ID:

dsi_16826

 Coordinate:

3r:13844347-13844534 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.8 -34.7 -34.7

Flybase annnotation

Antisense to five_prime_UTR [3r_13844110_13844353_-]; Antisense to exon [3r_13843145_13844353_-]; five_prime_UTR [3r_13844416_13844600_+]; exon [3r_13844416_13844681_+]

No Repeatable elements found

Sense Strand Reads

-----------------------------------------------------------------------------------------------------------------------#########################################################################################################################################################################
AAGTTAATGTAAACATACTGGGATAAACATAATTTGGACAAAGACCGAAGGTAATTGAAATTATCCAAACAATACAACTGTCAATTTGCATCGTAGTCACCTGTGACATATCCGTATTTCTTGCTTGGATATTTTTTGTCTACATCTAGCTATTTTCCATATTATCCAGTGCTATCGATAAGCAGTGACTGGTCGCACTGGTGGCTGTCGATACATTTTCATCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCAGCTGCGCATTTGTTTTGTTTTCGCAAATTATCC
**************************************************..((((((......................))))))((.(((((((((((((((((((((((((((.....)))..)))))).......(((....))).................((.((((.......)))).))....))))))..)))))))).)))).)).......................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 M053
female body
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 SRR902009
testis
 M024
male body		 SRR553487
NRT_0-2 hours eggs
.................................................................................................................................................................................................................................................CACACGTGCTAGCAGCTG............................. 18 0 1 6.00 6 6 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................CAGCACACGTGCTAGCAGCTG............................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................CACGTGCTAGCAGCTGCG........................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................AGCAGCTGCGCATTTGTTT.................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................ACACGTGCTAGCAGCTGCGC.......................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTCATCTCTCTTCTTCTTCAGCAGCAC............................................ 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................................................AGCAGCTGCGCATTTGTTTT................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................TGTTTTGTTTTCGCAAA...... 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................TAGCAGCTGCGCATTTGTTTTGTTTT............ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................AGCAGCTGCGCATTTGTTTTGTTTTC........... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................TCTTCTTCAGCAGCACACGTGCTAGC.................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................AGCAGCACACGTGCTAGCAGCTG............................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................AGCACACGTGCTAGCAGCTGCG........................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................ACTGGTCGCACTGGTGGCTGT................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................AGCACACGTGCTAGCAGCTG............................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................ACACGTGCTAGCAGCTGCGCATT....................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........AAAAATACTGGGATGAACATC................................................................................................................................................................................................................................................................. 21 3 8 0.13 1 1 0 0 0 0 0 0 0 0
...........AAAATACTGGGATGAACATC................................................................................................................................................................................................................................................................. 20 3 14 0.07 1 0 0 0 0 0 0 0 1 0
.....................................................................................CTGCATCGTTGTCATCTGTG....................................................................................................................................................................................... 20 3 15 0.07 1 0 0 0 0 0 0 0 1 0
..................................................................................................................TATTTCTGGCTTCGATA............................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................................................................ACACGTGCCAGCAGCCG............................. 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

#########################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTCAATTACATTTGTATGACCCTATTTGTATTAAACCTGTTTCTGGCTTCCATTAACTTTAATAGGTTTGTTATGTTGACAGTTAAACGTAGCATCAGTGGACACTGTATAGGCATAAAGAACGAACCTATAAAAAACAGATGTAGATCGATAAAAGGTATAATAGGTCACGATAGCTATTCGTCACTGACCAGCGTGACCACCGACAGCTATGTAAAAGTAGAGAGAAGAAGAAGTCGTCGTGTGCACGATCGTCGACGCGTAAACAAAACAAAAGCGTTTAATAGG
**************************************************..((((((......................))))))((.(((((((((((((((((((((((((((.....)))..)))))).......(((....))).................((.((((.......)))).))....))))))..)))))))).)))).)).......................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
................................................................GGCTTGTTATGTTGAGAGT............................................................................................................................................................................................................. 19 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................TGTCATGCCGACAGTTAAACG....................................................................................................................................................................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0
................TGACCCTATTTGTATT................................................................................................................................................................................................................................................................ 16 0 2 1.00 2 1 0 0 1 0 0 0 0
...................................................................................................................................AAAAAGCAGATGGAGATCG.......................................................................................................................................... 19 2 2 0.50 1 0 0 1 0 0 0 0 0
........................................................................ATGTTGGGAGTTAAACGT...................................................................................................................................................................................................... 18 2 5 0.40 2 2 0 0 0 0 0 0 0
................................................................................................................................................................TCAGAGGTCACGATCGCTAT............................................................................................................ 20 3 5 0.20 1 0 0 1 0 0 0 0 0
................................................................................................................................................AGATCGATAAAAGGT................................................................................................................................. 15 0 6 0.17 1 0 0 0 0 0 1 0 0
...............................................................................................................................CTCTAAAAAAGAGATGTTGA............................................................................................................................................. 20 3 6 0.17 1 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................AGAGAAGTAGAAGTCG................................................. 16 1 7 0.14 1 0 0 0 1 0 0 0 0
.....................................................................................................................................AAAACATATGTCGATCGTTAA...................................................................................................................................... 21 3 18 0.06 1 0 0 0 0 0 0 1 0
...................................................................................................................................AAAAAAAAGATGTACAACGAT........................................................................................................................................ 21 3 20 0.05 1 0 0 0 1 0 0 0 0
....................................................................................................................................AAAAACCGGTGTAGATTGAT........................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................................TAAAGAAAAAAAGAAGTCGTC............................................... 21 3 20 0.05 1 0 0 1 0 0 0 0 0
..............................................................TAGGTTTGTTATGGT................................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:13844297-13844584 + dsi_16826 AAGTTAATGTAAACATACTGGGATAAACATAATTTGGACAAAGA-CCGAAGGTAATTGAAATTA-------------TCCA---AACAATACAACTGT--------------------------------------CAATTTGCATC-GTAGTCACCTGTGACAT-------------------------------------------------------------------------------ATCCGTATTTCTTG--------CTTGGATAT-----TTTTTGTCTACATCTAGCTATTTTCCATAT---------------TA--------------------------------TCCAGTGCTATCGAT-AAGCAGTGA----CTGGTCGCACTGGTGGCTGTCGATACATTTTCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCAGC--TGCGCATTTGTTTTGTTTTCGCAAATTA-TCC
droSec2 scaffold_0:14706285-14706573 + AAATTAATGTAAACATACTGGGCAAAACATAATTTGGACAAAGA-CCGAATGTAATTGAAATTA-------------TCAA---AACAATACAACTGT--------------------------------------CAACTGGCATC-GTAGTCACCTGCGACTT-------------------------------------------------------------------------------ATCCGTATTTCTTG--------CTTGGATAT-----TTTTTGTCTACATGTAGCTATTTTCCATAT---------------TA--------------------------------TCCAGTGCTATCGATTAAGCAGTGA----CTGGTCGCACTGGTGGCTGCCGATAAATTTTCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCAGC--TGCGCATTTGTTTTGTTTTCGCAAATTA-TCC
dm3 chr3R:7257228-7257516 - AAGTTAATGTAAACATACTGGGAAAAACATGATTTGGACAAAGA-CCGAAGGTAATTGAAATTA-------------TCAA---AACAATACAACTGT--------------------------------------CAACTGGTATC-GCAGTCACTTGCAATTT-------------------------------------------------------------------------------ATACGTATTTCTTG--------CTTGGATAT-----TTTTTGTCTACATCTAGCTATTTTCCATGT---------------TA--------------------------------GCCAGTGTTATCGAT-AAGCAGTGA----CTGGTCGCACTGCTGACTGCCGATACATTTTCA------TATTTCTTCTTCTTCAGCAGCACACGTGCTAGCAGCT-TGCGCATTTGTTTTGTTTTCGTAATTTA-TCC
droEre2 scaffold_4770:14363377-14363722 + AAATTAATGTAAACATATTGGGAACAACATAATTTTCACAAAGA-CCGAGGGTAATTGAAATTGAAATAATTTAATTTCAAGGGAACAATACATCTGA--------------------------------------------GTATT-C--CTGTCCTGTGACTGTAGTTTTCAT------------------------------------------------------ATTTTAAACGTACTAATCAGTAGTTCTTGTTATTATTCTTGGATATTCAAATTTTTGTCCACTTCTAGCTATTT-CCATGTGGTATCGACA-----TG--------------------------------TCTAGTGGTATCGAT-AAGCAGTGACTCTCTGGTAACACTGCTGGCTACCGATATATTTTCA------ACTTTCTTCTTCTTCAGCTGCACACGTGCTAGCTGTT-TGCGCCTTTGTT-T-TTTTCGCAAATTA-TTC
droYak3 3R:11290360-11290689 - AA-----TGTAAACATATTGGGAAAGACATAATTTTGGGAAAAACCCGGAGTTAATTACAATTTAAATAACTTAATTCCAAAGCAACAATACATCTCT--------------------------------------CAGATCGCTTA-ATACCCTACTGTGACTTTAATTTTCAT------------------------------------------------------ATTTCAAACCAACTAGTCAGTACT----T--------CTTGGATATATAAGTTTTTGGCTACTTCTAGCTATTTTCAATGT---------------TT--------------------------------TGTAGCGTTATCGAT-AAGCAGTGACCCTCTGGTCACACTGCCTGGTACCGATATATTTTCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCT-TGCGCTTTTGTTTT-TTTTCGCAAATTA-TTC
droEug1 scf7180000409797:882055-882431 - ATATTATATTAAACAT-TTGGGAAAACCTCAATCTGAATTAGCT--TTGGGGAAACTTAAATCTA------------G------------------------------TATAATCTTAAAAACCTGACTTCATCAGCAAGTCAGATA-GAAACCACCTGTGGGGGTAATTTGTATA---GAATTATGATTTGTTAAAAATAAAGCAACAAATATGAAAAAAAGTTTAAAATTTAAATAAGGTTATTTAGGATT----T--------ATTGTTTA-AAAAATAATTAATAATTACTAAATATCGCAATTGA---------------CT------------------------------TGC-TTACGTTATCGAT-AA-TTGTCTCTTCCAGGTCATACTGGTAGACATCGATACATTTTCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCT-TGCGC-TTTGTTTT-TTTTCGCAAATTA-TCC
droBia1 scf7180000302075:3505753-3505830 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACACTTTCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCT-TGCGC-TTTGTT-T-TTTTCGCAAATTA-TCC
droTak1 scf7180000415763:182741-182874 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTTCTAGCTATTTTCTAGCT---------------CC--------------------------------T-CTATGTTATCGAT-AAATGGTCTGTCGCTGGTTACACTGC-----------------TCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTTGCTGCC-TGCGC-TTTGTTTT-TCTTCGCAAATTA-TCC
droEle1 scf7180000491080:2443844-2444216 + AAATTTAGGGAA-------GAAGAACACATAGTTCGAAC-------TAGAGGGAACTGAAATTTA------------T---------TATGGAGCTGAGTAGCCCTTTTATAATATTTAAAAATTGATAACGTT-GC-------ATTTAAATTAATTTATGAAGGTGGTTAATTTAAATGAAATAAAATGAGTTAAAAATG-----------------------------------TATGGTTAA------------T--------ATTCATTA-CAAT-ATAATGAATATAAATAGCTGCTTTCGA-C----------ATAGCTATTTAACCATTTTTTAATTTTTGCTAATAGTCAAT-TTATGTAATCGAT-AAATGGTCATACCCTGGTCACACTGCTCGCCATCGGTATATTTTCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCT-TGCGC-TTTGTT-T-TTTTCGCAAATTA-TTC
droRho1 scf7180000779097:61668-61848 + TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTT--------TTTTCATAT-----ATAACCACTATTTTTAGCTATTTTTAA-G----------CCAGCTCCTTA--------------------------------TTTGTAATCGAT-GGGTGGTCACACCCTGGTCACACTGTTCGCTATCGATATATTTTTA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCT-TGCGC-TTTGTTTT-TTTTCGCAAATTA-TTC
droFic1 scf7180000453488:596333-596426 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTCACACTCCTCGACATCGATATATTTTCA------TCCCTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCT-TGCGT-TTTG-----TTTTCGTAAATTA-TTC
droKik1 scf7180000302256:744797-744900 - T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAC-AA----------AATGGTCACACT-CTCGATATCGATACATCTTCG------T---TCTTCTTCTTCAGCAGCACACGTGCTGGCTGTT-TGCGT-TTTGTT-T-TTTTCGCAGATTA-TTC
droAna3 scaffold_13340:10569680-10569818 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAAAAT---------------AT--------------------------------TACGAGACTATCGAT-ATACGTAAATCGTTTCATAACACTGTTAATTGTCGATATACTTTCC------TCGTTCTTCTTCTTCAGCAGCACACGTGCTTGCTGCC-TGCGT-TTTGTTAT-TTTTCGCAAATTA-TTC
droBip1 scf7180000396374:505031-505123 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACTGTTTATTGTCGATATACTTTTC------TCGTTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCC-TGCGT-TTTGTTAT-TTTTCGCAAATTA-TTC
dp5 2:29170689-29170748 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTTCTTCTTCAGCCACACACGTGCTAG-TGC--TGCGC-TTTGTT----TTTCGCAAATTAAATT
droPer2 scaffold_6:4494671-4494730 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTTCTTCTTCAGCCGCACACGTGCTAG-TGC--TGCGC-TTTGTT----TTTCGCAAATTAAATT
droVir3 scaffold_13047:3197483-3197558 + A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCTCTACAAGTATTCCTCCTTTGCAGCGCACGTGCTGACAGCATTGCGT-TTTA-----TTTTTACAAGTTA-TTT
droMoj3 scaffold_6540:20240109-20240169 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACCTTTCTTTAACAACACACGTGTTGATAGTTGTGCGT-TTTA-----TTTTTACAAATTA-TTT
droGri2 scaffold_15074:7571252-7571318 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTA------TTCCTCTTCTTCCTCAGCAGCACATGTGCTGACTGTTTTGCGT-TTTA-----TTTTTACAAGTTA-TTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGTTAATGTAAACATACTGGGATAAACATAATTTGGACAAAGA-CCGAAGGTAATTGAAATTA-------------TCCA---AACAATACAACTGT--------------------------------------CAATTTGCATC-GTAGTCACCTGTGACAT-------------------------------------------------------------------------------ATCCGTATTTCTTG--------CTTGGATAT-----TTTTTGTCTACATCTAGCTATTTTCCATAT---------------TA--------------------------------TCCAGTGCTATCGAT-AAGCAGTGA----CTGGTCGCACTGGTGGCTGTCGATACATTTTCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCAGC--TGCGCATTTGTTTTGTTTTCGCAAATTA-TCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACGTGCTAGCAGC--TG..............................1816.00660000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCACACGTGCTAGCAGC--TG..............................2112.00220000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGCTAGCAGC--TGCG............................1811.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC--TGCGCATTTGTTT...................1911.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGTGCTAGCAGC--TGCGC...........................2011.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCA------TCTCTCTTCTTCTTCAGCAGCAC...............................................2711.00100000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC--TGCGCATTTGTTTT..................2011.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTTGTTTTCGCAAA.......1711.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAGC--TGCGCATTTGTTTTGTTTT.............2611.00100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC--TGCGCATTTGTTTTGTTTTC............2611.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTTCAGCAGCACACGTGCTAGC.....................................2611.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCACACGTGCTAGCAGC--TG..............................2311.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACGTGCTAGCAGC--TGCG............................2211.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................A----CTGGTCGCACTGGTGGCTGT.........................................................................................2111.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACGTGCTAGCAGC--TG..............................2011.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGTGCTAGCAGC--TGCGCATT........................2311.00100000000001000000
droSec2
AAATTAATGTAAACATACTGGGCAAAACATAATTTGGACAAAGA-CCGAATGTAATTGAAATTA-------------TCAA---AACAATACAACTGT--------------------------------------CAACTGGCATC-GTAGTCACCTGCGACTT-------------------------------------------------------------------------------ATCCGTATTTCTTG--------CTTGGATAT-----TTTTTGTCTACATGTAGCTATTTTCCATAT---------------TA--------------------------------TCCAGTGCTATCGATTAAGCAGTGA----CTGGTCGCACTGGTGGCTGCCGATAAATTTTCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCAGC--TGCGCATTTGTTTTGTTTTCGCAAATTA-TCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGCTAGCAGC--TGCG............................1812.0020011
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACGTGCTAGCAGC--TGCGC...........................2111.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACGTGCTAGCAGC--TGCG............................2011.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACGTGCTAGCAGC--TGCGC...........................2311.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCACACGTGCTAGCAGC--TGCG............................2311.0010001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGTGCTAGCAGC--TGCG............................1911.0010001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGCTAGCAGC--TGCGCA..........................2011.0010001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGTGCTAGCAGC--TGC.............................1811.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCAGCACACGTGCTAGC.....................................2111.0010001
dm3
AAGTTAATGTAAACATACTGGGAAAAACATGATTTGGACAAAGA-CCGAAGGTAATTGAAATTA-------------TCAA---AACAATACAACTGT--------------------------------------CAACTGGTATC-GCAGTCACTTGCAATTT-------------------------------------------------------------------------------ATACGTATTTCTTG--------CTTGGATAT-----TTTTTGTCTACATCTAGCTATTTTCCATGT---------------TA--------------------------------GCCAGTGTTATCGAT-AAGCAGTGA----CTGGTCGCACTGCTGACTGCCGATACATTTTCA------TATTTCTTCTTCTTCAGCAGCACACGTGCTAGCAGCT-TGCGCATTTGTTTTGTTTTCGTAATTTA-TCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGCAGCT-TGCGCATTTGTTTT..................23113.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGCTAGCAGCT-TGCGC...........................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAGCT-TGCGCATTTGTTTTGTT...............2515.0050000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACACGTGCTAGCAGCT-................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100100000000000001000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCA------TATTTCTTCTTCTTCAGCAGCA................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCACACGTGCTAGCA....................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTCAGCAGCACACG............................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000020000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGCTAGCAGCT-TGCGC...........................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCACACGTGCTAGCAGCT-TGCG............................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCACACGTGCTAGCAGCT-TGCG............................2513.0030000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACGTGCTAGCAGCT-TGCG............................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACGTGCTAGCAGCT-TGCGCATTTG......................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTCTTCAGCAGCACACG............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGCAGCT-TGCGCATTT.......................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCAGCAGCACACGTGCTAGCAGC..................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCTTCTTCAGCAGCACACGTGC.........................................2612.0020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAGCACACGTGCTAGCA....................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTCTTCTTCAGCAGCACACGTGC.........................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCT-TGCGCATTTGTT....................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTCTTCTTCTTCAGCAGCACACG............................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACGTGCTAGCAGCT-................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGTGCTAGCAGCT-TGCG............................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACGTGCTAGCAGCT-TGCGCA..........................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGTGCTAGCAGCT-TGC.............................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................A------TATTTCTTCTTCTTCAGCAGCACAC.............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................A------TATTTCTTCTTCTTCAGCAGCAC...............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCTAGCAGCT-TGCGCATTTG......................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TGCGCATTTGTTTTGTTTTCGTAATT......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACGTGCTAGCAGCT-TGCGCATTTT......................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAGCT-TGCGCATTTGTTTTG.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCAGCAGCACACGTGCTAGCAGCT-................................2811.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGTGCTAGCAGCT-TG..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGCAGCT-TGCGCATTTG......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCTTCTTCAGCAGCACACG............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACGTGCTAGCAGCT-TGCGCATT........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTCTTCAGCAGCACACGTGC.........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCATTTGTTTTGTTTTCGTAATT......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGCTAGCAGCT-TGCG............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TGCGCATTTGTTTTGTTTTCGTAAT.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTTCTTCTTCAGCAGCACACG............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT-TGCGCATTTGTTTTGT................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATTTGTTTTGTTTTCGTAATTTA-TC.2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGCTAGCAGCT-TGCGCAT.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTAGCAGCT-TGCGCATTTG......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TTCA------TATTTCTTCTTCTTCAGCAGCG................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGCTAGCAGCT-TGCGCATTTGT.....................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................T-----TTTTTGTCTACATCTAGCTAT....................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCTTCTTCAGCAGCACA..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTTCTTCAGCAGCACACGTGCTA.......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGCAGCT-TGCGCATTTG......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TGCGCATTTGTTTTGTTTTCGTAAA.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAGCT-TGCGCATTTGTTTTGT................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCACACGTGCTAGCAGCT-TGCGCA..........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACGTGCTAGCAGCT-TGCGT...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTCAGCAGCACACGTGC.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCATTTGTTTTGTTTTCGTAATT......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCAGCAGCACACGTGCTAGCAGC..................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGCTAGCAGCT-TGCGCA..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACGTGCTAGCAGCT-TGCGCAT.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACGTGCTAGCAGCT-TG..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCAGCAGCACACGTGCTAGC.....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCATTTGTTTTGTTTTCGTA.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAGCT-TGCGCATTTGTT....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCACACGTGCTAGCAGCT-TG..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
.........TAAACATACTGGGAAAAACATGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCT-TGCGCATTTGTTTTG.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTCAGCAGCACACGTG..........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-TGCGCATTTGTTTTGTTT..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTTCAGCAGCACACGTG..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCA------TATTTCTTCTTCTTCAGCA...................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCAGCAGCACACGTGCC........................................2011.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT-TGCGCATTTGTTTTGTTTTCGT..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCAGCACACGTGCTAGCAGCT-TG..............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACACGTGCTAGCAGCT-TG..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAGCACACGTGCTAGCAGCT-TGCG............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGCAGCT-TGCGCATTTGTTTTGTT...............2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGCAGCACACGTGCTAGCAGCT-TG..............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCTTCAGCAGCACACG............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTGTTTTGTTTTCGTAAT.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTTTTCGTAATTTA-TC.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTAGCAGCT-TGCGCA..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTTGTTTTCGTAAT.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
droEre2
AAATTAATGTAAACATATTGGGAACAACATAATTTTCACAAAGA-CCGAGGGTAATTGAAATTGAAATAATTTAATTTCAAGGGAACAATACATCTGA--------------------------------------------GTATT-C--CTGTCCTGTGACTGTAGTTTTCAT------------------------------------------------------ATTTTAAACGTACTAATCAGTAGTTCTTGTTATTATTCTTGGATATTCAAATTTTTGTCCACTTCTAGCTATTT-CCATGTGGTATCGACA-----TG--------------------------------TCTAGTGGTATCGAT-AAGCAGTGACTCTCTGGTAACACTGCTGGCTACCGATATATTTTCA------ACTTTCTTCTTCTTCAGCTGCACACGTGCTAGCTGTT-TGCGCCTTTGTT-T-TTTTCGCAAATTA-TTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACGTGCTAGCTGTT-TGC.............................2013.0030001020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACACGTGCTAGCTGTT-TGC.............................2212.0020200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTCAGCTGCACACGTG..........................................2012.0020000110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACACGTGCTAGCTGTT-TGCGCCT.........................2611.0010010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCTTCTTCTTCAGCTGCACACGTGCT........................................2911.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT-TGCGCCTTTGTT-T-TTTTCGCAA........2511.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGTGCTAGCTGTT-TGCGCC..........................2211.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACGTGCTAGCTGTT-TT..............................1911.0010001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACGTGCTAGCTGTT-TGCGCCTTT.......................2611.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGTGCTAGCTGTT-TGC.............................1911.0010001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTTCAGCTGCACACGTGCTAGC.....................................2611.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACGTGCTAGCTGTT-TGCGC...........................2211.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGCTAGCTGTT-TGCGC...........................1911.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCTTCTTCAGCTGCACACGT...........................................2411.0010100000
droYak3
AA-----TGTAAACATATTGGGAAAGACATAATTTTGGGAAAAACCCGGAGTTAATTACAATTTAAATAACTTAATTCCAAAGCAACAATACATCTCT--------------------------------------CAGATCGCTTA-ATACCCTACTGTGACTTTAATTTTCAT------------------------------------------------------ATTTCAAACCAACTAGTCAGTACT----T--------CTTGGATATATAAGTTTTTGGCTACTTCTAGCTATTTTCAATGT---------------TT--------------------------------TGTAGCGTTATCGAT-AAGCAGTGACCCTCTGGTCACACTGCCTGGTACCGATATATTTTCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCT-TGCGCTTTTGTTTT-TTTTCGCAAATTA-TTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCAGCAGCACACGTGCTAGC.....................................2411.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-TGCGCTTTTGTTTT-TTTTC............2111.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCTTCAGCAGCACACGTGCTAGC.....................................2711.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACACGTGCTAGCTGCT-TGC.............................2111.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACGTGCTAGCTGCT-TGCGCTTTTG......................2711.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTTCTTCTTCAGCAGCACACG............................................2411.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCA------TCTCTCTTCTTCTTCAGCAGC.................................................2711.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACGTGCTAGCTGCT-TGCGCTTTTGTT....................2911.00100100000000
droEug1
ATATTATATTAAACAT-TTGGGAAAACCTCAATCTGAATTAGCT--TTGGGGAAACTTAAATCTA------------G------------------------------TATAATCTTAAAAACCTGACTTCATCAGCAAGTCAGATA-GAAACCACCTGTGGGGGTAATTTGTATA---GAATTATGATTTGTTAAAAATAAAGCAACAAATATGAAAAAAAGTTTAAAATTTAAATAAGGTTATTTAGGATT----T--------ATTGTTTA-AAAAATAATTAATAATTACTAAATATCGCAATTGA---------------CT------------------------------TGC-TTACGTTATCGAT-AA-TTGTCTCTTCCAGGTCATACTGGTAGACATCGATACATTTTCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCT-TGCGC-TTTGTTTT-TTTTCGCAAATTA-TCCSizeHit CountTotal NormTotal
No Reads
droBia1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATACACTTTCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCT-TGCGC-TTTGTT-T-TTTTCGCAAATTA-TCCSizeHit CountTotal NormTotal
No Reads
droTak1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACTTCTAGCTATTTTCTAGCT---------------CC--------------------------------T-CTATGTTATCGAT-AAATGGTCTGTCGCTGGTTACACTGC-----------------TCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTTGCTGCC-TGCGC-TTTGTTTT-TCTTCGCAAATTA-TCCSizeHit CountTotal NormTotal
No Reads
droEle1
AAATTTAGGGAA-------GAAGAACACATAGTTCGAAC-------TAGAGGGAACTGAAATTTA------------T---------TATGGAGCTGAGTAGCCCTTTTATAATATTTAAAAATTGATAACGTT-GC-------ATTTAAATTAATTTATGAAGGTGGTTAATTTAAATGAAATAAAATGAGTTAAAAATG-----------------------------------TATGGTTAA------------T--------ATTCATTA-CAAT-ATAATGAATATAAATAGCTGCTTTCGA-C----------ATAGCTATTTAACCATTTTTTAATTTTTGCTAATAGTCAAT-TTATGTAATCGAT-AAATGGTCATACCCTGGTCACACTGCTCGCCATCGGTATATTTTCA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCT-TGCGC-TTTGTT-T-TTTTCGCAAATTA-TTCSizeHit CountTotal NormTotal
No Reads
droRho1
TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTT--------TTTTCATAT-----ATAACCACTATTTTTAGCTATTTTTAA-G----------CCAGCTCCTTA--------------------------------TTTGTAATCGAT-GGGTGGTCACACCCTGGTCACACTGTTCGCTATCGATATATTTTTA------TCTCTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCT-TGCGC-TTTGTTTT-TTTTCGCAAATTA-TTCSizeHit CountTotal NormTotal
No Reads
droFic1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTCACACTCCTCGACATCGATATATTTTCA------TCCCTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCT-TGCGT-TTTG-----TTTTCGTAAATTA-TTCSizeHit CountTotal NormTotal
No Reads
droKik1
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGAC-AA----------AATGGTCACACT-CTCGATATCGATACATCTTCG------T---TCTTCTTCTTCAGCAGCACACGTGCTGGCTGTT-TGCGT-TTTGTT-T-TTTTCGCAGATTA-TTCSizeHit CountTotal NormTotal
No Reads
droAna3
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAAAAT---------------AT--------------------------------TACGAGACTATCGAT-ATACGTAAATCGTTTCATAACACTGTTAATTGTCGATATACTTTCC------TCGTTCTTCTTCTTCAGCAGCACACGTGCTTGCTGCC-TGCGT-TTTGTTAT-TTTTCGCAAATTA-TTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTAT-TTTTCGCAAAT......1911.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTGCTGCC-TGCGT-TTTGTTAT-TA...............2611.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGCAGCACACGTGCTTGCTGCC-C...............................2711.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACACGTGCTTGCTGCC-TGCGT-TTTGT.....................2811.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTGCTGCC-TGCGT-TTTGTTAT-TT...............2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCC-TGCGT-TTTGTTAT-TTTTCGCAAAT......2811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACACGTGCTTGCTGCC-TGC.............................2111.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACACGTGCTTGCTGCC-TGCGT-TTT.......................2711.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTGCC-TGCGT-TTTGTTAT-TTTTC............2611.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCTTCAGCAGCACACGTGCTTGC.....................................2711.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCTTGCTGCC-TGCGT-TTTGTT....................2411.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCC-TGCGT-TTTGTTAT-.................1911.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................TACTTTCC------TCGTTCTTCTTCTTCAGCAG..................................................2811.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGCTTGCTGCC-TGCGT-TTTGT.....................2411.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGCC-TGCGT-TTTGTTAT-.................2011.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACACGTGCTTGCTGCC-TGCGT-T.........................2411.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCC-TGCGT-TTTGTTAT-TTTTCG...........2211.001000001
droBip1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACTGTTTATTGTCGATATACTTTTC------TCGTTCTTCTTCTTCAGCAGCACACGTGCTAGCTGCC-TGCGT-TTTGTTAT-TTTTCGCAAATTA-TTCSizeHit CountTotal NormTotal
No Reads
dp5
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTTCTTCTTCAGCCACACACGTGCTAG-TGC--TGCGC-TTTGTT----TTTCGCAAATTAAATTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGCTAG-TGC--TGCGC-TT........................2012.0020200000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGTGCTAG-TGC--TGCG............................1811.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTCTTCAGCCACACACGT...........................................2211.0010100000000
droPer2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTTCTTCTTCAGCCGCACACGTGCTAG-TGC--TGCGC-TTTGTT----TTTCGCAAATTAAATTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAG-TGC--TGCGC-TTTGTT----TTTCGCA.........2511.001000001
droVir3
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCTCTACAAGTATTCCTCCTTTGCAGCGCACGTGCTGACAGCATTGCGT-TTTA-----TTTTTACAAGTTA-TTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGT-TTTA-----TTTTTACA.........1911.001000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAGCGCACGTGCTGACAGCATTGC.............................2811.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCATTGCGT-TTTA-----TTTTTACAA........2611.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCTCCTTTGCAGCGCACGT...........................................2211.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTTTGCAGCGCACGTGCTGA......................................2311.001000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGACAGCATTGCGT-TTTA-----TTTTTACAA........2911.001000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGACAGCATTGCGT-TTT.......................1911.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATTGCGT-TTTA-----TTTTTACAA........2311.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGACAGCATTGCGT-TTTA-----TTT..............2311.001000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCGCACGTGCTGACAGCATTG..............................2511.001000000000000000000000000000000010000000000000000000000000000000
droMoj3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACCTTTCTTTAACAACACACGTGTTGATAGTTGTGCGT-TTTA-----TTTTTACAAATTA-TTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGTTGTGCGT-TTTA-----TTTTTACA.........2512.002000002
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTGCGT-TTTA-----TTTTTACAA........2311.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGTGTTGATAGTTGTGCG............................2111.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTGCGT-TTTA-----TTTTTACA.........2211.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTGTGCGT-TTTA-----TTTTTACAAATT.....2711.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGT-TTTA-----TTTTTACAAAT......2211.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGT-TTTA-----TTTTTACAA........2011.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGT-TTTA-----TTTTTACAA........1911.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTTGTGCGT-TTTA-----TTTTTACAAAT......2711.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTTGTGCGT-TTTA-----TTTTTACAAATT.....2811.001100000
droGri2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTA------TTCCTCTTCTTCCTCAGCAGCACATGTGCTGACTGTTTTGCGT-TTTA-----TTTTTACAAGTTA-TTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:32 PM