ID:

dsi_16688

 Coordinate:

2l:10713230-10713385 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TAAATGGTCAAAACAAGTGAAACGGCTAACAAAACCTGGCAACTTAATTGAAGAAGTGGTCGAGCGTAAAGTGTTAAAATAACTTTATAAACCCCATGATTTGTCTTTACCGCATATCTATCTCTTTCTGTTTTTTTTTTTTTTTCTTTATTTCACTGTATTTTACTACCACTATTTATTTCCTGCCTTCACTTCACTTGCAGCAGCCAGCAGAGCGAAAGAGATAGCCGCGGATCGCCAGAAAGAGAGGGCAAAT
**************************************************....((((((.....(((((((.........))))))).........(((.(((.......))).))).................................................)))))).........((((.............))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR902009
testis
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
.......TCAATACAAGTGAAACCGCGAA................................................................................................................................................................................................................................... 22 3 1 7.00 7 7 0 0 0 0 0 0 0 0
........CAATACAAGTGAAACCGCGAA................................................................................................................................................................................................................................... 21 3 2 3.50 7 7 0 0 0 0 0 0 0 0
.........AATACAAGTGAAACCGCGAA................................................................................................................................................................................................................................... 20 3 13 1.62 21 21 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CGAAAGAGATAGCCGCGGAT..................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................................................TATCTCTTTCTGTTTTTTCTGTT................................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................GAAAGAGATAGCCGCGGATC.................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......TCAATACAAGTGAAACCGCGA.................................................................................................................................................................................................................................... 21 3 4 0.75 3 3 0 0 0 0 0 0 0 0
........CAATACAAGTGAAACCGCGA.................................................................................................................................................................................................................................... 20 3 10 0.30 3 3 0 0 0 0 0 0 0 0
............ACAAGTGAAACCGCGAA................................................................................................................................................................................................................................... 17 2 20 0.30 6 6 0 0 0 0 0 0 0 0
...................................................AGAAGTGATCGAGCG.............................................................................................................................................................................................. 15 1 4 0.25 1 0 0 0 1 0 0 0 0 0
................................................................................................................................TGTGTTTTTTTTTTTTTCCTTAT......................................................................................................... 23 2 5 0.20 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................TTTTTTTTTTCTTGATTTAACT................................................................................................... 22 2 6 0.17 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GCGGAAGAGATAACCGCTGA...................... 20 3 7 0.14 1 0 0 0 0 0 1 0 0 0
............................................................................................................................................TCTTTGTTTATATCACTGTATT.............................................................................................. 22 3 7 0.14 1 0 0 0 0 0 0 1 0 0
................................................TGAAGAAGTGGTCCTGCG.............................................................................................................................................................................................. 18 2 9 0.11 1 0 0 0 0 0 0 0 1 0
................................................................................................................................TGTTCTTTTTTTTTTTTCTTTGTT........................................................................................................ 24 2 20 0.10 2 0 0 0 2 0 0 0 0 0
........................................................................................................................TCTCATTCTGTTCTTTTTTCTTT................................................................................................................. 23 3 11 0.09 1 0 0 0 0 0 0 0 0 1
................................................................................................................................TGTTTTATTTTTTCTTTCTTTATA........................................................................................................ 24 3 17 0.06 1 0 0 1 0 0 0 0 0 0
..........ATACAAGTGAAACTGCGAA................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................CGTTCTTTTTTTTTTTTTTTTTCTTT........................................................................................................... 26 2 20 0.05 1 0 0 0 1 0 0 0 0 0
...........TACAAGTGAAACCGCGAAC.................................................................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

ATTTACCAGTTTTGTTCACTTTGCCGATTGTTTTGGACCGTTGAATTAACTTCTTCACCAGCTCGCATTTCACAATTTTATTGAAATATTTGGGGTACTAAACAGAAATGGCGTATAGATAGAGAAAGACAAAAAAAAAAAAAAAGAAATAAAGTGACATAAAATGATGGTGATAAATAAAGGACGGAAGTGAAGTGAACGTCGTCGGTCGTCTCGCTTTCTCTATCGGCGCCTAGCGGTCTTTCTCTCCCGTTTA
**************************************************....((((((.....(((((((.........))))))).........(((.(((.......))).))).................................................)))))).........((((.............))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
..........................................................................................................................................................................................CAAGTGAAGTAAACGTCATCGGT............................................... 23 3 1 1.00 1 0 1 0 0 0
...................................................................................................................................................AATATAGTGACATACAATGATGT...................................................................................... 23 3 1 1.00 1 1 0 0 0 0
..................................................................................................................................AAAAAAAAAAAAAAAGAA............................................................................................................ 18 0 20 0.15 3 0 0 3 0 0
.............................................................................................................................AAGACAATACAAAAAAAAAAGAA............................................................................................................ 23 2 7 0.14 1 0 0 1 0 0
.......................................................................................................................TTGAGAAAGACACAAAAAAAA.................................................................................................................... 21 2 8 0.13 1 0 0 1 0 0
.................................TGGACCGTTGAACCAACT............................................................................................................................................................................................................. 18 2 9 0.11 1 0 0 0 0 1
..................................................................................................................................AAAAAAAAAAAAAAAGAAACAAAGAGGC.................................................................................................. 28 3 9 0.11 1 0 0 0 1 0
........................................................................................................................................................AGTGACATACAATGA......................................................................................... 15 1 10 0.10 1 1 0 0 0 0
......................................................................................................................ATAAAGAAAGACAAAAAAA....................................................................................................................... 19 1 11 0.09 1 0 0 1 0 0
....................................................................................................................................TAAAAAAAAAAAGGCAATAAAGT..................................................................................................... 23 3 13 0.08 1 0 0 0 1 0
.........TTATGTTCACTTTGGCGCTT................................................................................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 1 0
..................................................................................................................................AAAAAAAAAAAAAAAGAAA........................................................................................................... 19 0 20 0.05 1 0 0 1 0 0
...................................................................................................................................AAAAAAAAAAAAAAGAAA........................................................................................................... 18 0 20 0.05 1 0 0 1 0 0
............................................................................................................................AAAGACAAAAAAAAAAAAAAA............................................................................................................... 21 0 20 0.05 1 0 0 1 0 0
..........................................................................................................................AGAAAGACTGAAAAAAAACAAAA............................................................................................................... 23 3 20 0.05 1 0 1 0 0 0
...................................................................................................................................AAAAAAAAAAAAAAGAA............................................................................................................ 17 0 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:10713180-10713435 - dsi_16688 T--AAATGGTCAAA---ACAA-------GTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCC-ATGATTTGTCTT-----------------------TA-CCGCATAT------------------CTATCTCTTTCTGTT---TT----------------------TTTTTTTTTTTCTTTATTTCAC-----TGTATTTTACTA-CCACTA--------------------TTTATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCGAAAGAGATAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGCA--AAT
droSec2 scaffold_3:6456665-6456915 - T--AAATGGTCAAA---ACAA-------GTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCC-ATGATTTGTCTT-----------------------TA-CCGCATAT------------------CTATCTTTTTCTGTT---TT----------------------TTTT-----TTCTTTATTTCAC-----TGTATTTTACTA-CCACTA--------------------TTTATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCGAAAGAGATAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGCA--AAT
dm3 chr2L:11055427-11055677 - T--AAATGGTCAAA---ACAA-------GTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCCAATGATTTGTCTT-----------------------TA-CCGCATAT------------------CTATCTCTTTCTGTT---TT----------------------TTT------CTCTTTATTTCAC-----TGTATTTTACTA-CCACTA--------------------TTTATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCGAAAGAGACAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGCA--AAT
droEre2 scaffold_4929:14389579-14389821 + T--AAATGGTCAAA---ACAA-------GTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCC-ATGATTTGTCTT-----------------------TA-CCGCATAT------------------CTATCTCTTTCTGTT---TT----------------------TTT----------TCA--------TTTTGTATTTTACTA-CCACTA--------------------TTTATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCGACAGAGACAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGCA--AAT
droYak3 2L:7449836-7450087 - T--AAATGGTCAAA---ACAA-------GTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCC-ATGATTTGTCTT-----------------------TA-CCGCATTT------------------CTATCTCTTTCTGCT---TTTTTCTTTAT--------------------------TTTGTTGTA-----TGTATTTTACTA-CCACTA--------------------TTTATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCGAAAGAGACAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGCA--AAT
droEug1 scf7180000407253:489463-489730 - T--AAATGGTCAAA---ACAA-------CTGAAA-CGGCCAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAGCTCC-ATGATTTGTCC-------------------------------ATCT--CTCT----------CTCTATCTCTTTCTCTT---TC----------------------TCC------CTCTCTATTTCTCTATTTAGTATTTTGC---CCACAA--------------------TTTATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG---CAGGCA-AGCCAGTCAACAGAGCGAAAGAGATAGCC--------------G----GAGATCGCCA-----G-------------------AAAGAGAG---------------------GCCA--AAT
droBia1 scf7180000302422:2048037-2048261 + T--AAATGGTCAAA---ACAA-------CTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCC-ATGATTTGTCTT-----------------------TA-CCGCATGT------------------CTATCTGT----G------------------------------------------------------TTTGCATTTTGC---CCACTA--------------------TATATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CCGTGCGAAAGAGACGG-A--------------G----CGGACCGCCA-----G-------------------AGAGAGAG---------------------GGCA--AAT
droTak1 scf7180000414023:131206-131433 - T--AAATGGTCAAA---ACAA-------CTGAAA-CGGGTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAATCCC-ATGATTTGTCTT-----------------------TA-CCGCATGT------------------CTATTTCTTT--------------------------------------------------------TTTTGTATTTTGC---CCACTA--------------------TATATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCGAAAGAAACAAAA--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GCCA--AAT
droEle1 scf7180000490644:470233-470465 + T--AAATGGTCAAA---ACAA-------CTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCAAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCC-ATGATTTGTCTT-----------------------TG-CCGCATGT------------------CTCTCTCC----GC----------------------------------------------------TTTCGTATTTTAC---CCACTA--------------------TTTATTTCC--TGCCTTCACTT-----CGATTCACTTGCAG----------------CAGCCAG--------------------CAGTGCGAAAGAGATACCC--------------G----CCGATCGCCA-----G-------------------AAAGAGAG---------------------GGCA--AAT
droRho1 scf7180000767385:1-84 - T--AAATGGTCAAA---ACAA-------CTGAAA-CGGCTAACAAAACC---------------------------------TGGT------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454111:534466-534715 - T--AAATGGTCAAA---ACAA-------CTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAGCCCC-ATGATTTGTCTT-----------------------TA-CCGCATATCTCTCT----------CTCTATTTATTTCTACT---TT----------------------TTT---------------T-----TTTTGTATTTTAC---CCACTA--------------------TTTATTTCC--TGCCTTCACTA-------TTTCACTTGCAG----------------CAGCCAC--------------------AAGTGGAAGAGAGATAGCC--------------A----CGGATCGCCA-----G-------------------ACAGAGAG---------------------GGCA--AAT
droKik1 scf7180000302677:274354-274611 - T--AAATGGTCAAG---ACAA-------CTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TCTATAAGCCCC-ATGATTTGTCTT-----------------------GG-CCGCAAGT------------------CTCTC--TTTCTCTT---T--------------------------------CTCTCTA---------TTCGTATTTTGC---CCACTACAGTATTTATTTATTTATTTTTTATTTCC--TGCCTTCACT----------TTACTTGCAG----------------CAGCCAG--------------------CAGTGTGACAGGAACAGCC--------------G----CGGATCGCCA-----C-------------------ACAGAGAG---------------------GGCA--AAT
droAna3 scaffold_12916:12182397-12182598 - T--AAACGGTCAGA---GCTG-------CTGGAA-GA---------------------------------------------------------------GGAGGA------------GGTGGTCGAGCGTA---------------------------------------------------------------------------------------GCGCTAAAATAGC----TTCATCCAACTC-ATGATTTGTCTCT---CA-----------------AG-CCGTGTT---GCCTTC----------CTGGCTATTTCAGTT---TT----------------------CTT------G--------CCAC-----TTTATGTTACT---TACTT--------------------ACCACTTCC--TGCCTTC---------------ACTTGCAGATACCC----------CAGCCAG--------------------C----------------CA--------------G----CTTATCGCCA-----G-------------------CGGGAGGA---------------------GG-------
droBip1 scf7180000396769:526159-526351 - T--AAATGGCCA------------------------GGCCAACAATTGC---------------------------------TGAC------AGC-TAATGGAAGA------------GGTAGTCGAGCGTA---------------------------------------------------------------------------------------GTGCTGGAATAGC----TTCACACAACTC-ATGATTTGTCTT-----------------------CC-TAG---------------------------CTAT-------------------------------------------------------------TTTATTTTAC---TCACCA--------------------TTTGTTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCCCGAGAGATACCA--------------G----CTTATCGCCA-----G-------------------AAGGAGGA---------------------GG-------
dp5 4_group3:6393170-6393480 - T--AAATGGCCAAAAACACAA-------CTGAAAATTGCTTGCAAAAGCTCTCTGGCTTTGGCCTGGCTCGGACTGTGACTGTGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA--------------------------------------------------------------------A----------------AGTGTTAAAATAAC----TTTATAAGACTC-ATGATTTGTCCATGCTCTACCC------------------------------TCTCGCCCCCCTCTAACCAC-------------------------------------------------------------------TCACTACTTACTA--------------------CTTATTTCCTCTGCCTTCACTTTTCCTTCTCTCACTTGCAG----------------AGGCCACTTGTAG-CC-CGCCCCACGAAAGAGCGAAAGAGACACAC--------------ACACACACACCGCCTGGAAAGAGCA---------------AAAGAGAG---------------------AGCA--G--
droPer2 scaffold_1:7883480-7883792 - T--AAATGGCCAAAAACACAA-------CTGAAAATTGCTTGCAAAAGCTCTCCGGCTTTGGCCTGGCTCGGACTGTGGCTCTGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA--------------------------------------------------------------------A----------------AGTGTTAAAATAAC----TTTATAAGACTC-ATGATTTGTCCATGCTCTACCC------------------------------TCTCGCCCCCCTCTAACCAC-------------------------------------------------------------------TCACTACTTACTA--------------------CTTATTTCCTCTGCCTTCACTTTTCCTTCTCTCACTTGCAG----------------AGGCCACTCGTAG-CC-CGCCCCACGACAGAGCGAAAGAGACACAC--------------AC--ACACACCGTCTGGAAAGAGCA---------------AAAGAGAG---------------------AGCAGCAGC
droWil2 scf2_1100000004643:36184-36330 + T--AAATGGACAAA---ACAACAAACGACTAAAA-TGGCTTACAAAACT---------------------------------TACC------AACTTAATTGAAGAGACTGAAAGAGAAGAAATATGGCGAAA--------------------------------------------------------------------T----------------AGTGTTAAAAAAATAAAGTTTATAAAC-TC-ATGATTTGTCTA-----------------------TT-TCACTTTT------------------CTTTTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:7992285-7992622 + TGAAAATGGCCAA-----------------------------CA--ACC---------------------------------TGTTGGCAC-GGCATAATTGAAAA------------ATTGGCCAAGAAACAAAACAAATGAGCGGTGTGTCGCCGGGCGAGGGGCAGGGGGAGACGAAATGCCGCAATGATAACTGCAAAATGAAGCAAAGAAAACTTTATTCAAATAAC----TTAATAAT----------TTAATCT-----------------------GCAGT-TAAAG------------------CCAACTCTTGCTAACGCTTT-TCCTATAT--------------------------TTTCTTCTC-----TGCA------------CTT--------------------TTCGTTTTC--TTTGTTT---------------ATTTCCGGACCCGGCAGGCTGCACCAGCAGG-------CGGAGC---------GAGCCAAAGAGAGAGAG---------------------------------AGAGCG-------------AGAGAGAGAGAGAAGGAGAGCGCGCGGCGGCGACA--AAT
droMoj3 scaffold_6500:620003-620252 + G--CAACAACAAAG---ACAA-------ACA---------------ACC---------------------------------TGTTGCCTCGAACATAATTGAAAA------------ATTGGCCAAGCAAAAAAAGAAGGAA-----------------------------------------AAAACTTATAACTAAA-T----------------A-------------------AAAAGAAATG-AAAACTTGTTAAAGTTAAGCTTAATAACTGTAGTCCG-AC-TATTG------------------CTAGCTCTGTCATACGCATT-TCCTATAGCCTTTTCAATGCTTTTT---------------------------------------------------------------TT----TT--CTCTTTCATTT-----CATTCCATTTCCGG----------------AA--------------------CA---------GGAGGAAATCAAA--------------T----CGAATCGAC--------------------------------------------------------GCG--AAT
droGri2 scaffold_15252:11062315-11062498 + A--AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTCAAATAAC----TTAATAAC----------TGAAGTC-----------------------CA-CTTATTTT------------------CTAGCTCTTTCTAAT---GT----------------------TTTT-----T--------CCTC-----TTTT-----------------------------------------------TCTTTCGTTTTTCTTTTGTTTACTTCCGGATACGC----------AA--------------------CA---------GG----AGCGG-GGCAGCGAGACACCAACAACACCACCACC-ACCAACAACAACAACAATAGCAA--CAATAAGA---------------------AACA--AAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
T--AAATGGTCAAA---ACAA-------GTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCC-ATGATTTGTCTT-----------------------TA-CCGCATAT------------------CTATCTCTTTCTGTT---TT----------------------TTTTTTTTTTTCTTTATTTCAC-----TGTATTTTACTA-CCACTA--------------------TTTATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCGAAAGAGATAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGCA--AATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGAGATAGCC--------------G----CGGAT....................................................................2011.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAGATAGCC--------------G----CGGATC...................................................................2011.00101000000000000000
droSec2
T--AAATGGTCAAA---ACAA-------GTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCC-ATGATTTGTCTT-----------------------TA-CCGCATAT------------------CTATCTTTTTCTGTT---TT----------------------TTTT-----TTCTTTATTTCAC-----TGTATTTTACTA-CCACTA--------------------TTTATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCGAAAGAGATAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGCA--AATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------.........2711.0010100
.............................................................................................ACTTAATTGAAGA------------AGTGGTCGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAG--------------------CAGAGCGAAAGAG..................................................................................................1911.0010100
dm3
T--AAATGGTCAAA---ACAA-------GTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCCAATGATTTGTCTT-----------------------TA-CCGCATAT------------------CTATCTCTTTCTGTT---TT----------------------TTT------CTCTTTATTTCAC-----TGTATTTTACTA-CCACTA--------------------TTTATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCGAAAGAGACAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGCA--AATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGA...............................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGA...............................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAG--------------------CAGAGCGAAAGAGACAGCC--------------G----C........................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GG.......2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGC......2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCC--------------G----CGGATCGCCA-----G-------------------AAAGAGA...............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG----------------CAGCCAG--------------------CAGAGCGAAAG....................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--------------G----CGGATCGCCA-----G-------------------AAAGAG................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------A........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAAAGAGACAGCC--------------G----CGGATCGC.................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGA...............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAAGAGACAGCC--------------G----CGGAT....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------------CAGCCAG--------------------CAGAGCGAAAGAG..................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TGTCTT-----------------------TA-CCGCATAT------------------CTATCTCTT......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAG--------------------CAGAGCGAAAGAGAC................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGC......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAG................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGG...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGCCA-----G-------------------AAAGAGAG---------------------GGC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACAGCC--------------G----CGGATCGCCA-----G-------------------A.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGA...............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGACAGCC--------------G----CGGATCGCCA-----..........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCC--------------G----CGGATCGCCA-----G-------------------A.....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAGACAGCC--------------G----CGGATC...................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACAGCC--------------G----CGGATCGCCA-----G-------------------AA....................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AAGA------------AGTGGTCGAGCGTTT-------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------G........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCC--------------G----CGGATCGCCA-----G-------------------A.....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AATGGTCAAA---ACAA-------GTGAAA-CGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACAGCC--------------G----CGGATCGC.................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCC--------------G----CGGATCGCCA-----G-------------------AAAGA.................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACAGCC--------------G----CGGATCGCCA-----G-------------------AAAG..................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------G----CGGATCGCCA-----G-------------------AAAGAGA...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------G........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCC--------------G----CGGATCGCCA-----G-------------------AA....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCC--------------G----CGGATCGCCA-----G-------------------AAAG..................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
T--AAATGGTCAAA---ACAA-------GTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCC-ATGATTTGTCTT-----------------------TA-CCGCATAT------------------CTATCTCTTTCTGTT---TT----------------------TTT----------TCA--------TTTTGTATTTTACTA-CCACTA--------------------TTTATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCGACAGAGACAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGCA--AATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................ATTGAAGA------------AGTGGTCGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGCC--------------G----CGGATCGCCA-----G-------------------AAA...................................2211.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------.........2411.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------CAGCCAG--------------------CAGAGCGACAGAGACAGCC--------------..............................................................................2711.0010000010
droYak3
T--AAATGGTCAAA---ACAA-------GTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCC-ATGATTTGTCTT-----------------------TA-CCGCATTT------------------CTATCTCTTTCTGCT---TTTTTCTTTAT--------------------------TTTGTTGTA-----TGTATTTTACTA-CCACTA--------------------TTTATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCGAAAGAGACAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGCA--AATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................ACTTAATTGAAGA------------AGTGGTCGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCC--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGCA--...2911.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCCA-----G-------------------AAAGAGAG---------------------GGC......1911.00110000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GGC......2411.00110000000000
........................................................................................................GA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AG............................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------CAGAGCGAAAGAGACAGCC--------------G----CG.......................................................................2311.00100000010000
droEug1
T--AAATGGTCAAA---ACAA-------CTGAAA-CGGCCAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAGCTCC-ATGATTTGTCC-------------------------------ATCT--CTCT----------CTCTATCTCTTTCTCTT---TC----------------------TCC------CTCTCTATTTCTCTATTTAGTATTTTGC---CCACAA--------------------TTTATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG---CAGGCA-AGCCAGTCAACAGAGCGAAAGAGATAGCC--------------G----GAGATCGCCA-----G-------------------AAAGAGAG---------------------GCCA--AATSizeHit CountTotal NormTotal
No Reads
droBia1
T--AAATGGTCAAA---ACAA-------CTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCC-ATGATTTGTCTT-----------------------TA-CCGCATGT------------------CTATCTGT----G------------------------------------------------------TTTGCATTTTGC---CCACTA--------------------TATATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CCGTGCGAAAGAGACGG-A--------------G----CGGACCGCCA-----G-------------------AGAGAGAG---------------------GGCA--AATSizeHit CountTotal NormTotal
No Reads
droTak1
T--AAATGGTCAAA---ACAA-------CTGAAA-CGGGTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAATCCC-ATGATTTGTCTT-----------------------TA-CCGCATGT------------------CTATTTCTTT--------------------------------------------------------TTTTGTATTTTGC---CCACTA--------------------TATATTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCGAAAGAAACAAAA--------------G----CGGATCGCCA-----G-------------------AAAGAGAG---------------------GCCA--AATSizeHit CountTotal NormTotal
No Reads
droEle1
T--AAATGGTCAAA---ACAA-------CTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCAAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAACCCC-ATGATTTGTCTT-----------------------TG-CCGCATGT------------------CTCTCTCC----GC----------------------------------------------------TTTCGTATTTTAC---CCACTA--------------------TTTATTTCC--TGCCTTCACTT-----CGATTCACTTGCAG----------------CAGCCAG--------------------CAGTGCGAAAGAGATACCC--------------G----CCGATCGCCA-----G-------------------AAAGAGAG---------------------GGCA--AATSizeHit CountTotal NormTotal
No Reads
droRho1
T--AAATGGTCAAA---ACAA-------CTGAAA-CGGCTAACAAAACC---------------------------------TGGT------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
T--AAATGGTCAAA---ACAA-------CTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TTTATAAGCCCC-ATGATTTGTCTT-----------------------TA-CCGCATATCTCTCT----------CTCTATTTATTTCTACT---TT----------------------TTT---------------T-----TTTTGTATTTTAC---CCACTA--------------------TTTATTTCC--TGCCTTCACTA-------TTTCACTTGCAG----------------CAGCCAC--------------------AAGTGGAAGAGAGATAGCC--------------A----CGGATCGCCA-----G-------------------ACAGAGAG---------------------GGCA--AATSizeHit CountTotal NormTotal
No Reads
droKik1
T--AAATGGTCAAG---ACAA-------CTGAAA-CGGCTAACAAAACC---------------------------------TGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA-------------------------------------------------------------------------------------AGTGTTAAAATAAC----TCTATAAGCCCC-ATGATTTGTCTT-----------------------GG-CCGCAAGT------------------CTCTC--TTTCTCTT---T--------------------------------CTCTCTA---------TTCGTATTTTGC---CCACTACAGTATTTATTTATTTATTTTTTATTTCC--TGCCTTCACT----------TTACTTGCAG----------------CAGCCAG--------------------CAGTGTGACAGGAACAGCC--------------G----CGGATCGCCA-----C-------------------ACAGAGAG---------------------GGCA--AATSizeHit CountTotal NormTotal
No Reads
droAna3
T--AAACGGTCAGA---GCTG-------CTGGAA-GA---------------------------------------------------------------GGAGGA------------GGTGGTCGAGCGTA---------------------------------------------------------------------------------------GCGCTAAAATAGC----TTCATCCAACTC-ATGATTTGTCTCT---CA-----------------AG-CCGTGTT---GCCTTC----------CTGGCTATTTCAGTT---TT----------------------CTT------G--------CCAC-----TTTATGTTACT---TACTT--------------------ACCACTTCC--TGCCTTC---------------ACTTGCAGATACCC----------CAGCCAG--------------------C----------------CA--------------G----CTTATCGCCA-----G-------------------CGGGAGGA---------------------GG-------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG--------------------C----------------CA--------------G----CTTATCGCCA-----G-------------------CGGGA.................................2311.001100000
droBip1
T--AAATGGCCA------------------------GGCCAACAATTGC---------------------------------TGAC------AGC-TAATGGAAGA------------GGTAGTCGAGCGTA---------------------------------------------------------------------------------------GTGCTGGAATAGC----TTCACACAACTC-ATGATTTGTCTT-----------------------CC-TAG---------------------------CTAT-------------------------------------------------------------TTTATTTTAC---TCACCA--------------------TTTGTTTCC--TGCCTTCACT----------TCACTTGCAG----------------CAGCCAG--------------------CAGAGCCCGAGAGATACCA--------------G----CTTATCGCCA-----G-------------------AAGGAGGA---------------------GG-------SizeHit CountTotal NormTotal
No Reads
dp5
T--AAATGGCCAAAAACACAA-------CTGAAAATTGCTTGCAAAAGCTCTCTGGCTTTGGCCTGGCTCGGACTGTGACTGTGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA--------------------------------------------------------------------A----------------AGTGTTAAAATAAC----TTTATAAGACTC-ATGATTTGTCCATGCTCTACCC------------------------------TCTCGCCCCCCTCTAACCAC-------------------------------------------------------------------TCACTACTTACTA--------------------CTTATTTCCTCTGCCTTCACTTTTCCTTCTCTCACTTGCAG----------------AGGCCACTTGTAG-CC-CGCCCCACGAAAGAGCGAAAGAGACACAC--------------ACACACACACCGCCTGGAAAGAGCA---------------AAAGAGAG---------------------AGCA--G--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................ATAAGACTC-ATGATTTGTC.....................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAG-CC-CGCCCCACGAAAGAGCG........................................................................................................2311.0010100000000
.........................................................................................................................................................................................................................................................................CTACCC------------------------------TCTCGCCCCCCTCTAAC..........................................................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
T--AAATGGCCAAAAACACAA-------CTGAAAATTGCTTGCAAAAGCTCTCCGGCTTTGGCCTGGCTCGGACTGTGGCTCTGGC------AACTTAATTGAAGA------------AGTGGTCGAGCGTAA--------------------------------------------------------------------A----------------AGTGTTAAAATAAC----TTTATAAGACTC-ATGATTTGTCCATGCTCTACCC------------------------------TCTCGCCCCCCTCTAACCAC-------------------------------------------------------------------TCACTACTTACTA--------------------CTTATTTCCTCTGCCTTCACTTTTCCTTCTCTCACTTGCAG----------------AGGCCACTCGTAG-CC-CGCCCCACGACAGAGCGAAAGAGACACAC--------------AC--ACACACCGTCTGGAAAGAGCA---------------AAAGAGAG---------------------AGCAGCAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC--ACACACCGTCTGGAAA..........................................................1812.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC--------------AC--ACACACCGTCTGGAAAGAGC......................................................2412.002200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGCGAAAGAGACACAC--------------AC--AC........................................................................2311.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAG-CC-CGCCCCACGACAGAGCG........................................................................................................2311.001010000
droWil2
T--AAATGGACAAA---ACAACAAACGACTAAAA-TGGCTTACAAAACT---------------------------------TACC------AACTTAATTGAAGAGACTGAAAGAGAAGAAATATGGCGAAA--------------------------------------------------------------------T----------------AGTGTTAAAAAAATAAAGTTTATAAAC-TC-ATGATTTGTCTA-----------------------TT-TCACTTTT------------------CTTTTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TGAAAATGGCCAA-----------------------------CA--ACC---------------------------------TGTTGGCAC-GGCATAATTGAAAA------------ATTGGCCAAGAAACAAAACAAATGAGCGGTGTGTCGCCGGGCGAGGGGCAGGGGGAGACGAAATGCCGCAATGATAACTGCAAAATGAAGCAAAGAAAACTTTATTCAAATAAC----TTAATAAT----------TTAATCT-----------------------GCAGT-TAAAG------------------CCAACTCTTGCTAACGCTTT-TCCTATAT--------------------------TTTCTTCTC-----TGCA------------CTT--------------------TTCGTTTTC--TTTGTTT---------------ATTTCCGGACCCGGCAGGCTGCACCAGCAGG-------CGGAGC---------GAGCCAAAGAGAGAGAG---------------------------------AGAGCG-------------AGAGAGAGAGAGAAGGAGAGCGCGCGGCGGCGACA--AATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCAGCAGG-------CGGAGC---------GAGC.........................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGACCCGGCAGGCTGCACCAGCAGG-------C...........................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCACCAGCAGG-------CGGAGC---------GAGC.........................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TC-----TGCA------------CTT--------------------TTCGTTTTC--TTTGTTT---------------ATC...............................................................................................................................................................2811.001000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCCGGACCCGGCAGGC...............................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAGAGAG---------------------------------AGAGCG-------------AGA.....................................19200.051000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAG---------------------------------AGAGCG-------------AGAGAGA.................................18200.051000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCG-------------AGAGAGAGAGAGAA..........................18200.051000000100000000000000000000000000000000000000000000000000000000
droMoj3
G--CAACAACAAAG---ACAA-------ACA---------------ACC---------------------------------TGTTGCCTCGAACATAATTGAAAA------------ATTGGCCAAGCAAAAAAAGAAGGAA-----------------------------------------AAAACTTATAACTAAA-T----------------A-------------------AAAAGAAATG-AAAACTTGTTAAAGTTAAGCTTAATAACTGTAGTCCG-AC-TATTG------------------CTAGCTCTGTCATACGCATT-TCCTATAGCCTTTTCAATGCTTTTT---------------------------------------------------------------TT----TT--CTCTTTCATTT-----CATTCCATTTCCGG----------------AA--------------------CA---------GGAGGAAATCAAA--------------T----CGAATCGAC--------------------------------------------------------GCG--AATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
A--AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTCAAATAAC----TTAATAAC----------TGAAGTC-----------------------CA-CTTATTTT------------------CTAGCTCTTTCTAAT---GT----------------------TTTT-----T--------CCTC-----TTTT-----------------------------------------------TCTTTCGTTTTTCTTTTGTTTACTTCCGGATACGC----------AA--------------------CA---------GG----AGCGG-GGCAGCGAGACACCAACAACACCACCACC-ACCAACAACAACAACAATAGCAA--CAATAAGA---------------------AACA--AATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCACCACC-ACCAACA........................................................1980.13110

Generated: 05/19/2015 at 11:26 AM