ID:

dsi_16895

 Coordinate:

3l:3007613-3007762 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.4 -7.2 -6.8 -6.6

Flybase annnotation

exon [3l_3007763_3008289_+]; five_prime_UTR [3l_3007763_3008118_+]; intron [3l_3006844_3007762_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GACTGTATAATTACATACACACGCAGTCCCGCCGTTGTTGTTGTTTCTGTTTGCTTTTTTATTGTAAGCGAGAAGAGCGCGCAGCTGTGAAAAGCAGAGAGGAAGAGAGCGAGAGAGTGGAATTTGTTGTTGAGCAATTTGTGTAACCATCGATAATGTTTGATTTATTTAAACCCCATTTTTATTACCCCTTTTTGCAGTGACTCGCGATGCGTGCGGCATAGAAGTCGTCGCCCCCCAAAAACCGAGA
***************************************************************************(((..((((((((.....))))..........................)))).)))*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M023
head
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 O002
Head
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
................................................................................................................................................................................................................GATGCGTCCGGCGTAGAGG....................... 19 3 18 2.17 39 39 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GCATAGAAGTCGTCGCCC.............. 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ACTCGCGATGCGTGCGGC.............................. 18 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
.........................................................................................................................................................................................................................GGCATAGAAGTCGTCGCC............... 18 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CGATGCGTCCGGCGTAGA......................... 18 2 7 1.00 7 7 0 0 0 0 0 0 0 0 0
.......................................................................................TGAAATGCAGAGTTGAAGAGAG............................................................................................................................................. 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................GCAGTGACTCGCGATGCGTGCGGC.............................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................GTGATAAGCCGAGAGGAAG................................................................................................................................................. 19 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................ATAGAAGTCGTCGCCCCC............ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................GAGAGAGTGGAATTTGTTGTT....................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................AGCGCGCAGCTGTGAAAAGCAGAGAGGA................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................TGCGTGCGGCATAGAAGTCG.................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................TGAAATGCAGAGAAGAAGAGAG............................................................................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................GCAGAGAGGAAGAGAGCG........................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.......................................................................................TGAAAGGCAGAGTAGAAGAGAG............................................................................................................................................. 22 3 2 1.00 2 0 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CGCGATGCGTGCGGCATGG.......................... 19 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..................................................................................................................GAGTGGAATTTGTTGTTGAGCAATT............................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................TGAAAGGCAGAGTTGAAGAGAG............................................................................................................................................. 22 3 3 0.67 2 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CGATGCGTCCGGCGTAGAGG....................... 20 3 6 0.67 4 3 0 0 0 0 0 0 0 0 1
......................................................................................GTGATAAGCCGAGAGGA................................................................................................................................................... 17 2 13 0.62 8 0 0 0 0 2 2 0 0 3 1
.....................................................................GAGAATAGCGCGCAG...................................................................................................................................................................... 15 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CACGATGCGTCCGGCGTAGA......................... 20 3 6 0.50 3 3 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GATGCGTCCGGCGTAGAAATC..................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TCAAAGGCAGAGATGAAGAGAG............................................................................................................................................. 22 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CGATGCGTCCGGCGTAGAA........................ 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TGAAAGGCAGAGAAGAAGAGAT............................................................................................................................................. 22 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
......................................................................................GTGATAAGCCGAGAGGAA.................................................................................................................................................. 18 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................GCAGTGTCTCGCGATG...................................... 16 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TAATTTTTGATTTATTT................................................................................ 17 1 20 0.25 5 0 0 0 0 0 0 0 0 0 5
....................................................................................CGGTGATAAGCCGAGAGGAAG................................................................................................................................................. 21 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0
......................................................................................GTGATAAGCCGAGAGGAAGG................................................................................................................................................ 20 3 7 0.14 1 0 0 0 0 0 0 0 0 1 0
........................................................................................GAAAAGCAGAGAGAAAG................................................................................................................................................. 17 1 17 0.12 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTGATTTATTTAAACCTG......................................................................... 18 2 20 0.10 2 0 0 2 0 0 0 0 0 0 0
...............................................................GTACGCGAGAAGACCG........................................................................................................................................................................... 16 2 20 0.10 2 0 0 0 0 0 2 0 0 0 0
...............................................................................................................................................................................................................CGATGCGTCCGGCGTAGAAA....................... 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CGATGCGTCCGGCGTAG.......................... 17 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................AAAAGCAGAGAGAAAG................................................................................................................................................. 16 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TAATTTTTGATTTATTTA............................................................................... 18 1 17 0.06 1 0 0 0 0 0 0 0 0 0 1
..............................GCCGTTGGTGTAGTTTCTA......................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CTGACATATTAATGTATGTGTGCGTCAGGGCGGCAACAACAACAAAGACAAACGAAAAAATAACATTCGCTCTTCTCGCGCGTCGACACTTTTCGTCTCTCCTTCTCTCGCTCTCTCACCTTAAACAACAACTCGTTAAACACATTGGTAGCTATTACAAACTAAATAAATTTGGGGTAAAAATAATGGGGAAAAACGTCACTGAGCGCTACGCACGCCGTATCTTCAGCAGCGGGGGGTTTTTGGCTCT
***********************************************************************************************************************(((..((((((((.....))))..........................)))).)))*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 GSM343915
embryo
...............................................................................................................................................................................................................GCTACGCAGGCCGCATCT......................... 18 2 7 6.29 44 43 0 0 1 0 0
............................................................................................................................................................................................................AGTGCTACGCAGGCCGCATCT......................... 21 3 2 2.50 5 5 0 0 0 0 0
............................................................................................................................................................................................................AGCGCTACGCAGGCCGCATCT......................... 21 2 1 2.00 2 2 0 0 0 0 0
..............................................................................................................................................................................................................CGCTACGCAGGCCGCATCT......................... 19 2 2 1.50 3 3 0 0 0 0 0
.........................................................................................................................................................................TTTTGGGGTAAAAATAATGGGGA.......................................................... 23 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................................................................................................TGCAGCGGGGGGTTTTTGGC... 20 1 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................................................................ACCGCTACGCAGGCCGCATCT......................... 21 3 4 0.75 3 3 0 0 0 0 0
.............................................................................................................................................................................................................GTGCTACGCAGGCCGCATCT......................... 20 3 6 0.50 3 3 0 0 0 0 0
................................................................................................................................................................................................................CTACGCAGGCCGTATCT......................... 17 1 2 0.50 1 1 0 0 0 0 0
............................................................................................................................................................................................................AGAGCTACGCAGGCCGCATCT......................... 21 3 2 0.50 1 1 0 0 0 0 0
................................................................................................................................................................................................................CTACGCAGGCCGCATCTCCA...................... 20 3 3 0.33 1 1 0 0 0 0 0
............................................................................................................................................................................................................AGTGCTACGCAGGCCGCATC.......................... 20 3 3 0.33 1 1 0 0 0 0 0
...............................................................................................................................................................................................................GCTACGCAGGCCGCATC.......................... 17 2 10 0.30 3 3 0 0 0 0 0
..................................................................................................................................................................................................................ACGCACGCCGCATCT......................... 15 1 4 0.25 1 1 0 0 0 0 0
...............ATGTGAGCGTCAAGGCGACA....................................................................................................................................................................................................................... 20 3 8 0.25 2 0 0 2 0 0 0
....................................................................................................................CCCCTTAAACAACAAATCG................................................................................................................... 19 2 6 0.17 1 0 0 0 0 1 0
................................................................................................................................................................................................................CTACGCATGCCGCATCT......................... 17 2 9 0.11 1 1 0 0 0 0 0
................................................................................................................................................................................................................CTACGCAGGCCGCATCTCC....................... 19 3 18 0.11 2 2 0 0 0 0 0
.............................................................................................................................................................................................................GTGCTACGCAGGCCGCATC.......................... 19 3 10 0.10 1 1 0 0 0 0 0
......................................................AAAAAAAAACATTCGCGCT................................................................................................................................................................................. 19 2 13 0.08 1 0 0 0 1 0 0
..........................................................................................TATCGTCTCTCTTTCTCTCACT.......................................................................................................................................... 22 3 14 0.07 1 0 0 0 0 0 1
..........................GGGGCGGCAACAACATCA.............................................................................................................................................................................................................. 18 2 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:3007563-3007812 + dsi_16895 GACTGTATAATTACATACACAC----GCAGT-----CCCGCC---GT------TGTTGT------TG---------------TTTCTG----------------TTTGCTTTTTTATTGTAAGCGA--------GAAGAGC-G---CGCAGCTGTGAAAA----------------GCA-----------GAG----------------------------------AGGAAGAGAGCGAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------TTGTTGTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------ATT--------------------------------TTTA-T--TACCCCT-T-TT----TGCAGTGACTCGCGATGCGTGC-GGCATAGAAGTCGTCGCCCCCC-----------AAAAACCG-AGA
droSec2 scaffold_2:3143045-3143294 + GACTGTATAATTACATACACAC----GCAGT-----CCCGCC---GT------TGTTGT------TG---------------TTTCTG----------------TTTGCTTTTTTATTGTAAGCGA--------GAAGAGC-G---CGCAGCTGTGAAAA----------------GCA-----------GAG----------------------------------AGGAAGAGAGCGAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------TTGCTGTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------ATT--------------------------------TTTA-T--TACCCCT-T-TT----TGCAGTGACTCGCGATGCGTGC-GGCATAGAAGTCGTCGCCCCCC-----------AAAAACCG-AGA
dm3 chr3L:3149417-3149678 + GACTGTATAATTACATACACAC----GCAGT-----CCCGCC---GA------TGTTGT------TG---------------TTTCTG----------------TTTGATTTTTTATTGTAAGCGA--------GAAGAGC-G---CGCAGCTGTGAAAA----GCAGATGAGA----------GAGA--GAG----------------------------------AGGAAGAAAGCGAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------TTGTTGTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------ATT--------------------------------TTTA-T--TACCCCT-T-TT----TGCAGTGACTCGCGATGCGTGC-GGCATAGAAGTCGTCGCCCCCC----------AAAAAACCG-TGA
droEre2 scaffold_4784:3158484-3158746 + GACTGTATAATTACATACACAC----GCAGT-----GCCGCC---GT---TGTTGTTGT------TG---------------TTTCTG----------------TTTTCTTTTTCATTGTAAGCGA--------GAAGAGC-G---CGCAGCTGTGAAAG----------------GCAA--AAGAGA--CAC------------------------AGAGAGAGAGAGGAAG-----------------------------------------------------------AGAGC-GAAT------------------------------------------------------------------------------------TTGTTGTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CTCC------------------ATT--------------------------------TTTA-T--TACCCCT-T-TT----TGCAGTGACTCGCGATGCGTGC-GGCATAGAAGTCGACACCCCCCC---------CAAAAACCG-AAA
droYak3 3L:8792265-8792524 - GACTGTATAATTACATACACAC----GCAGT-----CCCGCCGTTGC------TGTCGTTGTTGTTG---------------TTTCTG----------------TTTTCT-TTTTATTGTAAGCGA--------GGAGAGC-G---CGCAGCTGTGAAAG----------------GCAA--AA------GAG----------------------------------ATGAAGAGAGCGAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------TTGTTGTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------ATT--------------------------------TTTA-T--TACCCCT---TT----TGCAGTGACTCGCGATGCGTGC-GGCATAGAAGTCGGCACCCCCC-----------AAAAACCG-AAA
droEug1 scf7180000409466:873249-873514 + GACTGTATAATTACATACACAT----GCAGT-----CCC------ATTGTTGTTGTTCT------TG---------------TTTGTGGT-----------------------TTTTTGTAAGCGA--------AGAGAGC-G---CGCAGCTGTGATAC------AGAAGAAA-GGCAA--AAGAGA--GAA------------------------AGGG----------AGAGTGTGGC---------------------------------------------------AGAGCGGAAT------------------------------------------------------------------------------------TTGTTTTCGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------GAT--------------------------------TTTT-G--TACCCCT-T-TT----TGCAGTGACTCGCGATGCGTGC-GGCCTAGAAGTCGTCACCCCCCC-C------AAAAAAACCG-AAA
droBia1 scf7180000302428:2497109-2497389 + GACTGTATAATTACATACACAC----GCAGC--------GCC---GT------TGTTGT------TG---------------TTTGTGGTTTTCATTTCTTCTTTTTCCC-TTTTTTTGTAAGCA-----------AGAGC-G---CGCAGCTGTGATAC------AGAAGAAA-GGCAA--A-AAGA--G------------------------AGTGCG----------AGAGAGTG------------------------G---------------------GAGTGGGAGAGCGGAAT------------------------------------------------------------------------------------TTGTTTTCGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTAA---------AA--------CCCC------------------ATT--------------------------------TTTT-G--TACC-CT-T-TT----TGCAGTGACTCGCCATGCGTGC-GGCCTAGAAGTCGTCACCCCCCC---------AAAAAACCG-ACA
droTak1 scf7180000415378:254377-254676 - GACTGTATAATTACATACACAC----GCAGC-----CCCCCC---GT---TATTGTTGT------TG---------------TTTGTGGTTTTCATTTC------TTCCTTTTTTTTTGTAAGCGA-----AGAGGAGAGC-G---CGCAGCTGTGATAC------AGAAGAAA-GGCAA--AAAAGA--G------------------------AGCGCG------------------------------------AGAGAG--------------AG------GAGTGGGAGAGCGGAAT------------------------------------------------------------------------------------TTGTTTTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTAA---------AA--------CCCC------------------ATT--------------------------------TTTT-G--TACCCCT-T-TTTCATTGCAGTGACTCGCGATGCGTGC-GGCCTAGAAGTCGTCACCCCCCC-CT-CGAAAAAAACACCG-AAA
droEle1 scf7180000491249:2138640-2138894 - GACTGTATAATTACACACATAC----GCAAT-----CCC-------T------TGTTGT------TG---------------TTTGTGGT----------------------TTTTTTGTAAGCGG-----GAGAGAGAGC-G---CGCAGCTGTGATAC------AGAAA-GA------------------T------------------------------------AGAGAGAG--------------------AGAGAG-----------------------------AGCGCGGAAT------------------------------------------------------------------------------------TTGTTTTTGAGCAATTTGTGTAACCCAT-----------CGATAA-TTTTTGATTTATTTA---------AA--------CCTC---------------G--ATT--------------------------------TTTA-TTGTACCCCT-TTTT----TGCAGTGACTAGCAATGCGTGC-GGCCTAGTAGTCGTAACTCCCGCCCC------CGAGAACCG-AAG
droRho1 scf7180000777063:109188-109422 - GACTGTATAATTACATACACACACACGCAGC-----CCC-------T------TGTTGT------TG---------------TTTGTGC--------------------A--TTTTTTGTAAGCGA-----GAGAGAGAGC-G---CGCAGCTGTGATAC------AGAAA-------------------------------------------------------------------GAG---------------------------------------------------AGAGCGGAAT------------------------------------------------------------------------------------TTGTTTTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------ATT--------------------------------TTTA----TACCCCTTT-TT----TGCAGTGACTCGCGATGCGTGC-GGCCTAGAAGTCGTAACCCCCC-----------GAAAACCG-AAG
droFic1 scf7180000454105:1463413-1463673 + GACTGTATAATTACATACACAC----GCAGA--------GCC---GT------TGTTGT------TG---------------TTTGTGGT----------------------TTTTTTGTAAGCGA--------GGAGAGC-G---CGCAGCTGTGATAC------AGAAGAAA-GACGA--AAGAGA--GAG------------------------AAGG----------AGAGAGCG------------------------C---------------------GA---AGAGAGCGGAAT------------------------------------------------------------------------------------GTGTTTTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------ATT--------------------------------TTTT-G--TACCCCT-T-TT----TGCAGAGACTCGCGATGCGTGC-GGCCTAGAAGTCGTCACCCCCC-----------TGAAACCGAAAA
droKik1 scf7180000302577:1330725-1331057 + GACTGTATAATTACATACACAC----GCAGC--------GTT---GT------TGTTGTTGCTCCCG------CTGTTGTTGTTTGTGGT------------------------TTTTGTAAGC--------------AGC-G---CGCAGCTGTGATAC------AGAAGAAACGGTGA--A-AACGAAGAAAGCGGG----------------AGTGCG------------------------------------AGAGAGGGAGCAGGAGCAGCAGCAGAAGGAGCGGGAGCG----------------ACGGAGAGCACAACAAA-------------------------------------------------------------------GTGATTTCTGTAAC-CATTGAGCACATTTCGATAATTGTTTGATTTATTTTCGAGTCACCAACACCATAATACC------------------ATT--------------------------------CCT------TCGTTT-T-TT----TGCAGTGGCTCGCGATGCGTGC-GGCATAGAAGTCGTCACCCTTCCCCTTT----GGAACCCCG-AAC
droAna3 scaffold_13337:8967375-8967502 - GACTGTATAATTACATACACAC----GCAGCAACAACACGCG---GA------TGTTGT------TG---------------T-TGTGGT------------------------TTTTGTAAGCAG--------CGAGAGC-G---CGCAGCTGTGATAC------AGAAGAAA-CGCGGAG--AAAG----------G----------------AGTGTG------------------------------------AGAGAA-----------------------------AGAGTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395984:17513-17646 - GACTGTATAATTACATACACAC----GCAGCAACAACACGCG---GA------TGTTGT------TG---------------T-TGTGGT------------------------TTTTGTAAGCAG--------CGAGAGC-G---CGCAGCTGTGATAC------AGAAGAAA-CGCGGAG--AAAG----------G----------------AGTGTG------------------------------------AGAGAA-----------------------------AGAGTGGCCT------------------------------------------------------------------------------------CTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XR_group8:4013629-4013919 + GACTGTATAATTACATACGAGC----GTGCG------------------------------------------------------------------------------------------AGC----------GCAGCGCGG---CGCAGCTGTGATAC------ACA-GAAA-CGCAGAG--CAGGAAGGTGCCAGAACGACGTCGAAAAGAGAGCGC--------------------------------------------------GGGCGGGCAGACAAC------------------GGACAAGGGAGAGAAAACACAACAAAGTTGATGAAAATTTTGGCAGTTTGGGGGAAAAGCTTT--------------------------------------TGTGAA-AAA-----------CG-------ATCGGAGATTG-G---------AG--------TCCAGATAATTTATT-TGTGGCA--TT--------------------------TGCTCTTC-T--T----------TCCATTTTAGTGATGTACGATGCGTGC-GGCATAGAAGCTATAAACCCACC---------------------A
droPer2 scaffold_29:245560-245850 + GACTGTATAATTACATACGAGC----GTGCG------------------------------------------------------------------------------------------AGC----------GCAGCGCGG---CGCAGCTGTGATAC------ACA-GAAA-CGCAGAG--CAGGAAGGTGCCAGAACGACGTCGAAAAGAGAGCGC--------------------------------------------------GGGCGGGCAGACAAC------------------GGACAAGGGAGAGAAAACACAACAAAGTTGATGAAAATTTCGGCAGTTTGGGGGAAAAGCTTT--------------------------------------TGTGAA-AAA-----------CG-------ATCGGAGATTG-G---------AG--------TCCAGATAATTTATT-TGTGGCA--TT--------------------------TGCTCTTC-T--T----------TCCATTTTAGTGATGTACGATGCGTGC-GGCATAGAAGCTATAAACCCACC---------------------A
droWil2 scf2_1100000004822:2999748-2999885 - GACTGTGTAATTACATACACAC----GTCTC--------AATGTTGT------TTTTGTTGTTGCTG------TTTTTT---TT--------------------TTTCAT-TTTTTTTGTAAGCAGCAGAAGCGAGAGAGC-AAACAGCAGCTGTGAGAT----ACATAGAAAC-CGTAA--G-AAAA--------------------------------------------AAG---------------------------------------------------------AGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:23686365-23686489 - AGA-------------------------------------------------------------------------------------------------------------------------G---------AGAGA---------------------------------------------------GCGAGCGAG----------------AGTGTG------------------------------------AGGGAG-----------------------------AGCACGTAAC----------------------------------------------------------------AAGCAG---------------------------------------------------------------------------------------------------CCAACTTACA-TCAGCCG----------------------------------TTTT-G--CACT-CT-T-CT----GCCTGTGTCTTGCTACCTGTACTCGCACAGCAATAGC-------------------AACAACTA-CAA
droMoj3 scaffold_6473:15705987-15706145 + GAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------AAGA----GAG----------------------------------AGAAAGAGAGAGAGAGAGTGAGACAGACTAATCGA-----------------------------CACTGCAGCAGCG------------------------------------------------------ACAAGTTT--------------------------------------TGTGA---------------------------------------------------------------TTGCCTACTTTTTGGCA--CGCCGCTGCTTGCAATCAACGCGCGGCTCGGTCTTGGC--T----------TGGATT------------------TAG-GCCACAGCAGCTGTCTGCCCTG-----------------------
droGri2 scaffold_15081:3515640-3515862 - GTT------------------------------------GTG---GT------TGTTGT------TGTTGTTGTTGTTG---TT-------------------------------GC--TGAGCA-------------------------CGTGTGCTAAACAC--ACA-CACA-AGTAGAG--AG-------------------------------------------AGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGA-----------------------------GAGAGAGGAAACGGAAGATATAGAGA--T----------------------------------------------AAACAGCCAGTTATCATTAAT-----------------TGTTGT-TGT-----------TGAAAG-TGACTGATGTCTGTA---------AA--------TCCA------------------AGA--------------------------------AA---------------------------------------------TGCACTGAAAACATCCCCCCAC-----------ACTCACAC-ACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GACTGTATAATTACATACACAC----GCAGT-----CCCGCC---GT------TGTTGT------TG---------------TTTCTG----------------TTTGCTTTTTTATTGTAAGCGA--------GAAGAGC-G---CGCAGCTGTGAAAA----------------GCA-----------GAG----------------------------------AGGAAGAGAGCGAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------TTGTTGTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------ATT--------------------------------TTTA-T--TACCCCT-T-TT----TGCAGTGACTCGCGATGCGTGC-GGCATAGAAGTCGTCGCCCCCC-----------AAAAACCG-AGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATAGAAGTCGTCGCCC..........................1812.00220000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGCGATGCGTGC-GGC..........................................1812.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATAGAAGTCGTCGCC...........................1812.00210100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGACTCGCGATGCGTGC-GGC..........................................2411.00100000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAAGTCGTCGCCCCC........................1811.00100100000000000000
..............................................................................................................................................................................................................................................GAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------TTGTTGTT.............................................................................................................................................................................................................................2111.00100000000001000000
..........................................................................................................................................AGC-G---CGCAGCTGTGAAAA----------------GCA-----------GAG----------------------------------AGGA................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGC-GGCATAGAAGTCG................................2011.00110000000000000000
................................................................................................................................................................................GCA-----------GAG----------------------------------AGGAAGAGAGCG........................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
.....................................................................................................................................................................................................................................................................................................GAGTGGAAT------------------------------------------------------------------------------------TTGTTGTTGAGCAATT.....................................................................................................................................................................................................................2511.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTTATTTA---------AA--------CCTG------------------...............................................................................................................................18200.10220000000000000000
droSec2
GACTGTATAATTACATACACAC----GCAGT-----CCCGCC---GT------TGTTGT------TG---------------TTTCTG----------------TTTGCTTTTTTATTGTAAGCGA--------GAAGAGC-G---CGCAGCTGTGAAAA----------------GCA-----------GAG----------------------------------AGGAAGAGAGCGAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------TTGCTGTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------ATT--------------------------------TTTA-T--TACCCCT-T-TT----TGCAGTGACTCGCGATGCGTGC-GGCATAGAAGTCGTCGCCCCCC-----------AAAAACCG-AGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGTGC-GGCATAGAAG...................................1811.0010001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGATGCGTGC-GGCATAGA.....................................2011.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGACTCGCGATGCG.................................................1811.0010001
dm3
GACTGTATAATTACATACACAC----GCAGT-----CCCGCC---GA------TGTTGT------TG---------------TTTCTG----------------TTTGATTTTTTATTGTAAGCGA--------GAAGAGC-G---CGCAGCTGTGAAAA----GCAGATGAGA----------GAGA--GAG----------------------------------AGGAAGAAAGCGAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------TTGTTGTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------ATT--------------------------------TTTA-T--TACCCCT-T-TT----TGCAGTGACTCGCGATGCGTGC-GGCATAGAAGTCGTCGCCCCCC----------AAAAAACCG-TGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGACTCGCGATGCGTGC-G............................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000001100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGACTCGCGATGCG.................................................1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000002000000000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................C-G---CGCAGCTGTGAAAA----GCAGATGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTCGCGATGCGTGC-GGC..........................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004
.........................................................................................................................................GAGC-G---CGCAGCTGTGAAAA----GCAGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTAAC-CAT-----------CGATAA-TGTTTG.................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................GAGA--GAG----------------------------------AGGAAGAAAGCG........................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGTAAC-CAT-----------CGATAA-TGT....................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGC-GGCATAGAAGTC.................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGACTCGCGATGCGTGC-G............................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGC-GGCATAGAAGTCGTCGC............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................GTGAAAA----GCAGATGAGA----------GAGA--G........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GAGTGGAAT------------------------------------------------------------------------------------TTGTTGTTGAG..........................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------TTGTTGTTGAGCAATTTGTG.................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GAGTGGAAT------------------------------------------------------------------------------------TTGTTGTTGAGC.........................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGCGTGC-GGCATAGAAGTCGTCG.............................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------TTGTTGTTGAGC.........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TGCAGTGACTCGCGATGCGTG...............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.........................................................................................................................................GAGC-G---CGCAGCTGTGAAAA----GCAGATGAGA----------GAGA--G........................................................................................................................................................................................................................................................................................................................................................................................................................................3411.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGCGTGC-GGCATAGAAG...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----TGCAGTGACTCGCGATGCG.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTGACTCGCGATGCGTGC-GGC..........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGTGC-GGCATAGAAGTCGTCGCCC..........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGCGATGCGTGC-GGCATAGAA....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................................................................GAAGAAAGCGAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGC-GGCATAGAAGTCGTCGC............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGACTCGCGATGCGTGC-GG...........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTGACTCGCGATGCGTGC-GG...........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAAGTCGTCGCCCCCC----------A............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................GA------TGTTGT------TG---------------TTTCTG----------------TTTGATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGCGATGCGTGC-GGCATAGAAG...................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGC-GGCATAGAAGTCGTCGCCCCCC----------AA...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGACTCGCGATGCGTGC-GGCATA.......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAC-CAT-----------CGATAA-TGTTTGATT..............................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGACTCGCGATGCGT................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGTGACTCGCGATGCG.................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................AGC-G---CGCAGCTGTGAAAA----GCAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGACTCGCGATGCGTGC-GG...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTCGCGATGCGTGC-GGCATAGA.....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCGTGC-GGCATAGAAGTCGTC..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTGAGCAATTTGTGTA...............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATAGAAGTCGTCGCCCCC........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GCGA--------GAAGAGC-G---CGCAGCTGTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGATGCGTGC-GGCATAGAAGTCGTCGC............................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATAGAAGTCGTCGCC...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTAAC-CAT-----------CGATAA-TGTTTGAT...............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGCGTGC-GGCATAGAAGTCGT...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGTCGTCGCCCCCC----------AAAA.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AT------------------------------------------------------------------------------------TTGTTGTTGAGCAATTTGT..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGACTCGCGATGCGTGC-GGC..........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCGTGC-GGCATAGAAGTCGTCGC............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................AGAAAGCGAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------T....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAGTCGTCGCCCCCC----------A............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGC-GGCATAGAAGTCGTC..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGATGCGTGC-GGCATAGAAG...................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.....................C----GCAGT-----CCCGCC---GA------TGTTGT------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATGCGTGC-GGCATAGAAGTCGTCG.............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................AT------------------------------------------------------------------------------------TTGTTGTTGAGCAATTTGTGT................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGC-GGCATAGAAGTCGTCG.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGATGCGTGC-GGCATAGAAGTCGTC..............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATGCGTGC-GGCATAGA.....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GATGAGA----------GAGA--GAG----------------------------------AGGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................C-G---CGCAGCTGTGAAAA----GCAGATGAGA----------...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................AGAGC-G---CGCAGCTGTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGCGATGCGTGC-GGCATA.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................ATTGTAAGCGA--------GAAGAGC-G---.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GTGGAAT------------------------------------------------------------------------------------TTGTTGTTGAGCAATTT....................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGC-GGCATAGAAGTCG................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................TGTAAGCGA--------GAAGAGC-G---CCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................GAAAGCGAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------TTGTTG...............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTCGCGATGCGTGC-GGCATAG......................................2411.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGTCGTCGCCCCCC----------AATC.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AC----GCAGT-----CCCGCC---GA------TGTTGT------TG---------------TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GCAGT-----CCCGCC---GA------TGTTGT------TG---------------TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGTGC-GGCATAGAAGTCG................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA---------AA--------CCCC------------------ATT--------------------------------TTTA-T--TAC.................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................G---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------TTGTTGTT.............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGC-GGCATAGAAGT..................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................AAAA----GCAGATGAGA----------GAGA--GAG----------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGACTCGCGATGCGTGC-GGCATAG......................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTTGAGCAATTTGTG.................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GGAAGAAAGCGAG---------------------------------------------------AGAGT..............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................GA----------GAGA--GAG----------------------------------AGGAAGAAA...........................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
droEre2
GACTGTATAATTACATACACAC----GCAGT-----GCCGCC---GT---TGTTGTTGT------TG---------------TTTCTG----------------TTTTCTTTTTCATTGTAAGCGA--------GAAGAGC-G---CGCAGCTGTGAAAG----------------GCAA--AAGAGA--CAC------------------------AGAGAGAGAGAGGAAG-----------------------------------------------------------AGAGC-GAAT------------------------------------------------------------------------------------TTGTTGTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CTCC------------------ATT--------------------------------TTTA-T--TACCCCT-T-TT----TGCAGTGACTCGCGATGCGTGC-GGCATAGAAGTCGACACCCCCCC---------CAAAAACCG-AAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACTCGCGATGCGTGC-GGCATA.......................................2411.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGCGTGC-GGCATAGAAGT..................................2111.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------CTCC------------------ATT--------------------------------TTTA-T--TACCCCT-T-TT----TGCA................................................................2711.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTCGCGATGCGTGC-GGCATAGAAGT..................................2811.0010000100
.......................................................................................G----------------TTTTCTTTTTCATTGTAAGCGA--------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
droYak3
GACTGTATAATTACATACACAC----GCAGT-----CCCGCCGTTGC------TGTCGTTGTTGTTG---------------TTTCTG----------------TTTTCT-TTTTATTGTAAGCGA--------GGAGAGC-G---CGCAGCTGTGAAAG----------------GCAA--AA------GAG----------------------------------ATGAAGAGAGCGAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------TTGTTGTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------ATT--------------------------------TTTA-T--TACCCCT---TT----TGCAGTGACTCGCGATGCGTGC-GGCATAGAAGTCGGCACCCCCC-----------AAAAACCG-AAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCGTGC-GGCATAGAAGTCGGCACCCC.........................2911.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCGCGATGCGTGC-GGC..........................................1911.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCGCGATGCGTGC-GGCATAGAAGT..................................2711.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................CAATTTGTGTAAC-CAT-----------CGATAA-TGTTTG.................................................................................................................................................................................2811.00101000000000
......................................................................................................................................................................................................................................AAGAGAGCGAG---------------------------------------------------AGAGTGGAAT------------------------------------------------------------------------------------TTGT.................................................................................................................................................................................................................................2511.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCGATGCGTGC-GGCATAGAAGT..................................2511.00100010000000
droEug1
GACTGTATAATTACATACACAT----GCAGT-----CCC------ATTGTTGTTGTTCT------TG---------------TTTGTGGT-----------------------TTTTTGTAAGCGA--------AGAGAGC-G---CGCAGCTGTGATAC------AGAAGAAA-GGCAA--AAGAGA--GAA------------------------AGGG----------AGAGTGTGGC---------------------------------------------------AGAGCGGAAT------------------------------------------------------------------------------------TTGTTTTCGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------GAT--------------------------------TTTT-G--TACCCCT-T-TT----TGCAGTGACTCGCGATGCGTGC-GGCCTAGAAGTCGTCACCCCCCC-C------AAAAAAACCG-AAASizeHit CountTotal NormTotal
No Reads
droBia1
GACTGTATAATTACATACACAC----GCAGC--------GCC---GT------TGTTGT------TG---------------TTTGTGGTTTTCATTTCTTCTTTTTCCC-TTTTTTTGTAAGCA-----------AGAGC-G---CGCAGCTGTGATAC------AGAAGAAA-GGCAA--A-AAGA--G------------------------AGTGCG----------AGAGAGTG------------------------G---------------------GAGTGGGAGAGCGGAAT------------------------------------------------------------------------------------TTGTTTTCGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTAA---------AA--------CCCC------------------ATT--------------------------------TTTT-G--TACC-CT-T-TT----TGCAGTGACTCGCCATGCGTGC-GGCCTAGAAGTCGTCACCCCCCC---------AAAAAACCG-ACASizeHit CountTotal NormTotal
No Reads
droTak1
GACTGTATAATTACATACACAC----GCAGC-----CCCCCC---GT---TATTGTTGT------TG---------------TTTGTGGTTTTCATTTC------TTCCTTTTTTTTTGTAAGCGA-----AGAGGAGAGC-G---CGCAGCTGTGATAC------AGAAGAAA-GGCAA--AAAAGA--G------------------------AGCGCG------------------------------------AGAGAG--------------AG------GAGTGGGAGAGCGGAAT------------------------------------------------------------------------------------TTGTTTTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTAA---------AA--------CCCC------------------ATT--------------------------------TTTT-G--TACCCCT-T-TTTCATTGCAGTGACTCGCGATGCGTGC-GGCCTAGAAGTCGTCACCCCCCC-CT-CGAAAAAAACACCG-AAASizeHit CountTotal NormTotal
No Reads
droEle1
GACTGTATAATTACACACATAC----GCAAT-----CCC-------T------TGTTGT------TG---------------TTTGTGGT----------------------TTTTTTGTAAGCGG-----GAGAGAGAGC-G---CGCAGCTGTGATAC------AGAAA-GA------------------T------------------------------------AGAGAGAG--------------------AGAGAG-----------------------------AGCGCGGAAT------------------------------------------------------------------------------------TTGTTTTTGAGCAATTTGTGTAACCCAT-----------CGATAA-TTTTTGATTTATTTA---------AA--------CCTC---------------G--ATT--------------------------------TTTA-TTGTACCCCT-TTTT----TGCAGTGACTAGCAATGCGTGC-GGCCTAGTAGTCGTAACTCCCGCCCC------CGAGAACCG-AAGSizeHit CountTotal NormTotal
No Reads
droRho1
GACTGTATAATTACATACACACACACGCAGC-----CCC-------T------TGTTGT------TG---------------TTTGTGC--------------------A--TTTTTTGTAAGCGA-----GAGAGAGAGC-G---CGCAGCTGTGATAC------AGAAA-------------------------------------------------------------------GAG---------------------------------------------------AGAGCGGAAT------------------------------------------------------------------------------------TTGTTTTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------ATT--------------------------------TTTA----TACCCCTTT-TT----TGCAGTGACTCGCGATGCGTGC-GGCCTAGAAGTCGTAACCCCCC-----------GAAAACCG-AAGSizeHit CountTotal NormTotal
No Reads
droFic1
GACTGTATAATTACATACACAC----GCAGA--------GCC---GT------TGTTGT------TG---------------TTTGTGGT----------------------TTTTTTGTAAGCGA--------GGAGAGC-G---CGCAGCTGTGATAC------AGAAGAAA-GACGA--AAGAGA--GAG------------------------AAGG----------AGAGAGCG------------------------C---------------------GA---AGAGAGCGGAAT------------------------------------------------------------------------------------GTGTTTTTGAGCAATTTGTGTAAC-CAT-----------CGATAA-TGTTTGATTTATTTA---------AA--------CCCC------------------ATT--------------------------------TTTT-G--TACCCCT-T-TT----TGCAGAGACTCGCGATGCGTGC-GGCCTAGAAGTCGTCACCCCCC-----------TGAAACCGAAAASizeHit CountTotal NormTotal
No Reads
droKik1
GACTGTATAATTACATACACAC----GCAGC--------GTT---GT------TGTTGTTGCTCCCG------CTGTTGTTGTTTGTGGT------------------------TTTTGTAAGC--------------AGC-G---CGCAGCTGTGATAC------AGAAGAAACGGTGA--A-AACGAAGAAAGCGGG----------------AGTGCG------------------------------------AGAGAGGGAGCAGGAGCAGCAGCAGAAGGAGCGGGAGCG----------------ACGGAGAGCACAACAAA-------------------------------------------------------------------GTGATTTCTGTAAC-CATTGAGCACATTTCGATAATTGTTTGATTTATTTTCGAGTCACCAACACCATAATACC------------------ATT--------------------------------CCT------TCGTTT-T-TT----TGCAGTGGCTCGCGATGCGTGC-GGCATAGAAGTCGTCACCCTTCCCCTTT----GGAACCCCG-AACSizeHit CountTotal NormTotal
No Reads
droAna3
GACTGTATAATTACATACACAC----GCAGCAACAACACGCG---GA------TGTTGT------TG---------------T-TGTGGT------------------------TTTTGTAAGCAG--------CGAGAGC-G---CGCAGCTGTGATAC------AGAAGAAA-CGCGGAG--AAAG----------G----------------AGTGTG------------------------------------AGAGAA-----------------------------AGAGTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................AAGCAG--------CGAGAGC-G---CGCAGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
GACTGTATAATTACATACACAC----GCAGCAACAACACGCG---GA------TGTTGT------TG---------------T-TGTGGT------------------------TTTTGTAAGCAG--------CGAGAGC-G---CGCAGCTGTGATAC------AGAAGAAA-CGCGGAG--AAAG----------G----------------AGTGTG------------------------------------AGAGAA-----------------------------AGAGTGGCCT------------------------------------------------------------------------------------CTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
GACTGTATAATTACATACGAGC----GTGCG------------------------------------------------------------------------------------------AGC----------GCAGCGCGG---CGCAGCTGTGATAC------ACA-GAAA-CGCAGAG--CAGGAAGGTGCCAGAACGACGTCGAAAAGAGAGCGC--------------------------------------------------GGGCGGGCAGACAAC------------------GGACAAGGGAGAGAAAACACAACAAAGTTGATGAAAATTTTGGCAGTTTGGGGGAAAAGCTTT--------------------------------------TGTGAA-AAA-----------CG-------ATCGGAGATTG-G---------AG--------TCCAGATAATTTATT-TGTGGCA--TT--------------------------TGCTCTTC-T--T----------TCCATTTTAGTGATGTACGATGCGTGC-GGCATAGAAGCTATAAACCCACC---------------------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGATGCGTGC-GGCAT........................................1811.0010100000000
................ACGAGC----GTGCG------------------------------------------------------------------------------------------AGC----------GCAGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
......ATAATTACATACGAGC----GTGCG------------------------------------------------------------------------------------------AGC----------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
.........................................................................................................................................................................................................................................................................................................................................................GCAGTTTGGGGGAAAA..............................................................................................................................................................................................................................................................1611.0010000000001
.....................................................................................................................................................................................................GAACGACGTCGAAAAGAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
GACTGTATAATTACATACGAGC----GTGCG------------------------------------------------------------------------------------------AGC----------GCAGCGCGG---CGCAGCTGTGATAC------ACA-GAAA-CGCAGAG--CAGGAAGGTGCCAGAACGACGTCGAAAAGAGAGCGC--------------------------------------------------GGGCGGGCAGACAAC------------------GGACAAGGGAGAGAAAACACAACAAAGTTGATGAAAATTTCGGCAGTTTGGGGGAAAAGCTTT--------------------------------------TGTGAA-AAA-----------CG-------ATCGGAGATTG-G---------AG--------TCCAGATAATTTATT-TGTGGCA--TT--------------------------TGCTCTTC-T--T----------TCCATTTTAGTGATGTACGATGCGTGC-GGCATAGAAGCTATAAACCCACC---------------------ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................GACGTCGAAAAGAGAGCGC--------------------------------------------------GGGC.....................................................................................................................................................................................................................................................................................................................................................2312.002200000
..............................................................................................................................................................AC------ACA-GAAA-CGCAGAG--CAGGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--TT--------------------------TGCTCTTC-T--T----------TCCATT...................................................................2011.001001000
.........................................................................................................................................................................................................GACGTCGAAAAGAGAGCGC--------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................1911.001000100
droWil2
GACTGTGTAATTACATACACAC----GTCTC--------AATGTTGT------TTTTGTTGTTGCTG------TTTTTT---TT--------------------TTTCAT-TTTTTTTGTAAGCAGCAGAAGCGAGAGAGC-AAACAGCAGCTGTGAGAT----ACATAGAAAC-CGTAA--G-AAAA--------------------------------------------AAG---------------------------------------------------------AGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............CATACACAC----GTCTC--------AATGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
droVir3
AGA-------------------------------------------------------------------------------------------------------------------------G---------AGAGA---------------------------------------------------GCGAGCGAG----------------AGTGTG------------------------------------AGGGAG-----------------------------AGCACGTAAC----------------------------------------------------------------AAGCAG---------------------------------------------------------------------------------------------------CCAACTTACA-TCAGCCG----------------------------------TTTT-G--CACT-CT-T-CT----GCCTGTGTCTTGCTACCTGTACTCGCACAGCAATAGC-------------------AACAACTA-CAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.GA-------------------------------------------------------------------------------------------------------------------------G---------AGAGA---------------------------------------------------GCGAGCGAG----------------AG..............................................................................................................................................................................................................................................................................................................................................................................................................19200.051000100000000000000000000000000000000000000000000000000000000000
droMoj3
GAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------AAGA----GAG----------------------------------AGAAAGAGAGAGAGAGAGTGAGACAGACTAATCGA-----------------------------CACTGCAGCAGCG------------------------------------------------------ACAAGTTT--------------------------------------TGTGA---------------------------------------------------------------TTGCCTACTTTTTGGCA--CGCCGCTGCTTGCAATCAACGCGCGGCTCGGTCTTGGC--T----------TGGATT------------------TAG-GCCACAGCAGCTGTCTGCCCTG-----------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GTT------------------------------------GTG---GT------TGTTGT------TGTTGTTGTTGTTG---TT-------------------------------GC--TGAGCA-------------------------CGTGTGCTAAACAC--ACA-CACA-AGTAGAG--AG-------------------------------------------AGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGA-----------------------------GAGAGAGGAAACGGAAGATATAGAGA--T----------------------------------------------AAACAGCCAGTTATCATTAAT-----------------TGTTGT-TGT-----------TGAAAG-TGACTGATGTCTGTA---------AA--------TCCA------------------AGA--------------------------------AA---------------------------------------------TGCACTGAAAACATCCCCCCAC-----------ACTCACAC-ACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................AG--AG-------------------------------------------AGAGAGAGAGAGAGAG..................................................................................................................................................................................................................................................................................................................................................................................20200.05110

Generated: 05/18/2015 at 04:33 PM