ID:

dsi_16875

 Coordinate:

4:934201-934350 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.4 -18.0 -18.0

Flybase annnotation

CDS [4_934351_934404_+]; exon [4_934351_934404_+]; intron [4_933620_934350_+]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron-

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCTTTTAGCTTTTATAGTTCGTGAGATCTCAACGTTCATACCTGCGGACAGATGGACAGGCCCAGAATCAAGATGAAGAAAATGATCAAGAATATATAGACTTTATACTTTATATACTGTTACATACTTTTCAACCTATCTAGTAGCAGTATGCTAGTCTACGAGTAACGGGTATAAATATATAAAAATCCTATTTCTAGATTTTGCAACTACAAATGAATGACCATCGTTACCATTATATGTTTACAAC
****************************************************.......((((....((..(((..........)))..)).....((((((..........(((((((((((...................)))))))))))..))))))........)))).....************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 M025
embryo
 M053
female body
 SRR902009
testis
 M024
male body
....................................................TGGACAGGCCCAGAATCAAGATGAAGAA.......................................................................................................................................................................... 28 0 1 20.00 20 10 7 0 3 0 0 0 0 0 0
....................................................TGGACAGGCCCAGAATCAAGATGAAGAAAA........................................................................................................................................................................ 30 0 1 16.00 16 9 4 1 2 0 0 0 0 0 0
.....................TGAGATCTCAACGTTCATACCTGC............................................................................................................................................................................................................. 24 0 1 9.00 9 3 4 2 0 0 0 0 0 0 0
.....................TGAGATCTCAACGTTCATACCTGCG............................................................................................................................................................................................................ 25 0 1 8.00 8 1 5 0 2 0 0 0 0 0 0
....................................................TGGACAGGCCCAGAATCAAGATGAAGAAA......................................................................................................................................................................... 29 0 1 7.00 7 5 2 0 0 0 0 0 0 0 0
.....................TGAGATCTCAACGTTCATACCTGCGGA.......................................................................................................................................................................................................... 27 0 1 7.00 7 5 0 0 1 0 0 0 1 0 0
....................................................TGGACAGGCCCAGAATCAAGATGAAGA........................................................................................................................................................................... 27 0 1 6.00 6 2 2 1 1 0 0 0 0 0 0
....................................................TGGACAGGCCCAGAATCAAGATGA.............................................................................................................................................................................. 24 0 1 4.00 4 1 0 2 0 0 1 0 0 0 0
.....................TGAGATCTCAACGTTCATACCTGCGGACA........................................................................................................................................................................................................ 29 0 1 4.00 4 3 0 0 1 0 0 0 0 0 0
....................................................TGGACAGGCCCAGAATCAAGATGAA............................................................................................................................................................................. 25 0 1 3.00 3 1 0 0 2 0 0 0 0 0 0
.............ATAGTTCGTGAGATCTCAACGTT...................................................................................................................................................................................................................... 23 0 1 3.00 3 0 1 1 0 1 0 0 0 0 0
.....................TGAGATCTCAACGTTCATACCTGCGGAC......................................................................................................................................................................................................... 28 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0
....................................................TGGACAGGCCCAGAATCAAGA................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................................TGCGGACAGATGGACAGGCCCAGAATC..................................................................................................................................................................................... 27 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0
.................................GTTCATACCTGCGGACAGATGGACAGGCC............................................................................................................................................................................................ 29 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0
.......................................................................................................................................................TGCTAGTCTACGAGTAACGGGTATAAA........................................................................ 27 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0
.....................................................................................TCAAGAATATATAGACTTTATACT............................................................................................................................................. 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
......................................TACCTGCGGACAGATGGACAGGCCCA.......................................................................................................................................................................................... 26 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0
..................................................................................TGATCAAGAATATATAGACTTTATACT............................................................................................................................................. 27 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
..................TCGTGAGATCTCAACGTTCATACCTGC............................................................................................................................................................................................................. 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.....TAGCTTTTATAGTTCGTGAGATCTCA........................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TGAATGACCATCGTTACCATTATATGTT...... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TGAATGACCATCGTTACCATTATAA......... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTCTACGAGTAACGGGTATAAATATA.................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................TGAGATCTCAACGTTCATACCTGCGGACT........................................................................................................................................................................................................ 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGACCATCGTTACCATTATATGTT...... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........TTATAGTTCGTGAGATCTCAACGTT...................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTCTACGAGTAACGGGTATAAATA...................................................................... 26 0 2 1.00 2 1 0 0 0 1 0 0 0 0 0
.....................TGAGATCTCAACGTTCATACCTGCGGAA......................................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................TACCTGCGGACAGATGGACAGGCCC........................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
.............ATAGTTCGTTAGATCTCAACGTT...................................................................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TACAAATGAATGACCATCGTTACCATT............. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................TGCGGACAGATGGACAGGCCCAGA........................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................TATATACTGTTACATACTTTTCAAC................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............TATAGTTCGTGAGATCTCAACGTT...................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TAGCGGGTCTAGATATATAAAA............................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................TCAACGTTCATACCTGCGGACAGATGGA.................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................CAGATGGACAGGCCCAGAATCAAGA................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................TAGTAGCAGTATGCTAGTCTACGAG..................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................AAATGAATGACCATCGT.................... 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................TGCTAGTCTACGAGTAACGGGTATAAATA...................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....TTAGCTTTTATAGTTCGTGAGATCTCAA.......................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
......................................TACCTGCGGACAGATGGACAGGCCCAGAATC..................................................................................................................................................................................... 31 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................................................TGGACAGGCCCAGAATCAAGAT................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGACCATCGTTACCATTATATGTTTA.... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............TATAGTTCGTGAGATCTCAACGTTCA.................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................ATGGACAGGCCCAGAATCAAGATGAA............................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................ATGGACAGGCCCAGAATCAAGATGAAGAA.......................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TCTACGAGTAACGGGTATAAATATATA.................................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................CGCAACTACAAATGAATGACCATCGT.................... 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
........................................................CAGGCCCAGAATCAAGATGAAGAAAATGA..................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................AGAAAATGATCAAGAATATATAGACT.................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................AGAAAATGATCAAGAATATATGGACTT................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTCTACGAGTAACGGGTAGTAATG...................................................................... 26 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TAGTCTACGAGTAACGGGT............................................................................. 19 0 7 0.29 2 0 0 0 0 1 1 0 0 0 0
.............................................................................................................................................................TCTACGAGTAACGGGTATA.......................................................................... 19 0 20 0.25 5 2 0 0 0 3 0 0 0 0 0
..........................................................................................................................................................TAGTCTACGAGTAACGGGTATAAA........................................................................ 24 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................TAGTCTACGAGTAACGGGTAT........................................................................... 21 0 7 0.14 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................TCTACGAGTAACGGGTATAAATA...................................................................... 23 0 15 0.13 2 2 0 0 0 0 0 0 0 0 0
............................................................................AGAAAATGATCTAGAATC............................................................................................................................................................ 18 2 12 0.08 1 0 0 0 0 0 0 0 0 0 1
............TATAGTTCATGAGATCTCAACGTT...................................................................................................................................................................................................................... 24 1 16 0.06 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GTCCTATTCCTAGAGTTTG............................................ 19 3 16 0.06 1 0 0 0 0 0 0 0 1 0 0
.....................TGAGATCTCAACGTT...................................................................................................................................................................................................................... 15 0 17 0.06 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................GTAACGGGGCTAAATAT..................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0
.........................ATCTCAACGTTCATA.................................................................................................................................................................................................................. 15 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................TCTACGAGTAACGGG.............................................................................. 15 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
................................................................................AATGATCAAGAATATATATACTTTATA............................................................................................................................................... 27 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

GGAAAATCGAAAATATCAAGCACTCTAGAGTTGCAAGTATGGACGCCTGTCTACCTGTCCGGGTCTTAGTTCTACTTCTTTTACTAGTTCTTATATATCTGAAATATGAAATATATGACAATGTATGAAAAGTTGGATAGATCATCGTCATACGATCAGATGCTCATTGCCCATATTTATATATTTTTAGGATAAAGATCTAAAACGTTGATGTTTACTTACTGGTAGCAATGGTAATATACAAATGTTG
************************************************************************.......((((....((..(((..........)))..)).....((((((..........(((((((((((...................)))))))))))..))))))........)))).....**************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
...........................................................................................................................................................TCAGATGCTCATTGCCCATAT.......................................................................... 21 0 8 0.13 1 0 0 1 0 0 0 0
...............................................................................TTTACTGGTTCTTGTATAT........................................................................................................................................................ 19 2 9 0.11 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................................ATGTCTAATTACTGGTAG...................... 18 2 9 0.11 1 0 0 0 1 0 0 0
......................................................................................................................................................CACAATCAGATGCTCATTGCCCATA........................................................................... 25 2 10 0.10 1 0 1 0 0 0 0 0
GGAAAATCGAAAATAT.......................................................................................................................................................................................................................................... 16 0 10 0.10 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................GGATCTAAAACGTTG........................................ 15 1 11 0.09 1 0 0 0 0 1 0 0
...................................................................................................................TGACAATGTATGAAAA....................................................................................................................... 16 0 16 0.06 1 1 0 0 0 0 0 0
..............................................................................GTTTACTAGTTCTTAT............................................................................................................................................................ 16 1 18 0.06 1 1 0 0 0 0 0 0
................................................................................................................................................................TGCTCATTGCCCATATTT........................................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0
..................AGCACTCTAGCGATGCAAGG.................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 1
................................................................................TTCGTAGTTCTTATATATGTG..................................................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0 0
...AAATCGAAAATATCAA....................................................................................................................................................................................................................................... 16 0 20 0.05 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................CATGTCTAATTACTGGTAG...................... 19 3 20 0.05 1 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 4:934151-934400 + dsi_16875 CC-------TTTTAGCTTTTATAGTTCGTGAGATCTCAACGTTCATACCTGCGG------------AC--------AGA----TGGACAGGCCCAGAATCA---AGATGAAGAAAATGATCAAGAATAT--ATAGACTTTATA---------------CTTTATATACTGTTACATACTT-------TTCAACCTATCTAGTAGCAGTATG--C-------------TAGTC--T----ACGAGTAACGGGTATAAATATATAA---AAATCCTATTTC-T-------AGATTTTGCA---A--------------------------------------------CTA---------------------------------------------------CAAATGAATG-------ACCATC-----GTT----------ACCATTATATG-TTTACAAC
droSec2 scaffold_40:198014-198263 + CC-------TTTTAGCTTTTATAGTTCGTGAGATCTCAACGTTCATACCTGCGG------------AC--------AGA----TGGACAGGCCCAGAATCA---AGATGAATAAAATGATCAAGAATAT--ATAGACTTTATA---------------CTTTATATACTGTTACATACTT-------TTCAACCTATCTAGTAGGAGTATG--C-------------TAGTC--T----ACGAGTAACGGGTATAAATATATAA---AAATCCTATTTC-T-------AGATTTTGCA---A--------------------------------------------CTA---------------------------------------------------CAAATGAATG-------ACCATC-----GTT----------ACCATTATATG-TTTACAAC
dm3 chr4:1149875-1150110 + CA-------TATTAACTTTTATAGTTC--GAGATCTGAACATTTATATCTGCGG------------AC--------AGA----TGGACACGCCCAGAATAA---AGATGAAGAAAATGATCAAGAATAT--AT--ACTTTATA---------------CTTTATATACTATTACATACTT-------TTCAACGTATCTAGTAGG-------------------------AG--T----ACGAGTAACTGGTATAAATATATAA---ATATCCTATTTC-T-------AGATTTTGCA---A--------------------------------------------CTA---------------------------------------------------CAAATGAATG-------ACCATC-----GTT----------ACCATTATATG-TTTACAAC
droEre2 scaffold_4793:36212-36451 - CA-------TTCTAGCTTTTGTAGTTCCTGATTTCGAGGCGTTCATACG----G------------AC--------AGA----CGGACATGGCCAGATCAACTCGGATATTGCCCTTGATCAAGAATAT--A--TACTTTATATGGTCGGAAACGTTTCCTTGTG-CCTGTTACATACTT-------TTCAACGAATCTAGTATA-CCCTT--T-------------TACTC--T----ACGAGTAACTGGTATAATGTTGAAA--------CTATGCCTTGAATTTCAGAAAT---------------------------------------------------------------------------------------------------------------------------TTTATT-----GTT----------GTAATTATATG-TTT-----
droYak3 v2_chrX_random_058:25921-26182 + CT-------TTCTAGCTGTTGTAGTTCCTGAGATCTCGACGTTCATACGGACAG------------AC--------AGACGGACGGACATGGCCAAATCGACTCTGCTATTGATCCTGATCAAGAATAT--ATAT---------GGTCGGAAACGCTTCCTTCTG-CCTGTTACATACTT-------TTAAACGAATCTAGTATA-CCCTT--T-------------TACTC--T----ACGAGTAACGGGTATAAATACAGCA--------AAAAATG-------------------CCA---A-------------------------CTCGG-----------TTA-------------------GA----------AA------------T-----GAATGTAACTATCAGTGACCGAC-----GTC----------ACAA--AAATG-TTTACA-G
droEug1 scf7180000409801:491044-491309 + CT-------TTGTATCTCTTATTGTTCCTGAGATCTCAGCGTTCATACAGACAG------------AC--------AGA----CGGACATGGCTTAATCGTTTTCGCTATTGATCCTGATCAAGAATAT--ATATACTTTATAGGGTCGGAAA-------------CCTGTTACATACTT-------TTCAACGAATCTAATGTA-CTCTT--T-------------TACTC--T----ACGAGTAACGGGTATAAAAGGTTAA---GGATTAAATTGG-------------------TCA---A--------------------TAGGTTT-----C--------GAT------------------------------------TTGCCGAAACTTTTTCAAATGA--G-------AACATT-----TTT----------TAAATTATTTA-TTAACA-A
droBia1 scf7180000302052:12828-13099 + TG-------TCCTACCTCTTATAGTTTCCGAAATCTCAGCGTTCATACGGACGG------------AC--------GGACAGACGGTCATGGCTAGATCGACTCGGCTAGTGATCCTCATCAAGAATAT--ATAGACTTTATGTGGACGGAAACGGCTTCTTTTA-CATGTTACATACTA-------CCCGACGAACCTAGTATA-CCCTT----------------TACTC--T----ACAAATAACGTGTATAATTATAAAT---AC-----ATACCT--------------------------------------ACATCAATAGCCATACATATTATAA---ATA---------------------T-------ACATTCA---------------TACATAAAT--------------------------------A-CATCATACA-T---CAAC
droTak1 scf7180000415156:66885-67153 + CC-------TTCTAGCTTTTGTAGTTTCCAAGATCTCAGCGTTCATACAGACAG------------AC--------AGA----CGGACATGGCTAGATTGACTCGGCTAGTGATCCTGATCAAGAATAT--ATATAGTTTATAGGGTCGGAAACGCTTCCTTCTA-CCTGTTACATACTT-------TTGCACGAATCTAATATA-CCCTT--T-------------TACTC--T----ACGAGTAACGGGTATAAATATATAA-------GCTATTTG-A-----------------AAA---AT-------------------------CTTTTAT--------CTA---------------------------------------------------AAAATTAATG-------GTCATGTTAATGTT----------AAAATTAACTGTTATAAAGC
droEle1 scf7180000490750:29269-29542 - TC-------CGAAAGCTTTTGAAGTTTCCGAAATCTCGTCGTTCATACGGTCGG------------AC--------AGACAGTTGGACATTGCTAAATCGATTCGTCTTTTGATCCTGATCCAA---------------------------AACGCTTCTTTCTT-TCTGTAACAAACTT-------TTAAGCGTATACAATATA-CCCTT--T-------------TACTC--T----ACGATTAAGGGGTATAACTAGATGA---AGCTTA--------------------TTAAA---A--ATATTATAAA----------------ATTTTTGTTTTTATACCTAAAGATATTTAACCATTCCACA------------------------------CTGGGCGAAA-------TA-----------A----------ACCATATTATC-TTCATACA
droRho1 scf7180000761994:44461-44734 + TC-------TTCTAGCTTTTATAGTTTCCGAGATCTCAGCGTTCATACGGACGG------------AC--------TGA----CGGACATGGCTATATCGACTCGGCTAGTGACCCTGATCAAGAATAT--ATATACTTTATAGGGTCGGAAACGCTTCCTTCTA-CCTGTTACATACTT-------TTGCACGAATACAATATA-CCCTT--T-------------TACTC--T----ACGAGTAACGGGTATAATCATAAATTTCATTTCTTTTTTC-T-------GAATTGTGGA---TCT--------------AG-----TGACGACTGATAGTTCGA---CTG---------------------------------------------------TACAT---T--------------------------------A-AATAATAAA----AAATC
droFic1 scf7180000454059:265168-265422 + TT---------TTAACTCTTAAAGTTCCCGAAAACTCGACGTTCATATGGATGG------------AC--------AGA----TAGACAGGCATA--------------AAGATATGGATCGAACATATTCATATACTTTATGAAATCGCAAGTGGTTCCTTCGA-CTTGTTACATTAAA-------TACATTATATACAATATA-CAATAATGTATACAATACAACTACTC--T----ATAAGTAACGGGTATAAATATTG-------------TTAT-T-------AGATATTTC-------------------------------------------------TTA---------------------------------------------------CTAGTAAATA-------TAAGTC-----AGT----------CCCTTTCCATT-CATGCAAA
droKik1 scf7180000302543:13404-13471 + TA-------TAA--------------------------------------------------------------------------------------------------------------------------------------------ATATATTTTTTTA-GATATTACA------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------CAA---------------------------------------------------CAAATGAATG-------AATATA-----AAT----------ACCATTATTT--TTTACCAG
droAna3 scaffold_13228:292427-292530 - CT-------CAATAGCTTTAAAACTGAGAGACAAGTTTTCGTAGAAACAGACAG------------AC--------AGA----CGGACATGCTCTTATCGACTCTGG------AGGTGATCAAGAATAT--ATATACTTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396710:187113-187277 + GT-------CTTTATCTCTTATAGTCTGTGAGATCCACGCGTTCATACATACTC------------AC--------AGA----CGAACATGGCTATATCGACTCGGCTGTTGATGCTGATCAAGAATGT--ATATACTTTATGGGGTCGGAGTT------------------ACA-------------------TCTACAACATA-CCTTT--G-------------TACTC--T----ACTAATACCGAGTATAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_singleton_2012:8970-9254 + TG-------CTCTAGCTCTTATAGTCCTTGAGCACTAGGCGCTAATAGGGACTGACAGA----CGGACGGACGGACAGA----CAGACAGGGCTCAATTGACTCGGATATTGATGCTGATCAAGAATAT--ATATACTTTATGGGGTCGGAAACGATTCCTTCTG-GACGTTACACACATCCACTTTTACCACAAATCTAATATA-TGTAT--GT----AG------CACTCATT----TTGAGTATCGGGTATAAAAACCTAC---T-----------------------------------------------------ATTCAACCCTTTTA---------------------------------CACACATTTTGCAT------------------GGATTATATG-------AACATT-----TTT----------ACAGTCAT------------
droPer2 scaffold_14:1264986-1265226 - TG-------CTCTAGCTTGTATAGTCTTTGAGCACTAGGCGCTGATAGGGACGG------------ACAGACGGACAGA----CAGACAGGGCTCAATCGACTCGGCTGTTGATGCTGATCAAGAATAT--ATATACTTTATGGGGTCGGAAACGATTCCTTCTG-GACGTTACACACATCCATTTTCACCACAAATCTAATATA-CCCCA--A-------------TACTCATT----TTGAGTATCGGGTATAAAAACAC---------CCAATTTG-T-----------------CAA---AT-------------------------TTTC-GCAA------CC----------------------------------------------------------------------------------------------------------------A
droWil2 scf2_1100000004963:416369-416645 - ATTTGTTGGCTCTAGCTTTTACAGTCTCCGCGATCTAGGTGTTCATACGGACGG------------AC--------AGA----CGGACATGGCTAGATCGACTCAACTGTTGTTCCTGATCAAGAATAT--ATAAACTTTATGGGGTCGGAGAAGCTTCCTTCTG-CCTGTTACATACAT-------TTTGGCCACTTTAATATA-CCATT--T-------------CACCC--T----ATGGGTGTATGGTATAAAAATAT--------------TTG-A-----------------AAA---ATATCAAAGAAGCTA---------CCTTATTTAATTTAATACCT---------------------------------------------------------------------------------TTGCAGTCCTTGGCCATTATATG-TTTACA--
droVir3 scaffold_13052:623302-623599 + GT-------CTCTAGCTCTTATAGATTCTGAGATCCTTGCGTTCATACATACGGACAGA----CGGACAGACAGACAGA----CGGACATGGCTAGATCGTGCTGA---TTGGTGCTGATCAAGAATAT--ATATACTTTATGGGGTTTGAGATGCTTCCTTATG-TCTGTTACAAACATTTGGTTTTTGCACAAATACAATATA-CCCTT--A-------------TACCCATTTTTAATGGGTTCAAGGTATAAAGGTATAA---AAA-G--GTATCT--------------------------------------AGTATATAATACTTATATAATATAATAT---------------------------------------------------------ATC-ATG-------ATATAC-----ATT----------ATTA-TATATG-TATATAAT
droMoj3 scaffold_6500:14205295-14205553 - GT-------CTCTAGCTCTTATATCTACTGAAATCGACGCGTTCATACATACGG------------AC--------AGA----CGGACAGGGCCAAATCAACTCAGCTCGTCACCCTGATCAAGAATAT--ATATACTTTGTGGGGTCTGCCACGCCTCCTTCTC-CCTGTTACATACAT-------TTCAACAAAACCATTATA-CCCTGATTT--------------CCCATTGAAAATGGGTTCAGGGTATAAAAAAGT--------------TAA-T-------GTTTTTCGCA---A--------------------------------------------ATA---------------------------------------------------AAAAAAAAAT-------ATTATT------------------TTTGTTAAATT-TTTTAAAC
droGri2 scaffold_14824:7825-8117 + GT-------CTCTAGCTTTCATAGTCTCTGAGATCTACGTGCTCATACAGACCGATGGATGGTCGGACGCACGGACAGA----CGGACATGGCTATATCGACTCGGCTGTTGACCCTGATCAATAATAT--ATATACTTTATGGGGACGGAGATGCTTCTTTCTG-CCTGTTACATACAT-------TTGCATAAAACCATTATA-CCCTTTAA-------------TGATCAA-----CTGTGTATTGGAAGTAATTAGA--------GTCAAATCTA-------------------ACA---A-------------------------TTTTTTAA--------TAT---------------------------------------------------TATACTAATTACTACCGGCTCA----TTTTT----------TGTGCTAATTATTTTATAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CC-------TTTTAGCTTTTATAGTTCGTGAGATCTCAACGTTCATACCTGCGG------------AC--------AGA----TGGACAGGCCCAGAATCA---AGATGAAGAAAATGATCAAGAATAT--ATAGACTTTATA---------------CTTTATATACTGTTACATACTT-------TTCAACCTATCTAGTAGCAGTATG--C-------------TAGTC--T----ACGAGTAACGGGTATAAATATATAA---AAATCCTATTTC-T-------AGATTTTGCA---A--------------------------------------------CTA---------------------------------------------------CAAATGAATG-------ACCATC-----GTT----------ACCATTATATG-TTTACAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................TGGACAGGCCCAGAATCA---AGATGAAGAA...........................................................................................................................................................................................................................................................................................................................................................28120.0020000000731000000000
...................................................................................TGGACAGGCCCAGAATCA---AGATGAAGAAAA.........................................................................................................................................................................................................................................................................................................................................................30116.001600000042910000000
............................TGAGATCTCAACGTTCATACCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2419.00900000040320000000
............................TGAGATCTCAACGTTCATACCTGCG........................................................................................................................................................................................................................................................................................................................................................................................................................2518.00800000052100000000
...................................................................................TGGACAGGCCCAGAATCA---AGATGAAGAAA..........................................................................................................................................................................................................................................................................................................................................................2917.00700000020500000000
............................TGAGATCTCAACGTTCATACCTGCGG------------A..........................................................................................................................................................................................................................................................................................................................................................................................................2717.00700010001500000000
...................................................................................TGGACAGGCCCAGAATCA---AGATGAAGA............................................................................................................................................................................................................................................................................................................................................................2716.00600000021210000000
...................................................................................TGGACAGGCCCAGAATCA---AGATGA...............................................................................................................................................................................................................................................................................................................................................................2414.00400000000120010000
............................TGAGATCTCAACGTTCATACCTGCGG------------AC--------A................................................................................................................................................................................................................................................................................................................................................................................................2914.00400000001300000000
...................................................................................TGGACAGGCCCAGAATCA---AGATGAA..............................................................................................................................................................................................................................................................................................................................................................2513.00300000002100000000
....................ATAGTTCGTGAGATCTCAACGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00300000010011000000
............................TGAGATCTCAACGTTCATACCTGCGG------------AC--------.................................................................................................................................................................................................................................................................................................................................................................................................2813.00300000000210000000
...................................................................................TGGACAGGCCCAGAATCA---AGA..................................................................................................................................................................................................................................................................................................................................................................2112.00200000000200000000
.................................................TGCGG------------AC--------AGA----TGGACAGGCCCAGAATC.........................................................................................................................................................................................................................................................................................................................................................................2712.00200000001100000000
........................................GTTCATACCTGCGG------------AC--------AGA----TGGACAGGCC................................................................................................................................................................................................................................................................................................................................................................................2912.00200200000000000000
.................................................................................................................................................................................................................TG--C-------------TAGTC--T----ACGAGTAACGGGTATAAA............................................................................................................................................................................................................2712.00200000010010000000
.......................................................................................................................TCAAGAATAT--ATAGACTTTATA---------------CT.............................................................................................................................................................................................................................................................................................................2412.00200000020000000000
.............................................TACCTGCGG------------AC--------AGA----TGGACAGGCCCA..............................................................................................................................................................................................................................................................................................................................................................................2612.00200000000000020000
....................................................................................................................TGATCAAGAATAT--ATAGACTTTATA---------------CT.............................................................................................................................................................................................................................................................................................................2712.00200000000110000000
.........................TCGTGAGATCTCAACGTTCATACCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000020000000
............TAGCTTTTATAGTTCGTGAGATCTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGAATG-------ACCATC-----GTT----------ACCATTATATG-TT......2811.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGAATG-------ACCATC-----GTT----------ACCATTATAA..........2511.00100000000100000000
...................................................................................................................................................................................................................................TAGTC--T----ACGAGTAACGGGTATAAATATA........................................................................................................................................................................................................2811.00100000010000000000
............................TGAGATCTCAACGTTCATACCTGCGG------------AC--------T................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TG-------ACCATC-----GTT----------ACCATTATATG-TT......2411.00100000000010000000
..................TTATAGTTCGTGAGATCTCAACGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...................................................................................................................................................................................................................................TAGTC--T----ACGAGTAACGGGTATAAATA..........................................................................................................................................................................................................2621.00200000000101000000
............................TGAGATCTCAACGTTCATACCTGCGG------------AA--------.................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
.............................................TACCTGCGG------------AC--------AGA----TGGACAGGCCC...............................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------------------CAAATGAATG-------ACCATC-----GTT----------ACCATT..............2711.00100000000100000000
.................................................TGCGG------------AC--------AGA----TGGACAGGCCCAGA............................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
.................................................................................................................................................................TATATACTGTTACATACTT-------TTCAAC............................................................................................................................................................................................................................................................................2511.00100000000010000000
...................TATAGTTCGTGAGATCTCAACGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
...................................TCAACGTTCATACCTGCGG------------AC--------AGA----TGGA......................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...................................................................C--------AGA----TGGACAGGCCCAGAATCA---AGA..................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
......................................................................................................................................................................................................TAGTAGCAGTATG--C-------------TAGTC--T----ACGAG.........................................................................................................................................................................................................................2511.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AAATGAATG-------ACCATC-----GT...............................1711.00100000001000000000
.................................................................................................................................................................................................................TG--C-------------TAGTC--T----ACGAGTAACGGGTATAAATA..........................................................................................................................................................................................................2911.00100000000100000000
...........TTAGCTTTTATAGTTCGTGAGATCTCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
.............................................TACCTGCGG------------AC--------AGA----TGGACAGGCCCAGAATC.........................................................................................................................................................................................................................................................................................................................................................................3111.00100000001000000000
...................................................................................TGGACAGGCCCAGAATCA---AGAT.................................................................................................................................................................................................................................................................................................................................................................2211.00100000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TG-------ACCATC-----GTT----------ACCATTATATG-TTTA....2611.00100000000100000000
...................TATAGTTCGTGAGATCTCAACGTTCA................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
..............................................................................A----TGGACAGGCCCAGAATCA---AGATGAA..............................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
..............................................................................A----TGGACAGGCCCAGAATCA---AGATGAAGAA...........................................................................................................................................................................................................................................................................................................................................................2911.00100000000100000000
......................................................................................................................................................................................................................................TC--T----ACGAGTAACGGGTATAAATATATA......................................................................................................................................................................................................2711.00100000000001000000
.......................................................................................CAGGCCCAGAATCA---AGATGAAGAAAATGA......................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
..............................................................................................................AGAAAATGATCAAGAATAT--ATAGACT...................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
...................................................................................................................................................................................................................................TAGTC--T----ACGAGTAACGGGT.................................................................................................................................................................................................................1970.29200000000001010000
......................................................................................................................................................................................................................................TC--T----ACGAGTAACGGGTATA..............................................................................................................................................................................................................19200.25500000000203000000
...................................................................................................................................................................................................................................TAGTC--T----ACGAGTAACGGGTATAAA............................................................................................................................................................................................................2450.20100000000001000000
...................................................................................................................................................................................................................................TAGTC--T----ACGAGTAACGGGTAT...............................................................................................................................................................................................................2170.14100000000001000000
......................................................................................................................................................................................................................................TC--T----ACGAGTAACGGGTATAAATA..........................................................................................................................................................................................................23150.13200000000200000000
............................TGAGATCTCAACGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................15170.06100000000100000000
................................ATCTCAACGTTCATA..............................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
......................................................................................................................................................................................................................................TC--T----ACGAGTAACGGG..................................................................................................................................................................................................................15200.05100000000010000000
droSec2
CC-------TTTTAGCTTTTATAGTTCGTGAGATCTCAACGTTCATACCTGCGG------------AC--------AGA----TGGACAGGCCCAGAATCA---AGATGAATAAAATGATCAAGAATAT--ATAGACTTTATA---------------CTTTATATACTGTTACATACTT-------TTCAACCTATCTAGTAGGAGTATG--C-------------TAGTC--T----ACGAGTAACGGGTATAAATATATAA---AAATCCTATTTC-T-------AGATTTTGCA---A--------------------------------------------CTA---------------------------------------------------CAAATGAATG-------ACCATC-----GTT----------ACCATTATATG-TTTACAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................A---A--------------------------------------------CTA---------------------------------------------------CAAATGAATG-------ACCATC-----.................................2111.0010010
..................................................................................................................................................................................................TATCTAGTAGGAGTATG--C-------------TAGTC--T----ACGA..........................................................................................................................................................................................................................2811.0011000
....................ATAGTTCGTGAGATCTCAACGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
dm3
CA-------TATTAACTTTTATAGTTC--GAGATCTGAACATTTATATCTGCGG------------AC--------AGA----TGGACACGCCCAGAATAA---AGATGAAGAAAATGATCAAGAATAT--AT--ACTTTATA---------------CTTTATATACTATTACATACTT-------TTCAACGTATCTAGTAGG-------------------------AG--T----ACGAGTAACTGGTATAAATATATAA---ATATCCTATTTC-T-------AGATTTTGCA---A--------------------------------------------CTA---------------------------------------------------CAAATGAATG-------ACCATC-----GTT----------ACCATTATATG-TTTACAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................TGCA---A--------------------------------------------CTA---------------------------------------------------CAAATGAATG-------ACCATC-----GT...............................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................TTTGCA---A--------------------------------------------CTA---------------------------------------------------CAAATGAATG-------ACCATC-----GT...............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................T-------TTCAACGTATCTAGTAGG-------------------------AG--T----ACGAGT........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................C--GAGATCTGAACATTTATATCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GAATG-------ACCATC-----GTT----------ACCATTAT............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TTGCA---A--------------------------------------------CTA---------------------------------------------------CAAATGAATG-------ACCATC-----G................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................AATGAATG-------ACCATC-----GTT----------ACCATTATA...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................G-------ACCATC-----GTT----------ACCATTATATG-TTTACAAC2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CAAGAATAT--AT--ACTTTATA---------------CTTTAT.........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AAATGAATG-------ACCATC-----GTT----------ACC.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................GCA---A--------------------------------------------CTA---------------------------------------------------CAAATGAATG-------ACCATC-----GT...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TTTATATCTGCGG------------AC--------AGA----TGGACACG..................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................ATGAAGAAAATGATCAAGAAT..............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................CA---A--------------------------------------------CTA---------------------------------------------------CAAATGAATG-------ACCATC-----GT...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................CTAGTAGG-------------------------AG--T----ACGAGTAACT....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................................................................................TTACATACTT-------TTCAACGTAT........................................................................................................................................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TGATCAAGAATAT--AT--ACTTTAT...............................................................................................................................................................................................................................................................................................................................2270.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CTATTACATACTT-------TTCAACG...........................................................................................................................................................................................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................AAGAATAT--AT--ACTTTATA---------------...............................................................................................................................................................................................................................................................................................................18120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CA-------TTCTAGCTTTTGTAGTTCCTGATTTCGAGGCGTTCATACG----G------------AC--------AGA----CGGACATGGCCAGATCAACTCGGATATTGCCCTTGATCAAGAATAT--A--TACTTTATATGGTCGGAAACGTTTCCTTGTG-CCTGTTACATACTT-------TTCAACGAATCTAGTATA-CCCTT--T-------------TACTC--T----ACGAGTAACTGGTATAATGTTGAAA--------CTATGCCTTGAATTTCAGAAAT---------------------------------------------------------------------------------------------------------------------------TTTATT-----GTT----------GTAATTATATG-TTT-----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................TATGCCTTGAATTTCAGAAAT---------------------------------------------------------------------------------------------------------------------------TTTATT-----.................................2711.0011000000
..........................................TCATACG----G------------AC--------AGA----CGGACATGGCCAGAT...........................................................................................................................................................................................................................................................................................................................................................................28200.1530000003
..................................................................AC--------AGA----CGGACATGGCCAGATC..........................................................................................................................................................................................................................................................................................................................................................................21200.0510000100
droYak3
CT-------TTCTAGCTGTTGTAGTTCCTGAGATCTCGACGTTCATACGGACAG------------AC--------AGACGGACGGACATGGCCAAATCGACTCTGCTATTGATCCTGATCAAGAATAT--ATAT---------GGTCGGAAACGCTTCCTTCTG-CCTGTTACATACTT-------TTAAACGAATCTAGTATA-CCCTT--T-------------TACTC--T----ACGAGTAACGGGTATAAATACAGCA--------AAAAATG-------------------CCA---A-------------------------CTCGG-----------TTA-------------------GA----------AA------------T-----GAATGTAACTATCAGTGACCGAC-----GTC----------ACAA--AAATG-TTTACA-GSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................TA-------------------GA----------AA------------T-----GAATGTAACTATCAGTGACC.........................................2722.50504100000000
.........................................................................................TGGCCAAATCGACTCTGCTATTGATCC.........................................................................................................................................................................................................................................................................................................................................................2712.00202000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T-----GAATGTAACTATCAGTGACCGAC-----G................................2521.50303000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................T-----GAATGTAACTATCAGTGACCGAC-----GTC----------....................2721.50303000000000
.........TTCTAGCTGTTGTAGTTCCTGAGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................26141.1416030000000013
....................................................................................................................................................................................................................................................................................................................................................................................................................GTAACTATCAGTGACCGAC-----GTC----------ACAA--A.............2711.00101000000000
.....................................................................................................................................................................................................................................................................................TG-------------------CCA---A-------------------------CTCGG-----------TTA-------------------GA----------AA------------T-----GAATGTAAC....................................................2821.00202000000000
.............................................................................................................................................................................................................................................................TAAATACAGCA--------AAAAATG-------------------CCA---A-------------------------CTCGG-----------T..................................................................................................................2821.00202000000000
.........................................................................................TGGCCAAATCGACTCTGCTAT...............................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.............................................................................................................................................................................................................................................................TAAATACAGCA--------AAAAATG-------------------CCA---A-------------------------CTCGG-----------...................................................................................................................2721.00202000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACTATCAGTGACCGAC-----GTC----------ACA.................2621.00202000000000
.....................................................................................................................................................................................................................................................................................TG-------------------CCA---A-------------------------CTCGG-----------TTA-------------------GA----------AA------------T-----GAATGT.......................................................2521.00202000000000
.............................................................................................CAAATCGACTCTGCTATTGA............................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
........................................................................................ATGGCCAAATCGACTCTGCTATTGATCC.........................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
..........TCTAGCTGTTGTAGTTCCTGAGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................25140.8612001000000011
..................TTGTAGTTCCTGAGATCTCGACGTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................26200.6012012000000000
.................................................................................................................................................................................................................................................................TACAGCA--------AAAAATG-------------------CCA---A-------------------------CTCGG-----------T..................................................................................................................2420.50101000000000
.................................................................................................................................................................................................................................................................TACAGCA--------AAAAATG-------------------CCA---A-------------------------CTCGG-----------TTA-------------------G............................................................................................2720.50100010000000
..........................................................................................................................................................................................................................................................................................................................................................TTA-------------------GA----------AA------------T-----GAATGTAACTATCAGT.............................................2420.50101000000000
.................................................................................................................................................................................................................................................................TACAGCA--------AAAAATG-------------------CCA---A-------------------------CTCGG-----------TTA-------------------.............................................................................................2620.50100100000000
...........................................................................................................................................................................................................................................................TATAAATACAGCA--------AAAAATG-------------------CCA---A-------------------------CT.................................................................................................................................2620.50101000000000
................................................................................................................................................................................................................................................................................................................................................................................GA----------AA------------T-----GAATGTAACTATCAGTGACC.........................................2520.50101000000000
.................................................................................................................................................................................................................................................................TACAGCA--------AAAAATG-------------------CCA---A-------------------------CTCGG-----------TTA-------------------GA----------.................................................................................2820.50101000000000
..............................................................................................................................................................................................................................................................AAATACAGCA--------AAAAATG-------------------CCA---A-------------------------CTCGG-----------...................................................................................................................2620.50101000000000
...........................................................................................................................................................................................................................................................TATAAATACAGCA--------AAAAATG-------------------CCA---A-------------------------C..................................................................................................................................2520.50101000000000
............TAGCTGTTGTAGTTCCTGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................21140.50700000000007
.............................................TACGGACAG------------AC--------AGACGGACGGACATGGCCA..............................................................................................................................................................................................................................................................................................................................................................................30200.35700000000007
.....................................................G------------AC--------AGACGGACGGACATGGCCAAATCGAC.......................................................................................................................................................................................................................................................................................................................................................................29200.35700000000007
.............................................................................GACGGACGGACATGGCCAAATCGAC.......................................................................................................................................................................................................................................................................................................................................................................25200.35707000000000
.............................................................................................CAAATCGACTCTGCTATTGATCCTGAA.....................................................................................................................................................................................................................................................................................................................................................2750.20101000000000
...................................................................................................................................................................................................ATCTAGTATA-CCCTT--T-------------TACTC--T----ACGAG.........................................................................................................................................................................................................................27200.20404000000000
.......................................................................................................................................................................................................................................C--T----ACGAGTAACGGGTATAAATACAGCA--------.............................................................................................................................................................................................2760.17101000000000
.........TTCTAGCTGTTGTAGTTCCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................21140.14202000000000
................TGTTGTAGTTCCTGAGATCTCGACGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................2780.13100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TATCAGTGACCGAC-----GTC----------ACAA--AAA...........2480.13101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TATCAGTGACCGAC-----GTC----------ACAA--AAATG-........2680.13101000000000
CT-------TTCTAGCTGTTGTAGTTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.10101000000000
.....................................................G------------AC--------AGACGGACGGACATGGCCAAATC..........................................................................................................................................................................................................................................................................................................................................................................26200.10202000000000
..............................................................................ACGGACGGACATGGCCAAATCGAC.......................................................................................................................................................................................................................................................................................................................................................................24200.10202000000000
.........................................TTCATACGGACAG------------AC--------AGACGGACGGAC.....................................................................................................................................................................................................................................................................................................................................................................................27200.10202000000000
.............................................................................GACGGACGGACATGGCCAAATCGA........................................................................................................................................................................................................................................................................................................................................................................24200.10202000000000
.............................................................................GACGGACGGACATGGCCAAATCGACT......................................................................................................................................................................................................................................................................................................................................................................26200.10201100000000
.............................................................................GACGGACGGACATGGCCAAATCGACTC.....................................................................................................................................................................................................................................................................................................................................................................27200.10202000000000
.T-------TTCTAGCTGTTGTAGTTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.08101000000000
..........TCTAGCTGTTGTAGTTCCTGAGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................26140.07101000000000
.............AGCTGTTGTAGTTCCTGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................20140.07101000000000
.........TTCTAGCTGTTGTAGTTCCTGAGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................27140.07101000000000
..............GCTGTTGTAGTTCCTGAGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................21140.07101000000000
..........TCTAGCTGTTGTAGTTCCTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................21140.07101000000000
......................................................................................................TCTGCTATTGATCCTGATCAAGA................................................................................................................................................................................................................................................................................................................................................23160.06101000000000
...............................................................................................................................................................................TACTT-------TTAAACGAATCTAGTATA-CCC............................................................................................................................................................................................................................................................26200.05101000000000
...........................................CATACGGACAG------------AC--------AGACGGACGG.......................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
................................................................................GGACGGACATGGCCAAATCG.........................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
.........................TCCTGAGATCTCGACGTTCATAC.............................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
...................................................CAG------------AC--------AGACGGACGGACATGGCC...............................................................................................................................................................................................................................................................................................................................................................................23200.05100100000000
................................................................................................................................T--ATAT---------GGTCGGAAACGCTTCCT............................................................................................................................................................................................................................................................................................................22200.05100000010000
...............................................CGGACAG------------AC--------AGACGGACGGACATG..................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
...................................................................................................................................................................................................................................TACTC--T----ACGAGTAACGGGTATAAATAC.........................................................................................................................................................................................................27200.05100100000000
.............................................................................GACGGACGGACATGGCCAAATC..........................................................................................................................................................................................................................................................................................................................................................................22200.05100000000001
........................................GTTCATACGGACAG------------AC--------AGACGGACGGAC.....................................................................................................................................................................................................................................................................................................................................................................................28200.05100100000000
.....................................................G------------AC--------AGACGGACGGACATGGC................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
droEug1
CT-------TTGTATCTCTTATTGTTCCTGAGATCTCAGCGTTCATACAGACAG------------AC--------AGA----CGGACATGGCTTAATCGTTTTCGCTATTGATCCTGATCAAGAATAT--ATATACTTTATAGGGTCGGAAA-------------CCTGTTACATACTT-------TTCAACGAATCTAATGTA-CTCTT--T-------------TACTC--T----ACGAGTAACGGGTATAAAAGGTTAA---GGATTAAATTGG-------------------TCA---A--------------------TAGGTTT-----C--------GAT------------------------------------TTGCCGAAACTTTTTCAAATGA--G-------AACATT-----TTT----------TAAATTATTTA-TTAACA-ASizeHit CountTotal NormTotal
No Reads
droBia1
TG-------TCCTACCTCTTATAGTTTCCGAAATCTCAGCGTTCATACGGACGG------------AC--------GGACAGACGGTCATGGCTAGATCGACTCGGCTAGTGATCCTCATCAAGAATAT--ATAGACTTTATGTGGACGGAAACGGCTTCTTTTA-CATGTTACATACTA-------CCCGACGAACCTAGTATA-CCCTT----------------TACTC--T----ACAAATAACGTGTATAATTATAAAT---AC-----ATACCT--------------------------------------ACATCAATAGCCATACATATTATAA---ATA---------------------T-------ACATTCA---------------TACATAAAT--------------------------------A-CATCATACA-T---CAACSizeHit CountTotal NormTotal
No Reads
droTak1
CC-------TTCTAGCTTTTGTAGTTTCCAAGATCTCAGCGTTCATACAGACAG------------AC--------AGA----CGGACATGGCTAGATTGACTCGGCTAGTGATCCTGATCAAGAATAT--ATATAGTTTATAGGGTCGGAAACGCTTCCTTCTA-CCTGTTACATACTT-------TTGCACGAATCTAATATA-CCCTT--T-------------TACTC--T----ACGAGTAACGGGTATAAATATATAA-------GCTATTTG-A-----------------AAA---AT-------------------------CTTTTAT--------CTA---------------------------------------------------AAAATTAATG-------GTCATGTTAATGTT----------AAAATTAACTGTTATAAAGCSizeHit CountTotal NormTotal
No Reads
droEle1
TC-------CGAAAGCTTTTGAAGTTTCCGAAATCTCGTCGTTCATACGGTCGG------------AC--------AGACAGTTGGACATTGCTAAATCGATTCGTCTTTTGATCCTGATCCAA---------------------------AACGCTTCTTTCTT-TCTGTAACAAACTT-------TTAAGCGTATACAATATA-CCCTT--T-------------TACTC--T----ACGATTAAGGGGTATAACTAGATGA---AGCTTA--------------------TTAAA---A--ATATTATAAA----------------ATTTTTGTTTTTATACCTAAAGATATTTAACCATTCCACA------------------------------CTGGGCGAAA-------TA-----------A----------ACCATATTATC-TTCATACASizeHit CountTotal NormTotal
No Reads
droRho1
TC-------TTCTAGCTTTTATAGTTTCCGAGATCTCAGCGTTCATACGGACGG------------AC--------TGA----CGGACATGGCTATATCGACTCGGCTAGTGACCCTGATCAAGAATAT--ATATACTTTATAGGGTCGGAAACGCTTCCTTCTA-CCTGTTACATACTT-------TTGCACGAATACAATATA-CCCTT--T-------------TACTC--T----ACGAGTAACGGGTATAATCATAAATTTCATTTCTTTTTTC-T-------GAATTGTGGA---TCT--------------AG-----TGACGACTGATAGTTCGA---CTG---------------------------------------------------TACAT---T--------------------------------A-AATAATAAA----AAATCSizeHit CountTotal NormTotal
No Reads
droFic1
TT---------TTAACTCTTAAAGTTCCCGAAAACTCGACGTTCATATGGATGG------------AC--------AGA----TAGACAGGCATA--------------AAGATATGGATCGAACATATTCATATACTTTATGAAATCGCAAGTGGTTCCTTCGA-CTTGTTACATTAAA-------TACATTATATACAATATA-CAATAATGTATACAATACAACTACTC--T----ATAAGTAACGGGTATAAATATTG-------------TTAT-T-------AGATATTTC-------------------------------------------------TTA---------------------------------------------------CTAGTAAATA-------TAAGTC-----AGT----------CCCTTTCCATT-CATGCAAASizeHit CountTotal NormTotal
No Reads
droKik1
TA-------TAA--------------------------------------------------------------------------------------------------------------------------------------------ATATATTTTTTTA-GATATTACA------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------CAA---------------------------------------------------CAAATGAATG-------AATATA-----AAT----------ACCATTATTT--TTTACCAGSizeHit CountTotal NormTotal
No Reads
droAna3
CT-------CAATAGCTTTAAAACTGAGAGACAAGTTTTCGTAGAAACAGACAG------------AC--------AGA----CGGACATGCTCTTATCGACTCTGG------AGGTGATCAAGAATAT--ATATACTTTATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................CGGACATGCTCTTATCGACTC.....................................................................................................................................................................................................................................................................................................................................................................2180.131100000
..............................................................................A----CGGACATGCTCTTATCGACT......................................................................................................................................................................................................................................................................................................................................................................2180.131100000
........................................GTAGAAACAGACAG------------AC--------AGA----CG........................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droBip1
GT-------CTTTATCTCTTATAGTCTGTGAGATCCACGCGTTCATACATACTC------------AC--------AGA----CGAACATGGCTATATCGACTCGGCTGTTGATGCTGATCAAGAATGT--ATATACTTTATGGGGTCGGAGTT------------------ACA-------------------TCTACAACATA-CCTTT--G-------------TACTC--T----ACTAATACCGAGTATAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TG-------CTCTAGCTCTTATAGTCCTTGAGCACTAGGCGCTAATAGGGACTGACAGA----CGGACGGACGGACAGA----CAGACAGGGCTCAATTGACTCGGATATTGATGCTGATCAAGAATAT--ATATACTTTATGGGGTCGGAAACGATTCCTTCTG-GACGTTACACACATCCACTTTTACCACAAATCTAATATA-TGTAT--GT----AG------CACTCATT----TTGAGTATCGGGTATAAAAACCTAC---T-----------------------------------------------------ATTCAACCCTTTTA---------------------------------CACACATTTTGCAT------------------GGATTATATG-------AACATT-----TTT----------ACAGTCAT------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................TCGGAAACGATTCCTTCTG-GA.....................................................................................................................................................................................................................................................................................................21203.557107100000000
.................................................................................................................TGCTGATCAAGAATAT--ATATACTT..................................................................................................................................................................................................................................................................................................................................24202.354700000047000
.................................................................................................................TGCTGATCAAGAATAT--ATATACTTT.................................................................................................................................................................................................................................................................................................................................25201.252500000025000
...............................................................................................................................................................................................................................................TTGAGTATCGGGTATAAAAACCT.......................................................................................................................................................................................................2361.0060510000000
..........................................TAATAGGGACTGACAGA----CGGACGG.......................................................................................................................................................................................................................................................................................................................................................................................................2421.0020000000020
.............................................TAGGGACTGACAGA----CGGACGGACG....................................................................................................................................................................................................................................................................................................................................................................................................2421.0020000000020
..........................................TAATAGGGACTGACAGA----CGG...........................................................................................................................................................................................................................................................................................................................................................................................................2031.0030000000030
.............................................TAGGGACTGACAGA----CGGACGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................2321.0020000000110
............................................................................................................................................................TTCCTTCTG-GACGTTACACA............................................................................................................................................................................................................................................................................................20200.901801800000000
.............................................................................................................................................................TCCTTCTG-GACGTTACACAC...........................................................................................................................................................................................................................................................................................20200.701401300001000
......................................................ACAGA----CGGACGGACGGACAG...............................................................................................................................................................................................................................................................................................................................................................................................20200.651300000000130
.................................................................GACGGACGGACAGA----CAGAC.....................................................................................................................................................................................................................................................................................................................................................................................19200.651300000000130
..................TTATAGTCCTTGAGCACTAGGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2480.6350300000200
..........................................................................................................................................................GATTCCTTCTG-GACGTTACACAC...........................................................................................................................................................................................................................................................................................23200.601201200000000
.....................................................GACAGA----CGGACGGACGGACA................................................................................................................................................................................................................................................................................................................................................................................................20200.551101100000000
............................................ATAGGGACTGACAGA----CGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000010
.............................................TAGGGACTGACAGA----CGGACGGA......................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000010
.....................................................................................................................GATCAAGAATAT--ATATACTTTA................................................................................................................................................................................................................................................................................................................................22200.501000000001000
..............................................AGGGACTGACAGA----CGGACGGACGG...................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000010
..............................................AGGGACTGACAGA----CGGACGGACGGAC.................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000010
.....................................................................GACGGACAGA----CAGACAGGGCTCAAT...........................................................................................................................................................................................................................................................................................................................................................................25200.4590000000090
.....................................................................GACGGACAGA----CAGACAGGGCTC..............................................................................................................................................................................................................................................................................................................................................................................22200.4080000000080
............................................................................................................................................................................ACACACATCCACTTTTACCAC............................................................................................................................................................................................................................................................................21200.4080800000000
................................................................................................................ATGCTGATCAAGAATAT--ATATACT...................................................................................................................................................................................................................................................................................................................................24200.4080000000800
........................................................AGA----CGGACGGACGGACAGA----C.........................................................................................................................................................................................................................................................................................................................................................................................20200.4080700001000
......................................................................................................................................................................................................................................TCATT----TTGAGTATCGGGTATAAAAAC.........................................................................................................................................................................................................26200.3570420000010
...................................................................................................................................................CGGAAACGATTCCTTCTG-GACG...................................................................................................................................................................................................................................................................................................22200.3570000000070
.....................................................................GACGGACAGA----CAGACAGGGC................................................................................................................................................................................................................................................................................................................................................................................20200.3570700000000
..........................................TAATAGGGACTGACAGA----CGGA..........................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000010
....................................................................................................................................................GGAAACGATTCCTTCTG-GAC....................................................................................................................................................................................................................................................................................................20200.3060600000000
.........................................................................................................................................TTTATGGGGTCGGAAACGA.................................................................................................................................................................................................................................................................................................................19200.3060600000000
..........................................................................................................................................TTATGGGGTCGGAAACGATTCC.............................................................................................................................................................................................................................................................................................................22200.2550500000000
.........................................................GA----CGGACGGACGGACAGA----CAGACAG...................................................................................................................................................................................................................................................................................................................................................................................25200.2550000000500
................................................................................................................................T--ATATACTTTATGGGGTCGGA......................................................................................................................................................................................................................................................................................................................21200.2550000000500
...................................................................CGGACGGACAGA----CAGACAGGGCT...............................................................................................................................................................................................................................................................................................................................................................................23200.2550000000500
.......................................................................................................................................................................................................................................CATT----TTGAGTATCGGGTATAAA............................................................................................................................................................................................................22200.2040000000400
...................................................................................................................................................CGGAAACGATTCCTTCTG-GACGT..................................................................................................................................................................................................................................................................................................23200.2040000000400
...............................................................................................................................................................................................................................................TTGAGTATCGGGTATAAAAACC........................................................................................................................................................................................................22200.2040030001000
..........................................................A----CGGACGGACGGACAGA----CAGACAGGG.................................................................................................................................................................................................................................................................................................................................................................................26200.1530000000030
...........................................................................................................................................................................TACACACATCCACTTTTACCACAAATC.......................................................................................................................................................................................................................................................................27200.1530000000300
....................................................................................................................TGATCAAGAATAT--ATATACTT..................................................................................................................................................................................................................................................................................................................................21200.1530300000000
...............................................................................................................................................GGGTCGGAAACGATTCCTTCTG-GAC....................................................................................................................................................................................................................................................................................................25200.1530300000000
.......................................................................CGGACAGA----CAGACAGGGCT...............................................................................................................................................................................................................................................................................................................................................................................19200.1530000000030
........................................................................GGACAGA----CAGACAGGGCTC..............................................................................................................................................................................................................................................................................................................................................................................19200.1530000003000
.................................................................GACGGACGGACAGA----CAGACAGGGCTC..............................................................................................................................................................................................................................................................................................................................................................................26200.1530000000030
..................................................................................................................................................TCGGAAACGATTCCTTCTG-GAC....................................................................................................................................................................................................................................................................................................22200.1530001000200
.......................GTCCTTGAGCACTAGGCGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1310100000000
...................................................................................................GACTCGGATATTGATGCTGATCAAGA................................................................................................................................................................................................................................................................................................................................................2690.1110100000000
........................................................................................................................................................ACGATTCCTTCTG-GACGTTACACAC...........................................................................................................................................................................................................................................................................................25200.1020200000000
................................................................................................................................T--ATATACTTTATGGGGTCGGAAAC...................................................................................................................................................................................................................................................................................................................24200.1020200000000
..................TTATAGTCCTTGAGCACTAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................22100.1010100000000
.....................................................GACAGA----CGGACGGACGGACAGA----CA........................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000002
...............................................................CGGACGGACGGACAGA----CAGACAGGG.................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000020
......................................................................................................................................................................................................................................TCATT----TTGAGTATCGGGTATAAAAACC........................................................................................................................................................................................................27200.1020200000000
......................................................................ACGGACAGA----CAGACAGGGCTC..............................................................................................................................................................................................................................................................................................................................................................................21200.1020000000002
.......................................................CAGA----CGGACGGACGGACAGA----CAGAC.....................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000200
................TCTTATAGTCCTTGAGCACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................20120.0810000001000
...........................................................................CAGA----CAGACAGGGCTCAATTGACT......................................................................................................................................................................................................................................................................................................................................................................24130.0810000000010
............................................................................AGA----CAGACAGGGCTCAATT..........................................................................................................................................................................................................................................................................................................................................................................19140.0710000001000
...................................................................CGGACGGACAGA----CAGACAGGGCC...............................................................................................................................................................................................................................................................................................................................................................................23200.0510000000010
.......................................................................................................................TCAAGAATAT--ATATACTTTATGGG............................................................................................................................................................................................................................................................................................................................24200.0510000100000
................................................................GGACGGACGGACAGA----CAGAC.....................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000000
...............................GCACTAGGCGCTAATAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000001000
.............................................................................................................................ATAT--ATATACTTTATGGGGTC.........................................................................................................................................................................................................................................................................................................................21200.0510001000000
......................................................................................................................................................................GACGTTACACACATCCACTT...................................................................................................................................................................................................................................................................................20200.0510100000000
.............................GAGCACTAGGCGCTAATAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
....................................................................GGACGGACAGA----CAGACAGGGCTCAAT...........................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
..............................AGCACTAGGCGCTAATAGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000001000
..................................................................ACGGACGGACAGA----CAGACAGGGCTCAAA...........................................................................................................................................................................................................................................................................................................................................................................28200.0510000000010
.........................................................................................................................................................................................................................................TT----TTGAGTATCGGGTATAAAAACC........................................................................................................................................................................................................24200.0510100000000
.......................................................................CGGACAGA----CAGACAGGGCTCA.............................................................................................................................................................................................................................................................................................................................................................................21200.0510000000100
...............................................................CGGACGGACGGACAGA----CAGACAGG..................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000010
.................................................................GACGGACGGACAGA----CAGACAGG..................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.........................................................GA----CGGACGGACGGACAGA----CAGACAGG..................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
...................................................................................................................................ATATACTTTATGGGGTCGGA......................................................................................................................................................................................................................................................................................................................20200.0510000000010
.................................................................GACGGACGGACAGA----CAGACAGGG.................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
....................................................................................................................................TATACTTTATGGGGTCGGAA.....................................................................................................................................................................................................................................................................................................................20200.0510000000010
..........................................................................................................................................................................................................................................T----TTGAGTATCGGGTATAAAAACC........................................................................................................................................................................................................23200.0510100000000
........................................................AGA----CGGACGGACGGACAG...............................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
............................TGAGCACTAGGCGCTAATAGGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
.......................................................CAGA----CGGACGGACGGACAGA----CAGACA....................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000100
.................................................................................................................................................................TCTG-GACGTTACACACATCC.......................................................................................................................................................................................................................................................................................20200.0510001000000
..................................................................ACGGACGGACAGA----CAGAC.....................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000001
droPer2
TG-------CTCTAGCTTGTATAGTCTTTGAGCACTAGGCGCTGATAGGGACGG------------ACAGACGGACAGA----CAGACAGGGCTCAATCGACTCGGCTGTTGATGCTGATCAAGAATAT--ATATACTTTATGGGGTCGGAAACGATTCCTTCTG-GACGTTACACACATCCATTTTCACCACAAATCTAATATA-CCCCA--A-------------TACTCATT----TTGAGTATCGGGTATAAAAACAC---------CCAATTTG-T-----------------CAA---AT-------------------------TTTC-GCAA------CC----------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................CGTTACACACATCCATTTTCACCACA...........................................................................................................................................................................................................................................................................26200.459090000
...................TATAGTCTTTGAGCACTAGGCGCTGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................28200.204040000
..................GTATAGTCTTTGAGCACTAGGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................24160.132020000
..................................CTAGGCGCTGATAGGGACGG------------A..........................................................................................................................................................................................................................................................................................................................................................................................................21200.102000002
...............................GCACTAGGCGCTGATAGGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000002
..................GTATAGTCTTTGAGCACTAGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................23160.061010000
.............................................................................................TCAATCGACTCGGCTGTTG.............................................................................................................................................................................................................................................................................................................................................................19200.051000001
droWil2
ATTTGTTGGCTCTAGCTTTTACAGTCTCCGCGATCTAGGTGTTCATACGGACGG------------AC--------AGA----CGGACATGGCTAGATCGACTCAACTGTTGTTCCTGATCAAGAATAT--ATAAACTTTATGGGGTCGGAGAAGCTTCCTTCTG-CCTGTTACATACAT-------TTTGGCCACTTTAATATA-CCATT--T-------------CACCC--T----ATGGGTGTATGGTATAAAAATAT--------------TTG-A-----------------AAA---ATATCAAAGAAGCTA---------CCTTATTTAATTTAATACCT---------------------------------------------------------------------------------TTGCAGTCCTTGGCCATTATATG-TTTACA--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................TCATACGGACGG------------AC--------AGA----CGG.......................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
...................................TAGGTGTTCATACGGACGG------------AC--------AGA----CG........................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
...............................GATCTAGGTGTTCATACGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
droVir3
GT-------CTCTAGCTCTTATAGATTCTGAGATCCTTGCGTTCATACATACGGACAGA----CGGACAGACAGACAGA----CGGACATGGCTAGATCGTGCTGA---TTGGTGCTGATCAAGAATAT--ATATACTTTATGGGGTTTGAGATGCTTCCTTATG-TCTGTTACAAACATTTGGTTTTTGCACAAATACAATATA-CCCTT--A-------------TACCCATTTTTAATGGGTTCAAGGTATAAAGGTATAA---AAA-G--GTATCT--------------------------------------AGTATATAATACTTATATAATATAATAT---------------------------------------------------------ATC-ATG-------ATATAC-----ATT----------ATTA-TATATG-TATATAATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................TTCATACATACGGACAGA----CGGACAGA......................................................................................................................................................................................................................................................................................................................................................................................................26201.1523000000000000000000000000099500000000000000000000000000000000000
..........................................................................................................................AGAATAT--ATATACTTTATGGGGTTT........................................................................................................................................................................................................................................................................................................................2530.672000000000000000000000000000010100000000000000000000000000000000
.........................................TTCATACATACGGACAGA----CGGA..........................................................................................................................................................................................................................................................................................................................................................................................................22200.5511000000000000000000000000900000002000000000000000000000000000000
.........................................TTCATACATACGGACAGA----CGGACAGAC.....................................................................................................................................................................................................................................................................................................................................................................................................27200.5010000000000000000000000000060220000000000000000000000000000000000
.........................................TTCATACATACGGACAGA----CGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................23200.357000000000000000000000000000052000000000000000000000000000000000
........................................................................................................................CAAGAATAT--ATATACTTTATGGGGTTT........................................................................................................................................................................................................................................................................................................................2730.331000000000000000000000000000010000000000000000000000000000000000
............................TGAGATCCTTGCGTTCATACATACGGA......................................................................................................................................................................................................................................................................................................................................................................................................................27200.306000000000000000000000000000006000000000000000000000000000000000
.....................................TGCGTTCATACATACGGACAGA----CGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................27200.255000000000000000000000000000004000000000100000000000000000000000
.........................................TTCATACATACGGACAGA----CGGACAG.......................................................................................................................................................................................................................................................................................................................................................................................................25200.255000000000000000000000003000000000000020000000000000000000000000
.......................................................................................................................TCAAGAATAT--ATATACTTTATGGGGTT.........................................................................................................................................................................................................................................................................................................................27200.204000000000000000000000000000200010000100000000000000000000000000
.................................TCCTTGCGTTCATACATACGGACA....................................................................................................................................................................................................................................................................................................................................................................................................................24200.153001000000000000000002000000000000000000000000000000000000000000
.........................................TTCATACATACGGACAGA----CGGACAGACA....................................................................................................................................................................................................................................................................................................................................................................................................28200.153000000000000000000000000120000000000000000000000000000000000000
.......................................................................................................................TCAAGAATAT--ATATACTTTATGG.............................................................................................................................................................................................................................................................................................................................23200.102000000000000000000000000000000200000000000000000000000000000000
.........................................TTCATACATACGGACAGA----CG............................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000020000000000000000000000000000000000
.................................TCCTTGCGTTCATACATACGGACAGA----..............................................................................................................................................................................................................................................................................................................................................................................................................26200.102000001000000000000000000100000000000000000000000000000000000000
........................................................................................................................CAAGAATAT--ATATACTTTATGGGGTT.........................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000000000001100000000000000000000000000
...........CTAGCTCTTATAGATTCTGAGATCCTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................28180.061000000000000000000000000010000000000000000000000000000000000000
.................................TCCTTGCGTTCATACATACGGACAG...................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000010000000000000000000000000
..........................................TCATACATACGGACAGA----CGGACAGAC.....................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000001000000000000000000000000000000000000000000
.................................................TACGGACAGA----CGGACAGACAGA..................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
.................................TCCTTGCGTTCATACATACGGA......................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
.................................................TACGGACAGA----CGGACAGACAGACAGA----C.........................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000100000000000000000000000000000000000
.....................................TGCGTTCATACATACGGACAGA----CGGA..........................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
........................................GTTCATACATACGGACAGA----CGGA..........................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000001000000000000000000000000000000000
...........................................CATACATACGGACAGA----CGGACAGACA....................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000010000000000000000000000000000000
.....................TAGATTCTGAGATCCTTGCGTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000100000000000000000000000000000000000000000000
....................ATAGATTCTGAGATCCTTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
........................ATTCTGAGATCCTTGCGTTCA................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
..........................................................A----CGGACAGACAGACAGA----CGGACATGG.................................................................................................................................................................................................................................................................................................................................................................................26200.051100000000000000000000000000000000000000000000000000000000000000
......................................................................ACAGACAGA----CGGACATGGCTA..............................................................................................................................................................................................................................................................................................................................................................................21200.051000000000001000000000000000000000000000000000000000000000000000
.............................................TACATACGGACAGA----CGGACAG.......................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
.........................................TTCATACATACGGACAGA----C.............................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000010000000000000000000000000
....................................TTGCGTTCATACATACGGACAGA----CG............................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................TTGCACAAATACAATATA-CC.............................................................................................................................................................................................................................................................20200.051000000000000000000000000100000000000000000000000000000000000000
......................................GCGTTCATACATACGGACAGA----CGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000100000000000000000000000000000000000000000000000
..................................CCTTGCGTTCATACATACGGACAG...................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000000100000000000000000000000
....................................TTGCGTTCATACATACGGACA....................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................CATTTTTAATGGGTTCAAGGTAT...............................................................................................................................................................................................................23200.051000000000000000000000000000100000000000000000000000000000000000
....................................................GGACAGA----CGGACAGACAGA..................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000001000000000000000000000000000000000
..........................TCTGAGATCCTTGCGTTCATACATACG........................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000000000000000000000000000010
....................................TTGCGTTCATACATACGGACAGA----C.............................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000000100000000000000000000000
..............................AGATCCTTGCGTTCATACATA..........................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001000000000000000000000000000000000000000000000000000000000
..........................TCTGAGATCCTTGCGTTCATA..............................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
.............................................TACATACGGACAGA----CGGACAGACAGA..................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000001000000000000000000000000000
.........................................TTCATACATACGGACAGA----CGGACA........................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000001000000000000000000000000
droMoj3
GT-------CTCTAGCTCTTATATCTACTGAAATCGACGCGTTCATACATACGG------------AC--------AGA----CGGACAGGGCCAAATCAACTCAGCTCGTCACCCTGATCAAGAATAT--ATATACTTTGTGGGGTCTGCCACGCCTCCTTCTC-CCTGTTACATACAT-------TTCAACAAAACCATTATA-CCCTGATTT--------------CCCATTGAAAATGGGTTCAGGGTATAAAAAAGT--------------TAA-T-------GTTTTTCGCA---A--------------------------------------------ATA---------------------------------------------------AAAAAAAAAT-------ATTATT------------------TTTGTTAAATT-TTTTAAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................TACATACAT-------TTCAACAAAACCATT...................................................................................................................................................................................................................................................................24200.153300000
.......................................................................................................CAGCTCGTCACCCTGATCAAG.................................................................................................................................................................................................................................................................................................................................................21200.102200000
...........................................................................................................TCGTCACCCTGATCAAGAATA.............................................................................................................................................................................................................................................................................................................................................21200.051100000
....................................................GG------------AC--------AGA----CGGACAGGGCCAAATCAACTC.....................................................................................................................................................................................................................................................................................................................................................................28200.051000010
........................................................................................................AGCTCGTCACCCTGATCAAGA................................................................................................................................................................................................................................................................................................................................................21200.051100000
...................................GACGCGTTCATACATACGG------------AC--------A................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
droGri2
GT-------CTCTAGCTTTCATAGTCTCTGAGATCTACGTGCTCATACAGACCGATGGATGGTCGGACGCACGGACAGA----CGGACATGGCTATATCGACTCGGCTGTTGACCCTGATCAATAATAT--ATATACTTTATGGGGACGGAGATGCTTCTTTCTG-CCTGTTACATACAT-------TTGCATAAAACCATTATA-CCCTTTAA-------------TGATCAA-----CTGTGTATTGGAAGTAATTAGA--------GTCAAATCTA-------------------ACA---A-------------------------TTTTTTAA--------TAT---------------------------------------------------TATACTAATTACTACCGGCTCA----TTTTT----------TGTGCTAATTATTTTATAATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 12:58 PM