ID:

dsi_16811

 Coordinate:

3r:11927354-11927503 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.19 -1.89 -1.54

Flybase annnotation

CDS [3r_11926202_11927332_-]; five_prime_UTR [3r_11927333_11927488_-]; exon [3r_11925841_11927488_-]

No Repeatable elements found

Sense Strand Reads

-----------------------------------------------------------------#########################################################################################################################################################################################
TAATTTTAAGGATTCACCAATCCACGCAAAGATACTCTTTCTTTAAAAGTCATACATTTTCTGAGGCAACACCTACACGAATTTCATAATTTCACAATTACACACAAGATCACAATTGAAATCCATACCCAATCCGAGTACCGTAACCCACTTCCAACTTCTCCTTCTAAAAACCGCCTCCGTTCTCGTTGTTGTTGCAGTGAAAACAGCCAGTAGCCAAGATGTGTGACGATGAGGTTGCCGCATTGGT
*************************************************************************************************************************************.((((.((........................................)).))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 GSM343915
embryo
 O001
Testis
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553488
RT_0-2 hours eggs
.....................................................................................................................................................................................GTTCTCGTTGTTGTTGCAG.................................................. 19 0 1 7.00 7 7 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TCCGTTCTCGTTGTTGTTGCAG.................................................. 22 0 1 5.00 5 4 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................GATGAGGTTGCCGCATTG.. 18 0 1 5.00 5 5 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................ACAGCCAGTAGCCAAGATGTGTGAC.................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AGTAGCCAAGATGTGTGACG................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AAACAGCCAGTAGCCAAGCTGTGTGA..................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................AACAGCCAGTAGCCAAGATGTGTGA..................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GATGTGTGACGATGAGGT............ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................CCGTTCTCGTTGTTGTTGCAG.................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................CCGAGTACCGTAACCCACTTCCAA............................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CGATGAGGTTGCCGCATTG.. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATGTGTGACGATGAGGTTGCCGCATTG.. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................AACAGCCAGTAGCCAAGATGTGTGAC.................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AAGATGTGTGACGATGAGGTTGCCGCA..... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................AACGTGAAAACAGCCAGTAGC................................. 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................GTTGTTGCAGTTAAAA............................................ 16 1 12 0.92 11 0 0 0 0 8 0 2 0 1
........................................................................................................................................................................................................TGAACACAGCCGGTATCCA............................... 19 3 15 0.27 4 0 0 0 0 0 0 0 4 0
.................................................................................................................................................................ACCTTCGAAAAACCGCC........................................................................ 17 2 19 0.16 3 0 0 0 0 0 3 0 0 0
.................................................................................................................................................................ACCTTCGAAAAACCGC......................................................................... 16 2 20 0.15 3 0 0 0 0 0 3 0 0 0
...............................................GGTCATACATTCTCTGA.......................................................................................................................................................................................... 17 2 9 0.11 1 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

ATTAAAATTCCTAAGTGGTTAGGTGCGTTTCTATGAGAAAGAAATTTTCAGTATGTAAAAGACTCCGTTGTGGATGTGCTTAAAGTATTAAAGTGTTAATGTGTGTTCTAGTGTTAACTTTAGGTATGGGTTAGGCTCATGGCATTGGGTGAAGGTTGAAGAGGAAGATTTTTGGCGGAGGCAAGAGCAACAACAACGTCACTTTTGTCGGTCATCGGTTCTACACACTGCTACTCCAACGGCGTAACCA
**************************************************.((((.((........................................)).))))............************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR1275487
Male larvae		 SRR1275483
Male prepupae		 M053
female body
 M024
male body		 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR618934
dsim w501 ovaries
 SRR1275485
Male prepupae		 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
...............................................................................................................................................ATTGGGTGCAGGTTGACGA........................................................................................ 19 2 5 34.60 173 94 29 18 7 13 3 1 0 7 1 0 0 0 0
...............................................................................................................................................ATTGGGTGCAGGTTGACG......................................................................................... 18 2 13 7.15 93 36 15 18 6 5 0 5 2 3 0 0 1 2 0
................................................................................................................................................TTGGGTGCAGGTTGACGA........................................................................................ 18 2 10 4.10 41 9 3 7 8 1 1 9 0 0 0 2 1 0 0
...............................................................................................................................................ATTGGGTGCAGGTTGA........................................................................................... 16 1 3 4.00 12 11 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................ATTGGGTGAAGGTTGACGA........................................................................................ 19 1 1 3.00 3 2 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GATTGGGTGCAGGTTGA........................................................................................... 17 2 14 2.64 37 21 9 0 0 0 0 0 7 0 0 0 0 0 0
...............................................................................................................................................ATTGGGTGCAGGTTG............................................................................................ 15 1 9 2.00 18 1 0 0 0 0 9 0 3 0 0 2 1 2 0
.............................................................................................................................................GGATTGGGTGCAGGTTGACGA........................................................................................ 21 3 4 1.75 7 0 0 0 5 0 0 1 0 0 0 0 0 0 1
.....................................................................................................TGTGTTCTAGTGTTA...................................................................................................................................... 15 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................GGATTGGGTGCAGGTTGA........................................................................................... 18 2 4 0.50 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
..........................................................................................................................................................................TTTGGTGGTGGCAAGAGCAAA........................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................TTTGGTGAAGTTTGAAGATGAA.................................................................................... 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................TTTTCGGTGGTGGCAAGAGCAA............................................................ 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................ACTGCTACTGCAGCGGCGTTA... 21 3 6 0.33 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0
...............................................................................................................................................ATTGGGTGCAGGTTGATG......................................................................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................TTGGGTGCAGGTTGA........................................................................................... 15 1 12 0.25 3 0 0 0 0 0 2 0 1 0 0 0 0 0 0
............AAGTGGTTAGGTGGTTTT............................................................................................................................................................................................................................ 18 2 12 0.17 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................AGGGAGGCAAGACCAACAACA....................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................GGATTGGGTGCAGGTTGAC.......................................................................................... 19 3 20 0.15 3 0 0 0 2 0 0 1 0 0 0 0 0 0 0
.............AGTGGGCAGGTGCGATTCT.......................................................................................................................................................................................................................... 19 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................GATTGGGTGCAGGTTGATGA........................................................................................ 20 3 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GCTTTGGGTGCAGGTTGA........................................................................................... 18 2 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ATTGGGTGCAGGTTGCCGA........................................................................................ 19 3 18 0.11 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TTTTTTGGCGTAGGCTAGAG............................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................GGATTGGGTGCAGGTTGACG......................................................................................... 20 3 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AGGGTGAAGAGGAAGAATTTC............................................................................. 21 3 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................AATGTTGAAGAGGAA.................................................................................... 15 1 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................ATTTTTGGCTGAGGC.................................................................... 15 1 12 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.........CCTAAGTGGTGAGGTTC................................................................................................................................................................................................................................ 17 2 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................TGATTGGGTGAAGGTTGACG......................................................................................... 20 3 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ATTGGGTGTAGGTTG............................................................................................ 15 1 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................CAATGTTGAAGAGGAA.................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................ATTGGGTGCAGGTTTA........................................................................................... 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................CTCATTGGGTGCAGGTTG............................................................................................ 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTTTGGCGGAGGCAAAAAT.............................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:11927304-11927553 - dsi_16811 TAATTTTAAGGA--TTCACCAA-T--CC----------------------------------ACGCAAAG-A----TAC-TCTTTCTTTAAAAGTCATACA----TTTTCTGAG---GCAACACCTACACGAATTTCATAATTTCACAATTACACACA----------------AGATCACAATTGAAATCC-------ATAC-----CCA-----A-TCCG-------AG-TACCG-T-----AACCCACT---TCCAA--------CTTCTCCTTCTAAAA-ACCGCCTCCGTT---CTCGTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCCAAGATGTGTGACGATGAGGTTGCCGCATTGGT
droSec2 scaffold_0:12753282-12753531 - TAATTTTAAGGA--TTCACCAA-T--CC----------------------------------ACGCAAAG-A----TAC-TCTTTCTTTAAAAGTCATACA----TTTTCTGAG---GCAACACCTACACGAATTTCATAATTTCACAATTACACACA----------------AGATCACAATTGAAATCC-------ATAC-----CCA-----A-TCCG-------AG-TACCG-T-----AACCCACT---TCCAA--------CTTCTCCTTCTAAAA-ACCGCCTCCGTT---CTCGTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCCAAGATGTGTGACGATGAAGTTGCCGCATTGGT
dm3 chr3R:9252107-9252354 + TAATTTTAATGA--TT-----------------------GCT-----------------CCTCTGCAAAG-A----TAC-TCTTTCTTTTAAAGTCATACA----TGTTCTGAG---GCAACACCTACACGTATTTCATAATTTCACACTTACACACA----------------AGATTACAATTAAAATCC-------ATAC-----CCA-----A-TCCG-------AA-TACCGAA-----AGCCCACT---TCTCA--------CTTCTCCTTCTAAAA-ACCGCCTCCGTT---CTCGTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCCAAGATGTGTGACGATGAGGTTGCCGCATTGGT
droEre2 scaffold_4770:12389179-12389405 - TA----TAAGGA--TT-----------------------GCT-----------------GCTCTGCAAAG-A----TAC-TCTTTCTTCAAAAGTCACACA----AGTTCTGGG---ACTAGAACTACAC----------------------------GAATTTAGAACAATCTCGATCACAAGTCAAATCC-------AGTC-------------------------------CCG-A-----TACCCACA---CCCAACTCCACACCTACTCCTTCTAAAA-ACCGTCTCCGTT---CTCGTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCCAAGATGTGTGACGATGAGGTTGCCGCATTGGT
droYak3 3R:13559083-13559326 + TCATTTTAAGGA--TT-----------------------GCT-----------------GCTCTGCAAAG-A----TAC-TCTTTCTTCTAAAGTCACACA----AGTTCTGAG---GCAACAACTACAC----------------------------GAATTTAAAGCAATCTCGATCACAAGTCAAATCC-------ATTC-----CCA-----A-TCCGAGTACCTAT-ACCAA-A-----TACCCACT---CCCAA--------CTTCTCCTTCTAAA--ACCGCCTCCGTTCCCGTTCTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCCAAGATGTGTGACGATGAGGTTGCCGCATTGGT
droEug1 scf7180000409802:745076-745292 - TTCTTC---------------------------------------------------------TGAAAAGTG----TAC-TTTTTCCTATAAAGTCATACATATATGTTTTGGT---GTAACCTCAACAC----------------------------GAACACAATACAATCTCCAGTAAAAGTCAAATCC-------A--------------------CA-------AA-TACAC-A-----AATCCACA---CTTAA--------CTTCTCCTTCTAAAAGACCGCCTTCGTT---CTTCTTGT--TGTT------------------------GCAGTAAA-AACAACCAATAGCCAAAATGTGTGACGATGAGGTTGCCGCATTGGT
droBia1 scf7180000302402:1959691-1959916 + TTCACTCAATGT--TT-----------------------TCC-----------------CCTCCGAAAAA-A----TAC-TTTTTCGTATAAAGTCACACA----AGTTCTGGT---CTCACA--AACAC----------------------------CATTA-----CAAT--AGAGCACAAGTCAAAACC-------AGCC-----CCA-----ACTCCA-------AA-TCCCG-A-----AACCCAGT---CCCAA--------CTTCTCCTTCTAAC--ACCGCCTCCGTT---CTTGTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCCAAGATGTGTGACGATGAGGTAGCCGCATTGGT
droTak1 scf7180000415380:15811-16080 + TTATTTTAAAGAAAT--ATTC-----------AGTGCTATATTTCATTTAGGGACTATCTTTTTTAAAAT-ATACCTAC-TTTTTCGAGTAAAGTCACACA----AGATTTAAT---GTAACATCAACAC----------------------------GAATACACAGCAAT--AGAGCACCAGTCAAAACC-------AGCC-----CCA-----T-TCCA-------AA-ACCCG-A-----AACCCAGTCCTCCCAA--------CTTCTCCTTCTAAAAGACCGCCTTCGTT---CTCGTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCGAAGATGTGTGACGATGAGGTTGCCGCATTGGT
droEle1 scf7180000491047:1953333-1953473 - CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCC-------AGCCCAAACCCA-----A-C-----ACCCAAC-ACCCG-A-----GACCCAGT---CCCAA--------CTTCTCCTTCTAAAATACCGCTTCCGTT---GTTGCTGT--TGTT------------------------GCAGTGAA-AATATATATTAGCCAAGATGTGTGACGATGAGGTTGCCGCTCTGGT
droRho1 scf7180000771951:23304-23532 - TGGGTTTAATTA--TCCAAGAG-T--GT------------GT-----------------CCAATGTA-AG-A---TTCC-TTTTTCAAATAAAGTCACACC----ATTTCC--------------AAACC----------------------------GAACATATAGCAAT--CGAGTAGAAGTCAAATCC-------AGCC-----TCA-----G-TTCA-------AAAACCCG-A-----AACCCAGT---CCCAA--------CTTCTCCTTCTAAAATATCGCCCCCGTT------GTTGT--TGTT------------------------GCAGTGAA-AACATATATTAGCCAAGATGTGTGACGATGAGGTTGCCGCTCTGGT
droFic1 scf7180000453906:250589-250821 - TTGTTTTGAAAAA-TT-----------------------TTT-----------------TTTCTGAAAAG-G----CACTTTTTTCGTATAAAGTCACATA----TCATTTTCT---GTAACACTGACAC----------------------------AAGTACAAATCAAT--TGAGTAGAAGGCAAATCC-------AGCC-----------------GA-------AA-CCCCG-C-----CACCCATT---CCCAT--------CTTCTCCTTCTAAAGGACCGCTTCCGTTCTCGTTGTTGT--TGTT------------------------GCAGTAAA-AACAGACAGTAGCCAAAATGTGTGACGATGAGGTTGCCGCATTGGT
droKik1 scf7180000302392:569585-569738 - ACAC--------------------------------------------------------------------------------------------ACACA----ATTTC-----------------------------------------------------------------------CATTGA--TCCATCGCTCATAC-----ACA-----A-ACTG-------C--------ACGCACAGCACATC---TTATA--------CTTTTCATTCTAAAATATCCTGTCC------CTTGCGGT--ATTT------------------------GCAGTTAACAACAGCCAAAAGCCAAGATGTGTGACGACGAGGTTGCCGCATTGGT
droAna3 scaffold_13340:1810706-1810926 + AAG-------GA--T--ATTAA-ACTGCGACAAGTGTTAGAT-----------------TTTTTCAAAAG-C----TAC-TTTTTCGAATAAAGTCAAATA----AATTGTGTAGATGT------GACAC----------------------------GAATACACGGCACC--CTAGTAGAAAC-----------------------ATAAAGTAG-------ACATAAA-ACATA-A-----GACTAAGT---CCTTG--------CTTCT----------------TTCTGTT---GTTGTTGT----TT------------------------GCAGTAAA-AACAGCCAGTAGCCAAGATGTGTGACGACGAGGTTGCCGCATTGGT
droBip1 scf7180000396712:2522766-2522978 - TAATACTGA-----T--ATTAATACTG---AAAGTGTTAGAT-----------------TTTTTCAAAAG-A----TAC-TTTTTCGAATAAAGTCAAAAA----AATTTAGTT---GTGACA------C----------------------------GGATACACGGCACC--CAAGTAGAAAC-----------------------ATCACCT--------------AG-ACATT-A-----AACTAAGT---CCTTT--------CTTCT----------------CTCTGTT---GTTGTTGT----TT------------------------GCAGTAAA-AACAGCCAGTAGCCAAGATGTGTGACGACGAGGTTGCCGCATTGGT
dp5 2:16698818-16698966 + TCAA---------------------------------------------------------------------------------------------------------------------------AAT----------------------------TAAGACACAGAGAT------C--------------------AGAA-----AAC----------------------ACTG-A-----AATTCACG---AACA-------------------TCAAA-ATTGTAT---CT---TCTCCTGC--CGGTTATTAACGGACTGCTCTATCTTTTACAGTA-A-AACAAATACTATACAAGATGTGTGACGATGAGGTTGCCGCATTGGT
droPer2 scaffold_0:3697263-3697317 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------ACAGTA-A-AACAAATACTATACAAGATGTGTGACGATGAGGTTGCCGCATTGGT
droWil2 scf2_1100000004902:1572030-1572135 - CCGTTTCC----------------------------------------------------------AAAG-G----GTT-TTCATTTTTTAAAGTCAAA-------GTTCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---TT---TTTGTTTT--TGGTT-----------------------CCAG------ATAAACAACTGCCAAGATGTGTGACGATGATGCGGGTGCATTAGT
droVir3 scaffold_12823:1822508-1822568 - T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG--TACC------------------------GTAATACA-AACAAACCCCAGACAAAATGTGTGACGATGAGGTTGCTGCTTTGGT
droMoj3 scaffold_6540:10306971-10307061 + TTCAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCT-------A-ATCGTACGCATT---CTGCTCTC--CCCT------------------------GCAGTAAG-ACAGATTAATCGCCAGGATGTGTGATGATGAAGTTGCCGCATTGGT
droGri2 scaffold_14906:3766676-3766748 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTT---ATTGCTGTCTTATT------------------------GCAGTTAACACAGACCAGACGCCAAGATGTGTGATGATGAAGTTGCCGCATTGGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TAATTTTAAGGA--TTCACCAA-T--CC----------------------------------ACGCAAAG-A----TAC-TCTTTCTTTAAAAGTCATACA----TTTTCTGAG---GCAACACCTACACGAATTTCATAATTTCACAATTACACACA----------------AGATCACAATTGAAATCC-------ATAC-----CCA-----A-TCCG-------AG-TACCG-T-----AACCCACT---TCCAA--------CTTCTCCTTCTAAAA-ACCGCCTCCGTT---CTCGTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCCAAGATGTGTGACGATGAGGTTGCCGCATTGGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................GTT---CTCGTTGT--TGTT------------------------GCAG...................................................1917.00700700000000000000
..................................................................................................................................................................................................................................................................................................TCCGTT---CTCGTTGT--TGTT------------------------GCAG...................................................2215.00500401000000000000
....................................................................................................................................................................................................................................................................................................................................................................................GATGAGGTTGCCGCATTG..1815.00500500000000000000
...........................................................................................................................................................................................................................................................................................................................................................ACAGCCAGTAGCCAAGATGTGTGAC....................2512.00200200000000000000
.................................................................................................................................................................................................................................................................................................................................................................AGTAGCCAAGATGTGTGACG...................2011.00100000000000100000
..........................................................................................................................................................................................................................................................................................................................................................AACAGCCAGTAGCCAAGATGTGTGA.....................2511.00100000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................GATGTGTGACGATGAGGT............1811.00100000100000000000
...................................................................................................................................................................................................................................................................................................CCGTT---CTCGTTGT--TGTT------------------------GCAG...................................................2111.00100100000000000000
...........................................................................................................................................................................................................................CCG-------AG-TACCG-T-----AACCCACT---TCCAA--------............................................................................................................................2411.00100000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................CGATGAGGTTGCCGCATTG..1911.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATGTGTGACGATGAGGTTGCCGCATTG..2711.00100000000000100000
..........................................................................................................................................................................................................................................................................................................................................................AACAGCCAGTAGCCAAGATGTGTGAC....................2611.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................AAGATGTGTGACGATGAGGTTGCCGCA.....2711.00100000000000100000
droSec2
TAATTTTAAGGA--TTCACCAA-T--CC----------------------------------ACGCAAAG-A----TAC-TCTTTCTTTAAAAGTCATACA----TTTTCTGAG---GCAACACCTACACGAATTTCATAATTTCACAATTACACACA----------------AGATCACAATTGAAATCC-------ATAC-----CCA-----A-TCCG-------AG-TACCG-T-----AACCCACT---TCCAA--------CTTCTCCTTCTAAAA-ACCGCCTCCGTT---CTCGTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCCAAGATGTGTGACGATGAAGTTGCCGCATTGGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................TGTGTGACGATGAAGTTGC.........1922.0040040
......................................................................................................................................................................................................................................................................................................................................................GAA-AACAGCCAGTAGCCAAGAT...........................2211.0010010
....................................................................................................................................................................................................................................................................................................................................................................................GATGAAGTTGCCGCATTGGT2011.0010010
..........................................................................................................................................................................................................................................................................................................................................................AACAGCCAGTAGCCAAGATGTGTGAC....................2611.0010010
..........................................................................................................................................................................................................................................................................................................................................................AACAGCCAGTAGCCAAGATGTGTG......................2411.0010010
......................................................................................................................................................................................................................................................................................................................................................GAA-AACAGCCAGTAGCCAAGATGTGT.......................2611.0010010
..................................................................................................................................................................................................................................................................................................................................................................GTAGCCAAGATGTGTGACG...................1911.0010100
........................................................................................................................................................................................................................................................................................................................................................A-AACAGCCAGTAGCCAAGATGT.........................2211.0010010
.............................................................................................................................................................................................................................................................................................................................................................AGCCAGTAGCCAAGATGTGT.......................2011.0010100
.....................................................................................................................................................................................................................................................................................................................................................................GCCAAGATGTGTGACGATG................1920.5010100
dm3
TAATTTTAATGA--TT-----------------------GCT-----------------CCTCTGCAAAG-A----TAC-TCTTTCTTTTAAAGTCATACA----TGTTCTGAG---GCAACACCTACACGTATTTCATAATTTCACACTTACACACA----------------AGATTACAATTAAAATCC-------ATAC-----CCA-----A-TCCG-------AA-TACCGAA-----AGCCCACT---TCTCA--------CTTCTCCTTCTAAAA-ACCGCCTCCGTT---CTCGTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCCAAGATGTGTGACGATGAGGTTGCCGCATTGGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................AGCCAGTAGCCAAGATGTGTGAC....................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TT---CTCGTTGT--TGTT------------------------GCAG...................................................1823.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GTAGCCAAGATGTGTGAC....................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GTT---CTCGTTGT--TGTT------------------------GCAG...................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CAAGATGTGTGACGATGA...............1822.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000100200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AAGATGTGTGACGATGAGGT............2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TCCGTT---CTCGTTGT--TGTT------------------------GCAG...................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................CTCCGTT---CTCGTTGT--TGTT------------------------GCAG...................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GCCAGTAGCCAAGATGTGT.......................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000
....................................................................................................................................................................................................................................................................................................................................................................AGCCAAGATGTGTGACGAT.................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GTGTGACGATGAGGTTGC.........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................TCCGTT---CTCGTTGT--TGTT------------------------GCA....................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GCCAAGATGTGTGACGATGA...............2021.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................AGCCAGTAGCCAAGATGTGT.......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AAGATGTGTGACGATGAGGTT...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AGATGTGTGACGATGAGGTTGCC........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AAGATGTGTGACGATGAGGTTGCC........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AAGATGTGTGACGATGAG..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TCCGTT---CTCGTTGT--TGTT------------------------GCAT...................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GTGACGATGAGGTTGCCGCATTGGT2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................ACAGCCAGTAGCCAAGATGTGTGA.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AGTAGCCAAGATGTGTGACGATGAGGT............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................CCTCCGTT---CTCGTTGT--TGTT------------------------GCAG...................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................CTCCGTT---CTCGTTGT--TGTT------------------------G......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CAAGATGTGTGACGATGAGGT............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATGTGTGACGATGAGGTTGCC........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GTGTGACGATGAGGTTGCCGCATT...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................ACCGCCTCCGTT---CTCGTTGT--TGTT------------------------G......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CGATGAGGTTGCCGCATTGGT2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GACGATGAGGTTGCCGCA.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AGATGTGTGACGATGAGG.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................A-TCCG-------AA-TACCGAA-----AGCC................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AGATGTGTGACGATGAGGT............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CGATGAGGTTGCCGCATTG..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AGATGTGTGACGATGAGGTT...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GACGATGAGGTTGCCGCATT...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TGTGTGACGATGAGGTTGC.........1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AGTAGCCAAGATGTGTGACG...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AGATGTGTGACGATGAGGTTGC.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CCAGTAGCCAAGATGTGTGAC....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TGTGTGACGATGAGGTTGCC........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................CAGTAGCCAAGATGTGTGAC....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GTGTGACGATGAGGTTGCCGC......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATGTGTGACGATGAGGTT...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AACAGCCAGTAGCCAAGATGTGTGAC....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GTT------------------------GCAGTGAA-AACAGCCAG.....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GCCAAGATGTGTGACGATGAG..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AGTAGCCAAGATGTGTGACGAT.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GATGTGTGACGATGAGGTT...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GAA-AACAGCCAGTAGCCAA..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GTAGCCAAGATGTGTGACGATGA...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................ACCGCCTCCGTT---CTCGTTGT--TGTT------------------------GCAG...................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AACAGCCAGTAGCCAAGC............................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AACAGCCAGTAGCCAAGAT...........................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GCCAAGATGTGTGACGATG................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GCCAAGATGTGTGACGAT.................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TGT--TGTT------------------------GCAGTGAA-AAA...........................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GT--TGTT------------------------GCAGTGAA-AAAG..........................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TGAA-AACAGCCAGTAGTTT...............................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TA----TAAGGA--TT-----------------------GCT-----------------GCTCTGCAAAG-A----TAC-TCTTTCTTCAAAAGTCACACA----AGTTCTGGG---ACTAGAACTACAC----------------------------GAATTTAGAACAATCTCGATCACAAGTCAAATCC-------AGTC-------------------------------CCG-A-----TACCCACA---CCCAACTCCACACCTACTCCTTCTAAAA-ACCGTCTCCGTT---CTCGTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCCAAGATGTGTGACGATGAGGTTGCCGCATTGGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................AACAGCCAGTAGCCAAGATGTGTGA.....................2511.0010000010
.....................................................................................................................................................................................................................................................................................................................................................TGAA-AACAGCCAGTAGCCAAGA............................2211.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................GACGATGAGGTTGCCGCATTGGT2311.0010000010
........................................................................................................................................................................................................................................................................................................................................................A-AACAGCCAGTAGCCAAGATG..........................2111.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................GATGTGTGACGATGAGGTTGCCGCA.....2511.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................GTGTGACGATGAGGTTGCC........1911.0010000100
...................................................................................................................................................................................................................................................................................................................................................................TAGCCAAGATGTGTGACGATGA...............2211.0010001000
..............................................................................................................................................................................................................................................................................................................................................................GCCAGTAGCCAAGATGTGT.......................1911.0010001000
..........................................................................................................................................................................................................................................................................................................................................................................GATGTGTGACGATGAGGT............1811.0010000010
................................................................................................................................................................................................................................................................................................................................................................CAGTAGCCAAGATGTGTGA.....................1911.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................CAAGATGTGTGACGATGA...............1820.5010000010
droYak3
TCATTTTAAGGA--TT-----------------------GCT-----------------GCTCTGCAAAG-A----TAC-TCTTTCTTCTAAAGTCACACA----AGTTCTGAG---GCAACAACTACAC----------------------------GAATTTAAAGCAATCTCGATCACAAGTCAAATCC-------ATTC-----CCA-----A-TCCGAGTACCTAT-ACCAA-A-----TACCCACT---CCCAA--------CTTCTCCTTCTAAA--ACCGCCTCCGTTCCCGTTCTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCCAAGATGTGTGACGATGAGGTTGCCGCATTGGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................GAA-AACAGCCAGTAGCCAAGATGTGT.......................2611.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................AGCCAAGATGTGTGACGATGAGGT............2411.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................CAAGATGTGTGACGATGAGGT............2111.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................GTGACGATGAGGTTGCCGCATTGGT2511.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................CCAGTAGCCAAGATGTGTGAC....................2111.00100000010000
......................................................................................................................................................................................................................................................................................................................................................GAA-AACAGCCAGTAGCCAAGATGT.........................2411.00100000010000
droEug1
TTCTTC---------------------------------------------------------TGAAAAGTG----TAC-TTTTTCCTATAAAGTCATACATATATGTTTTGGT---GTAACCTCAACAC----------------------------GAACACAATACAATCTCCAGTAAAAGTCAAATCC-------A--------------------CA-------AA-TACAC-A-----AATCCACA---CTTAA--------CTTCTCCTTCTAAAAGACCGCCTTCGTT---CTTCTTGT--TGTT------------------------GCAGTAAA-AACAACCAATAGCCAAAATGTGTGACGATGAGGTTGCCGCATTGGTSizeHit CountTotal NormTotal
No Reads
droBia1
TTCACTCAATGT--TT-----------------------TCC-----------------CCTCCGAAAAA-A----TAC-TTTTTCGTATAAAGTCACACA----AGTTCTGGT---CTCACA--AACAC----------------------------CATTA-----CAAT--AGAGCACAAGTCAAAACC-------AGCC-----CCA-----ACTCCA-------AA-TCCCG-A-----AACCCAGT---CCCAA--------CTTCTCCTTCTAAC--ACCGCCTCCGTT---CTTGTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCCAAGATGTGTGACGATGAGGTAGCCGCATTGGTSizeHit CountTotal NormTotal
No Reads
droTak1
TTATTTTAAAGAAAT--ATTC-----------AGTGCTATATTTCATTTAGGGACTATCTTTTTTAAAAT-ATACCTAC-TTTTTCGAGTAAAGTCACACA----AGATTTAAT---GTAACATCAACAC----------------------------GAATACACAGCAAT--AGAGCACCAGTCAAAACC-------AGCC-----CCA-----T-TCCA-------AA-ACCCG-A-----AACCCAGTCCTCCCAA--------CTTCTCCTTCTAAAAGACCGCCTTCGTT---CTCGTTGT--TGTT------------------------GCAGTGAA-AACAGCCAGTAGCGAAGATGTGTGACGATGAGGTTGCCGCATTGGTSizeHit CountTotal NormTotal
No Reads
droEle1
CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCC-------AGCCCAAACCCA-----A-C-----ACCCAAC-ACCCG-A-----GACCCAGT---CCCAA--------CTTCTCCTTCTAAAATACCGCTTCCGTT---GTTGCTGT--TGTT------------------------GCAGTGAA-AATATATATTAGCCAAGATGTGTGACGATGAGGTTGCCGCTCTGGTSizeHit CountTotal NormTotal
No Reads
droRho1
TGGGTTTAATTA--TCCAAGAG-T--GT------------GT-----------------CCAATGTA-AG-A---TTCC-TTTTTCAAATAAAGTCACACC----ATTTCC--------------AAACC----------------------------GAACATATAGCAAT--CGAGTAGAAGTCAAATCC-------AGCC-----TCA-----G-TTCA-------AAAACCCG-A-----AACCCAGT---CCCAA--------CTTCTCCTTCTAAAATATCGCCCCCGTT------GTTGT--TGTT------------------------GCAGTGAA-AACATATATTAGCCAAGATGTGTGACGATGAGGTTGCCGCTCTGGTSizeHit CountTotal NormTotal
No Reads
droFic1
TTGTTTTGAAAAA-TT-----------------------TTT-----------------TTTCTGAAAAG-G----CACTTTTTTCGTATAAAGTCACATA----TCATTTTCT---GTAACACTGACAC----------------------------AAGTACAAATCAAT--TGAGTAGAAGGCAAATCC-------AGCC-----------------GA-------AA-CCCCG-C-----CACCCATT---CCCAT--------CTTCTCCTTCTAAAGGACCGCTTCCGTTCTCGTTGTTGT--TGTT------------------------GCAGTAAA-AACAGACAGTAGCCAAAATGTGTGACGATGAGGTTGCCGCATTGGTSizeHit CountTotal NormTotal
No Reads
droKik1
ACAC--------------------------------------------------------------------------------------------ACACA----ATTTC-----------------------------------------------------------------------CATTGA--TCCATCGCTCATAC-----ACA-----A-ACTG-------C--------ACGCACAGCACATC---TTATA--------CTTTTCATTCTAAAATATCCTGTCC------CTTGCGGT--ATTT------------------------GCAGTTAACAACAGCCAAAAGCCAAGATGTGTGACGACGAGGTTGCCGCATTGGTSizeHit CountTotal NormTotal
No Reads
droAna3
AAG-------GA--T--ATTAA-ACTGCGACAAGTGTTAGAT-----------------TTTTTCAAAAG-C----TAC-TTTTTCGAATAAAGTCAAATA----AATTGTGTAGATGT------GACAC----------------------------GAATACACGGCACC--CTAGTAGAAAC-----------------------ATAAAGTAG-------ACATAAA-ACATA-A-----GACTAAGT---CCTTG--------CTTCT----------------TTCTGTT---GTTGTTGT----TT------------------------GCAGTAAA-AACAGCCAGTAGCCAAGATGTGTGACGACGAGGTTGCCGCATTGGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................GTGACGACGAGGTTGCCGCATTGGT2511.001010000
.......................................................................................................................................................................................................................................................................................................................................................................CAAGATGTGTGACGACGAGGTTGCCGC......2711.001010000
..................................................................................................................................................................................................................................................................................................................................................................................ACGACGAGGTTGCCGCAT....1811.001010000
.............................................................................................................................................................................................................................................................................................................................................................AGCCAGTAGCCAAGATGTGTGAC....................2311.001010000
..................................................................................................................................................................................................................................................................................................................................................................GTAGCCAAGATGTGTGACGA..................2011.001010000
..........................................................................................................................................................................................................................................................................................................................................................AACAGCCAGTAGCCAAGATG..........................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................CAGCCAGTAGCCAAGATGTGTGAC....................2411.001010000
...............................................................................................................................................................................................................................................................................................................................................................................GTGACGACGAGGTTGCCGC......1911.001010000
...........................................................................................................................................................................................................................................................................................................................................................ACAGCCAGTAGCCAAGATGTGT.......................2211.001000001
........................................................................................................................................................................................................................................................................................................................................................A-AACAGCCAGTAGCCAAGATGTGTGAC....................2711.001010000
........................................................................................................................................................................................................................................................................................................................................................................AAGATGTGTGACGACGAGGTT...........2111.001010000
droBip1
TAATACTGA-----T--ATTAATACTG---AAAGTGTTAGAT-----------------TTTTTCAAAAG-A----TAC-TTTTTCGAATAAAGTCAAAAA----AATTTAGTT---GTGACA------C----------------------------GGATACACGGCACC--CAAGTAGAAAC-----------------------ATCACCT--------------AG-ACATT-A-----AACTAAGT---CCTTT--------CTTCT----------------CTCTGTT---GTTGTTGT----TT------------------------GCAGTAAA-AACAGCCAGTAGCCAAGATGTGTGACGACGAGGTTGCCGCATTGGTSizeHit CountTotal NormTotal
No Reads
dp5
TCAA---------------------------------------------------------------------------------------------------------------------------AAT----------------------------TAAGACACAGAGAT------C--------------------AGAA-----AAC----------------------ACTG-A-----AATTCACG---AACA-------------------TCAAA-ATTGTAT---CT---TCTCCTGC--CGGTTATTAACGGACTGCTCTATCTTTTACAGTA-A-AACAAATACTATACAAGATGTGTGACGATGAGGTTGCCGCATTGGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................GTGTGACGATGAGGTTGCCGCATT...2411.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................AAGATGTGTGACGATGAG..............1811.0010100000000
...............................................................................................................................................................................................................................................................................................................................CGGACTGCTCTATCTTTT.......................................................1811.0010000100000
............................................................................................................................................................................................................................................................................................................................................................................TGTGTGACGATGAGGTTGCCGCATTG..2611.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................GATGTGTGACGATGAGGTTG..........2011.0010000010000
.............................................................................................................................................................................................................................................................................................................................................................................GTGTGACGATGAGGTTGC.........1821.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................ATGTGTGACGATGAGGTTGC.........2020.5010100000000
droPer2
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------ACAGTA-A-AACAAATACTATACAAGATGTGTGACGATGAGGTTGCCGCATTGGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................AGATGTGTGACGATGAGGT............1911.001001000
.............................................................................................................................................................................................................................................................................................................................................................................GTGTGACGATGAGGTTGC.........1820.501010000
droWil2
CCGTTTCC----------------------------------------------------------AAAG-G----GTT-TTCATTTTTTAAAGTCAAA-------GTTCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---TT---TTTGTTTT--TGGTT-----------------------CCAG------ATAAACAACTGCCAAGATGTGTGACGATGATGCGGGTGCATTAGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................AGATGTGTGACGATGATGCGGGTGCA.....2615.00541000
..................................................................................................................................................................................................................................................................................................................................................................ACTGCCAAGATGTGTGAC....................1814.00431000
............................................................................................................................................................................................................................................................................................................................................................................TGTGTGACGATGATGCGGGTGCA.....2313.00300003
........................................................................................................................................................................................................................................................................................................................................................................AAGATGTGTGACGATGATGCGGGTGCA.....2712.00220000
................................................................................................................................................................................................................................................................................................................................................................CAACTGCCAAGATGTGTGAC....................2012.00220000
.....................................................................................................................................................................................................................................................................................................................................................................GCCAAGATGTGTGACGATGAT..............2112.00200002
..........................................................................................................................................................................................................................................................................................................................................................................GATGTGTGACGATGATGCGGGTGCA.....2512.00200200
...............................................................................................................................................................................................................................................................................................................................................................ACAACTGCCAAGATGTGTGACGATGAT..............2712.00220000
...........................................................................................................................................................................................................................................................................................................................................................................ATGTGTGACGATGATGCGGGTGCAT....2512.00220000
...........................................................................................................................................................................................................................................................................................................................................................................ATGTGTGACGATGATGCGGGTGCA.....2412.00210001
...........................................................................................................................................................................................................................................................................................................................................................ATAAACAACTGCCAAGATGTGTGACGAT.................2811.00100100
...........................................................................................................................................................................................................................................................................................................................................................................ATGTGTGACGATGATGCGGGT........2111.00100100
....................................................................................................................................................................................................................................................................................................................................................G------ATAAACAACTGCCAAGATGTGTGAC....................2611.00110000
....................................................................................................................................................................................................................................................................................................................................................................TGCCAAGATGTGTGACGATG................2011.00110000
..............................................................................................................................................................................................................................................................................................................................................................................TGTGACGATGATGCGGGTGCATT...2311.00100001
........................................................................................................................................................................................................................................................................................................................................................................AAGATGTGTGACGATGATGCGGGT........2411.00100100
.........................................................................................................................................................................................................................................................................................................................................................................AGATGTGTGACGATGATGCGGGTGCATT...2811.00110000
.......................................................................................................................................................................................................................................................................................................................................................................CAAGATGTGTGACGATGATGCGGGTG.......2611.00100100
.........................................................................................................................................................................................................................................................................................................................................................................AGATGTGTGACGATGATGCGGGTGCATTA..2911.00110000
....................................................................................................................................................................................................................................................................................................................................................................TGCCAAGATGTGTGACGATGATGCGGG.........2711.00100100
..........................................................................................................................................................................................................................................................................................................................................................................GATGTGTGACGATGATGCGGGTGCATT...2711.00101000
....................................................................................................................................................................................................................................................................................................................................................G------ATAAACAACTGCCAAGATGTGT.......................2311.00101000
..............................................................................................................................................................................................................................................................................................................................................................................TGTGACGATGATGCGGGTGCAT....2211.00101000
...................................................................................................................................................................................................................................................................................................................................................................CTGCCAAGATGTGTGACGATGATGCGGG.........2811.00100100
.................................................................................................................................................................................................................................................................................................................................................................AACTGCCAAGATGTGTGACGATGATGCGG..........2911.00100100
..........................................................................................................................................................................................................................................................................................................................................................................GATGTGTGACGATGATGC............1811.00100001
..........................................................................................................................................................................................................................................................................................................................................................................GATGTGTGACGATGATGCGGGT........2211.00100001
....................................................................................................................................................................................................................................................................................................................................................G------ATAAACAACTGCCAAGATGT.........................2111.00100100
.................................................................................................................................................................................................................................................................................................................................................................................GACGATGATGCGGGTGCAT....1911.00100001
droVir3
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG--TACC------------------------GTAATACA-AACAAACCCCAGACAAAATGTGTGACGATGAGGTTGCTGCTTTGGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................GTGTGACGATGAGGTTGCTGCTTT...2417.007000100000000000000000000000000000000000000000000000000000000114
..........................................................................................................................................................................................................................................................................................................................................................................AATGTGTGACGATGAGGTTGCT........2215.005001000000000000101000000000000000000000000000000000000000001100
............................................................................................................................................................................................................................................................................................................................................................................TGTGTGACGATGAGGTTGC.........1914.004001100000100000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GTGACGATGAGGTTGCTGCT.....2014.004000100000000000000000000000000000000000000000000000000000002010
.......................................................................................................................................................................................................................................................................................................................................................................CAAAATGTGTGACGATGAGGTTGC.........2414.004000200000100000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................CGATGAGGTTGCTGCTTTGGT2113.003000000000000000000000000000000000000000000000000000000000002001
.............................................................................................................................................................................................................................................................................................................................................................AAACCCCAGACAAAATGTGTGAC....................2313.003001200000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATGTGTGACGATGAGGT............1913.003000000002000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................AGACAAAATGTGTGACGAT.................1913.003000000000000002001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TGTGTGACGATGAGGTTGCT........2013.003000000000000000000010000000000000000000000000000000000000000200
........................................................................................................................................................................................................................................................................................................................................................................AAAATGTGTGACGATGAGGTTGCTGCT.....2712.002000000000000001000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AATGTGTGACGATGAGGTTGC.........2112.002000100000100000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GTGTGACGATGAGGTTGCTGCTT....2312.002000100000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................AAACCCCAGACAAAATGTGTGACGAT.................2612.002000000000000000101000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CCAGACAAAATGTGTGACGATGAGGT............2612.002001100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GACGATGAGGTTGCTGCTTTGGT2312.002001000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATGTGTGACGATGAGGTTGC.........2212.002000100000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................AAATGTGTGACGATGAGGTTGCTGCT.....2612.002001000000000000000000000000000000000000000000000000000000000100
....................................................................................................................................................................................................................................................................................................................................................................AGACAAAATGTGTGACGATGAGGT............2412.002001000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TGTGTGACGATGAGGTTGCTGC......2212.002000000000000000000000000000000000000010000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................TGTGACGATGAGGTTGCTG.......1912.002000000000000000000000000000000000200000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................CAAACCCCAGACAAAATGTGTGAC....................2412.002000100000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GACAAAATGTGTGACGATGAGGT............2312.002000100000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................GACAAAATGTGTGACGATGAGGTT...........2412.002000000000000000100000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................CA-AACAAACCCCAGACAAAATGTGTGAC....................2812.002000200000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GACAAAATGTGTGACGATGAG..............2112.002000000000000000000000000000010000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................GACGATGAGGTTGCTGCTTT...2012.002000100000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATGTGTGACGATGAGGTTGCT........2312.002000000000000000000000000000000000000000000000000000000000001100
.....................................................................................................................................................................................................................................................................................................................................................................GACAAAATGTGTGACGATGAGGTTGC.........2612.002000100000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................ATGAGGTTGCTGCTTTGGT1912.002000000001000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................TGAGGTTGCTGCTTTGGT1812.002000000001100000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GTGTGACGATGAGGTTGC.........1812.002000000000000000100000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GACGATGAGGTTGCTGCT.....1812.002000000000000000000000000000000000000000000000000000000000002000
........................................................................................................................................................................................................................................................................................................................................................................AAAATGTGTGACGATGAGGT............2012.002000000000000000000000000000000000000000000000000000000000002000
...............................................................................................................................................................................................................................................................................................................................................................................GTGACGATGAGGTTGCTGCTTTGGT2512.002000200000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TGTGTGACGATGAGGTTGCTGCT.....2312.002001000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................................AACCCCAGACAAAATGTGTGACGAT.................2512.002000000000000000000000100000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................GATGAGGTTGCTGCTTTGGT2012.002000000000000000000000000000000000000000000000000000000000002000
.........................................................................................................................................................................................................................................................................................................................................................................AAATGTGTGACGATGAGGTTGCTG.......2411.001000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATGTGTGACGATGAGG.............1811.001000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................AAAATGTGTGACGATGAGGTT...........2111.001000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................GACGATGAGGTTGCTGCTTC...2011.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATGTGTGACGATGAGGTTGCTGCT.....2411.001010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TGTGACGATGAGGTTGCTGCT.....2111.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................GTGTGACGATGAGGTTGCT........1911.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................TGTGACGATGAGGTTGCT........1811.001000000000000000000000000000000000000000000000000000000000000100
............................................................................................................................................................................................................................................................................................................................................................CAAACCCCAGACAAAATGTGT.......................2111.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................CA-AACAAACCCCAGACAAAATGTGT.......................2511.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GTGACGATGAGGTTGCTGCTTT...2211.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GACAAAATGTGTGACGATGA...............2011.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TGACGATGAGGTTGCTGCT.....1911.001000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................................................................................................................................................................................................................................................AATGTGTGACGATGAGGT............1811.001000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................GACAAAATGTGTGACGATG................1911.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................C------------------------GTAATACA-AACAAACCCCA...................................2011.001000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AAAATGTGTGACGATGAGG.............1911.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................TGTGTGACGATGAGGTTGCTGCTTT...2511.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................ATACA-AACAAACCCCAGACAAAATGTGT.......................2811.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................ACCCCAGACAAAATGTGTGACG...................2211.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CAGACAAAATGTGTGACGAT.................2011.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAATGTGTGACGATGAGGTT...........2011.001000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATGTGTGACGATGAGGTTGCT........2111.001000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................AAAATGTGTGACGATGAG..............1811.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AGACAAAATGTGTGACGATGAGGTTGC.........2711.001000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................GTGACGATGAGGTTGCTGCTTC...2211.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TACC------------------------GTAATACA-AACAAACCCCAGA.................................2511.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AACAAACCCCAGACAAAATG..........................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ACAAAATGTGTGACGATGA...............1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CGATGAGGTTGCTGCTTTG..1911.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ACAAAATGTGTGACGATGAGGT............2211.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................AATGTGTGACGATGAGGTTGCTGCT.....2511.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................GATGAGGTTGCTGCTTTGGC2011.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................ACAAACCCCAGACAAAATGTGTGACGAC.................2811.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................CAAACCCCAGACAAAATGTGTGACGAT.................2711.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GACGATGAGGTTGCTGCTT....1911.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TGTGTGACGATGAGGT............1611.001000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................................................................................................................................................................................................................AACCCCAGACAAAATGTGTGACGATGA...............2711.001000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................GACAAAATGTGTGACGATGAGG.............2211.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AATGTGTGACGATGAGGTTG..........2011.001000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................GTGACGATGAGGTTGCTGC......1911.001000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................GTGTGACGATGAGGTTGCTG.......2011.001000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GG--TACC------------------------GTAATACA-AACAAACCCCAGA.................................2711.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................A-AACAAACCCCAGACAAAATGTGC.......................2411.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GG--TACC------------------------GTAATACA-AACAAACC......................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CAAAATGTGTGACGATGAGGT............2111.001000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................GACGATGAGGTTGCTGCTTTG..2111.001000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................C------------------------GTAATACA-AACAAACCCCAGACAAAATGTGTGACGATGAGGTTGCTG.......4811.001000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................AAATGTGTGACGATGAGGTTGCC........2320.501000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATGTGTGACGATGAGGTTGCC........2120.501000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGAGGTTGCTGCTTTGGG1820.501100000000000000000000000000000000000000000000000000000000000000
droMoj3
TTCAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATCT-------A-ATCGTACGCATT---CTGCTCTC--CCCT------------------------GCAGTAAG-ACAGATTAATCGCCAGGATGTGTGATGATGAAGTTGCCGCATTGGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................G-ACAGATTAATCGCCAGGATGTGTGAT....................2712.002100001
............................................................................................................................................................................................................................................................................................................................................................AGATTAATCGCCAGGATGTGTGATGAT.................2711.001100000
............................................................................................................................................................................................................................................................................................................................................................AGATTAATCGCCAGGATGTGTGATG...................2511.001100000
.............................................................................................................................................................................................................................................................................................................................................................GATTAATCGCCAGGATGTGTGAT....................2311.001100000
....................................................................................................................................................................................................................................................................................................................................................................CGCCAGGATGTGTGATGATGAA..............2211.001100000
..............................................................................................................................................................................................................................................................................................................................................................ATTAATCGCCAGGATGTGTGAT....................2211.001100000
.............................................................................................................................................................................................................................................................................................................................................................GATTAATCGCCAGGATGTGTG......................2111.001100000
droGri2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTT---ATTGCTGTCTTATT------------------------GCAGTTAACACAGACCAGACGCCAAGATGTGTGATGATGAAGTTGCCGCATTGGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................................................................................................ACCAGACGCCAAGATGTGTGATG...................2311.00101

Generated: 05/18/2015 at 01:10 PM