ID:dsi_16803 |
Coordinate:3l:7905634-7905783 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -5.5 | -5.3 | -5.1 |
 |
 |
 |
CDS [3l_7905784_7907709_+]; exon [3l_7905784_7907709_+]; intron [3l_7902464_7905783_+]
No Repeatable elements found
| --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## GTATAACTTGTGTATGACAGTTTGAAAACTGTTATACCGGCAGTTTTTAATGTCCCAATTCAATTGATTGTTTCCCCCAGACCCCTGATGAGTGTACATATCTGTTGTTATTGCATTATAAAATCGAATGATTTATACTTTATGCATCCTTACTAATTGCTTCATCCTTTTCCCACTCAACGCCTCACCACAATATCCAGGAAGCCCTCTCACTCCGCACCGGCGACATCACACAGCAGGCGAGCAACAA ************************************************************((((.(((((((((...(((....)))..)))...))).))).)))).....................************************************************************************************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
M023 head |
M053 female body |
O001 Testis |
GSM343915 embryo |
M025 embryo |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........TGTGTACGACAATTTCAAAACTG........................................................................................................................................................................................................................... | 23 | 3 | 2 | 2.00 | 4 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................................................................................................................................GACATCACACAGCAGGCG........ | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ............................................................CAATTGATTGTTTCC............................................................................................................................................................................... | 15 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................................................................................AAGGAAGCCCTCTCACTCCGCACC............................. | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................................................................................................................................GGCGACATCACACAGCCGGCGAGCA.... | 25 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ..............................................................................................................TTGCATTATAAAATCGAA.......................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .................................................................................................................................................................................................CATTAAGGAAGCCCTCTCACT.................................... | 21 | 3 | 4 | 0.25 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................................................................................................................................................................AATCCCTCTCACTCCGCCA.............................. | 19 | 3 | 20 | 0.10 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................................................................AATATCCAGGACACCCT.......................................... | 17 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................................CTCCGTACCGGCGACG...................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
|
CATATTGAACACATACTGTCAAACTTTTGACAATATGGCCGTCAAAAATTACAGGGTTAAGTTAACTAACAAAGGGGGTCTGGGGACTACTCACATGTATAGACAACAATAACGTAATATTTTAGCTTACTAAATATGAAATACGTAGGAATGATTAACGAAGTAGGAAAAGGGTGAGTTGCGGAGTGGTGTTATAGGTCCTTCGGGAGAGTGAGGCGTGGCCGCTGTAGTGTGTCGTCCGCTCGTTGTT
**************************************************************************************************************************((((.(((((((((...(((....)))..)))...))).))).)))).....................************************************************************ |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR902009 testis |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................GTAGGAATGATTAACGAAGT...................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .......................................CGTCAACACTTACAGGGTTAT.............................................................................................................................................................................................. | 21 | 3 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 |
| ........................................................................................ACTGACATCTTTAGACAACAA............................................................................................................................................. | 21 | 3 | 5 | 0.20 | 1 | 0 | 0 | 1 | 0 |
| ...............................................................................................................................................................................GAGTTGCGGAGTGTTGC.......................................................... | 17 | 2 | 12 | 0.08 | 1 | 0 | 0 | 0 | 1 |
| ..............................................................................................................................................................................................................GAGAGTGAGGCGTAG............................. | 15 | 1 | 16 | 0.06 | 1 | 0 | 0 | 0 | 1 |
| ...................................................................................AGACTACTCGCATGTA....................................................................................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 |
| .............................................................................................................................................................ACGACGTAGGGAAAGGGCGA......................................................................... | 20 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 |
Generated: 04/24/2015 at 10:32 AM