ID:

dsi_16849

 Coordinate:

x:20396720-20396869 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [x_20395995_20396719_-]; exon [x_20395138_20396719_-]; intron [x_20396720_20397438_-]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
Hoyak2DNAhAT-Ac-

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACTCGACTATAGCATTCTCTCTTGTTATATTTGTTATTTGTTTTATTAAATTAAAAATCAATCTATTAGTACTCACTTAAACCAAACAAAAACGGCAAACTTATTGCGGCATGTTTACAAATATAAACAAATTAAAGAAAAGTAATATTATTTTGTATTGTTATAATAGTTTAAAATTAAATATTTTTTTGTTTCTCCAGACTTTCAGTGGTCGGAGAAGCTGAACTACAACAACTTGGAAGCCGAGGCA
**************************************************.................................(((((((((..((((.....))))....((((((......))))))..............((((((((((((.(((((....))))).))))))..)))))))))))))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 M023
head
 M053
female body
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
...........................................................................................................................................................................................................TTCAGTGGTCGGAGAAGCTGAACTAC..................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TTCAGTGGTCGGAGAAGCT............................ 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TTCAGTGGTCGGAGAAGC............................. 18 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TTTCAGTGGTCGGAGAAGCTG........................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................TAATATTATTTTGTAAAGTTAT...................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................CGGAGAAGCTGAACTACA.................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GACTTTCAGTGGTCGGAGAAGCTGAAC........................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................GTCGGAGAAGCTGAACTACAG................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGGAGAAGCTGAACTACAACAACTTG............ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AGCTGAACTACAACAACTTGGAAGC....... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGAACTACAACAACTTGGAAGCCGAGGCA 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TCAGTGGCCGGAGAAGCTGAACT....................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CTTTCAGTGGTCGGAGAAGCT............................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TCGGAGAAGCTGAACTACAACAACTT............. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................GACTTTCAGTGGTCGGAGAAGCTGAA......................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGGAGAAGCTGAACTACAACA................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..TCGACTATAGCATTCTCTCTTGTTAT.............................................................................................................................................................................................................................. 26 0 6 0.33 2 0 2 0 0 0 0 0 0 0 0
..........................................................................................................................ATAAACAGATTAAAGAAAA............................................................................................................. 19 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0
ACTCGACTATAGCATTCTCTCTTGTTA............................................................................................................................................................................................................................... 27 0 8 0.25 2 0 0 0 0 0 0 0 2 0 0
..TCGACTATAGCATTCTCTCTTGTTA............................................................................................................................................................................................................................... 25 0 12 0.17 2 0 0 0 0 0 0 0 0 1 1
..........................................TTATTAGATAAAAAATCAAT............................................................................................................................................................................................ 20 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
..........................................TTATTAGATAAAAAATCAATGT.......................................................................................................................................................................................... 22 3 9 0.11 1 0 0 0 1 0 0 0 0 0 0
ACTCGACTATAGCATTCTCTCTTGT................................................................................................................................................................................................................................. 25 0 20 0.10 2 0 0 0 0 0 0 0 0 2 0
....GACTATAGCATTCTCTC..................................................................................................................................................................................................................................... 17 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0
.....................................................................................................................................................................................................................................AACAACTTGGAGGCC...... 15 1 11 0.09 1 0 0 0 0 0 1 0 0 0 0
...CGACTATAGCATTCTCTCTTGTTA............................................................................................................................................................................................................................... 24 0 13 0.08 1 0 0 0 0 0 0 1 0 0 0
.........................................TTTATTAGATAAAAAATCAATG........................................................................................................................................................................................... 22 3 14 0.07 1 0 0 0 1 0 0 0 0 0 0
...........................................TATTAGATAAAAAATCAAT............................................................................................................................................................................................ 19 2 18 0.06 1 0 0 0 1 0 0 0 0 0 0
............................................ATTAGATAAAAAATCAAT............................................................................................................................................................................................ 18 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0
ACTCGACTATAGCATTCTCTCTTG.................................................................................................................................................................................................................................. 24 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0
.....................................................AAAATCAATGTCTTCGTACT................................................................................................................................................................................. 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.CTCGACTATAGCATTCTCTCTTGTT................................................................................................................................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
..TCGACTATAGCATTCTCTCTTGT................................................................................................................................................................................................................................. 23 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0
........................................ATTTATTAGATAAAAAATCAAT............................................................................................................................................................................................ 22 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0
...CGACTATAGCATTCTCTCTTGTT................................................................................................................................................................................................................................ 23 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................TGTTGTAGTAGTTTAAAA.......................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

TGAGCTGATATCGTAAGAGAGAACAATATAAACAATAAACAAAATAATTTAATTTTTAGTTAGATAATCATGAGTGAATTTGGTTTGTTTTTGCCGTTTGAATAACGCCGTACAAATGTTTATATTTGTTTAATTTCTTTTCATTATAATAAAACATAACAATATTATCAAATTTTAATTTATAAAAAAACAAAGAGGTCTGAAAGTCACCAGCCTCTTCGACTTGATGTTGTTGAACCTTCGGCTCCGT
**************************************************.................................(((((((((..((((.....))))....((((((......))))))..............((((((((((((.(((((....))))).))))))..)))))))))))))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 M023
head
.GAGCTGATATCGTAAGAGTGAACAATAT............................................................................................................................................................................................................................. 28 1 5 1.60 8 7 0 1 0 0 0 0
..............................................................................................CGTTTGAATAACGCCGTACAAATGT................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................................................................................................................TCTGAAAGTCTCCAGACGCTT............................... 21 3 2 1.00 2 0 0 0 2 0 0 0
TGAGCTGATATCGTAAGAGAGAACAAT............................................................................................................................................................................................................................... 27 0 8 0.75 6 5 0 1 0 0 0 0
................................................................................TGGTTTGTTTTTGCCG.......................................................................................................................................................... 16 0 12 0.75 9 0 0 0 0 9 0 0
TGAGCTGATATCGTAAGAGTGAACAATAT............................................................................................................................................................................................................................. 29 1 5 0.60 3 1 0 2 0 0 0 0
.........................................................................................................................................................................................AAAAAAAAAGAGGTCAGAAAGT........................................... 22 2 2 0.50 1 0 0 0 0 0 1 0
.GAGCTGATATCGTAAGAGAGAACAAT............................................................................................................................................................................................................................... 26 0 8 0.38 3 3 0 0 0 0 0 0
........................................................................................TTTTGCCGGCTGAATAACGC.............................................................................................................................................. 20 2 3 0.33 1 0 0 0 0 0 1 0
...............................................................................TTGGTTTGTTTTTGC............................................................................................................................................................ 15 0 20 0.30 6 0 2 3 0 1 0 0
..........TCGTAAGAGTGAACAATAT............................................................................................................................................................................................................................. 19 1 8 0.13 1 0 0 1 0 0 0 0
..............................................................................TTTGGTTTGTTTTTGC............................................................................................................................................................ 16 0 8 0.13 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................ACATCATGTTGTTGAATCTT......... 20 3 10 0.10 1 0 0 0 0 0 0 1
..................................................................................................................................................................................................................................ATGTTGTAGAACCTT......... 15 1 12 0.08 1 0 0 0 0 1 0 0
...............................................................................TTGGTTTGTTTTTGCC........................................................................................................................................................... 16 0 13 0.08 1 0 0 0 0 1 0 0
............................................................................................................................................................................................................................GACTTGATGTTGATG............... 15 1 20 0.05 1 0 0 0 1 0 0 0
TGAGCTGATATCGTAAGAGAGAACA................................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0
TGAGCTGATATCGTAAG......................................................................................................................................................................................................................................... 17 0 20 0.05 1 0 1 0 0 0 0 0
.GAGCTGATATCGTAAGAGAGA.................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0 0
.GAGCTGATATCGTAAGAGAGAACAA................................................................................................................................................................................................................................ 25 0 20 0.05 1 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:20396670-20396919 - dsi_16849 ACTCG-ACTATAGC-ATTCTCTCTTGTTATATTTGTTATT--------------------------TGT-----------TTTATTAA-----------------------------------ATTAAAAATCA------------------------------------------------------------ATCT---------------------------------ATTAGTAC-TCACTTAAACCAAA--C-----------------AA------A-AACGGCAAACTTATTGCGGCATGTTTACAA-------------ATATAAACAAATTA--AAG--A---------------------------------------------------------------------------A-----------------------AAGTAATATTATTTTGTATTGTTATA------------ATAGT---TTA-AAATTAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTTTGTTTCTCCAGACTTTCAGTGG-----------TCGGAGAAGCTGAACTACAACAACTTGGAAGCCGAGGCA
droSec2 scaffold_55:32159-32408 - ACTCG-ACTATAGC-ATTCTCTCTTGTTATATTTGTTATT--------------------------TGT-----------TTTATTAA-----------------------------------ATTAAAAATCA------------------------------------------------------------ATCT---------------------------------ATTAGTAC-TCACTTAAACCAAA--C-----------------AA------A-AACGGCAAACTTATTGCGGCATGTTTACAA-------------ATATAAACAAATTA--AAG--A---------------------------------------------------------------------------A-----------------------AAGTAATATTATTTTGTATTGTTATA------------ATAGC---TTA-AAATTAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTTTGTTTCTCCAGACTTTCAGTGG-----------TCGGAGAAGCTGAACTACAACAACTTGGAAGCCGAGGCA
dm3 chrX:21878239-21878500 - ATTTC-GCGTTCGC-ATTCTCTTTA----TATTTTTTAT---------------------------------------------TTGA-----------------------------------ATTAAAAATCT------------------------------------------------------------ATCT---------------------------------ATTAGTAC-TTACTAAAACCAAA--C-----------------AA------A-AACGACAACCTTATTGCGGCATGTTTACAA-------------ATATAAACAAATGG--AAC--AAAAGT----------------------------------------------------------------TATTATTATT--TTTAGAGTT------------TTTTATTATTTTTTACTGTTATA------------ATAGT---TTA-AAATCAAATGTTT------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTGTTTCTCCAGACTTTCAGTGG-----------TCGGAGAAGCTGAACTACAACAACTTGGAAGCCGAGGCA
droEre2 scaffold_4690:18254506-18254748 - TTTTT-GTATTGCC-AATTTGTTT--------------------------------------------T-----------TTTTTTCA-----------------------------------ATTCAAA-T-A------------------------------------------------------------ATCT---------------------------------AC---TTC-TCACTTCAACCGAA--------------------TTGCACAAGTAACAGCAACCTTAATACGGCATGATTACAATATATATTATTATGTAGACACGAAAAG--AAG--T---------------------------------------------------------------------------A-----------------------AAATAATATTACCGAGTA---ATATG------------GGAGT---GCG-TAATTTAAA----------------------------------------------------------------------------------------------------------------------------------------------------------AATGTGTTGTTTCTTCAGACTTCCAGTGG-----------TCGGAGAAGCTGAACTACAACAATTTGGAAGCCGAGGGG
droYak3 X:21321540-21321736 - TTCGT---------------------------------------------------------------------------TTTATTGA-----------------------------------ATTCAAAGT-A------------------------------------------------------------ATCT---------------------------------CC---TTC-TCACTTCAACCAAA--------------------AT------C-CACTTCAACCA-AATGCGGCATGATTTCAA-------------ATATAA---------------C---------------------------------------------------------------------------A-----------------------AAATAATATTATTTTTGTGTATCACA------------ATAGT---TTGTAAATTAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTTTGT-TCCGCAGACTTCCAGTGG-----------TCGGAGAAGCTGAACTACAACAACATGGAAGCCGAGGCA
droEug1 scf7180000405174:115286-115482 + ACTCG-ACTATAGC-GTTTCCTCTTGT--------------------------TTTT-GATT----TAG-----------TTTTGTGA-----------------------------------ATCATTTGTTG------------------------------------------------------------CTTT---------------------------------GTTATTA---TACTTAAACCAAG--A-----------------AA------T-ACTCATAGATAAGCTTTAATCTTTTTAACA-------------ATTGAAATGAATTG--AA------------------------AAAA---------------------------------------------------T-----------------------AATCAT--TTCTGTTGTTCGCTTTTA------------ATTAT---CTG-GAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCGTTTCCTTATCTAGCCTTTAAA----------------------------------------------------T
droBia1 scf7180000299815:7844-8027 - TCTCG-ACTTTAGC-GTTCTCTCTTGA--------------------------TTTCTCATATTATTTT-----------ACCATCAA-----------------------------------TTTTAAGATCGATCCTATGGTAGCTATATGATTATAATAATA-------------------------------------------ATCGAC-------------------C-GATT-TTGATAAAATTAAATTTAAAATTCTGAAATA-----------------------------------------------------------------ATT----------------------------------------------------------------------------------------------------------------AAAAAATTTTATTTTCAGTTGTA------------GGAGG---TAA-ATTTT-------------------------------------------------------------------------------------------------------------------------------------------TAAAC--------------ATTTT------------------------------------------------------------------------TT
droTak1 scf7180000414776:7095-7333 + ACCCG-ACTATAGC-GTTATCTCTTCT--------------------------TTTT-ATTT----TTT-----------AACAGTTA-----------------------------------AATTACTAATG------------------------------------------------------------CTCT---------------------------------ATATCTA---TATCTA-----------TATCTC-------------------------TAATTTAATTTAAACACTTTTTTTT-------------ATTAAATTAAAATA--A----T--------------------AAAATAATATTGCAACTGTTGTAAATCATTTTTATATGAA-------------------------------------------------------------------------------------TAA-ATAA--AAT------------------------------------------------------------------------------AGTTTTGAGATTTTATTAACAAGGAGACGAGAAGTTTT-------------------TGGAC------------------------------------------------------------------TAAAGAGTCGACTGAGGAGCCCAAGAA
droEle1 scf7180000490765:86132-86408 - ACTTC-ACTATAGT-TTTCTTTCTTGA--------------------------TTTA---------TATTTAATTGTTCGATTATTCC-----------------------------------AATGAGAGCTA---------------ATTGATAAA--------------------------------------------------GTCGAT-------------------C-GAGC-TTATCGAAGTTAAAACCATGATTCTGAAATATTAAA------C-CATTACTACAG-AATTAAAAAAAAAT------------------------TAAGATA--CAA--C---------------------------------------------------------------------------C-----------------------AAGTACTAATATTTT----TATTACAATTGCTCCTATGGGAGC---TAA-ATAA--TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTCCGTCCGTCCGACAATGGACAGACCACTTTTGGAAAAGTTTCATTCAAATAGTTTTAAAAGTGAGG--
droRho1 scf7180000767254:6227-6460 + ACTCG-ACTATATC-GTTCTCTGTTGT--------------------------TTTT-TTTT----T----------------GTTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCACA------------ATAGGGTATTGTAAATTAACA----ATTCTCATTATTCAACACAGACTTAACCACAAAGTTTATGTACATGTTAAGGACACTACAACTTTTTTACAACT--------------------------------------AACGTAGTTTTATTTCGTTTTAATGCCTTAGAAAAAATATTTTTTT---TCA-----------CCAC-----------CATGGGAAAGTTTACTTAAAAAAACTAAAAGAAGAGGGG
droFic1 scf7180000454116:134936-134998 - TTCCTTATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGACTTTCAGTGG-----------TCGGAGAAGCTCAACTACAACAATTTGGAGGCCGAGGCG
droKik1 scf7180000300600:957-1127 + ATTTT-TTGTTGTT-TTTTTTTTTG----------G-----------------TTTT---------TAT-----------TTTTTTAA-----------------------------------ATTAAAAATTA---------------TAAATTAAAAAAGGTA-------------------------------------------------------------------------------------------------------------------------------TAA-AAGAGAA-----------------------------AAAAAATTG--A-----------------------------------------------------------------AAAATAAAAGAATAACATA------------------------------------------------------------------------------------------------------TAT*AAACTCCAAACTTTAATT-------------------------ATAAAATT--------------------------------------AAAGTA---AAATTTTATTTAAAT--------------ATATTTTGCTTTCT----------------------------------------------------------------C
droAna3 scaffold_13499:1300571-1300803 - CTTTT-GCTTTT-------TTTTTTGCTTTTATTCG-----------------TTTT---------TAT-----------TTTATTAA-----------------------------------ATTAAAATTAA------------------------------------------------------------ATATAAGTTACACTGTTA-------------------ATTAATACACTGCTAAAATTAAAACTAAAAATTAAAACTA-AAAA------T-TGAAACTACAA-ATTAAAA------------------------CTAA----AAATTAAAAAT--AAAAGTAAACAATATTTAAACATTC---------------------------------------------------T-----------------------GCTTAATTTAAATTGTCAAGTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------GGCGGG---GAAT-------------------------TTTCTTTGTTTTTTTTGGATTT--------------------------------------------------------T
droBip1 scf7180000393849:13388-13545 - ACTCG-ACTATAGCCGTCCTTTCTTGT--------------------------TTAT-TGT--------------------ATATTAT-----------------------------------ATAAAAAATAG------------------------------------------------------------ATCA---------------------------------ATAAATAT-ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTGAT------------TGATATTATCCATATATAATATA------------AAATA---TTT-AAAAAAAATATAT----------------------------------------------------------------------------------------------------------------------------TTTTTTTAAATT--------------ATA----------------------------------------------------TATAGTAGTTTTTAACATTTAACA
dp5 Unknown_group_6:58777-58851 + TATTA-TATTTATT-TA---------------------TT--------------------------T-A-----------TTTATTAA-----------------------------------ATTAACAATTA---------------TCTGCTAATAATGGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATTAC---------AAAAGCAGGAAA
droPer2 scaffold_23:667185-667266 - TTTAT-ATGTATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTTA--TAC--A---------------------------------------------------------------------------T-----------------------ATGTAATATTTGTATATTTTGTTATG-------------------------------GT----------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTATTATTTTTTAAGAGTTTCCAT---------------------------------------------------G
droWil2 scf2_1100000004902:5648051-5648212 - TGATT-TATTTGAA-GA------------------TTATT--------------------------TGT-----------TATCAACA-----------------------------------GTCAAGAATCA------------------------------------------------------------ATCT---------------------------------ATTATTAC-ACCCGTAAG----------------------------------------------------------TGTATAT-------------AT-----------------------------------------------------------------------TTATATAAAAAAGCAGATTATTAACATGTACAGACAATTTTGTCTTAAGAACAAAAATTTGAAATTTCGTTGGA-------------------------------AA----------------------------------------------------------------------------------------------------------------------------------------------------------AGATTATTTT-TCT----------------------------------------------------------------T
droVir3 scaffold_12970:1714315-1714461 - TTTTA-TTTTTT-------------------------ATTTGGATTTATTTAATTTA---------TAT--------------------------------------------------------TTAAAGTTA--------------------------------------------------------------------------------------------------TTTTTAT-T-----------------------------------------------------TAATTTCATTTAGTTTATTT-------------ATTGAA----AAT------GA----------------GCAAATATA---------------------------------------------------T-----------------------GTTTAATTTTATTTTTTACTTTTTTT------------ATAAA---CTT-TATTTTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTTTATT-------------------------------------------------------------------T
droMoj3 scaffold_6500:6007298-6007501 - GTCTCGACTAGAGC-TTTCTTACTTGTTTCAATTTTAATT--------------------------CGA-----------TATGTCAA-----------------------------------A-CAATTGTTG----------------------CCAAGGTCACTTAGGGATCACACAAAGCCTTAAAGCCAGCCT---------------------------------TTTGTTAT-A---------------------------------------------------------TATCGCATATCTTCAC-------------ATA--------TTA--TAT--G---------------------------------------------------------------------------A------------------------AGCCAATTCATTTATTATTATTATT------------ACAAT---TTT-TTTTTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------GCATCTTT-------CTTACTCTCAGCAT-----------T-------------------------------------C
droGri2 scaffold_14822:221158-221396 - GCTCG-ACTACAGT-ACTCTTACTTGT--------------------------TTTATTAG--------------------AAACTGCATAAATTTACTTATTTGTTTAATATTTATTATTTACTATAAAATTAATTTGA-GTTTGCTAC----------------------------------------------------------TTTAATTAACTTATCTATTATCTAATATTTT-TCATCAGAAT--AAATGATAAGTATTAAATAATAA--------------------------------------------------------AC----AAT------AA----------------ATAAATGTA---------------------------------------------------T-----------------------ATAAAAATGTAATATTTATTACAGAA------------ATAAT---ATA-TGTTTATAT----------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTTTGTATT-----------------------------------------------------------------T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACTCG-ACTATAGC-ATTCTCTCTTGTTATATTTGTTATT--------------------------TGT-----------TTTATTAA-----------------------------------ATTAAAAATCA------------------------------------------------------------ATCT---------------------------------ATTAGTAC-TCACTTAAACCAAA--C-----------------AA------A-AACGGCAAACTTATTGCGGCATGTTTACAA-------------ATATAAACAAATTA--AAG--A---------------------------------------------------------------------------A-----------------------AAGTAATATTATTTTGTATTGTTATA------------ATAGT---TTA-AAATTAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTTTGTTTCTCCAGACTTTCAGTGG-----------TCGGAGAAGCTGAACTACAACAACTTGGAAGCCGAGGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGG-----------TCGGAGAAGCTGAACTAC.....................2612.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGG-----------TCGGAGAAGCT............................1912.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGG-----------TCGGAGAAGC.............................1812.00211000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTGG-----------TCGGAGAAGCTG...........................2111.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGAAGCTGAACTACA....................1811.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTCAGTGG-----------TCGGAGAAGCTGAAC........................2711.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------TCGGAGAAGCTGAACTACAG...................2111.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGAAGCTGAACTACAACAACTTG............2611.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAACTACAACAACTTGGAAGC.......2511.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTACAACAACTTGGAAGCCGAGGCA2911.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCAGTGG-----------TCGGAGAAGCT............................2111.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAGAAGCTGAACTACAACAACTT.............2611.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTCAGTGG-----------TCGGAGAAGCTGAA.........................2611.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGAAGCTGAACTACAACA.................2111.00101000000000000000
..TCG-ACTATAGC-ATTCTCTCTTGTTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.33200200000000000000
ACTCG-ACTATAGC-ATTCTCTCTTGTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.25200000020000000000
..TCG-ACTATAGC-ATTCTCTCTTGTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.17200000000110000000
ACTCG-ACTATAGC-ATTCTCTCTTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200000000200000000
....G-ACTATAGC-ATTCTCTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.10200000000002000000
...CG-ACTATAGC-ATTCTCTCTTGTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24130.08100000001000000000
ACTCG-ACTATAGC-ATTCTCTCTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000001000000000
.CTCG-ACTATAGC-ATTCTCTCTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100000000000000
..TCG-ACTATAGC-ATTCTCTCTTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000100000000
...CG-ACTATAGC-ATTCTCTCTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05110000000000000000
droSec2
ACTCG-ACTATAGC-ATTCTCTCTTGTTATATTTGTTATT--------------------------TGT-----------TTTATTAA-----------------------------------ATTAAAAATCA------------------------------------------------------------ATCT---------------------------------ATTAGTAC-TCACTTAAACCAAA--C-----------------AA------A-AACGGCAAACTTATTGCGGCATGTTTACAA-------------ATATAAACAAATTA--AAG--A---------------------------------------------------------------------------A-----------------------AAGTAATATTATTTTGTATTGTTATA------------ATAGC---TTA-AAATTAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTTTGTTTCTCCAGACTTTCAGTGG-----------TCGGAGAAGCTGAACTACAACAACTTGGAAGCCGAGGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTTGGAAGCCGAGGCA2211.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGG-----------TCGGAGAAGCTGAACT.......................2120.5010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------TCGGAGAAGCTGAACTA......................1820.5011000
...................................................................................................................................................................................................................................................................................................................................................TA--AAG--A---------------------------------------------------------------------------A-----------------------AAGTAATATTT.........................................................................................................................................................................................................................................................................................18110.0910010
dm3
ATTTC-GCGTTCGC-ATTCTCTTTA----TATTTTTTAT---------------------------------------------TTGA-----------------------------------ATTAAAAATCT------------------------------------------------------------ATCT---------------------------------ATTAGTAC-TTACTAAAACCAAA--C-----------------AA------A-AACGACAACCTTATTGCGGCATGTTTACAA-------------ATATAAACAAATGG--AAC--AAAAGT----------------------------------------------------------------TATTATTATT--TTTAGAGTT------------TTTTATTATTTTTTACTGTTATA------------ATAGT---TTA-AAATCAAATGTTT------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTGTTTCTCCAGACTTTCAGTGG-----------TCGGAGAAGCTGAACTACAACAACTTGGAAGCCGAGGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGG-----------TCGGAGAAGCTGAACT.......................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTCAGTGG-----------TCGGAGAAGCTGAACT.......................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCAGTGG-----------TCGGAGAAGCTGA..........................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCAGTGG-----------TCGGAGAAGCTG...........................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGAAGCTGAACTACAACAACTTGGA..........2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAGAAGCTGAACTACAA...................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACAACAACTTGGAAGCCGAGGC.2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000002000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGG-----------TCGGAGAAGCTGAACTAC.....................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTACAACAACTTGGAAGC.......2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGG-----------TCGGAGAAGCTGA..........................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCAGTGG-----------TCGGAGAAGCTGAACT.......................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTCAGTGG-----------TCGGAGAAGCTGAA.........................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGG-----------TCGGAGAAGCTGAAC........................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAACTTGGAAGCCGAGG..2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGAAGCTGAACTACA....................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGG-----------TCGGAGAAGCTGAACTACAACA.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAAGCTGAACTACAACAAC...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTACAACAACTTGGAA.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCAGTGG-----------TCGGAGAAGC.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................A------A-AACGACAACCTTATTGCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGAAGCTGAACTACAACAACTTGG...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTGG-----------TCGGAGAAGCTGAACTACA....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCAGTGG-----------TCGGAGAAG..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAACTACAACAACTTGGAAGCC......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGG-----------TCGGAGAAGCTGAACTACA....................2511.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGG-----------TCGGAGAAGCTG...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGG-----------TCGGAGAAGCTGAACTACAACAA................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-----------TCGGAGAAGCTGAACTACA....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAACAACTTGGAAGCCGA....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGG-----------TCGGAGAAGCTGAACTA......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCAGTGG-----------TCGGAGAAGCTGAAC........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGG-----------TCGGAGAAGCTGAACTACAACA.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCAGTGG-----------TCGGAGAAGCT............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACAACAACTTGGAAGCCG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTT------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTGTTTCTCCAG.............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTCAGTGG-----------TCGGAGAAGCTGAAC........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTACAACAACTTGGA..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGG-----------TCGGAGAAGCTGAACTA......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTACAACAACTTGGAAGCCGA....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAACTACAACAACTT.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGG-----------TCGGAGAAGCTGAACTACAA...................2611.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAACTACAACAACTTGGA..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGG-----------TCGGAGAAGCTGAAC........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCAGTGG-----------TCGGAGA................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA------------ATAGT---TTA-AAATCAAATG........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTCAGTGG-----------TCGGAGAAGCTGA..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCTGAACTACAACAACTTGGAAGCCGA....3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCAGTGG-----------TCGGAGAAGCTGAAC........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGACTTTCAGTGG-----------TCGG...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTCAGTGG-----------TCGGAGAAGCT............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACAACAACTTGGAAGCCGAGGCA2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACTTGGAAGCCGAGGC.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGG-----------TCGGAGAAGCTGAACTA......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTCAGTGG-----------TCGGAGAA...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAACTTGGAAGCCGAG...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTACAACAACTTGGAAGCCG.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTTGGAAGCCGAGG..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------TCGGAGAAGCTGAACTACAACAAC...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAACTACAACAACC..............1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTT------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTGTTT...................................................................18140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTTTT-GTATTGCC-AATTTGTTT--------------------------------------------T-----------TTTTTTCA-----------------------------------ATTCAAA-T-A------------------------------------------------------------ATCT---------------------------------AC---TTC-TCACTTCAACCGAA--------------------TTGCACAAGTAACAGCAACCTTAATACGGCATGATTACAATATATATTATTATGTAGACACGAAAAG--AAG--T---------------------------------------------------------------------------A-----------------------AAATAATATTACCGAGTA---ATATG------------GGAGT---GCG-TAATTTAAA----------------------------------------------------------------------------------------------------------------------------------------------------------AATGTGTTGTTTCTTCAGACTTCCAGTGG-----------TCGGAGAAGCTGAACTACAACAATTTGGAAGCCGAGGGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTCCAGTGG-----------TCGGAGAAGC.............................2212.0020100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGGAAGCCGAGGGG1811.0010010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAACTACAACAATTTGGAAGC.......2411.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCTGAACTACAACAATTTGGA..........2411.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTACAACAATTTGGAAG........2211.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTACAACAATTTGGAAGCCGAGG..2711.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTACAACAATTTGGAAG........1911.0010000010
.............................................................................................................................................................................................................................................TC-TCACTTCAACCGAA--------------------TTGCACAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACAACAATTTGGAAGCC......2011.0011000000
droYak3
TTCGT---------------------------------------------------------------------------TTTATTGA-----------------------------------ATTCAAAGT-A------------------------------------------------------------ATCT---------------------------------CC---TTC-TCACTTCAACCAAA--------------------AT------C-CACTTCAACCA-AATGCGGCATGATTTCAA-------------ATATAA---------------C---------------------------------------------------------------------------A-----------------------AAATAATATTATTTTTGTGTATCACA------------ATAGT---TTGTAAATTAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTTTGT-TCCGCAGACTTCCAGTGG-----------TCGGAGAAGCTGAACTACAACAACATGGAAGCCGAGGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGAAGCTGAACTACAACAACATG............2611.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGTGG-----------TCGGAGAAGCTGAAC........................2511.00110000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACATGGAAGCCGAGGCA2111.00100000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTACAACAACATGGAA.........2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACAACAACATGGAAGCCGAGGC.2511.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTGAACTACAACAACATGGAA.........2411.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTACAACAACATGGAAGCC......2411.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTGG-----------TCGGAGAAGCTGAA.........................2111.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTACAACAACATGGAAGCCGAGGCA2811.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTCCAGTGG-----------TCGGAGAAGC.............................2211.00100000010000
droEug1
ACTCG-ACTATAGC-GTTTCCTCTTGT--------------------------TTTT-GATT----TAG-----------TTTTGTGA-----------------------------------ATCATTTGTTG------------------------------------------------------------CTTT---------------------------------GTTATTA---TACTTAAACCAAG--A-----------------AA------T-ACTCATAGATAAGCTTTAATCTTTTTAACA-------------ATTGAAATGAATTG--AA------------------------AAAA---------------------------------------------------T-----------------------AATCAT--TTCTGTTGTTCGCTTTTA------------ATTAT---CTG-GAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCGTTTCCTTATCTAGCCTTTAAA----------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droBia1
TCTCG-ACTTTAGC-GTTCTCTCTTGA--------------------------TTTCTCATATTATTTT-----------ACCATCAA-----------------------------------TTTTAAGATCGATCCTATGGTAGCTATATGATTATAATAATA-------------------------------------------ATCGAC-------------------C-GATT-TTGATAAAATTAAATTTAAAATTCTGAAATA-----------------------------------------------------------------ATT----------------------------------------------------------------------------------------------------------------AAAAAATTTTATTTTCAGTTGTA------------GGAGG---TAA-ATTTT-------------------------------------------------------------------------------------------------------------------------------------------TAAAC--------------ATTTT------------------------------------------------------------------------TTSizeHit CountTotal NormTotal
No Reads
droTak1
ACCCG-ACTATAGC-GTTATCTCTTCT--------------------------TTTT-ATTT----TTT-----------AACAGTTA-----------------------------------AATTACTAATG------------------------------------------------------------CTCT---------------------------------ATATCTA---TATCTA-----------TATCTC-------------------------TAATTTAATTTAAACACTTTTTTTT-------------ATTAAATTAAAATA--A----T--------------------AAAATAATATTGCAACTGTTGTAAATCATTTTTATATGAA-------------------------------------------------------------------------------------TAA-ATAA--AAT------------------------------------------------------------------------------AGTTTTGAGATTTTATTAACAAGGAGACGAGAAGTTTT-------------------TGGAC------------------------------------------------------------------TAAAGAGTCGACTGAGGAGCCCAAGAASizeHit CountTotal NormTotal
No Reads
droEle1
ACTTC-ACTATAGT-TTTCTTTCTTGA--------------------------TTTA---------TATTTAATTGTTCGATTATTCC-----------------------------------AATGAGAGCTA---------------ATTGATAAA--------------------------------------------------GTCGAT-------------------C-GAGC-TTATCGAAGTTAAAACCATGATTCTGAAATATTAAA------C-CATTACTACAG-AATTAAAAAAAAAT------------------------TAAGATA--CAA--C---------------------------------------------------------------------------C-----------------------AAGTACTAATATTTT----TATTACAATTGCTCCTATGGGAGC---TAA-ATAA--TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTCCGTCCGTCCGACAATGGACAGACCACTTTTGGAAAAGTTTCATTCAAATAGTTTTAAAAGTGAGG--SizeHit CountTotal NormTotal
No Reads
droRho1
ACTCG-ACTATATC-GTTCTCTGTTGT--------------------------TTTT-TTTT----T----------------GTTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCACA------------ATAGGGTATTGTAAATTAACA----ATTCTCATTATTCAACACAGACTTAACCACAAAGTTTATGTACATGTTAAGGACACTACAACTTTTTTACAACT--------------------------------------AACGTAGTTTTATTTCGTTTTAATGCCTTAGAAAAAATATTTTTTT---TCA-----------CCAC-----------CATGGGAAAGTTTACTTAAAAAAACTAAAAGAAGAGGGGSizeHit CountTotal NormTotal
No Reads
droFic1
TTCCTTATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGACTTTCAGTGG-----------TCGGAGAAGCTCAACTACAACAATTTGGAGGCCGAGGCGSizeHit CountTotal NormTotal
No Reads
droKik1
ATTTT-TTGTTGTT-TTTTTTTTTG----------G-----------------TTTT---------TAT-----------TTTTTTAA-----------------------------------ATTAAAAATTA---------------TAAATTAAAAAAGGTA-------------------------------------------------------------------------------------------------------------------------------TAA-AAGAGAA-----------------------------AAAAAATTG--A-----------------------------------------------------------------AAAATAAAAGAATAACATA------------------------------------------------------------------------------------------------------TAT*AAACTCCAAACTTTAATT-------------------------ATAAAATT--------------------------------------AAAGTA---AAATTTTATTTAAAT--------------ATATTTTGCTTTCT----------------------------------------------------------------CSizeHit CountTotal NormTotal
No Reads
droAna3
CTTTT-GCTTTT-------TTTTTTGCTTTTATTCG-----------------TTTT---------TAT-----------TTTATTAA-----------------------------------ATTAAAATTAA------------------------------------------------------------ATATAAGTTACACTGTTA-------------------ATTAATACACTGCTAAAATTAAAACTAAAAATTAAAACTA-AAAA------T-TGAAACTACAA-ATTAAAA------------------------CTAA----AAATTAAAAAT--AAAAGTAAACAATATTTAAACATTC---------------------------------------------------T-----------------------GCTTAATTTAAATTGTCAAGTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------GGCGGG---GAAT-------------------------TTTCTTTGTTTTTTTTGGATTT--------------------------------------------------------TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................ATATAAGTTACACTGTTA-------------------ATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.333120000
...................................................................................................................................................................................................................A-------------------ATTAATACACTGCTAAAATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.222020000
.......................................................................................................................................................................................................................................ATTAATACACTGCTAAAATTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.222110000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-------------------------------------------------------------------------------------------------------------------------------------------------------GGCGGG---GAAT-------------------------TTTCTTTG.......................................................................2190.111100000
..............................................................................................................................................................................................................CTGTTA-------------------ATTAATACACTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.111010000
.........TTT-------TTTTTTGCTTTTATTCG-----------------T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111010000
......................................................................................AA-----------------------------------ATTAAAATTAA------------------------------------------------------------ATATAAGTTACACTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2990.111010000
.......................................................................................................................................................................................................................................................................TAAAACTA-AAAA------T-TGAAACTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.101010000
..................................................................................................................................................................................................................................................................................................................................................................................TTC---------------------------------------------------T-----------------------GCTTAATTTAAATTGTC...................................................................................................................................................................................................................................................................................21100.101100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTCAAGTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------GGCGGG---GA..........................................................................................................21100.101100000
droBip1
ACTCG-ACTATAGCCGTCCTTTCTTGT--------------------------TTAT-TGT--------------------ATATTAT-----------------------------------ATAAAAAATAG------------------------------------------------------------ATCA---------------------------------ATAAATAT-ATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATTGAT------------TGATATTATCCATATATAATATA------------AAATA---TTT-AAAAAAAATATAT----------------------------------------------------------------------------------------------------------------------------TTTTTTTAAATT--------------ATA----------------------------------------------------TATAGTAGTTTTTAACATTTAACASizeHit CountTotal NormTotal
No Reads
dp5
TATTA-TATTTATT-TA---------------------TT--------------------------T-A-----------TTTATTAA-----------------------------------ATTAACAATTA---------------TCTGCTAATAATGGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATTAC---------AAAAGCAGGAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................TT--------------------------T-A-----------TTTATTAA-----------------------------------ATTAACAATTA---------------TCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.3330000000300
.......................................T--------------------------T-A-----------TTTATTAA-----------------------------------ATTAACAATTA---------------TCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.1110000000100
........TTTATT-TA---------------------TT--------------------------T-A-----------TTTATTAA-----------------------------------ATTAACAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28120.0810000000100
.....................................................................................TAA-----------------------------------ATTAACAATTA---------------TCTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.0710000000100
............................................................................................................................................................ATAATGGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATTAC---------A...........19190.0510100000000
droPer2
TTTAT-ATGTATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAATTTA--TAC--A---------------------------------------------------------------------------T-----------------------ATGTAATATTTGTATATTTTGTTATG-------------------------------GT----------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTATTATTTTTTAAGAGTTTCCAT---------------------------------------------------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TGATT-TATTTGAA-GA------------------TTATT--------------------------TGT-----------TATCAACA-----------------------------------GTCAAGAATCA------------------------------------------------------------ATCT---------------------------------ATTATTAC-ACCCGTAAG----------------------------------------------------------TGTATAT-------------AT-----------------------------------------------------------------------TTATATAAAAAAGCAGATTATTAACATGTACAGACAATTTTGTCTTAAGAACAAAAATTTGAAATTTCGTTGGA-------------------------------AA----------------------------------------------------------------------------------------------------------------------------------------------------------AGATTATTTT-TCT----------------------------------------------------------------TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TTTTA-TTTTTT-------------------------ATTTGGATTTATTTAATTTA---------TAT--------------------------------------------------------TTAAAGTTA--------------------------------------------------------------------------------------------------TTTTTAT-T-----------------------------------------------------TAATTTCATTTAGTTTATTT-------------ATTGAA----AAT------GA----------------GCAAATATA---------------------------------------------------T-----------------------GTTTAATTTTATTTTTTACTTTTTTT------------ATAAA---CTT-TATTTTAAT----------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTTTATT-------------------------------------------------------------------TSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
GTCTCGACTAGAGC-TTTCTTACTTGTTTCAATTTTAATT--------------------------CGA-----------TATGTCAA-----------------------------------A-CAATTGTTG----------------------CCAAGGTCACTTAGGGATCACACAAAGCCTTAAAGCCAGCCT---------------------------------TTTGTTAT-A---------------------------------------------------------TATCGCATATCTTCAC-------------ATA--------TTA--TAT--G---------------------------------------------------------------------------A------------------------AGCCAATTCATTTATTATTATTATT------------ACAAT---TTT-TTTTTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------GCATCTTT-------CTTACTCTCAGCAT-----------T-------------------------------------CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................ATA--------TTA--TAT--G---------------------------------------------------------------------------A------------------------AGCCAATTG..........................................................................................................................................................................................................................................................................................2018.008700001
.......................................................................................................................................................................................................................................................................................................................................ATA--------TTA--TAT--G---------------------------------------------------------------------------A------------------------AGCCAATT...........................................................................................................................................................................................................................................................................................1915.005500000
.........................................................................................................................................................................................................................................................................................................................................A--------TTA--TAT--G---------------------------------------------------------------------------A------------------------AGCCAATTG..........................................................................................................................................................................................................................................................................................1820.501100000
..CTCGACTAGAGC-TTTCTTACTTGTTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.204000004
droGri2
GCTCG-ACTACAGT-ACTCTTACTTGT--------------------------TTTATTAG--------------------AAACTGCATAAATTTACTTATTTGTTTAATATTTATTATTTACTATAAAATTAATTTGA-GTTTGCTAC----------------------------------------------------------TTTAATTAACTTATCTATTATCTAATATTTT-TCATCAGAAT--AAATGATAAGTATTAAATAATAA--------------------------------------------------------AC----AAT------AA----------------ATAAATGTA---------------------------------------------------T-----------------------ATAAAAATGTAATATTTATTACAGAA------------ATAAT---ATA-TGTTTATAT----------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTTTGTATT-----------------------------------------------------------------TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 03:21 PM