAATCTGTTCATTCTTCGACCCAAAAAGTTCAC-GTGAAGAAGCAGCGAAC--------------------------------------------ATCAAATGTGTG------------------AA-------------------T------------------G--------TAAACT-C--AATTGTCACTGGTCGTGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCAA.................................................................................................................................................................................211910.009107200006788021200012000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCAAA................................................................................................................................................................................221484.004843272101821401300017000
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGACCCA..................................................................................................................................................................................211419.004190150128140000100117000
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAA.................................................................................................................................................................................221360.0036007002586001100087000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCC...................................................................................................................................................................................191223.002231900208500000000000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCA..................................................................................................................................................................................201216.00216176600132100000000000
.............................................................................................................................................................................................................AATCTGTTCATTCTTCGACCCA..................................................................................................................................................................................221140.0014001200450111000080000
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAAA................................................................................................................................................................................231128.001280500881100000033000
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGACCC...................................................................................................................................................................................201111.001110300102300000003000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACC....................................................................................................................................................................................18144.0044360035000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGACC....................................................................................................................................................................................19133.0033120030000000000000
.............................................................................................................................................................................................................AATCTGTTCATTCTTCGACCC...................................................................................................................................................................................21128.00281110012000000004000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCAAAA...............................................................................................................................................................................23127.00270120014000000001000
.............................................................................................................................................................................................................AATCTGTTCATTCTTCGACCCAA.................................................................................................................................................................................23111.001102004000000005000
.............................................................................................................................................................................................................AATCTGTTCATTCTTCGACC....................................................................................................................................................................................20110.001001006000000003000
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGAC.....................................................................................................................................................................................1819.00900009000000000000
..................................................................................................................................................CCGGGTTGGTGGTTGAACTTCGATTT.........................................................................................................................................................................................................................................2617.00700006000000001000
................................................................................................................................................................................................................CTGTTCATTCTTCGACCCAA.................................................................................................................................................................................2017.00701006000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAT.................................................................................................................................................................................2217.00700000000000007000
..................................................................................................................................................CCGGGTTGGTGGTTGAACTTCGAT...........................................................................................................................................................................................................................................2416.00600006000000000000
................................................................................................................................................................................................................CTGTTCATTCTTCGACCCA..................................................................................................................................................................................1916.00600006000000000000
.............................................................................................................................................................................................................AATCTGTTCATTCTTCGACCCT..................................................................................................................................................................................2215.00502200000000001000
.............................................................................................................................................................................................................AATCTGTTCATTCTTCGAC.....................................................................................................................................................................................1915.00502002000000001000
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAC.................................................................................................................................................................................2215.00500000000000005000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCAG.................................................................................................................................................................................2114.00404000000000000000
..................................................................................................................................................CCGGGTTGGTGGTTGAACTTC..............................................................................................................................................................................................................................................2114.00400003000000001000
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAAAA...............................................................................................................................................................................2414.00400004000000000000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCG..................................................................................................................................................................................2013.00303000000000000000
..................................................................................................................................................CCGGGTTGGTGGTTGAACTTCG.............................................................................................................................................................................................................................................2213.00300001010000001000
............................................................................................................................................................................TAAG-CA--TTT----------AAATAAGA-TAA.......................................................................................................................................................................................................2012.00200002000000000000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCAAT................................................................................................................................................................................2212.00202000000000000000
................................................................................................................................................................................................................CTGTTCATTCTTCGACCCAAA................................................................................................................................................................................2112.00200002000000000000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCACC................................................................................................................................................................................2212.00202000000000000000
.............................................................................................................................................................................................................AATCTGTTCATTCTTCGA......................................................................................................................................................................................1812.00200002000000000000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCT..................................................................................................................................................................................2012.00202000000000000000
..................................................................................................................................................CCGGGTTGGTGGTTGAACTTCGATT..........................................................................................................................................................................................................................................2512.00200001000000001000
................................................................................................................................................................................................................CTGTTCATTCTTCGACCC...................................................................................................................................................................................1812.00200002000000000000
...................................................................................................................................................................................................................TTCATTCTTCGACCCAAA................................................................................................................................................................................1811.00100001000000000000
....................................................................................................................................................GGGTTGGTGGTTGAACTTCGATT..........................................................................................................................................................................................................................................2311.00100001000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGACCCT..................................................................................................................................................................................2111.00101000000000000000
..................................................................................................................................................CCGGGTTGGTGGTTGAAC.................................................................................................................................................................................................................................................1811.00100001000000000000
.................................................................................................................................................TCCGGGTTGGTGGTTGAACTTCGAT...........................................................................................................................................................................................................................................2511.00100001000000000000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGAC.....................................................................................................................................................................................1711.00100000000000001000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCAAG................................................................................................................................................................................2211.00101000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCAC.................................................................................................................................................................................2111.00101000000000000000
.............................................................................................................................................................................................................AATCTGTTCATTCTTCGACCCAT.................................................................................................................................................................................2311.00100000000000001000
..................................................................................................................................................................................................................GTTCATTCTTCGACCCAA.................................................................................................................................................................................1811.00100001000000000000
.............................................................................................................................................................................................................AATCTGTTCATTCTTCGACCCAAA................................................................................................................................................................................2411.00100000000000001000
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCATTT...............................................................................................................................................................................2320.50101000000000000000
droSec2
ACAGGGTATACGTTTAAACAAACCAA--TTCGAATATTCTTTCAGATTAT--ATGACT----------------------------------------------------------------------TC---AACGTATACTTTTCGGGGTTGGTGGTTGAACTTCGATTTTAGG-TA--TTT----------AAATAAGA-TAAATCTGTTCATTCTTCGACCCAAAAAGTTCAC-GTGAAGAAGCAGCGAGC--------------------------------------------ATCAAATGAGTG------------------AA-------------------T----C-----------AGG--------TAAACT-C--GATTGTCACTGGTCGTGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGACCCA..................................................................................................................................................................................2116.0064110
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAA.................................................................................................................................................................................2216.0060312
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCAA.................................................................................................................................................................................2113.0030210
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAAA................................................................................................................................................................................2312.0021100
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCCAAA................................................................................................................................................................................2212.0021010
...............................................................................................................................................................................................................TCTGTTCATTCTTCGACCC...................................................................................................................................................................................1912.0022000
..............................................................................................................................................................................................................ATCTGTTCATTCTTCGACCCAC.................................................................................................................................................................................2211.0011000
...................................................................................................................................................GGGGTTGGTGGTTGAACTTCGA............................................................................................................................................................................................................................................2211.0010100
..................................................................................................................................................CGGGGTTGGTGGTTGAACTTCGATT..........................................................................................................................................................................................................................................2511.0010010
...................................................................................................................................................GGGGTTGGTGGTTGAACTTCG.............................................................................................................................................................................................................................................2111.0010100
...................................................................................................................................................................................................................TTCATTCTTCGACCCAAAAAGT............................................................................................................................................................................2211.0010100
dm3
ACAGGGTATACGTTTGAACAAACCAA--TTCGAATATTCTTTGTGATTTT--GCG-CT------------------------AAACATCTGCTTT-----------TAACATCAGAATATACTTCACTTTACCGTCGTCGACTTTTCGTGGTTGGTGGTTGAACTTCGATTTTAAG-TA--TTT----------AAATAAAATGAAATCTGTTCATTCTCCGACACAAGAAGTTCAC-GCAAAGGAGCTGCAGCTGCGA--------------------------------------ACATCAAATGCGTG------------------AA-------------------T----CCCAGGTC---CAGG--------TAAGCT-C--AATTGTCACCGGTCATGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGA............................................................................................................................................................................................................................................21126299.0026299000001000002000000000001200000000000000100000100000000000000000000000000000000000040000062020021204722137800284202611010000000000000100000000000000000000050000000000000000100003200000000000011500472000013304970000000000000000059100110100000000000000000200150020027101000000110593101000000000000900002000111030010041185104000403816733601070178131110014200568171230
....................................................................................................................................................TGGTTGGTGGTTGAACTTCG.............................................................................................................................................................................................................................................20110374.00103740000000000000000000000030200000000000000100000000000000000000000000000000000000000000000002003007000001000000000001000000000000000000000000000000000000000000000000000000000000000100000001840455000011403920000000000010000015110000000000000000000000000100600000100000090502100001020000000900112111019010000052012011000011306828201010670219721241541212941100
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGAT...........................................................................................................................................................................................................................................2216869.0068690000000000020000000000010000000000000001030010000010000000000000000000000000000000000000100200110024003001000022021000000000000000001000000000000000000003000000000000000000000000000000000000342140000023010800000000000000000220000002000000000000000000007004001010000000401720000000000000005000000001401000004018600020434288300010500002700000418331230
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGATT..........................................................................................................................................................................................................................................2314683.0046830000000000010000000000010000000000000000100000000000000000000000000000000000000000000000102001800100000000000100160105000000000000000000000000000000000000000000000000000000000100000000000003405900001607200000000000000000100000002000000000000000000003003001010000000307400000001000000010000000004010000020890000000273920001039010130000031526060
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGATTTT........................................................................................................................................................................................................................................2514653.0046530000000100012000000000000000000000000000000000000100000000000000000000000000000000101431010071110711191003002030140764301200000000000000000000000000000000000000000000000000010000000000000000000460800000908700000000000000000000012024230000000000000000005005011000000000116400000002000000060000000101000000030880001000298220000021000140000011000080
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGATTT.........................................................................................................................................................................................................................................2412079.00207900000000000100000010000000000000000000000000000000000000000000000000000000000000000400000000124001400020100002002100020000000000000000000000000000000000000000000000000000000000000000000000021042000020400000000000000000000000000300000000000000000000200100001000000000310000000000000001000000001200000002053000000012884000001701012100000520060
.............................................................................................................................................................................................................AATCTGTTCATTCTCCGACACA..................................................................................................................................................................................221280.0028000000100000000000000000130000000000000000101000000000000000000000000000000000000000000000001003003000100000000010000000000000000010000000000000000000020000000000000000001000300000200000006011000030700000020000000000010000024311100000000000000002002000000000000408500000001000000000000000102000000010000000000560000000000000000048020
..................................................................................................................................................CGTGGTTGGTGGTTGAACTTCGATT..........................................................................................................................................................................................................................................251277.00277000000001000000000000000000000000000000000000000000000000000000000000000000000000003000000000300000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000012370000002000000000023010
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGT............................................................................................................................................................................................................................................211234.002340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000204000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000001100000001060000002010201000098000
.................................................................................................................................TACCGTCGTCGACTTTTCG.................................................................................................................................................................................................................................................................191129.00129000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000003500000000000000010000000200000000000000001000621000001000000000019000
...............................................................................................................................................................................................................TCTGTTCATTCTCCGACACAAG................................................................................................................................................................................221110.0011000000000100100000000000500000000000000000000000000000000000000000000000000000000010020000000050030001010000000601020000000000000000000000000000000000000000000000000001000001010000000000050500003030000000000000000000000201101000000000000000000100000000000000000310000000000000000000000000000000000000000000018000000000000000007000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGAA...........................................................................................................................................................................................................................................22197.009700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000030000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000410000001000000000147000
.............................................................................................................................................................................................................AATCTGTTCATTCTCCGACA....................................................................................................................................................................................20190.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000010000000000000000000000000000000000000000000000000100000000000000360000000100000000000000000000000000000000000060000000000000000043000
...............................................................................................................................................................................................................TCTGTTCATTCTCCGACACAAGT...............................................................................................................................................................................23172.007200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100000000000000000000000000000000000000000000000000000000000000000000010190000000000000000000000000000000000000000000040000000000000000008000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGATTTTT.......................................................................................................................................................................................................................................26166.006600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010400000030000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000370000000000000000015010
................................................................................................................................TTACCGTCGTCGACTTTTCG.................................................................................................................................................................................................................................................................20165.00650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000001000000000000000055000000000000000001000
....................................................................................................................................................TGGTTGGTGGTTGAACTTC..............................................................................................................................................................................................................................................19154.005400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200000010000000000000000000000000000000000000000000000000000000000000000400000000000000000000001000000000000010000000170000001000000000022000
...............................................................................................................................................................................................................TCTGTTCATTCTCCGACACA..................................................................................................................................................................................20153.005300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000100000000000000000000000000000000100000000000000001000000000000000000060100000000000000000000000000000000000000000000000000000000000000000000000270000000000000000000000000000000000000000000030000000000000000011000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGC............................................................................................................................................................................................................................................21150.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010100000010000000000000000000000000000000000000000000000000000001000000000400000000000000000000000000000000000200000000170000000010001000019000
...............................................................................................................................................................................................................TCTGTTCATTCTCCGACACAA.................................................................................................................................................................................21147.00470000000000000000000000030000000000000000000000000000000000000000000000000000000000005000001001000000000000000010000010000000000000000000000000000000000000000000000000000000001000000000022010000103000000000000000000000000000000000000000000000010000110000000000015000000000000000000000000000000000100000000002000000000000000004000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGG............................................................................................................................................................................................................................................21137.003700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000200000000000000000000000000000000000100000000190000000000000000014000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGATTTTATC-....................................................................................................................................................................................................................................28136.003600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCTCCGACACA..................................................................................................................................................................................21127.00270000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000000000000000000000015000000000000000000000000000000000000000000003000000000000000006000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGATA..........................................................................................................................................................................................................................................23125.002500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000013000
...............................................................................................................................TTTACCGTCGTCGACTTTTCG.................................................................................................................................................................................................................................................................21122.00220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000019000000000000000000000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGATC..........................................................................................................................................................................................................................................23121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000011000
.............................................................................................................................................................................................................AATCTGTTCATTCTCCGACAC...................................................................................................................................................................................21118.0018000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000000000000000000005000000000000000000000000000000000000000000005000000000000000004000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCT.............................................................................................................................................................................................................................................20117.0017000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000300000002000000000010010004000
..............................................................................................................................................................................................................ATCTGTTCATTCTCCGACACAA.................................................................................................................................................................................22116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000200000010000000000000000000000000001000000000000000000000000000000000000006000000000000000000000000000000000000000000004000000000000000001000
...................................................................................................................................................GTGGTTGGTGGTTGAACTTCGATTT.........................................................................................................................................................................................................................................25115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015000000000000000000000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGATTA.........................................................................................................................................................................................................................................24113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000001000
.............................................................................................................................................................................................................AATCTGTTCATTCTCCGAC.....................................................................................................................................................................................19113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................GTGGTTGGTGGTTGAACTTCGA............................................................................................................................................................................................................................................22112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000
.....................................................................................................................................................GGTTGGTGGTTGAACTTCGA............................................................................................................................................................................................................................................20111.0011000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000004000
...................................................................................................................................................GTGGTTGGTGGTTGAACTTCGATT..........................................................................................................................................................................................................................................24110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000002000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGAC...........................................................................................................................................................................................................................................2219.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000004000000100000000003000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCC.............................................................................................................................................................................................................................................2019.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000006000000000000000000000
..................................................................................................................................................CGTGGTTGGTGGTTGAACTTCGATTT.........................................................................................................................................................................................................................................2619.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000
...................................................................................................................................................GTGGTTGGTGGTTGAACTTCG.............................................................................................................................................................................................................................................2119.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000003000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGATG..........................................................................................................................................................................................................................................2318.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000007000
..............................................................................................................................CTTTACCGTCGTCGACTTTTCG.................................................................................................................................................................................................................................................................2218.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCA.............................................................................................................................................................................................................................................2018.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000001000
................................................................................................................................................................................................................CTGTTCATTCTCCGACACAAGT...............................................................................................................................................................................2218.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000006000000000000000001000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGATTTTA.......................................................................................................................................................................................................................................2618.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000005000000100000000001000
..................................................................................................................................................CGTGGTTGGTGGTTGAACTTCGA............................................................................................................................................................................................................................................2317.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000
............................................................................................................................CACTTTACCGTCGTCGACTTTTCG.................................................................................................................................................................................................................................................................2417.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000001000
.....................................................................................................................................................GGTTGGTGGTTGAACTTCGAT...........................................................................................................................................................................................................................................2116.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000003000
......................................................................................................................................................GTTGGTGGTTGAACTTCGA............................................................................................................................................................................................................................................1916.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGATTTC........................................................................................................................................................................................................................................2516.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000001000
...................................................................................................................................................GTGGTTGGTGGTTGAACTTCGAT...........................................................................................................................................................................................................................................2316.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000001000
..................................................................................................................................................CGTGGTTGGTGGTTGAACTTCGAT...........................................................................................................................................................................................................................................2416.006000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000001000
..................................................................................................................................................CGTGGTTGGTGGTTGAACTTCG.............................................................................................................................................................................................................................................2216.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGAAA..........................................................................................................................................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000003000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGATTTA........................................................................................................................................................................................................................................2515.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000000000000002000
.......................................................................................................................................................TTGGTGGTTGAACTTCGATTTT........................................................................................................................................................................................................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000100000000001000
.....................................................................................................................................................GGTTGGTGGTTGAACTTCGATTTT........................................................................................................................................................................................................................................2415.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000001000
....................................................................................................................................................TGGTTGGTGGTTGAACTTCGATTTTTT......................................................................................................................................................................................................................................2715.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000003000
....................................................................................................................................................TGGTTGGTGGTTGAACTT...............................................................................................................................................................................................................................................1815.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000003000
......................................................................................................................................................GTTGGTGGTTGAACTTCGAT...........................................................................................................................................................................................................................................2015.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000004000000000000000000000
droEre2
ACAGGGTACCAGATTCAACAAACCAA--AGCGAGG--------------C--CTAACTAATTTATGTGTAATATTTTACACAG------TACTTTCCTTAATCTATATAAATCAGACTATAC--CATTTT---AACGTCGACTTTTCGTGGTTGGTGGCTGAACTTAGATTTTGAG-TA--TTC----------AAATAAAA-TAAATCTGTTCATTCCTCGACACAAGAAGTTGAC-GTGCAGGAGCGGCAAAC--------------------------------------------ATGAATCGAGTG------------------AA-------------------T----C-----------AGGAAAACAGAACCACT-A--ACTCAGCACTGGGCATGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACAAGT...............................................................................................................................................................................23150.005010104350
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACAAG................................................................................................................................................................................22134.0034160101340
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACAA.................................................................................................................................................................................21113.00135000620
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACA..................................................................................................................................................................................2015.0050010310
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACAAG................................................................................................................................................................................2313.0032100000
..................................................................................................................................................CGTGGTTGGTGGCTGAACTTAG.............................................................................................................................................................................................................................................2212.0020000200
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACAAGT...............................................................................................................................................................................2412.0020000200
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACAAGC...............................................................................................................................................................................2311.0010000100
..................................................................................................................................................CGTGGTTGGTGGCTGAACTTAGA............................................................................................................................................................................................................................................2311.0010000010
..................................................................................................................................................CGTGGTTGGTGGCTGAACTTAGATT..........................................................................................................................................................................................................................................2511.0010000100
..................................................................................................................................................CGTGGTTGGTGGCTGAACTTAGAT...........................................................................................................................................................................................................................................2411.0011000000
droEug1
ACATAAAAA------------ACCAAAAGTCAA--ACTTTTATAAATCATTAAAGATT----------------------------------------------------------------------CC---AACGACGACTTCTCGTGTTTGGTGACTGAACTTGGATTTTGAA-TA--TTT----------AAATAAAA-TAAATCTGTTCAATCCTCAACACGAGAAGTCGAC-GTAAATGACCAGCAAAC--------------------------------------------ATAAATAAGGTGATAGTGCTTA--------AA-------------------A----CTAAAACATAATAAT--------TAAGAT-T--AAGAATAATTGGATATGSizeHit CountTotal NormTotal
No Reads
droBia1
CCGCG-TTTACAT--------AC-----TACGCAGATCCTACGAATGAAT--TTGATG----------------------------------------------------------------------TT---AACGCCGACTTTAGGTGTTTGGTGGCTGAACTTGGATTTTTAA-CA--GTT----------GAATGTAT-TAAATCTGTTCATTCCTCAACACAAAAAGTTGAC-GTTAAGGCCCAGCATAAAAAACAGAG-----TGATGAGACAAGGCAAT-----------------------------------------------------------------------------------A--------CAAATTTAGAATTTAGAAAAGGTCATCSizeHit CountTotal NormTotal
No Reads
droTak1
ACTAAGCATAT---TGAGAA------------AATATTATTAAAG----T--TTAATT----------------------------------------------------------------------TT---AACGTCGACTTTTCGTGTTTGGGGGCTGAACTCTGATTTTTAA-TA--ATT----------GAATTAAG-TAAATCTGTTCATTCCTCGACACAAGAAGTTGGC-GTAAAGTAACAGCGCAT--------------------------------------------ACAAATTGAGTG------------------AT-------------------AATA---------------------------ATTTGGAACTTCGAATAGGTCATCSizeHit CountTotal NormTotal
No Reads
droEle1
T------------------------------------------------------------------------------------------------------------------------------------GACATCGACTTTTTGTGTTTGGCGGATGAACTTAGATTTTTCT-TA--TTT----------GTA-AAAA-CAAATCTGTTCATTCCTCGACGCAAAAAGTTGATTGTTAAAAACCAGCACAC--------------------------------------------TCAAATGGAGCA------------------AA-------------------AAAA--------------------AATACGGGCT-G--ACTCGGAAAAGGTCATTSizeHit CountTotal NormTotal
No Reads
droRho1
TATCTAAAT--------------AAA--TTCAA-AATGCTTAA---TAATTCAACATT----------------------------------------------------------------------AA---AACATCGACTTCTCGTGTTTGGCGTCTGAACTCAGATTCTTAA-CA--GTT----------GTGTTAAATAAAATCTGTTCATTCCTCGACACAAGAAGTTGAC-GTTAAG-ACCAGCATAC--------------------------------------------TCAACTGAAGAG------------------AA-------------------AACA---------------A--------CGAGCT-T--TCTCGAAATAGGTCATCSizeHit CountTotal NormTotal
No Reads
droFic1
AT---------------------CAG--TTTAAACAATTTGGAAAAATAC--AAAACG----------------------------------------------------------------------GT---GACATTGACATCTCGTGTTTGGCGAATGAGCTCGGATTTTTGT-AGTATTT----------GAATAAGA-TAAATCTGTTCATTCCTCGACACAAGAAGTTGAA-GTTGATAATCAACTAAA---ACAAAG-----TGCTAAGGATAC------------------GC--------------------------------------------------------------------------------AATTAAAAACAAAAAAGGAGCATTSizeHit CountTotal NormTotal
No Reads
droKik1
A--------------------------------------------------------------------------------------------------------------------------------------------CTTTTCGTGCTTGGCGATTGAAGGTGGATTTGTGA-TT--TTT----------AAGC-AAT-TAAATCTGTTCAATCGTCAACACTAAAAGTTGAT-GTTATTTAGCTTCGAAC--------------------------------------------CCCAAGGAT-----CCTGCCTAGAACGGTGAG-------------------TATAGC-----------CGG--------GACATC-T--CCGCCAAGCTGGTCTTTSizeHit CountTotal NormTotal
No Reads
droAna3
A--------------------------------------------------------------------------------------------------------------------------------------------CTCCTCGTGTTTGGCGATTGAACCTGGATTTTTAA-TT--TTC----------GAGTACGA-GAAATCTGTTCATTCCTCGACACTAGTAGTTGGC-GCGACA-CTCAGCGCACCAAAC----ATGAACCGCGGCTCAAATCAATCCAATC---------------------------------------CGAATCCAATCGCGGTTGCAAT----------------------------CCT-G--GCTTGGGGTAGGTCATCSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAG................................................................................................................................................................................22170.00705700292
................................................................................................................................................................................................................CTGTTCATTCCTCGACACTAG................................................................................................................................................................................2118.008700100
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTA.................................................................................................................................................................................2118.008400040
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGT...............................................................................................................................................................................2316.006000042
..................................................................................................................................................CGTGTTTGGCGATTGAACCTGG.............................................................................................................................................................................................................................................2215.005000050
..................................................................................................................................................CGTGTTTGGCGATTGAACCTGGATT..........................................................................................................................................................................................................................................2512.002100100
..................................................................................................................................................CGTGTTTGGCGATTGAACCTGGAT...........................................................................................................................................................................................................................................2412.002000020
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACT..................................................................................................................................................................................2012.002100001
..................................................................................................................................................CGTGTTTGGCGATTGAACCTGGAA...........................................................................................................................................................................................................................................2411.001000010
..................................................................................................................................................CGTGTTTGGCGATTGAACCTG..............................................................................................................................................................................................................................................2111.001100000
....................................................................................................................................................TGTTTGGCGATTGAACCTGGATT..........................................................................................................................................................................................................................................2311.001000010
................................................................................................................................................................................................................CTGTTCATTCCTCGACACTAGT...............................................................................................................................................................................2211.001000010
..................................................................................................................................................CGTGTTTGGCGATTGAACCTGGT............................................................................................................................................................................................................................................2311.001000010
..................................................................................................................................................................................................................GTTCATTCCTCGACACTAG................................................................................................................................................................................1911.001100000
.................................................................................................................................................................................................................TGTTCATTCCTCGACACTAG................................................................................................................................................................................2011.001100000
....................................................................................................................................................TGTTTGGCGATTGAACCTGGA............................................................................................................................................................................................................................................2111.001000010
droBip1
A--------------------------------------------------------------------------------------------------------------------------------------------CTTCTCGTGTTAGGCGATTGAACCTGGATTT-AAA-TT--TTC----------GAGTACGA-GAAATCTGTTCAATCCTCGACACTAGCAGTTGGC-GCGACCGA-CTGCGCATAAAA-AC--ATTATTCGCGCCTCATATC--------C---------------------------------------CGAA-CCAATCGCGGTTGCAATC---------------C--------TTGGGT-G--GATTGGGGTAGGTCATCSizeHit CountTotal NormTotal
No Reads
droWil2
TC-----------------------------------------------------------------------------------------------------------------------------------GACATGGCCTTTTCGTGTTTGGTGATTGAACTTGGATTTTGTTCTA--TATACATATATAAAAAT-ATG-TAAATCTGTTCATTCCTCGACACTAGAAGTTCAT-GTCAATAA-CTTCATT---------------------------TC--------CTGCACACAAGAA--AAGCG------------------AA-------------------T-----------------------------CATT-C-ATTTTTCCAATGGCCATASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..............................................................................................................................................TTTTCGTGTTTGGTGATTGAACT................................................................................................................................................................................................................................................23164.00643303001
..............................................................................................................................................TTTTCGTGTTTGGTGATTGAAC.................................................................................................................................................................................................................................................22130.0030102900
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAG................................................................................................................................................................................22123.0023230000
...................................................................................................................................................................................................................TTCATTCCTCGACACTAGAAGT............................................................................................................................................................................22120.0020002000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGA...............................................................................................................................................................................23113.0013130000
..............................................................................................................................................TTTTCGTGTTTGGTGATTGAA..................................................................................................................................................................................................................................................2119.00930600
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACT..................................................................................................................................................................................2015.00550000
..............................................................................................................................................TTTTCGTGTTTGGTGATTGA...................................................................................................................................................................................................................................................2015.00500500
...............................................................................................................................................TTTCGTGTTTGGTGATTGAACT................................................................................................................................................................................................................................................2212.00210100
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTA.................................................................................................................................................................................2112.00210100
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGG...............................................................................................................................................................................2312.00220000
..................................................................................................................................................CGTGTTTGGTGATTGAACTTGGATT..........................................................................................................................................................................................................................................2512.00200011
..............................................................................................................................................TTTTCGTGTTTGGTGATTGAACTT...............................................................................................................................................................................................................................................2412.00220000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGC...............................................................................................................................................................................2311.00110000
..................................................................................................................................................CGTGTTTGGTGATTGAACTTGGATC..........................................................................................................................................................................................................................................2511.00100100
...................................................................................................................................................................................................................TTCATTCCTCGACACTAGAAGTT...........................................................................................................................................................................2311.00100100
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACAC...................................................................................................................................................................................1911.00110000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGT...............................................................................................................................................................................2311.00110000
...................................................................................................................................................................................................................TTCATTCCTCGACACTAGAAG.............................................................................................................................................................................2111.00110000
droVir3
AC--------------------------------------------------------------------------------------------------------------------------------------ATTCACTTTTCGTGTTCGATGTTTGAACTTGGATTTTTTT-TA--TAT---------------ACA-CAAATCTGTTCATTCCTCGACACTAGAAGTTTGC-GTCAATAAGCTGCCAAT--------------------------------------------AT--------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAG................................................................................................................................................................................22118038.00180382763237507201020000100010174000136876206363715255156314831132305000000000010000008011120142433043264316232400000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAG................................................................................................................................................................................2319342.009342130536037000000001001007310050343430181483828330630210010100000000000000000200070420101881213401000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACT..................................................................................................................................................................................2116136.006136123224505405010000000010702145125171611935961722199100001900000001000100001017100900571182544024432120111
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACT..................................................................................................................................................................................2012777.0027772479321028010100001010105910212015385122516941540100092000000000000000004000100095244422624354522041
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTA.................................................................................................................................................................................2112749.0027492413611210100000030000025001211084954029979901800000670100000000000000050002004280132706500112
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTA.................................................................................................................................................................................2211940.0019401015103000000000000201800000016843961915510200021028000000000000000003000100168003101010010
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGTC..............................................................................................................................................................................241954.0095448000122000100000000006300000002041656323904900000850000000000000000000001000000030100000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACAC...................................................................................................................................................................................201407.004072090000200000000000030000000127864111303000005000000000000000000000000101006500002010
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGT...............................................................................................................................................................................231328.0032830000203000000000000190000010927215740180000027000000000000000000000000000000011000000
................................................................................................................................................................................................................CTGTTCATTCCTCGACACTAG................................................................................................................................................................................211285.00285002700400000000000000100000008466148502000001000000000000000000000000100000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACA....................................................................................................................................................................................191278.002782070000100000000000030002701575817430500001000000000000000000000000001001417111313500000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGTC..............................................................................................................................................................................251242.0024200100300000000000000130000000664317580130000023000000000000000000000500000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGA...............................................................................................................................................................................231163.0016352130000000000000000000000010231652600001000000000000000000000000001000059837200000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTT.................................................................................................................................................................................221162.0016200000200000000000000100000005631165000000004000000000000000000000000200000000000000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATTT.........................................................................................................................................................................................................................................261137.0013700100702000000000000400000004722123503000003000000000000000000000100000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGTCC.............................................................................................................................................................................251130.0013059010000000000000000050000000111172204000008000000000000000000000000000010100000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGT...............................................................................................................................................................................241126.0012600100003010000000000700000004622621030000016000000000000000000000000000000000000000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATT..........................................................................................................................................................................................................................................251109.0010900000151503000000000011000000024981508000018000000000000000000000000000000001000000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGG.............................................................................................................................................................................................................................................22189.00890000230301000000000040000000331521703000006000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACAC...................................................................................................................................................................................19182.00827050000000000000000000000000221471303000002000000000000000000000000001011005000010
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTC.................................................................................................................................................................................22174.00740040010000000000000010000000177122203000004000000000000000000000000000002100000000
.................................................................................................................................................................................................................TGTTCATTCCTCGACACTAG................................................................................................................................................................................20169.00690000000000000000000000000000221282601000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGTCT.............................................................................................................................................................................25160.0060150000300000000000000200000001693502000005000000000000000000000000000000000000000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGA............................................................................................................................................................................................................................................23152.005200000501010000000000500001009104803000005000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAT................................................................................................................................................................................23147.0047000000000000000000000000000014581901000000000000000000000000000000000000000000000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGAT...........................................................................................................................................................................................................................................24145.00450000020002000000000020000010795903000005000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACC..................................................................................................................................................................................20143.004338100000000000000000000000000020000000000000000000000000000000000000000100100000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACA....................................................................................................................................................................................18141.004140000000000000000000100000005126902000002000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGA...............................................................................................................................................................................24138.00380000000000000000000000000000121041000000000000000000000000000000000000020000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTC.................................................................................................................................................................................21136.00361020000000000000000010000000583403000007000000000000000000000000000000110000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAT................................................................................................................................................................................22135.003500000000000000000000000001001553901000001000000000000000000000000000000000000000
................................................................................................................................................................................................................CTGTTCATTCCTCGACACTA.................................................................................................................................................................................20132.00320060000000000000000000000000972800000000000000000000000000000000000000000000000
................................................................................................................................................................................................................CTGTTCATTCCTCGACACT..................................................................................................................................................................................19132.00321050000000000000000000000000943800000000000000000000000000000000000000000200000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACC..................................................................................................................................................................................21130.003010001000000000000000000000000322501000000000000000000000000000000000010023000000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATTTC........................................................................................................................................................................................................................................27129.002900000200000000000000000000007103401000002000000000000000000000000000000000000000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATC..........................................................................................................................................................................................................................................25125.00250000020000000000000000000000534700000002000000000000000000000000000020000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAA................................................................................................................................................................................23124.002400000000000000000000000000006521100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGTT..............................................................................................................................................................................24122.00220000000000000000000000000000534901000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAA................................................................................................................................................................................22122.00220030000000000000000000000001215501000000000000000000000000000000011000100000001
.................................................................................................................................................................................................................TGTTCATTCCTCGACACT..................................................................................................................................................................................18116.00160000000000000000000000000000662100000001000000000000000000000000000000000000000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTG..............................................................................................................................................................................................................................................21116.00160000010202000000000020000000340200000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGAC.....................................................................................................................................................................................18116.00161000000000000000000000000000010400000001000000000000000000000000000012311100000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGTCC.............................................................................................................................................................................26115.00151000010000000000000000000000301900000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTTT................................................................................................................................................................................23114.00140000000000000000000000000000432500000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTT.................................................................................................................................................................................21114.00140000000000000000000000000000522500000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GTTCATTCCTCGACACTAG................................................................................................................................................................................19114.00140000000000000000000020000000621300000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGG...............................................................................................................................................................................23113.001311000000000000000000000000000110000000000000000000000000000000000000000000000000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATTTCC.......................................................................................................................................................................................................................................28112.00121000030000000000000000000000201400000001000000000000000000000000000000000000000
.................................................................................................................................................................................................................TGTTCATTCCTCGACACTA.................................................................................................................................................................................19112.00120000000000000000000000000000313301000000000000000000000000000100000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACG..................................................................................................................................................................................20111.001110010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACC....................................................................................................................................................................................19110.00100010000000000000000000000000041102000001000000000000000000000000000000000000000
...................................................................................................................................................................................................................TTCATTCCTCGACACTAG................................................................................................................................................................................18110.00100000020000000000000000000000211102000001000000000000000000000000000000000000000
................................................................................................................................................................................................................CTGTTCATTCCTCGACACTAGTC..............................................................................................................................................................................23110.00100000000001000000000000000000211102000001000000000000000000000100000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGTCA.............................................................................................................................................................................2519.0095000000000000000000000000000111100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAC................................................................................................................................................................................2319.0090001000000000000000010000000201400000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACT....................................................................................................................................................................................1918.0080000000000000000000000000000020100000000000000000000000000000000000010103000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGTCT.............................................................................................................................................................................2618.0080000000000000000000020000000111300000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACA..................................................................................................................................................................................2117.0070000000000000000000000000000101300000000000000000000000000000000010001000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGTTC.............................................................................................................................................................................2517.0071000010000000000000000000000111200000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGC...............................................................................................................................................................................2316.0061000000000000000000000000000010200000002000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGTTC.............................................................................................................................................................................2616.0060000000000000000000000000000021300000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGCC..............................................................................................................................................................................2415.0051000000000000000000000000000110100000001000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACAA...................................................................................................................................................................................2015.0050010000000000000000000000200000000000000000000000000000000000000001000000100000
.................................................................................................................................................................................................................TGTTCATTCCTCGACACTAGTC..............................................................................................................................................................................2215.0050000010000000000000000000000020000000002000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGTT..............................................................................................................................................................................2515.0050000000000000000000010000000110200000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACAAA..................................................................................................................................................................................2115.0050000000000000000000000001000000000000000000000000000000000000000000004000000000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATTC.........................................................................................................................................................................................................................................2615.0050010010000000000000000000000100100000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAC................................................................................................................................................................................2214.0040000000000000000000000000000000400000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACTAG..................................................................................................................................................................................2114.0040000000000000000000000000000011200000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTTC................................................................................................................................................................................2314.0040000000000000000000000000000013000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGAA..............................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000010010001000001
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTCT................................................................................................................................................................................2314.0040000000000000000000010000000200100000000000000000000000000000000000000000000000
..................................................................................................................................................CGTGTTCGATGTTTGAACT................................................................................................................................................................................................................................................1914.0041000000001000000000000000000000001000001000000000000000000000000000000000000000
................................................................................................................................................................................................................CTGTTCATTCCTCGACACTAGT...............................................................................................................................................................................2214.0040000000000000000000000000000001101000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGAAA.............................................................................................................................................................................2514.0040010000000000000000000000000000000000000000000000000000000000000001000002000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTG.................................................................................................................................................................................2113.0032000000000000000000000000000000000000000000000000000000000000000010000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACA..................................................................................................................................................................................2013.0030000000000000000000000000000000200000000000000000000000000000000000010000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTATC...............................................................................................................................................................................2413.0030000000000000000000000000000100200000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GTTCATTCCTCGACACTAGTC..............................................................................................................................................................................2113.0030000010000000000000010000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................CGTGTTCGATGTTTGAACTT...............................................................................................................................................................................................................................................2013.0030000010000000000000000000000110000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACC....................................................................................................................................................................................1813.0033000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTCC................................................................................................................................................................................2312.0020000000000000000000000000000000200000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGATC.............................................................................................................................................................................2512.0020000000000000000000000000000000200000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTATTC..............................................................................................................................................................................2512.0020000000000000000000000000000200000000000000000000000000000000000000000000000000
..................................................................................................................................................CGTGTTCGATGTTTGAAC.................................................................................................................................................................................................................................................1812.0020000000000000000000000000000010100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACG..................................................................................................................................................................................2112.0022000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATTTA........................................................................................................................................................................................................................................2712.0020000000000000000000000000000100100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGACT.............................................................................................................................................................................2512.0020000000000000000000000000000000100000000000000000000000000000000000010000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAGCT..............................................................................................................................................................................2412.0020000020000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................CTGTTCATTCCTCGACACTAGA...............................................................................................................................................................................2212.0020000000000000000000000000000100100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGCT..............................................................................................................................................................................2512.0020000000000000000000000000000010000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACTAG..................................................................................................................................................................................2051.4070000000000000000000000000000410200000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTTTT...............................................................................................................................................................................2411.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................CTGTTCATTCCTCGACACTAA................................................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAGAC..............................................................................................................................................................................2511.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
droMoj3
A--------------------------------------------------------------------------------------------------------------------------------------------CTTTTCGTGTTCGATGTTTGAACTTGGATTTTTAA-AA--TAT----------GA---AAA-GAAATCTGTTCATTCCTCGACACTAAGAGTTTAG-GTCTATAAACAAC----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTA.................................................................................................................................................................................21148.004833000114
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAA................................................................................................................................................................................22127.00272300004
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACT..................................................................................................................................................................................20117.00171101005
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAT................................................................................................................................................................................2218.008400013
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACT..................................................................................................................................................................................2116.006300012
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTAA................................................................................................................................................................................2316.006401010
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATTT.........................................................................................................................................................................................................................................2615.005100004
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATT..........................................................................................................................................................................................................................................2515.005100013
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACACTA.................................................................................................................................................................................2215.005300011
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATC..........................................................................................................................................................................................................................................2513.003100002
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTAAT...............................................................................................................................................................................2313.003101001
................................................................................................................................................................................................................CTGTTCATTCCTCGACACT..................................................................................................................................................................................1912.002200000
................................................................................................................................................................................................................CTGTTCATTCCTCGACACTA.................................................................................................................................................................................2012.002200000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTT.................................................................................................................................................................................2112.002200000
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACA....................................................................................................................................................................................1911.001100000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATTTTC.......................................................................................................................................................................................................................................2811.001000001
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATTTC........................................................................................................................................................................................................................................2711.001000001
..............................................................................................................................................................................................................ATCTGTTCATTCCTCGACAC...................................................................................................................................................................................2011.001000010
................................................................................................................................................................................................................CTGTTCATTCCTCGACACTAA................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACC..................................................................................................................................................................................2011.001000010
..................................................................................................................................................................................................................GTTCATTCCTCGACACTA.................................................................................................................................................................................1811.001100000
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTC.................................................................................................................................................................................2111.001100000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATTTCCC......................................................................................................................................................................................................................................2911.001000001
...............................................................................................................................................................................................................TCTGTTCATTCCTCGACACTACC...............................................................................................................................................................................2311.001000001
................................................................................................................................................................................................................CTGTTCATTCCTCGACACTATC...............................................................................................................................................................................2211.001100000
..................................................................................................................................................CGTGTTCGATGTTTGAACTTGGATTC.........................................................................................................................................................................................................................................2611.001000001

Generated: 10/20/2015 at 10:34 PM