ID:

dsi_16784

Coordinate:

2r:19101508-19101657 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CTCCGATTCTCTGTTTTTCGATTAGTTAAATGAGCCCGAATTCGATGACCTTTTGTTGAACTGCAATATACTGAATGCCTTAATTCCATTTGCAAACTATATATTATAATTAACTATGTTGATTCTGAAAAACCCTTGAGTTTCGATTGCGAGTTTTCCCTAGATCTAAGTTATTTCGACAATTGATATTTCTGTTTTAGGAGGCGCAACCCCCAAAAAATTTGAGCGATACGATGTGGAAGGAGGAACG
*************************************************************************************************************..((((..(((((..((.((......)).))..)))))....))))................*******************************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
M024
male body
SRR902008
ovaries
SRR553486
Makindu_3 day-old ovaries
M053
female body
SRR618934
dsim w501 ovaries
M025
embryo
M023
head
GSM343915
embryo
SRR553487
NRT_0-2 hours eggs
SRR553488
RT_0-2 hours eggs
SRR902009
testis
..................................................................................................................................................TTGCGAGTTTTCCCTAGATCTAAGT............................................................................... 25 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
.............................................................................................................TTAACTATGTTGATTCTGAAAAACCCT.................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................CCCTAGATCTAAGTTATTTCGACAAT................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CAAAAAATTTGAGCGATACGATGTGGA.......... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................AATGAGCCCGAATTCGATGAC......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................TCTGAAAAACCCTTGAGTTTCGATTGC.................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................TGAACTGCAATATACTGAATGCCTTAA....................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................AACTATGTTGGTTCTGAAAA....................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TGTTGATTCTGAAAAACCCTTGAGTT............................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................TTCGATGACCTTTTGTTGAACTGCA......................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................TCCCTAGATCTAAGTTATTTCGACAAT................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................TTGTTGAACTGCAATATACTGAATGCC........................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................TATGTTGATTCTGAAAAACCCTTGAGT............................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................TGAACTGCAATATACTGAATG............................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AAAAAATTTGAGCGATACGATGTGGA.......... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................CTATGTTGATTCTGAAAAACCCT.................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................ACCCCCAAAAAATTTGAGCGATACGA................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................AAAATTTGAGCGATACGATGTGGAAG........ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................................................TGAACTGCAATATACTGAATGCCTT......................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................TTCGATGACCTTTTGTTGAACTGCAATA...................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................TTCGATTAGTTAAATGAGCCC..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................GACCTTTTGTTGAACTGCA......................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................ATACTGAATGCCTTAATTCC................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................TCTGTTTTAGGAGGCGCAACCCACAAA................................. 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................TGTTGAACTGCAATATACTGAATGCCTT......................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................TTAACTGCAATATACTGAATGCC........................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................TTTCTGTTTTAGGAGGCGCAACCCCCAAA................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TTTGAGCGATACGATGTGGAAGGAGG.... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........CTGTTTTTCGATTAGTTAAATG.......................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................TCGATGACCTTTTGTTGAACTGCAA........................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................................TTTGAGCGATACGATGTGGAAGGAGGA... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................ATGTTGATTCTGAAAAACCCTTGAGG............................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................ATGTTGATTCTGAAAAACCCTTGAGTTT........................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................TTGAACTGCAATATACTGAATGCC........................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TATGTTGATTCTGAAAAACCCTTGAGTTT........................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTGAGCGATACGATGTGGAAGGAGGAA.. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................TATGTTGATTCTGAAAAACCCTTGAGTT............................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................GAACTGCAATATACTGAATGCC........................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TTGCGAGTTTTCCCTAGATCTAAG................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................................TTTGAGCGATACGATGTGGAAGGA...... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................GATTGCGAGTTTTCCCTAGATCTAAGTT.............................................................................. 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TTATTTCGACAATTGATATTTCTGC....................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGCGAGTTTTCCCTAGATCTAAGT............................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGAGCGATACGATGTGGAAGGAGGAA.. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGAAAAACCCTTGAGTTTCGATTGCGAGT................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TGTTGATTCTGAAAAACCCTTGAGT............................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................................CTTTTGTTGAACTGCAATA...................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................TTCGATGACCTTTTGTTGAACTGCAA........................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................TGAACTGCAATATACTGAATGCCT.......................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
................................................................................................................................AAAACCCTTGAGTTTCGATTGCGAGT................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................TTCCCTAGATCTAAGTTATTTCGACAAT................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGAGCGATACGATGTGGAAGGAGGTCA. 27 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................TTAAAAACCCTAGAGTTTCTA........................................................................................................ 21 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................TTTGAGCGAAACGATTTGGC.......... 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................................GATACGATGTTGATGGACG.... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GAGGCTAAGAGACAAAAAGCTAATCAATTTACTCGGGCTTAAGCTACTGGAAAACAACTTGACGTTATATGACTTACGGAATTAAGGTAAACGTTTGATATATAATATTAATTGATACAACTAAGACTTTTTGGGAACTCAAAGCTAACGCTCAAAAGGGATCTAGATTCAATAAAGCTGTTAACTATAAAGACAAAATCCTCCGCGTTGGGGGTTTTTTAAACTCGCTATGCTACACCTTCCTCCTTGC
*******************************************************************************..((((..(((((..((.((......)).))..)))))....))))................*************************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total M023
head
SRR553487
NRT_0-2 hours eggs
SRR553488
RT_0-2 hours eggs
GSM343915
embryo
.................................................................................................................GATACAACCAAGACCTGTTGGGA.................................................................................................................. 23 3 1 1.00 1 0 1 0 0
........................CAATTTACTCGGGCTTAA................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................TCAGAAGGCATTTAGATTC................................................................................ 19 3 15 0.13 2 0 0 2 0
.............................................................................................................................................AAGCTAACGCTCGAAGTGG.......................................................................................... 19 3 16 0.06 1 0 0 1 0
......................................................................................................TAAGATTAAATGATACAA.................................................................................................................................. 18 2 20 0.05 1 0 0 0 1
.........................................................................................................................................CTCGAAGCCAACGCTC................................................................................................. 16 2 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:19101458-19101707 - dsi_16784 CTCCGAT--TCTCTGTTTTT-CGA----------------------------------------TTAGTTAA----ATGAG--CCCG------------------------------------------A----ATTCGATGAC-C-TTTTGTTG--AACTGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTGCAA-ACTAT-------------------ATAT---TATA-AT-----TAA---CTATGTTGATTCTG--AAA------AACCCTT-----------GAGTTTCGATT-----GCGAGT-TTTCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAAATT--TGAGCGATACGATGTG-----------------------------GAAGGAGGA--ACG
droSec2 scaffold_9:1874792-1875041 - CTCCGAT--TCTCTGTTTTT-CGA----------------------------------------TTAGTTAA----ATGAG--CCCG------------------------------------------A----ATTCGATGAC-C-TTTTGTTG--AACTGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTGCAA-ACTAT-------------------ATAT---TATA-AT-----TAA---CTATGTTGATTCTG--AAA------AACCCTT-----------GAGTTTCGATT-----GCGAGT-TTTCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAAATT--TGAGCGATACGATGTG-----------------------------GAAGGAGGA--ACG
dm3 chr2R:18572507-18572756 - CTCCGAT--TCTCTGTTTTT-CGA----------------------------------------TTAGTTAA----ATGAG--CCCG------------------------------------------A----ATTCGATGAC-C-TTTTGTTG--AACTGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTGCAA-ACTAT-------------------ATAT---TATA-AT-----TAA---CTATGTTGATTCTG--AAA------AACCCTT-----------GAGTTTCGATT-----GCGAGT-TTTCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAAATT--TGAGCGATACGATGTG-----------------------------GAAGGAGGA--ACG
droEre2 scaffold_4845:19932625-19932876 - CTCCGAT--TCTCTGTTTTT-CGA----------------------------------------TTAGTTAA----ATGAG--CCCG------------------------------------------A----ATTCGATGAC-C-TTTTGTTG--AACTGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTGCAA-GCTAT-------------------ATAT---TATA-AT-----TAA---CTATGTTGATTCTG--AAA------AACCTTT-----------GAGTTTCGATT-----GCGAGT-TTTCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCCCGA--AAAAATT--TAAGCGATACGATGTG-----------------------------GAAGCAGGA--ACG
droYak3 2R:16037881-16038142 - CTCCGAT--TCTCTGTTTTT-CGA----------------------------------------TTAGTTAA----ATGAT--CCCG------------------------------------------A----ATTCGATGAC-C-TTTTGTTG--AACTGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTGCAA-ACTAT--A-------------TACATAT---TATA-AT-----TAA---CTATGTTGATTCTG--AAAAAAAAAAACCCTT-----------AAGTTTCGATT-----GCGAGT-TTTCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAAATTTTTGAGCGATACGATGTG-----------------------------GAAGGAGAA--ACG
droEug1 scf7180000409672:6517884-6518145 - CTTCGAT--TCTCTGTTTTT-GGA----------------------------------------TTAGTTAA----ATGAG--CCCA-----------------------------------------------ATTCGATGAA-C-TTTTGTTA-GAACTGCAATAT-ACTGAATGCCTTAA--TTCCTT--------------------TTGCAA-ACTAT--------------------TAT---TATT-AT-----TAA---CTATGTTGATTCTG--TAA------A-TCCTT-----------GAGTTTCGATT-----GCAAGT--TTCCCTAG-ATCTAAGTT--------------------------TTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGAA--------------A-------TCCCCC-A--AAAAATT--T-AACGATACGATGAAGAAGAAGGAGGA--------------GGAGGAGGA-GAAGAAG
droBia1 scf7180000302143:2068316-2068564 + CCACTAT--TCTCTGTTCTT-GGA----------------------------------------TTAGTTAA----ATGAG--CCCG-----------------------------------------------ATTCGATGAC-C-CTTTGTTG--AAATGCAATA--ACCGAATGCCTTAA--T----T--------------------TTGCAA-GCTGT---------------------------ATT-AT-----TAA---CTACGTTGATTCTG--AAA------ACCCCTT-----------GAGTTTCGATT-----GTGAGT-TAGCCCTAA-ATCTAAGTT-------------------------ACTTCGA-CGAATGATATTTCTGTTTT-------AGGAGGCGAA--------------A-------CCCCC--C--AAAAATT--TCAACGGCACGGC-------------GA-C---GTTGGCGATGCTGAAGATGGA--A--
droTak1 scf7180000415538:20069-20327 - CTACGAT--TCTCTGTTTTT-CGA----------------------------------------TTAGTTAA----ATGAG--CCCG------------------------------------------ATTTGATTCGA-------TTTTGTTG--AACTGCAATAT-ACCGAATGCCTTAATATTCCTT--------------------TTGCAA-GCTAT---------------------------ATT-AT-----TAA---CTATGTTGATTCTG--AAA------ACCCCCT-----------GAGTTTCGATT-----GTGAGT-TTTCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGAA--------------A-------CCCCC--C--AAAAATT--TGAACGATACGAT-------------GA-C---GTTGGCGATGCTAAAGAT-GAAGAAG
droEle1 scf7180000491022:174546-174785 - CTCCTAT--TCTCTGTTTTT-GGA----------------------------------------TTAGTTAA----ATGAG--CCCG-----------------------------------------------ATTCGA-------TTTTGTTG--ATATGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTGCAA-ACTAT---------------------------ATT-AT-----TAA---CTATGTTGATTCTG--AAA------ACCCCCT-----------GAGTTTCGATT-----GTGAGT-TTTCCCTAG-ATCTAAGTT--------------------------TTTCGA-CGATTGATATTTCTGTTTT-------AGGAGGCGAA--------------A-------CCCCCC-AAAAAAAATT--TGAACGAT------------------GA-C---GTTGGCGACACGGAA----------G
droRho1 scf7180000779417:27576-27816 + CTCCTAT--TCTCTGTTTTTTGGA----------------------------------------TTAGTTAA----ATGAG--CCCG-----------------------------------------------ATTCGA-------TTTTGTTG--ATCTGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTTCAA-GCTAT---------------------------ATT-AT-----TAA---CTATGTTGATTCTG--AAA------ACCCCCA-----------GAGTTTCGATT-----GTGAGT-TTTTCCTAG-ATCTAAGTT--------------------------TTTCGA-CGATTGATATTTTTGTTTT-------AGGAGGCGAA--------------A-------CCCCATTA-AAAAATTT--TGAACGAT------------------GA-C---GTTGGCGACGCGAAA----------G
droFic1 scf7180000454066:2534353-2534597 - CTCTGAT--TCTCTGTTTTT-GGA----------------------------------------TTAGTTAA----ATGAG--CCCG-----------------------------------------------ATTCGATGAA-C-TTTTGTTA--ATCTGCAATAT-ACTGAATGCCTTAA--TTC-TT--------------------TTGCAA-ACTAT---------------------------ATT-AT-----TAA---CTATGTTGATTCTG--AAA------AACACCT-----------TAGTTTCGATT-----GCAAGT-TTTCCCTAG-ATCTAAGTT-------------------------A-ATCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGAA--------------A-------CCCCCC-GTAAAAAATT------CGATTCGAT-------------GA-C---GTTGGCGATGCGGAA----------G
droKik1 scf7180000302470:419698-419971 + CACCACC--TCTCTGTTTTT-GGA----------------------------------------TTAGTTAA----ATGATCACACG-----------------------------------------------ATTCGATAAA-C-TTTTGTTGAAAACTGCAATAT-ACTGAATGCCTTAA--TTC-TT--------------------TTGCAAAACTATCTA-------------TGTATAT---TATT-AT-----TAA---CTATGTTGATTCTGCGAGA------ACCCTTT-----------GAGTTTCGATT----TGCAAGT-TTTCCCTAG-ATCTAAGTTTTT-----------------------TTTCGGTCGATTGATATTTCTGTTTT-------AGGAGGCGAA---------AATCATCCTCCCACCCAC--T--AAAAATT--CGAAAGAT------------------GA-------TGGCGACGTGAAAG---------G
droAna3 scaffold_13266:10885799-10886061 + AGCCAATTTTCTCTGTTTTG-GAA----------------------------------------TTAGTTAA----ATGAG--CCCG-----------------------------------------------ATTCGATGAA-CTTTTTGTTG--ATCCGCAATAT-ACCGAATGCCTTAA--TTA-TT--------------------TTGCAA-ACTAT-------------------GTA----TATT-AT-----TAA---CTATGTTGATCCTG--AAA------A-CCACT-----------GAGTTTCCATT------------TTTCCCTAG-ACCTAAGTT---------------------------TTCGATCGATTGATATTTCTGTTTT-------AGGAGGA---T--ATAGAAAAGAAGG------CCCCC--AAAATAAATT---GAAA------------AAGGATGGCGATTAGAGATGGCGACGCGAAAG---------G
droBip1 scf7180000396428:1311668-1311921 + CCAATTT--TCTCTGTT-TT-GGA----------------------------------------TTAGTTAA----ATGAG--CCCG-----------------------------------------------ATTCGATGAA-C-TTTTGTTG--AGCCGCAATAT-ACCGAATGCCTTAA--TTA-TT--------------------TTGCAA-ACTAT---------------------------ATT-AT-----TAA---CTATGTTGATCCTG--AGA------A-CCACT-----------GAGTTTCCATT------------TTTCCCTAG-ACCTAAGTT---------------------------TTCGATCGATTGATATTTCTGTTTTT------AGGAGCC---TATATAGAAAAGAAG-------CCCTCG-A--TTAAATT---GAAA------------AAAAAGGACGATTA--GATGGCGACGCGAAA---------GG
dp5 3:4051896-4052162 - TTCCAAT--GTTATGTT-----------------------------------------------------AAGTACTGGAG-TCCCG-----------------------------------------------ATTCGAAGAA-C-TTTTGTTG--AGCCGCAATAT-ACCGAATGCCTTAA--TTCTTT--------------------TTGCAAAACTA-----------------------T---TATT-AT-----TAA---CTATGTTGATTCTT--GAG------A-TCCTT-----------GATTTTTGATTACATTACCCGTTTACCCCTAG-CCCTAAGATCTCCATTGATTGATTGA---TT---GATTTAT-TGATTGATATTTCTGTTGTGTCACGTTGACGGAGAA--------------G-------CCCCC--A--GAAAG---------GAGACGAC-------------GAAC-----GGATCATGCGGAAG---------G
droPer2 scaffold_2:4237914-4238180 - TTCCAAT--GTTATGTT-----------------------------------------------------AAGTACTGGAG-TCCCG-----------------------------------------------ATTCGAAGAA-C-TTTTGTTG--AGCCGCAATAT-ACCGAATGCCTTAA--TTCTTT--------------------TTGCAAAACTA-----------------------T---TATT-AT-----TAA---CTATGTTGATTCTT--GAG------A-TCCTT-----------GATTTTTGATTACATTACCCGTTTACCCCTAG-CCCTAAGATCTCCATTGATTGATTGA---TT---GATTTAT-TGATTGATATTTCTGTTGTGTCACGTTGACGGAGAA--------------G-------CCCCC--A--GAAAG---------GAGACGAC-------------GAAC-----GGATCATGCGGAAG---------G
droWil2 scf2_1100000004513:4030422-4030764 + AACAAAT--GTTATGTTTTTAAGATGAATTAGCACAACAAACAAGAAGAACAAACAAAACAAATTCAGTTAA----ATTAT--TCAG------------------------------------------G----AACTTTTTAT-T-ATTTGTTA--AACTGCAATATTACAGAATGCCTTAT--TTCAAAAAAACAAAAACAAAACAAAAATCTA--ACTA---A-------------TGTATAT---GAAA-CGTAAAGAAACTAAAATGTTGAACGAATGAAA------AGTCTTG-AAATTTCT--CAATTTCTTAT-----AC--ATATTTCTATAGCACTTAAGTTTTTTGGAAATTATTTTGTGTATAAACTTTTGA-TTATTGATATTTTTGTTGT-------AGCATTCAGA----------------------------------AAA----TGA------------------------------GTGAAGGATACGAAAGA--GA--TCG
droVir3 scaffold_12875:13789827-13790111 - TTTCGAT--TT-------------------------------------------------------AGCTCA----A-GTT--CCCGATCTGTCAGTTTTGTTGA--ACCAA-----------------T----TTTTTTTAAA-T-TTCAGTCC--AAATGCAATATTTATAAAGGCCTTAT--TTCAAG--------------------ACAGA--AATATCTAATTATTATTATTATTATTATTATTATTATG-----TAA---CTATGTTGAAC----------------TCTCTGACGTTTCTTTGAGTATC----------CAAGT-TT-----AG-CATTAAGTTTAA--------------TAT-----CATTTTA-TTATTGATATTTTTGTTGTAGTT----TCAGGCGAAT--ACACACACACAC---------------------ACA--CACACACA------------------CA-C---ATAGAA-------AAACATGA--AGA
droMoj3 scaffold_6496:9197559-9197596 - CTCCGAT--CT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT-----CAG---TTTTGTTGAATCT------------------------------GTGTTTCGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:17460126-17460430 + CTCTGTT--TA----TTTTT----------------------------------------------AGCTAA----AGTCA--ACCGATCTGTCAGTTTTGTTAAAAACCTATGTACGAATATGTATAGA----ATGTTTGTATGATTTCAGTCT--AAACGCAATATTTATAAATGCCTTAT--TTGAAGAC---CGAGACC-GACTAAAGTTTAA-ACTAT---------------------------ATA-TG-----TAA---TTATGTTGAACTCT--CTA------AACG-TT------TATTTGAGT------------GTATAC-AATTTGTAG-CATTAAGTTT-A--------------TAT-----CATTTGA-TTATTGCTATTTCTGTTGTAGTT----TCAGGCAAAT--ACACACACACAC--ACACACAC--------------------ACACACAATTCG-----------------------------AAAACATGA--AGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTCCGAT--TCTCTGTTTTT-CGA----------------------------------------TTAGTTAA----ATGAG--CCCG------------------------------------------A----ATTCGATGAC-C-TTTTGTTG--AACTGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTGCAA-ACTAT-------------------ATAT---TATA-AT-----TAA---CTATGTTGATTCTG--AAA------AACCCTT-----------GAGTTTCGATT-----GCGAGT-TTTCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAAATT--TGAGCGATACGATGTG-----------------------------GAAGGAGGA--ACGSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................TT-----GCGAGT-TTTCCCTAG-ATCTAAGT..........................................................................................................................................................................2512.00200000002000000000
...............................................................................................................................................................................................................................................................T-----TAA---CTATGTTGATTCTG--AAA------AACCCT...............................................................................................................................................................................................................................2712.00200000020000000000
................................................................................................................................................................................................................................................................................................................................................CCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAAT....................................................................................................................................2611.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................C--A--AAAAATT--TGAGCGATACGATGTG-----------------------------GA............2711.00100000010000000000
.......................................................................A----ATGAG--CCCG------------------------------------------A----ATTCGATGAC-........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
.....................................................................................................................................................................................................................................................................................TCTG--AAA------AACCCTT-----------GAGTTTCGATT-----GC.................................................................................................................................................................................................2711.00100010000000000000
.........................................................................................................................................................TG--AACTGCAATAT-ACTGAATGCCTTAA--................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
..............................................................................................................................................................................................................................................................................TGTTGATTCTG--AAA------AACCCTT-----------GAGTT..............................................................................................................................................................................................................2611.00100000010000000000
.......................................................................................................................................TTCGATGAC-C-TTTTGTTG--AACTGCA.....................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................TCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAAT....................................................................................................................................2711.00100000010000000000
.....................................................................................................................................................TTGTTG--AACTGCAATAT-ACTGAATGCC......................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
............................................................................................................................................................................................................................................................................TATGTTGATTCTG--AAA------AACCCTT-----------GAGT...............................................................................................................................................................................................................2711.00100000001000000000
.........................................................................................................................................................TG--AACTGCAATAT-ACTGAATG........................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAAAATT--TGAGCGATACGATGTG-----------------------------GA............2611.00100000010000000000
...........................................................................................................................................................................................................................................................................CTATGTTGATTCTG--AAA------AACCCT...............................................................................................................................................................................................................................2311.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------CCCCC--A--AAAAATT--TGAGCGATACGA...............................................2611.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATT--TGAGCGATACGATGTG-----------------------------GAAG..........2611.00100000000001000000
.........................................................................................................................................................TG--AACTGCAATAT-ACTGAATGCCTT....................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.......................................................................................................................................TTCGATGAC-C-TTTTGTTG--AACTGCAATA..................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
..................TT-CGA----------------------------------------TTAGTTAA----ATGAG--CCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.............................................................................................................................................GAC-C-TTTTGTTG--AACTGCA.....................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
......................................................................................................................................................................AT-ACTGAATGCCTTAA--TTCC............................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
......................................................................................................................................................TGTTG--AACTGCAATAT-ACTGAATGCCTT....................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AA..................................................................2911.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TGAGCGATACGATGTG-----------------------------GAAGGAGG......2611.00100000000000010000
............CTGTTTTT-CGA----------------------------------------TTAGTTAA----ATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
........................................................................................................................................TCGATGAC-C-TTTTGTTG--AACTGCAA....................................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TGAGCGATACGATGTG-----------------------------GAAGGAGGA--...2711.00100000000000010000
.............................................................................................................................................................................................................................................................................ATGTTGATTCTG--AAA------AACCCTT-----------GAGG...............................................................................................................................................................................................................2611.00101000000000000000
.............................................................................................................................................................................................................................................................................ATGTTGATTCTG--AAA------AACCCTT-----------GAGTTT.............................................................................................................................................................................................................2811.00101000000000000000
........................................................................................................................................................TTG--AACTGCAATAT-ACTGAATGCC......................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
............................................................................................................................................................................................................................................................................TATGTTGATTCTG--AAA------AACCCTT-----------GAGTTT.............................................................................................................................................................................................................2911.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TGAGCGATACGATGTG-----------------------------GAAGGAGGA--A..2711.00100000000000010000
............................................................................................................................................................................................................................................................................TATGTTGATTCTG--AAA------AACCCTT-----------GAGTT..............................................................................................................................................................................................................2811.00100000010000000000
..........................................................................................................................................................G--AACTGCAATAT-ACTGAATGCC......................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................TT-----GCGAGT-TTTCCCTAG-ATCTAAG...........................................................................................................................................................................2411.00100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TGAGCGATACGATGTG-----------------------------GAAGGA........2411.00100000000000010000
.............................................................................................................................................................................................................................................................................................................................GATT-----GCGAGT-TTTCCCTAG-ATCTAAGTT-------------------------................................................................................................................................................2811.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................TT-------------------------ATTTCGA-CAATTGATATTTCTGC........................................................................................................................2511.00101000000000000000
................................................................................................................................................................................................................................................................................................................................T-----GCGAGT-TTTCCCTAG-ATCTAAGT..........................................................................................................................................................................2411.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCGATACGATGTG-----------------------------GAAGGAGGA--A..2611.00100000000000010000
.......................................................................................................................................................................................................................................................................................TG--AAA------AACCCTT-----------GAGTTTCGATT-----GCGAGT-............................................................................................................................................................................................2911.00100000010000000000
..............................................................................................................................................................................................................................................................................TGTTGATTCTG--AAA------AACCCTT-----------GAGT...............................................................................................................................................................................................................2511.00100000001000000000
.................................................................................................................................................C-TTTTGTTG--AACTGCAATA..................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.......................................................................................................................................TTCGATGAC-C-TTTTGTTG--AACTGCAA....................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.........................................................................................................................................................TG--AACTGCAATAT-ACTGAATGCCT.....................................................................................................................................................................................................................................................................................................................................................2411.00100000000000001000
............................................................................................................................................................................................................................................................................................AA------AACCCTT-----------GAGTTTCGATT-----GCGAGT-............................................................................................................................................................................................2611.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................TTCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAAT....................................................................................................................................2811.00100000010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCGATACGATGTG-----------------------------GAAGGAGGT--CA.2711.00100000000000010000
droSec2
CTCCGAT--TCTCTGTTTTT-CGA----------------------------------------TTAGTTAA----ATGAG--CCCG------------------------------------------A----ATTCGATGAC-C-TTTTGTTG--AACTGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTGCAA-ACTAT-------------------ATAT---TATA-AT-----TAA---CTATGTTGATTCTG--AAA------AACCCTT-----------GAGTTTCGATT-----GCGAGT-TTTCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAAATT--TGAGCGATACGATGTG-----------------------------GAAGGAGGA--ACGSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
.............................................................................................................................................................................................................................................................................................................................................TTTCCCTAG-ATCTAAGTT-------------------------ATTTCG..........................................................................................................................................2411.0010010
...........................................................................................................................................................................................................................................................................................................................TCGATT-----GCGAGT-TTTCCCTAG-ATC...............................................................................................................................................................................2411.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGATGTG-----------------------------GAAGGAGGA--AC.2011.0010100
...................................................................................................................................................................................................................................................................................................................................................................................................ATTGATATTTCTGTTTT-------AGGAG.........................................................................................................2211.0010100
.........................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTGTTTT-------AGGAGGCGC.....................................................................................................2011.0010010
dm3
CTCCGAT--TCTCTGTTTTT-CGA----------------------------------------TTAGTTAA----ATGAG--CCCG------------------------------------------A----ATTCGATGAC-C-TTTTGTTG--AACTGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTGCAA-ACTAT-------------------ATAT---TATA-AT-----TAA---CTATGTTGATTCTG--AAA------AACCCTT-----------GAGTTTCGATT-----GCGAGT-TTTCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAAATT--TGAGCGATACGATGTG-----------------------------GAAGGAGGA--ACGSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AA..................................................................281113.00113000000000000000000000000000000000000000100000000000000000000000000000000000008412200000000000000000000000000000000000000000000000000000000000000000000020200000000000000000000000000000000000001000000000000000001260000000000010000000000000000000000000000000000000000000000000000000000000000000000000500000003010010000000010006000000
...............................................................................................................................................................................................................................................................................................................................TT-----GCGAGT-TTTCCCTAG-ATCTAAGT..........................................................................................................................................................................25198.009800000000000000000000000000000000000000100000000000100000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000020000000000800000000000000000010000000001000000000000000000600000000201022800000000000000000000000000000000000000000000000000000000000000002000110600005012000000001000010133610000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--A...................................................................27163.0063000000000000000000000000000000000000001000000000100000000000000000000000000003120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000030010000000000000000000000000000000000000000000000100000000000000000000000000000001100001001000000000000000113400000
............................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AA..................................................................27150.005000000000000000000000000000000000000000000000000000000000000000000000000000000753200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000003100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TGAGCGATACGATGTG-----------------------------GAAGGAGG......26148.004800000000000000000000000000000000000000100000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001200020501100000000000000000000000000000000000000000000000000000000000000000010300000001000010000000000032210000
..........................................................................................................................................................................................................................................................................................................................TTCGATT-----GCGAGT-TTTCCCTAG-ATC...............................................................................................................................................................................25148.004800000000000000000000000000000000000000000000000001010000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000010000000001000402031130000000000000000000000000100000001000000000000000000000000000000100000040000000000000000000001010800000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------CCCCC--A--AAAAATT--TGAGCGATACGA...............................................26143.0043000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000002000000
.........................................................................................................................................................................................................................................................................................................................TTTCGATT-----GCGAGT-TTTCCCTAG-ATC...............................................................................................................................................................................26141.004100000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000011000000001000000000102110900100000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000001300000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCC--A--AAAAATT--TGAGCGATACGA...............................................25129.002900000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000100000002000000
............................................................................................................................................................................................................................................................................TATGTTGATTCTG--AAA------AACCCTT-----------GAGT...............................................................................................................................................................................................................27124.00240000000000000000000000010000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000300100050000011000000000000000000700000
................................................................................................................................................................................................................................................................................................................................T-----GCGAGT-TTTCCCTAG-ATCTAAGT..........................................................................................................................................................................24119.00190000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000300000000000000000010000000000000000000000000000000000000000000000000000000000000000000000030000200000000000000000000600000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCC--A--AAAAATT--TGAGCGATACGATGTG-----------------------------..............27118.00180000000000000000000000010000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000100000000000000000800000
...........................................................................................................................................................................................................................................................................................................................TCGATT-----GCGAGT-TTTCCCTAG-ATC...............................................................................................................................................................................24118.00180000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020310070000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TGAGCGATACGATGTG-----------------------------GAAGGAGGA--...27118.001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000110100000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TGAGCGATACGATGTG-----------------------------GAAGGAGG......25117.001700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000002001100100
............................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--A...................................................................26113.00130000000000000000000000000000000000000000001000000000000000000000000000000000010300000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000500000
.....................................................................................................................................................................................................................................................................................................................................................................................................TGATATTTCTGTTTT-------AGGAGGCGCA--------------......................................................................................25113.00130000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200071000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--....................................................................26112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001400000
..............................................................................................................................................................................................................................................................................TGTTGATTCTG--AAA------AACCCTT-----------GAGT...............................................................................................................................................................................................................25112.00120000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000010100010000000000000000000000000000000000000000000000000000000000000000100000020000100000000000000000000200000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AA..................................................................29111.00110000000000000000000000000000000000000000000000000000000000000000000000000000002020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000600000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--A...................................................................28111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000010000000800000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AA..................................................................25111.00110000000000000000000000000000000000000000000100000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000500000
....................................................................................................................................................................................................................................................................................................................................................................................................TTGATATTTCTGTTTT-------AGGAGGCGCA--------------......................................................................................26111.00110000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100110000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000500000
...........................................................................................................................................................................................................................................................................................................................TCGATT-----GCGAGT-TTTCCCTAG-ATCTAAGT..........................................................................................................................................................................29110.00100000000000000000000000000000000000000000000000000000000001000000000000000000025110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCGATACGATGTG-----------------------------GAAGGAGGA--AC.27110.00100000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000030000000000001000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TGAGCGATACGATGTG-----------------------------GAAGGAGGA--AC.29110.00100000000000000000000000000000000000000000000000000000000000000000000000000000011010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
............................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAA................................................................2919.0090000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAA.................................................................2619.0090000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000500000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCC--A--AAAAATT--TGAGCGATACGA...............................................2418.0080000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000020000000100000000010000000200000
.........................................................................................................................................................TG--AACTGCAATAT-ACTGAATGCCTT....................................................................................................................................................................................................................................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000200110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................T-----------GAGTTTCGATT-----GCGAGT-TTTCCC......................................................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GATTCTG--AAA------AACCCTT-----------GAGT...............................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000
...............................................................................................................................................................................................................................................................T-----TAA---CTATGTTGATTCTG--AAA------AACCCT...............................................................................................................................................................................................................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000010110000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAAA...............................................................2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000011210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
................TTTT-CGA----------------------------------------TTAGTTAA----ATGAG--C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000001000000000000020000000000000000000000003000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAA.................................................................2917.0070000000000000000000000000000000000000000000000000000000000000000000000000000021200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
............................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAA.................................................................2817.0070000000000000000000000000000000000000000000000000000100000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
...............................................................................................................................................................................................................................................................................................................................................TCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAATT...................................................................................................................................2817.0070000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAA................................................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000
................................................................................................................................................................................................................................................................................................................................................................................................................TTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAAA...............................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000011410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------A-------CCCCC--A--AAAAATT--TGAGCGATACGA...............................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000500000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TGAGCGATACGATGTG-----------------------------GAAGGAG.......2517.0070000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000200000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................T-----------GAGTTTCGATT-----GCGAGT-TTTCCCTAG-A.................................................................................................................................................................................2816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000400000
........................................................................................................................................................................................................................................................................................................................................................................................................TATTTCTGTTTT-------AGGAGGCGCA--------------A-------CC............................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000300000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCC--A--AAAAATT--TGAGCGATACGATG.............................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000100000000000000001000100000
.....................................................................TAA----ATGAG--CCCG------------------------------------------A----ATTCGATGAC-C-TTT...................................................................................................................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000100000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................TT-----GCGAGT-TTTCCCTAG-ATCTAAGTT-------------------------A...............................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TGAGCGATACGATGTG-----------------------------GAAGGAGGA--...2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000300000
.......................................................................................................................................................................T-ACTGAATGCCTTAA--TTCCAT--------------------TTGCAA-AC.............................................................................................................................................................................................................................................................................................................2916.0060000000000000000000000000000000000000000000000000000000000000000000000000000012030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................C--A--AAAAATT--TGAGCGATACGATGTG-----------------------------..............2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000200000
...............................................................................................................................................................................................................................................................................................................................................TCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAAT....................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATT--TGAGCGATACGATGTG-----------------------------GAAGGA........2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000030001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--.......................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TGAGCGATACGATGTG-----------------------------GAAGGA........2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000
.........................................................................................................................................................................ACTGAATGCCTTAA--TTCCAT--------------------T.....................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000
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..........CTCTGTTTTT-CGA----------------------------------------TTAGTTAA----.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000
.............................................................................................................................................................................................................................................................................................A------AACCCTT-----------GAGTTTCGATT-----GCGAGT-T...........................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AA---CTATGTTGATTCTG--AAA------AA...................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.......................A----------------------------------------TTAGTTAA----ATGAG--CCCG------------------------------------------A----ATTCGAT............................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.....................................................................................CG------------------------------------------A----ATTCGATGAC-C-TTTTGTTG--AAC.........................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................T-----GCGAGT-TTTCCCTAG-ATCTAAGTT-------------------------AT..............................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................TGAG--CCCG------------------------------------------A----ATTCGATGAC-C-TTTTG.................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................CGATGAC-C-TTTTGTTG--AACTGC......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................GATGAC-C-TTTTGTTG--AACTG.......................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................GTTAA----ATGAG--CCCG------------------------------------------A----ATTCGATG...........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GATATTTCTGTTTT-------AGGAGGCGCA--------------A-------CC............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CGATT-----GCGAGT-TTTCCCTAG-ATCTAAGT..........................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGATGTG-----------------------------GAAGGAGG......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
CTCCGAT--TCTCTGTTTTT-CGA----------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--G...................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................TTTTGTTG--AACTGCAATAT-ACTGAATGCCT.....................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AGT-TTTCCCTAG-ATCTAAGTT-------------------------................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................TTAA----ATGAG--CCCG------------------------------------------A----ATTCGATGAC-C-T.....................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................TCGATT-----GCGAGT-TTTCCCTAG-ATCTAAT...........................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TTGATTCTG--AAA------AACCCTT-----------GAGTTTCGA..........................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........TCTGTTTTT-CGA----------------------------------------TTAGTTAA----A............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAA................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................T-----TAA---CTATGTTGATTCTG--AAA------.....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT--TGAGCGATACGATGTG-----------------------------GA............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATACGATGTG-----------------------------GAAGGAGG......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TGATATTTCTGTTTT-------AGGAGGCGCA--------------A-------CCC...........................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CAATTGATATTTCTGTTTT-------AGGAGGCG......................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATT--TGAGCGATACGATGT............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................TTTGTTG--AACTGCAATAT-ACTG............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CCTT-----------GAGTTTCGATT-----GCGAGT-............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................AATGCCTTAA--TTCCAT--------------------TTGCA.................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAAAAA--...........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TT-------------------------ATTTCGA-CAATTGATATTTCTGTTT......................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TGAGCGATACGATGTG-----------------------------..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................TCTG--AAA------AACCCTT-----------GAGTTT.............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATT--TGAGCGATACGATGTG-----------------------------GAAGGAGG......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GTTAA----ATGAG--CCCG------------------------------------------A----ATTCGATGAC-C-......................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................GAG--CCCG------------------------------------------A----ATTCGATGAC-C-TTTTGT................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CG------------------------------------------A----ATTCGATGAC-C-TTTTGTT...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCC..........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAA.................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CTCCGAT--TCTCTGTTTTT-CGA----------------------------------------TTAGTTAA----ATGAG--CCCG------------------------------------------A----ATTCGATGAC-C-TTTTGTTG--AACTGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTGCAA-GCTAT-------------------ATAT---TATA-AT-----TAA---CTATGTTGATTCTG--AAA------AACCTTT-----------GAGTTTCGATT-----GCGAGT-TTTCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCCCGA--AAAAATT--TAAGCGATACGATGTG-----------------------------GAAGCAGGA--ACGSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................ATT-----GCGAGT-TTTCCCTAG-ATCTAAGT..........................................................................................................................................................................2615.0050000005
..........................................................................................................................................................................................................................................................................................................................TTCGATT-----GCGAGT-TTTCCCTAG-ATC...............................................................................................................................................................................2511.0011000000
........................................................................................................................................................................................................................................................................................................................GTTTCGATT-----GCGAGT-TTTCCC......................................................................................................................................................................................2111.0011000000
....................................................................................................................................................TTTGTTG--AACTGCAATAT-ACT.............................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..........................................................................................................................................................................................................................................................................................................................................GT-TTTCCCTAG-ATCTAAGTT-------------------------................................................................................................................................................2011.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGCGATACGATGTG-----------------------------GAAGCAGG......2411.0011000000
......T--TCTCTGTTTTT-CGA----------------------------------------TTAGTTAA----A............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................CGA-CAATTGATATTTCTGT........................................................................................................................1911.0010100000
.......................................................................................................................................................................................................................................................................................................CTTT-----------GAGTTTCGATT-----GCGAGT-TTTCCC......................................................................................................................................................................................2711.0011000000
........................................................................................................................................................................................................................................................................................................TTT-----------GAGTTTCGATT-----GCGAGT-TTTCCC......................................................................................................................................................................................2611.0011000000
..........................................................................................................................................................................................................................................................ATA-AT-----TAA---CTATGTTGATTCTG--AAA------AACC.................................................................................................................................................................................................................................2911.0011000000
......................................................................................................................................................................................................................................................................................................CCTTT-----------GAGTTTCGATT-----GCGAGT-TT..........................................................................................................................................................................................2411.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACGATGTG-----------------------------GAAGCAGGA--ACG2311.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATT--TAAGCGATACGATGTG-----------------------------G.............2111.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATGTG-----------------------------GAAGCAGGA--ACG2011.0010000010
..........CTCTGTTTTT-CGA----------------------------------------TTAGTTAA----ATGAG--CC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
droYak3
CTCCGAT--TCTCTGTTTTT-CGA----------------------------------------TTAGTTAA----ATGAT--CCCG------------------------------------------A----ATTCGATGAC-C-TTTTGTTG--AACTGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTGCAA-ACTAT--A-------------TACATAT---TATA-AT-----TAA---CTATGTTGATTCTG--AAAAAAAAAAACCCTT-----------AAGTTTCGATT-----GCGAGT-TTTCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGCA--------------A-------CCCCC--A--AAAAATTTTTGAGCGATACGATGTG-----------------------------GAAGGAGAA--ACGSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................AAACCCTT-----------AAGTTTCGATT-----GCGAGT-............................................................................................................................................................................................2512.00200000020000
..................................................................................................................................................................................................................................................................................................AAAACCCTT-----------AAGTTTCGATT-----GCGAGT-............................................................................................................................................................................................2611.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACGATGTG-----------------------------GAAGGAGAA--A..2111.00101000000000
................................................................................................................................................................TGCAATAT-ACTGAATGCCT.....................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..........................................................................................................................................GATGAC-C-TTTTGTTG--AACTGCA.....................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATTGATATTTCTGTTTT-------AGGA..........................................................................................................2111.00100000010000
...............................................................................................................................................................................................................................................................................................................................................TCCCTAG-ATCTAAGTT-------------------------ATTT............................................................................................................................................2011.00100010000000
.......................................................................................................................................................................................................................................................................................................CCTT-----------AAGTTTCGATT-----GCGAGT-............................................................................................................................................................................................2111.00100000010000
........................................................................................................................................TCGATGAC-C-TTTTGTTG--AACTGCAATA..................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
...........................................................................................................................................................................................................................................................................................................................TCGATT-----GCGAGT-TTTCCCTAG-ATCTAAGT..........................................................................................................................................................................2911.00100000010000
.........................................................................................................................................................TG--AACTGCAATAT-ACTGAATGCC......................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..............................................................................GAT--CCCG------------------------------------------A----ATTCGATGAC-C-TTTTGTT...............................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TGATATTTCTGTTTT-------AGGAGGC.......................................................................................................2211.00100000010000
........................................................................................................................................................................................................................................................................................................................GTTTCGATT-----GCGAGT-TTTCCCTA....................................................................................................................................................................................2311.00101000000000
......................................................................................G------------------------------------------A----ATTCGATGAC-C-TTTTGTTG--AACTGCA.....................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TGATATTTCTGTTTT-------AGGA..........................................................................................................1911.00100100000000
droEug1
CTTCGAT--TCTCTGTTTTT-GGA----------------------------------------TTAGTTAA----ATGAG--CCCA-----------------------------------------------ATTCGATGAA-C-TTTTGTTA-GAACTGCAATAT-ACTGAATGCCTTAA--TTCCTT--------------------TTGCAA-ACTAT--------------------TAT---TATT-AT-----TAA---CTATGTTGATTCTG--TAA------A-TCCTT-----------GAGTTTCGATT-----GCAAGT--TTCCCTAG-ATCTAAGTT--------------------------TTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGAA--------------A-------TCCCCC-A--AAAAATT--T-AACGATACGATGAAGAAGAAGGAGGA--------------GGAGGAGGA-GAAGAAGSizeHit CountTotal NormTotal
No Reads
droBia1
CCACTAT--TCTCTGTTCTT-GGA----------------------------------------TTAGTTAA----ATGAG--CCCG-----------------------------------------------ATTCGATGAC-C-CTTTGTTG--AAATGCAATA--ACCGAATGCCTTAA--T----T--------------------TTGCAA-GCTGT---------------------------ATT-AT-----TAA---CTACGTTGATTCTG--AAA------ACCCCTT-----------GAGTTTCGATT-----GTGAGT-TAGCCCTAA-ATCTAAGTT-------------------------ACTTCGA-CGAATGATATTTCTGTTTT-------AGGAGGCGAA--------------A-------CCCCC--C--AAAAATT--TCAACGGCACGGC-------------GA-C---GTTGGCGATGCTGAAGATGGA--A--SizeHit CountTotal NormTotal
No Reads
droTak1
CTACGAT--TCTCTGTTTTT-CGA----------------------------------------TTAGTTAA----ATGAG--CCCG------------------------------------------ATTTGATTCGA-------TTTTGTTG--AACTGCAATAT-ACCGAATGCCTTAATATTCCTT--------------------TTGCAA-GCTAT---------------------------ATT-AT-----TAA---CTATGTTGATTCTG--AAA------ACCCCCT-----------GAGTTTCGATT-----GTGAGT-TTTCCCTAG-ATCTAAGTT-------------------------ATTTCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGAA--------------A-------CCCCC--C--AAAAATT--TGAACGATACGAT-------------GA-C---GTTGGCGATGCTAAAGAT-GAAGAAGSizeHit CountTotal NormTotal
No Reads
droEle1
CTCCTAT--TCTCTGTTTTT-GGA----------------------------------------TTAGTTAA----ATGAG--CCCG-----------------------------------------------ATTCGA-------TTTTGTTG--ATATGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTGCAA-ACTAT---------------------------ATT-AT-----TAA---CTATGTTGATTCTG--AAA------ACCCCCT-----------GAGTTTCGATT-----GTGAGT-TTTCCCTAG-ATCTAAGTT--------------------------TTTCGA-CGATTGATATTTCTGTTTT-------AGGAGGCGAA--------------A-------CCCCCC-AAAAAAAATT--TGAACGAT------------------GA-C---GTTGGCGACACGGAA----------GSizeHit CountTotal NormTotal
No Reads
droRho1
CTCCTAT--TCTCTGTTTTTTGGA----------------------------------------TTAGTTAA----ATGAG--CCCG-----------------------------------------------ATTCGA-------TTTTGTTG--ATCTGCAATAT-ACTGAATGCCTTAA--TTCCAT--------------------TTTCAA-GCTAT---------------------------ATT-AT-----TAA---CTATGTTGATTCTG--AAA------ACCCCCA-----------GAGTTTCGATT-----GTGAGT-TTTTCCTAG-ATCTAAGTT--------------------------TTTCGA-CGATTGATATTTTTGTTTT-------AGGAGGCGAA--------------A-------CCCCATTA-AAAAATTT--TGAACGAT------------------GA-C---GTTGGCGACGCGAAA----------GSizeHit CountTotal NormTotal
No Reads
droFic1
CTCTGAT--TCTCTGTTTTT-GGA----------------------------------------TTAGTTAA----ATGAG--CCCG-----------------------------------------------ATTCGATGAA-C-TTTTGTTA--ATCTGCAATAT-ACTGAATGCCTTAA--TTC-TT--------------------TTGCAA-ACTAT---------------------------ATT-AT-----TAA---CTATGTTGATTCTG--AAA------AACACCT-----------TAGTTTCGATT-----GCAAGT-TTTCCCTAG-ATCTAAGTT-------------------------A-ATCGA-CAATTGATATTTCTGTTTT-------AGGAGGCGAA--------------A-------CCCCCC-GTAAAAAATT------CGATTCGAT-------------GA-C---GTTGGCGATGCGGAA----------GSizeHit CountTotal NormTotal
No Reads
droKik1
CACCACC--TCTCTGTTTTT-GGA----------------------------------------TTAGTTAA----ATGATCACACG-----------------------------------------------ATTCGATAAA-C-TTTTGTTGAAAACTGCAATAT-ACTGAATGCCTTAA--TTC-TT--------------------TTGCAAAACTATCTA-------------TGTATAT---TATT-AT-----TAA---CTATGTTGATTCTGCGAGA------ACCCTTT-----------GAGTTTCGATT----TGCAAGT-TTTCCCTAG-ATCTAAGTTTTT-----------------------TTTCGGTCGATTGATATTTCTGTTTT-------AGGAGGCGAA---------AATCATCCTCCCACCCAC--T--AAAAATT--CGAAAGAT------------------GA-------TGGCGACGTGAAAG---------GSizeHit CountTotal NormTotal
No Reads
droAna3
AGCCAATTTTCTCTGTTTTG-GAA----------------------------------------TTAGTTAA----ATGAG--CCCG-----------------------------------------------ATTCGATGAA-CTTTTTGTTG--ATCCGCAATAT-ACCGAATGCCTTAA--TTA-TT--------------------TTGCAA-ACTAT-------------------GTA----TATT-AT-----TAA---CTATGTTGATCCTG--AAA------A-CCACT-----------GAGTTTCCATT------------TTTCCCTAG-ACCTAAGTT---------------------------TTCGATCGATTGATATTTCTGTTTT-------AGGAGGA---T--ATAGAAAAGAAGG------CCCCC--AAAATAAATT---GAAA------------AAGGATGGCGATTAGAGATGGCGACGCGAAAG---------GSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
................................................................TTAGTTAA----ATGAG--CCCG-----------------------------------------------ATTCGATGAA-........................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................GATTGATATTTCTGTTTT-------AGG...........................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGATTAGAGATGGCGACGCG..............2111.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAGAGATGGCGACGCGA.............2011.001000001
droBip1
CCAATTT--TCTCTGTT-TT-GGA----------------------------------------TTAGTTAA----ATGAG--CCCG-----------------------------------------------ATTCGATGAA-C-TTTTGTTG--AGCCGCAATAT-ACCGAATGCCTTAA--TTA-TT--------------------TTGCAA-ACTAT---------------------------ATT-AT-----TAA---CTATGTTGATCCTG--AGA------A-CCACT-----------GAGTTTCCATT------------TTTCCCTAG-ACCTAAGTT---------------------------TTCGATCGATTGATATTTCTGTTTTT------AGGAGCC---TATATAGAAAAGAAG-------CCCTCG-A--TTAAATT---GAAA------------AAAAAGGACGATTA--GATGGCGACGCGAAA---------GGSizeHit CountTotal NormTotal
No Reads
dp5
TTCCAAT--GTTATGTT-----------------------------------------------------AAGTACTGGAG-TCCCG-----------------------------------------------ATTCGAAGAA-C-TTTTGTTG--AGCCGCAATAT-ACCGAATGCCTTAA--TTCTTT--------------------TTGCAAAACTA-----------------------T---TATT-AT-----TAA---CTATGTTGATTCTT--GAG------A-TCCTT-----------GATTTTTGATTACATTACCCGTTTACCCCTAG-CCCTAAGATCTCCATTGATTGATTGA---TT---GATTTAT-TGATTGATATTTCTGTTGTGTCACGTTGACGGAGAA--------------G-------CCCCC--A--GAAAG---------GAGACGAC-------------GAAC-----GGATCATGCGGAAG---------GSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAC-----GGATCATGCGGAAG---------G1911.0010000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------CCCCC--A--GAAAG---------GAGACGAC-------------.................................2011.0010100000000
.........................................................................................................................................CGAAGAA-C-TTTTGTTG--AGCCGCAATA..................................................................................................................................................................................................................................................................................................................................................................2611.0010000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGACGGAGAA--------------G-------CCCCC--A--G...................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCC--A--GAAAG---------GAGACGAC-------------GAAC-----GGAT....................2711.0010100000000
..............................................................................GAG-TCCCG-----------------------------------------------ATTCGAAGAA-C-TT....................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGTCACGTTGACGGAGAA--------------G-------CCCCC--A--....................................................................2511.0010100000000
........................................................................................................................................TCGAAGAA-C-TTTTGTTG--AGCCGCAATA..................................................................................................................................................................................................................................................................................................................................................................2711.0010000000010
...............................................................................................................................................................................................................................................................................................................................................................................GA---TT---GATTTAT-TGATTGA.................................................................................................................................1840.2510100000000
....................................................................................................................................................................................................................................................................................................................................................................ATTGATTGATTGA---TT---GATT............................................................................................................................................19200.0510000010000
droPer2
TTCCAAT--GTTATGTT-----------------------------------------------------AAGTACTGGAG-TCCCG-----------------------------------------------ATTCGAAGAA-C-TTTTGTTG--AGCCGCAATAT-ACCGAATGCCTTAA--TTCTTT--------------------TTGCAAAACTA-----------------------T---TATT-AT-----TAA---CTATGTTGATTCTT--GAG------A-TCCTT-----------GATTTTTGATTACATTACCCGTTTACCCCTAG-CCCTAAGATCTCCATTGATTGATTGA---TT---GATTTAT-TGATTGATATTTCTGTTGTGTCACGTTGACGGAGAA--------------G-------CCCCC--A--GAAAG---------GAGACGAC-------------GAAC-----GGATCATGCGGAAG---------GSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCC--A--GAAAG---------GAGACGAC-------------GAAC-----........................2214.004400000
...........................................................................................................................................................................................................................................................................................................................................................................GATTGA---TT---GATTTAT-TGATTGAT................................................................................................................................2312.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--------------G-------CCCCC--A--GAAAG---------GAGACGAC-------------GAAC-----........................2711.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------GAAC-----GGATCATGCGGAA...........1811.001001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------G-------CCCCC--A--GAAAG---------GAGACGAC-------------GAAC-----........................2511.001100000
................................................................................G-TCCCG-----------------------------------------------ATTCGAAGAA-C-TTTTGT................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
............................................................................................................................................................................................................................................................T-AT-----TAA---CTATGTTGATTCTT--GAG------A-TCCT...............................................................................................................................................................................................................................2811.001010000
................................................................................G-TCCCG-----------------------------------------------ATTCGAAGAA-C-TTTTGTTG--............................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................................................................................................................................................TACCCGTTTACCCCTAG-CCCTAAGA..........................................................................................................................................................................2511.001010000
droWil2
AACAAAT--GTTATGTTTTTAAGATGAATTAGCACAACAAACAAGAAGAACAAACAAAACAAATTCAGTTAA----ATTAT--TCAG------------------------------------------G----AACTTTTTAT-T-ATTTGTTA--AACTGCAATATTACAGAATGCCTTAT--TTCAAAAAAACAAAAACAAAACAAAAATCTA--ACTA---A-------------TGTATAT---GAAA-CGTAAAGAAACTAAAATGTTGAACGAATGAAA------AGTCTTG-AAATTTCT--CAATTTCTTAT-----AC--ATATTTCTATAGCACTTAAGTTTTTTGGAAATTATTTTGTGTATAAACTTTTGA-TTATTGATATTTTTGTTGT-------AGCATTCAGA----------------------------------AAA----TGA------------------------------GTGAAGGATACGAAAGA--GA--TCGSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGGATACGAAAGA--GA--TC.2113.00300300
.............................................................................................................................................................................................................................................................................................................................................................GTTTTTTGGAAATTATTTT.........................................................................................................................................................1912.00200020
............................................................................................................................................................................................................................................................................AATGTTGAACGAATGAAA------AGT..................................................................................................................................................................................................................................2111.00100100
.............................................................................................................................................................................................................................................................................ATGTTGAACGAATGAAA------A....................................................................................................................................................................................................................................1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................ATTGATATTTTTGTTGT-------AGCATT........................................................................................................2311.00100010
....................................................................................................................................................................................................................................................................................................................................................................................ATAAACTTTTGA-TTATTGAT................................................................................................................................2011.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CAGA----------------------------------AAA----TGA------------------------------GTGAAGGATAC...............2111.00100010
..............................................................................TAT--TCAG------------------------------------------G----AACTTTTTAT-T-ATTTGTT...............................................................................................................................................................................................................................................................................................................................................................................2611.00100001
...........................................................................................................................................................................................................................................................AA-CGTAAAGAAACTAAAAT..........................................................................................................................................................................................................................................................1911.00100010
.................................................................................................................................................................................................................................................................................................................................................................TTTGGAAATTATTTTGTGT.....................................................................................................................................................1911.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................ATTGATATTTTTGTTGT-------AGC...........................................................................................................2011.00110000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGTTGT-------AGCATTCAGA----------------------------------AAA----TGA------------------------------..........................2211.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGGATACGAAAGA--GA--TCG2211.00100010
........................................................................................................................................................................TACAGAATGCCTTAT--TTCAAAAAAACAA...................................................................................................................................................................................................................................................................................................................................2811.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGA----------------------------------AAA----TGA------------------------------GTGAAG....................1911.00110000
.............................................................................................................................................................................................................................................................................................................................................................GTTTTTTGGAAATTATTTTT........................................................................................................................................................2030.33100010
droVir3
TTTCGAT--TT-------------------------------------------------------AGCTCA----A-GTT--CCCGATCTGTCAGTTTTGTTGA--ACCAA-----------------T----TTTTTTTAAA-T-TTCAGTCC--AAATGCAATATTTATAAAGGCCTTAT--TTCAAG--------------------ACAGA--AATATCTAATTATTATTATTATTATTATTATTATTATG-----TAA---CTATGTTGAAC----------------TCTCTGACGTTTCTTTGAGTATC----------CAAGT-TT-----AG-CATTAAGTTTAA--------------TAT-----CATTTTA-TTATTGATATTTTTGTTGTAGTT----TCAGGCGAAT--ACACACACACAC---------------------ACA--CACACACA------------------CA-C---ATAGAA-------AAACATGA--AGASizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................TGAGTATC----------CAAGT-TT-----AG-CATT..............................................................................................................................................................................2112.002000001000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................TAAAGGCCTTAT--TTCAAG--------------------ACA...................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCGAAT--ACACACACACAC---------------------................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................G-----TAA---CTATGTTGAAC----------------TCTCTG.............................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTAGTT----TCAGGCGAAT--ACACACA..........................................................................................2811.001000000000000000000000000000000000010000000000000000000000000000
...........................................................................................GTCAGTTTTGTTGA--ACCAA-----------------T----TTT................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATTTTA-TTATTGATATTTTTG.........................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................T----TCAGGCGAAT--ACACACACAC.......................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TCTCTGACGTTTCTTTGAGTA..............................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................ACGTTTCTTTGAGTATC----------CAAG..............................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................................................................................................................TAA---CTATGTTGAAC----------------TCTCTGACG..........................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000010000000000000000
..............................................................................................................................................................................................................................................................................TGTTGAAC----------------TCTCTGACGTTTC......................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AAT--ACACACACACAC---------------------ACA--CACACACA------------------CA-..............................28200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
CTCCGAT--CT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT-----CAG---TTTTGTTGAATCT------------------------------GTGTTTCGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
No Reads
droGri2
CTCTGTT--TA----TTTTT----------------------------------------------AGCTAA----AGTCA--ACCGATCTGTCAGTTTTGTTAAAAACCTATGTACGAATATGTATAGA----ATGTTTGTATGATTTCAGTCT--AAACGCAATATTTATAAATGCCTTAT--TTGAAGAC---CGAGACC-GACTAAAGTTTAA-ACTAT---------------------------ATA-TG-----TAA---TTATGTTGAACTCT--CTA------AACG-TT------TATTTGAGT------------GTATAC-AATTTGTAG-CATTAAGTTT-A--------------TAT-----CATTTGA-TTATTGCTATTTCTGTTGTAGTT----TCAGGCAAAT--ACACACACACAC--ACACACAC--------------------ACACACAATTCG-----------------------------AAAACATGA--AGASizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads

Generated: 05/19/2015 at 01:32 PM