ID:

dsi_1666

 Coordinate:

2r:14983262-14983411 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.0 -14.0 -14.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GATCTAAGATTCAAGGGCTTGCTGCATTCGTTTATACAACTATCAATCTAAGTGTACGTTTAAAGACTAAACCACATTGGATGGTCCACCCGATGTCATTCCCAAATGTTTCTAATACTTAGTAAAAAAAAACTTTAGAAAATCCAGCATTGCGGTTAAAGTGAATATACATTTGTTTTACGCTTTTATTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCTAATCCGTTGAAAAGCCAA
*******************************************************************......(((((((.((...)).)))))))......(((((((((((((.....(((........))))))))))......((((........))))......))))))*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 M025
embryo
 M024
male body		 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M023
head
..TCTAAGATTCAAGGGCTTGCTGCATT.............................................................................................................................................................................................................................. 26 0 1 15.00 15 6 7 0 0 1 0 1 0 0 0 0
..TCTAAGATTCAAGGGCTTGCTGCAT............................................................................................................................................................................................................................... 25 0 1 13.00 13 5 7 0 0 0 0 1 0 0 0 0
....TAAGATTCAAGGGCTTGCTGCATT.............................................................................................................................................................................................................................. 24 0 1 10.00 10 0 4 0 1 2 0 2 0 1 0 0
..............................................................................................................................................TCAAGCATTGCGGTTAAAGTGAATATA................................................................................. 27 1 1 7.00 7 3 1 2 0 0 0 0 0 0 1 0
..........................................................................................................................TAAAAAAAAACTTTAGAAAATCAAGCAT.................................................................................................... 28 1 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0
...................................................................TAAACCACATTGGATGGTCCACCCGA............................................................................................................................................................. 26 0 1 4.00 4 1 1 0 0 0 0 0 0 2 0 0
..........................................................................................................................TAAAAAAAAACTTTAGAAAATCAAGCA..................................................................................................... 27 1 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0
...CTAAGATTCAAGGGCTTGCT................................................................................................................................................................................................................................... 20 0 1 3.00 3 0 0 0 0 2 1 0 0 0 0 0
..............................................................................................................................................TCAAGCATTGCGGTTAAAGTGAATA................................................................................... 25 1 1 3.00 3 0 2 0 0 0 0 1 0 0 0 0
..............................................................................................................................AAAAAACTTTAGAAAATCAAGCATTGC................................................................................................. 27 1 1 3.00 3 0 0 0 0 0 0 0 0 0 3 0
......................................................TACATTTAAAGACTAAACCACATTGGA......................................................................................................................................................................... 27 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................ACTTTAGAAAATCAAGCATTGCGGT.............................................................................................. 25 1 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0
...............................................CTAAGTGTACGTTTAAAGACT...................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 0 1 0 0 1 0 0 0
............................................................TAAAGACTAAACCACATTGGATGGT..................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AGATGGCGTTCCCTAATCCGTTGAAA...... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTTTATTTCTTCTCTAGGCGTTGAGT......................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................AACTTTAGAAAATCAAGCATTGCGGT.............................................................................................. 26 1 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................AGAAAATCAAGCATTGCGGTTAAAGTGAA..................................................................................... 29 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TTTCTTCTCTAGGCGTTGAGTTCCGT.................................... 26 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TCCGTGGTTAGATGGCGTTCCCTAA................ 25 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
.............................................ATCTATGTGTACGTTTAAAGACT...................................................................................................................................................................................... 23 1 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0
...CTAAGATTCAAGGGCTTGCTGCATT.............................................................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..TCGAAGATTCAAGGGCTTGCTGCATT.............................................................................................................................................................................................................................. 26 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
...........................................................................................................................TAAAAAAAACTTTAGAAAATCAAGCA..................................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................ATTGCGGTTAAAGTGAATATACATTTG........................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........TCAAGGGCTTGCTGCATTCGTTTTTATAAC.................................................................................................................................................................................................................. 30 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................AGCATTGCGGTTAAAGTGAAA.................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....TAAGATTCAAGGGCTTGCTGCATTCGTT.......................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........TTCAAGGGCTTGCTGCATTCGTTTTTA...................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TACTTAGTAAAAAAAAACTTTAGAAAA............................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CTAGGCGTTGAGTTCCGTG................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
....TAAGATTCAAGGGCTTGCTGCATTC............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CTTTTATTTCTTCTCTAGGC................................................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................CTTGCTGCATTCGTTTATACAACTATC.............................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................TTATTTCTTCTCTAGGCGTTGAG.......................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TAGGCGTTGAGTTCCGTGGTTAGATGGCG........................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................AAGTGTACGTTTAAAGACT...................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................GGTCCACCCGATGTCATT...................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TTCTCTAGGCGTTGAGTTCCGTGGT................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........TCAAGGGCTTGCTGCATTCGTTTAT....................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..TCTAAGATTCAAGGGCTTGCTGC................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..TCTAAGATTCAAGGGCTTGCT................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................ATTGCGGTTAAAGTGAATATACATTTGTT......................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..TCTAAGATTCAAGGGCTTGCTGCATC.............................................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
............................................................TAAAGACTAAACCACATTGGA......................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................AAAAAACTTTAGAAAA............................................................................................................ 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................................CTGAGTGTACGTTTAAAGACT...................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
...............................................CTAAGTGTACGTTTAAAGACG...................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.ATCTAAGATTCAAGGGCTTGCT................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................TTAGATGGCGTTCCCTAATCCGTTGA........ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CTAGGCGTTGAGTTCCGTGGTTAGATG........................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................TTTAGAAAATCCAGCATTGCGGTTAAAG......................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................TTAGAAAATCAAGCATTGCGGTTAAAGTGAA..................................................................................... 31 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GTTCCCTAATCCGTTGAAAAGC... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................TTTATTTCTTCTCTAGGCGTTGAGT......................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TGAGTTCCGTGGTTAGATGGCGTT...................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................AAATCCAGCATTGCGGTTAAAGTGA...................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................TCTCTAGGCGTTGAGTTCCGTGGTTA............................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................TTTAAAGACTAAACCACATTGGATGGTC.................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................ATGTCATTCCCAAATGTTT........................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................TAGGCGTTGAGTTCCGTGGTTAGATGGCGTT...................... 31 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.ATCGAAGATTCAAGGGCTTGCTGCATT.............................................................................................................................................................................................................................. 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TCTTCTCTAGGCGTTGAGTTCCGTGGTT................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CGTTCCGTAAGCCGTTGAA....... 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTGCGGTTAAAGTGAATATACATT............................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................TAAAAAAAAACTTTAGAAAATCAAGCT..................................................................................................... 27 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................AAATCAAGCATTGCGGTTAAAGTGAA..................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TCAAGCATTGCGGTTAAAGTGAATATACA............................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................AAAAACTTTAGAAAATCAAGCATTGCGGT.............................................................................................. 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................TTAAAGACTAAACCACATTGGATG....................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................ACTTTAGAAAATCCAGCATTGAGGC.............................................................................................. 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..TCTAAGATTCAAGGGCTTGCTGCA................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................AAACTTTAGAAAATCAAGCATTGCGGT.............................................................................................. 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................AAAACTTTAGAAAATCAAGCATTGCGGT.............................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................AAGCATTGCGGTTAAAGTGA...................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ATCCAGCATTGCGGTTAAAG......................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................TAGAAAATCAAGCATTGCGGTTAAAGT........................................................................................ 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTTAGAAAATCAAGCATTGCGGTTAAAG......................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CGTTCCGTAATCCGGTGAA....... 19 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................AAAAACTTTAGAAAATCAAGCATTGCG................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.ATCTAAGATTCAAGGGCTTGCTGCAT............................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTTAGAAAATCCAGCATTGCGGTT............................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.........TTCAAGGGCTTGCTGCATTCGTTTA........................................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................TAAAGACTAAACCACATTGGATGGTC.................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................AAAAAACTTTAGAAAATCAAGCATTGCGGT.............................................................................................. 30 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................TGCTGCATTCGTTTATACAACTATCAA............................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.ATCTAAGATTCAAGGGCTTGCTGCATT.............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGCGTTCCGTAAGCCGTTGAA....... 21 3 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GCGTTCCGTAAGCCGTTGAG....... 20 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TGTCTAGGCGTTGAGT......................................... 16 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CGTTCCGTAAGCCGTTGA........ 18 2 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................CTACTCTAGGCGTTG............................................ 15 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0
......................................................................................CACCCGATCTCATTCCGAAC................................................................................................................................................ 20 3 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................GTTCCTTAAGCCGTTGAA....... 18 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................AAAAAAAAACTTTAGACACACC......................................................................................................... 22 3 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................CTACTCTAGGCGTGGA........................................... 16 2 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0
................................................TAATTGTACGTTTAAA.......................................................................................................................................................................................... 16 1 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................TAGTACTTAGAAAAAAAAAA...................................................................................................................... 20 2 18 0.06 1 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................TAGTACTTAGAAAAAAAAA....................................................................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................AGTACCGCGGTTAGA............................. 15 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

CTAGATTCTAAGTTCCCGAACGACGTAAGCAAATATGTTGATAGTTAGATTCACATGCAAATTTCTGATTTGGTGTAACCTACCAGGTGGGCTACAGTAAGGGTTTACAAAGATTATGAATCATTTTTTTTTGAAATCTTTTAGGTCGTAACGCCAATTTCACTTATATGTAAACAAAATGCGAAAATAAAGAAGAGATCCGCAACTCAAGGCACCAATCTACCGCAAGGGATTAGGCAACTTTTCGGTT
***************************************************************************......(((((((.((...)).)))))))......(((((((((((((.....(((........))))))))))......((((........))))......))))))******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
.................................................................................................................TTATGAATCATTTTTT......................................................................................................................... 16 0 1 1.00 1 1 0 0
.................................................................................ACCAGGTGGGCTACAGTAAG..................................................................................................................................................... 20 0 1 1.00 1 0 1 0
..................................ATGTTGGGAGTTAGATT....................................................................................................................................................................................................... 17 2 14 1.00 14 14 0 0
..............CCCGAACGACGGAAGGAA.......................................................................................................................................................................................................................... 18 2 9 0.11 1 1 0 0
...........................................................................................................................................................................................................................CTACCGGAAGGGAATA............... 16 2 20 0.05 1 1 0 0
..............................................................................................................................TTTTTTGAAATCGCTTAG.......................................................................................................... 18 2 20 0.05 1 1 0 0
................................................................................................................................................................................................AAGAGATCAGGAACTC.......................................... 16 2 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:14983212-14983461 + dsi_1666 GATCTAAGAT-TCAAGGGCTTGCTGCATTCGTTT-A---------TACAA-CT------ATCAATCTAA-GTGTACGTTTAAA-GA-CTAA-----ACC-------AC---ATTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGATGTCATTCCCAA-------------------A------TGTTTCTAATACTTAGTAAA-A-------A---------AAAACTTTAGAAAATCCAGC-----ATTGC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TTTGTTTTACGCTT------TTA-----TTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCTAAT---------------CCG-TTGAAA------------AGCCAA
droSec2 scaffold_1:11790157-11790406 + GATCGAAGAT-TCAAGGGCTTGCTGCATTCGTTT-A---------TATAA-CT------ATCAATCTAA-GTGTACGTTTAAA-GA-CTAA-----ACC-------AC---ATTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGATGTCATTCCCAA-------------------A------TGTTTCTAATACTTAGTAAA-A-------A---------AAAACTTTAGAAAATCAAGC-----ATTAC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TTTGTTTTACGCTT------TTA-----TTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCTAAT---------------CCG-TTGAAA------------AGCCAA
dm3 chr2R:14313273-14313518 + GATCGAAGAT-CCAAGGGCTTGCTGCATTCGTTT-A---------TATAA-CT------ATCAATCTAA-GTGTACGTTTAAA-GA-CTAA-----ACC-------AC---ATTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGATGTCATTCCCAA-------------------A------TGTTTCTAATACTTAGTAAA-A--------------------ACATTAGAAAATCATGC-----ATTGC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TTTGTTTTACGCTT------TTA-----TTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCTAAT---------------CCG-TTGAAA------------AGCCAA
droEre2 scaffold_4845:8521197-8521441 + GATCGAAGAT-CAAAGGGCTTGCTACATTCGTTT-A---------TATAA-CA------ATCGATCTAA-GTGTACGTTTAAA-GA-CTAA-----ACC-------AC---GTTGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---C----TGATGTCATTCCCAA-------------------A------TGTTTCCAATATTTAGTAAA-A--------------------ACTTTAGCAAATCAAGC-----ATTGC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TTTGTTTTACGCTC------TTA-----TTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCAATT---------------CCG-TTGAAA------------AGCCTA
droYak3 2R:14873251-14873498 - GATCGAAGAT-CAAAGGGCTTGCTACATTCGTTT-A---------TATAA-CT------ATCGATCTAA-GTGTACGTTTAAA-GA-CTAA-----ACC-------AC---ATTGG---GTGTCC----------------------------------------------------------------------------------------CA--------------AC---C----TGATGTCATTCCCAA-------------------A------TGTTTCCAATATTTAGTAAAGA--------------------ACTTTAGCAAATCAAGC-----ATTGC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TTTGTTTTACGCTT------TTA-----TTTCTTCTCTAGGCGTTGAGTTCCGTGTTTAGATGGCGTTCCCAATT---------------CCG-TTGAAA------------AGCCGA
droEug1 scf7180000409672:3333169-3333433 + GAACATAGAT-CAGAGGTCTTGCTGCATTCATTT-A---------TATAAACT------ATCAATCTAA-GTGTACGTTTAGA-GA-CTCA-----ACC-------AT---ATTGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---A----AGTTGTCATTCCCAG-------------------A------TGTTTTCAATATTTAGTAAA-A-------ACACAAAAACAAAACATTAGTAAATCGAGT-----ATTGC-----AGT---TAA---A-----------GTA--TACATAAATA--TACA--------ATTGTTTTACAATT------TTA-----TTTCTTCTCTAGGCGGTGAGTTCCCTGGTTAGATGGCGTTCCCGCTC---------------CTG-ATTAAA------------AGCAAA
droBia1 scf7180000302292:2354826-2355074 + AAACGTAGAT-CGGAGGGCTTGCTGCATTCACTT-A---------AAAAA-CT------ATCAATCTAA-GTGTAAATTTAGA-GA-CTAA-----ACC-------ATTTTGTTGG---GTATC--------------------------------------------------------------------------------------------------------------A----AGTTGTCATTCCCAA-------------------G------TGTTTCCAATATTTTGTAAA-A--------------------ACTTTGGCGGATCAAGC-----ATTGC-----AGT---TAA---A-----------GTA--TAC---TATA--TACA--------ATTGTTTTACACTT------TTA-----TTTCTTCTCTAGGCGTTCAGTTCCTTGGTTAGATGGCGTTCCCGCTC---------------CTGATTGAAA------------AGCCAA
droTak1 scf7180000416016:402706-402946 - GAGCTTAGAT------------CTGCATTCATTT-A---------ATTAA-CT------TTCAATCTAA-GTGTAAATTTAGA-GA-CTTA-----ACC-------AT---TTTGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---C----AGTTGTCATTCCCAG-------------------A------TGTTTCCAATATTTAGTAAA-A-----------------AAAACTTTAGCGAATCGAGC-----ATTGC-----AGT---TAA---A-----------GTA----CCTATATA--TACA--------ATTGTTTTACACTT------TTA-----TTTCTTCTCTAGGCGTTCAGTTCCTTGGTTAGATGGCGTTCCCGATC---------------CTG-ATAGAA------------AGCCAA
droEle1 scf7180000489694:162719-162960 + GAGCGTAGAT-CGAAGGGCTTGCTGCATTCATTT-A---------TATAA-CT------ATCGGTCTAA-GTGTACGTTTAGA-GA-CTTA-----ACC-------AT---ATTGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---A----AATCGTCATTCCCAA-------------------G------TGTTTCCAATAATTAGTAAA-A--------------------ACTTTTGCTAAAAAAGC-----ATTGC-----AGT---TAC-----------------------------A--TATAT-------TTTATTTTTCATTTATA-TTT-------TATTTTCTCTAGGCGTTGAGTTCTGTGGCTAGATGGCGGTCCCGATC---------------CCG-ATAAAA------------AGCCGA
droRho1 scf7180000779872:59287-59535 + GGGCGTAGAT-TGAGGGGCTTGCTGCATTCATTT-A---------TATAA-CT-----AATCAGACTAA-GCGTACGTTTTAGAGA-CTAA-----ACC-------AT---ATTGG---GTGTCA--------------------------------------------------------------------------------------------------------AC---A----AATCGTCATTCCCGA-------------------A------TGTTTCCGATATTTAGTAAACA--------------------AATTTAGCGAAAAAAAC-----ATTGC-----AGT---TAA---A-----------TTATATACATATACA--TACG--------TTTATTTTATATTT------CTA-----TTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGGTCCCGA----------------------T-AAA------------AGCCAA
droFic1 scf7180000453583:47896-48132 + GAATGCGGAT-CGGAGGGCTTGCTGCATTCATTTTT---------TATAA-CT------A----TCTAA-GCATTCGTATTTA-GA-CTAA-----ACC-------AT---TTTGG---GTGTCC--------------------------------------------------------------------------------------------------------TC---A----AGTCGTCATTCCCAA-------------------A------TGTTTCCAAAACTTAGTAAA-A--------------------TCTTTAGCGAAACGAGC---------------AGT---TAA---A-----------GAA--------TATG--TTCT--------TTTATTTTACACTT------TTT-----TTTCTTCTCTAGGCATTGAGTTCCGTGGTTAGATGGCGGTCCCGGTC---------------CCG-ATAAAA------------AGCCAA
droKik1 scf7180000302639:19835-20037 + G---------------------CCGAATTCATTT-A---------TCTAA-CC------ATCAGTCTAATGTGTACTTGCAAA-GA-CCAA-----ATA-------ATTATATTCG---G------------------------------------------------------------------------------------------------------------------A----AGCCGTCATTCCCAG-------------------GGTCTTTTCTTTCCAATACTTAGTTGTCG--------------------TTTTTAGCGGATAAC-A-----A---------------------------------ATA----CAA--ATA--TATA----------T--------ATT------TTA-----TTTCTTCTCTAGGCCTTGAGTCACGTGGTTAGATGGCGATCCC---------------------A-TTGAGA------------AGCAAA
droAna3 scaffold_13266:4219781-4220061 - GGTCTATGGTCTATATAGCTTGCTAAAATAATTA-A---------T-----------------AACTAA-GTTTATGTCTAAA-GA-CTTATCACAACC------AAC---CTTGG---GTGTCTGTAACGAA-------------------------------------------------------------------------------------------------AAGGAAGTTAGTTTTCATTCCCAAAAAA------AGCAAAAAAT------TATTTCCAATTTTCAGAATACATTTCTAAA---------AA--------AAATTTAAGT-----ATTGC-----TGAG--TACTG-AG----------TTTTTTACAT---TT--TAAA--------CTTGTTTTACACTT------TTG-----TCTCTTCTTTAGGCTTTGAGTTACGTGATTAGATGGCGAAACGGTTC---------------CCG-ATA-AG------------TGCGAA
droBip1 scf7180000395751:33315-33613 - GGCCTA---T-CA--TAGCTTGCTTTAATAACTT-A---------TAATACCA------TTCGATCTAA-GTTTATGTCTAAA-GA-CTTGTAACAACA-------AC---CTTGG---GTGTCTGCAACGAA-------------------------------------------------------------------------------------G----------AAC-GAAGTTAGTTTTCATTCCCAAAAAAAAACCAAGCAAAGAAT------TATTTCCAATTTTCAGAATACATTTAAAAA---------AAAACA--------TTAAGT-----ATTGC-----TGAT--TACTG-A-----------GTTTTTACAT---TT--TAAA--------TTTGTTTTACACTT------TTG-----TCTCTTCT-TAGGCTTTGAGTTACGTGATTAGATGGCGAAACGGGTC---------------CCG-ATAA-G---TGCAAGTTTTGCAAA
dp5 3:11569965-11570247 + GAGTG--GAG-TGGAGAACTTGCTGCATTCATAT-ACATATATACTATAC-CT------ATCAGACTAA-GTGTATGTGTAAA-GAACTAA-----CCAACCCCCTGC---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGGGG----------AACGGAA---CCTCTTCATTCCCAT-------------------C------TTTTT-CAATACTTATTAAT---CTT-T--AACAGAAAAA---------------AACC-----ATTGTAGAAGAAAATAT--ATATAT---------GTA--TACAC--ATG--TATA--------TTTGTTTTAAATTT-TATTTTTG-----TTTATTCTCTAGGGTTTTGCATCCATGGTTAGGTGGCGCATAC---------------------T-GTAAGG------------AGAACA
droPer2 scaffold_4:6968976-6969258 + GAGTG--GAG-TGGAGAACTTGCTGCATTCATAT-ACATATATACTATAC-CT------ATCAGACTAA-GTGTATGTGTAAA-GAACTAA-----ACAACCCCCCGC---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGGGG----------AACGGAA---CCTCTTCATTCCCAT-------------------C------TTTTT-CAATACTTATTAAT---CTT-T--AACAGAAAAA---------------AACC-----ATTGTAGAAGAAAATAT--ATATAT---------GTA--TACAC--ATG--TATA--------TTTGTTTTAAATTT-TATTTTTG-----TTTATTCTCTAGGGTTTTGCATCCATGGTTAGGTGGCGCATAC---------------------T-GTAAGG------------AGAAAA
droWil2 scf2_1100000004954:3415684-3415906 - AAAT------------TACTTACTGCATTCTGTT-A--------CTATTG-AT------AGAATTCTAA-GTGTAA---------------------TC-------AC---AATTA---ATGTTA--------------------------------------------------------------------------------------------------------AT---C-----ATATTCATTCCTAG-------------------C------TCTTT-TATAACTTGA-AAT-G-------A---------AGATCA--------------------TTGTGTAATTGTGTATAA---A-----------ATATTTACAA---TTTGTTTATTTTTACAAACGT--TTCTCTT------CAT-----TTTCTTCTCTAGGCTTTGAGTCGCGTGATTAGATGGCGTAACTGA----------------------TAAGG---A--------ACAAGA
droVir3 scaffold_12875:19960969-19961047 - AAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA--------TATTTTTTATATTT------TCATTT--ATTTTTCTGTAGGCTTTGGGTCGTGTAGCTAAATGGCGTAACTGA-------------------------CA------------AATATA
droMoj3 scaffold_6496:6233993-6234301 + CTTTTA-------GAATTCTTTATGCATAAATTT-A---------TACAA-ACATATAAATGTAACTAA-GTGTCTGCTTTAT-A------------CA-------AA---TATGCATT--ATTA-----------------------------------ACATATTTAACACACAG--------CCACACACAAAAACACACATGAAAATTAAAAAAA----------AGC-------AAAGTTCATTCCTAA-------------------C------TTTTT-TGCCGCTCGA----------------------------CTTAGCA-------------------AAAGAATATGT--GTATATTATTTATCAATA--TATATATGTA--TATT--------TTTA-----TATTT------TCATTTATTTTTTTCTATAGACTTTGGGTCGTGTGGCTAAATGGCGTACATAAGAAATTTATTCCAAAATTTA-ATTTAA------------AGTT-A
droGri2 scaffold_15245:11576767-11577080 + TAT--------------ATTTACTGAATTCAATTTA---------CG-------------TAAATCTAA-GTGTATGTTTAAT-GT-TCAAGCAAAACC------AAA-----AGG---ACACCAACAACAAGAAATGTAAACAAAACTATACATTGATAACGTATTTA---CGCTAACTTTTGTTAACACACACAGACACACATGAAAG-------AGATAATCATTGTG---C----GGATTTCATTCCAAA-------------------C------TTT-TTTGCCCCTTCGTAAG---CTT-T--GATTGAA----------------AGAAGCAAAAAATTGTA---------------------------------T-----AATA--TATA-----------TTTTTATATTT------TCA-----TTTTCTTCGTAGACTTTGGGTCGCTTGGCTAAATGGCGTAACTGA-------------------------AAAAAA------AAAAACAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GATCTAAGAT-TCAAGGGCTTGCTGCATTCGTTT-A---------TACAA-CT------ATCAATCTAA-GTGTACGTTTAAA-GA-CTAA-----ACC-------AC---ATTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGATGTCATTCCCAA-------------------A------TGTTTCTAATACTTAGTAAA-A-------A---------AAAACTTTAGAAAATCCAGC-----ATTGC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TTTGTTTTACGCTT------TTA-----TTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCTAAT---------------CCG-TTGAAA------------AGCCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..TCTAAGAT-TCAAGGGCTTGCTGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26115.001500100067010000000
..TCTAAGAT-TCAAGGGCTTGCTGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25113.001300000057010000000
....TAAGAT-TCAAGGGCTTGCTGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.001000200004121000000
........................................................................................TAA-----ACC-------AC---ATTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGA...........................................................................................................................................................................................................................................................................................2614.00400000011200000000
...CTAAGAT-TCAAGGGCTTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00301200000000000000
.................................................................CTAA-GTGTACGTTTAAA-GA-CT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200110000000000000
...............................................................................TAAA-GA-CTAA-----ACC-------AC---ATTGGATG--GT..................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000020000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGCGTTCCCTAAT---------------CCG-TTGAAA------------......2612.00200000020000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TT------TTA-----TTTCTTCTCTAGGCGTTGAGT.....................................................................2612.00200000020000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTCTCTAGGCGTTGAGTTCCGT................................................................2612.00200000010001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGGTTAGATGGCGTTCCCTAA............................................2512.00200000000002000000
...CTAAGAT-TCAAGGGCTTGCTGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000020000000000
........................................................................................................................................................................................................................................................................................................................................................ATTGC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TTTG..................................................................................................................2711.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................AGC-----ATTGC-----GGT---TAA---A-----------GTG--------AAA.....................................................................................................................................2111.00100000000001000000
....TAAGAT-TCAAGGGCTTGCTGCATTCGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.................................................................................................................................................................................................................................................................................................TACTTAGTAAA-A-------A---------AAAACTTTAGAAAA................................................................................................................................................................................................2711.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGCGTTGAGTTCCGTG...............................................................1911.00101000000000000000
....TAAGAT-TCAAGGGCTTGCTGCATTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CTT------TTA-----TTTCTTCTCTAGGC............................................................................2011.00100100000000000000
..................CTTGCTGCATTCGTTT-A---------TACAA-CT------ATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTA-----TTTCTTCTCTAGGCGTTGAG......................................................................2311.00100000001000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCGTTGAGTTCCGTGGTTAGATGGCG....................................................2911.00100000001000000000
...................................................................AA-GTGTACGTTTAAA-GA-CT....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
......................................................................................................................G--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGATGTCATT....................................................................................................................................................................................................................................................................................1811.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTAGGCGTTGAGTTCCGTGGT.............................................................2511.00100000000001000000
...........TCAAGGGCTTGCTGCATTCGTTT-A---------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
..TCTAAGAT-TCAAGGGCTTGCTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
..TCTAAGAT-TCAAGGGCTTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................ATTGC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TTTGTT................................................................................................................2911.00100000010000000000
..TCTAAGAT-TCAAGGGCTTGCTGCATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
...............................................................................TAAA-GA-CTAA-----ACC-------AC---ATTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.............................................................................................................................................................................................................................................................................................................A-------A---------AAAACTTTAGAAAA................................................................................................................................................................................................1611.00100000000000010000
.................................................................CTAA-GTGTACGTTTAAA-GA-CG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.ATCTAAGAT-TCAAGGGCTTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATGGCGTTCCCTAAT---------------CCG-TTGA....................2611.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGCGTTGAGTTCCGTGGTTAGATG.......................................................2711.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................TTTAGAAAATCCAGC-----ATTGC-----GGT---TAA---A-----------G..................................................................................................................................................2811.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCTAAT---------------CCG-TTGAAA------------AGC...2211.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................T------TTA-----TTTCTTCTCTAGGCGTTGAGT.....................................................................2511.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTCCGTGGTTAGATGGCGTT..................................................2411.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................AAATCCAGC-----ATTGC-----GGT---TAA---A-----------GTG--------A.......................................................................................................................................2511.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTAGGCGTTGAGTTCCGTGGTTA...........................................................2611.00100000000001000000
.............................................................................TTTAAA-GA-CTAA-----ACC-------AC---ATTGGATG--GTC.................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.................................................................................................................................................................................................................................................ATGTCATTCCCAA-------------------A------TGTTT................................................................................................................................................................................................................................................1911.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCGTTGAGTTCCGTGGTTAGATGGCGTT..................................................3111.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTCTAGGCGTTGAGTTCCGTGGTT............................................................2811.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................TTGC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TT....................................................................................................................2411.00100000001000000000
..............................................................................TTAAA-GA-CTAA-----ACC-------AC---ATTGGATG--....................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
..TCTAAGAT-TCAAGGGCTTGCTGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
............................................................................................................................................................................................................................................................................................................................................ATCCAGC-----ATTGC-----GGT---TAA---A-----------G..................................................................................................................................................2011.00100000000001000000
.ATCTAAGAT-TCAAGGGCTTGCTGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................TTTAGAAAATCCAGC-----ATTGC-----GGT---T....................................................................................................................................................................2411.00100000000001000000
.........T-TCAAGGGCTTGCTGCATTCGTTT-A---------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
...............................................................................TAAA-GA-CTAA-----ACC-------AC---ATTGGATG--GTC.................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
....................TGCTGCATTCGTTT-A---------TACAA-CT------ATCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.ATCTAAGAT-TCAAGGGCTTGCTGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
droSec2
GATCGAAGAT-TCAAGGGCTTGCTGCATTCGTTT-A---------TATAA-CT------ATCAATCTAA-GTGTACGTTTAAA-GA-CTAA-----ACC-------AC---ATTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGATGTCATTCCCAA-------------------A------TGTTTCTAATACTTAGTAAA-A-------A---------AAAACTTTAGAAAATCAAGC-----ATTAC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TTTGTTTTACGCTT------TTA-----TTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCTAAT---------------CCG-TTGAAA------------AGCCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGTTCCGTGGTTAGATGGC.....................................................2312.0020110
.................................................................................................CC-------AC---ATTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGATGT........................................................................................................................................................................................................................................................................................2511.0011000
................................TT-A---------TATAA-CT------ATCAATCTAA-GTGTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.....................................................................................................................TG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGATGTCATTCCCAA-------------------A------TGT..................................................................................................................................................................................................................................................2811.0011000
........AT-TCAAGGGCTTGCTGCATTCGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.........................................................................TACGTTTAAA-GA-CTAA-----ACC-------AC---ATTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTAGATGGCGTTCCCTA.............................................1911.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGCGTTGAGTTCCGTGGTT............................................................2211.0010010
............................................................................................................................................................................................................................................................................................................................................ATCAAGC-----ATTAC-----GGT---TAA---A-----------GTG--------........................................................................................................................................2211.0010010
.............................................................................................................................................................................................................................................................................................................................................TCAAGC-----ATTAC-----GGT---TAA---A-----------GTG--------A.......................................................................................................................................2211.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCGTTGAGTTCCGTG...............................................................1811.0010010
..............................................................................................................................................................................................................................................................................................................................................CAAGC-----ATTAC-----GGT---TAA---A-----------GTG--------AAAG--..................................................................................................................................2411.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCTAAT---------------CCG-TTGAAA------------AGC...2211.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTAGGCGTTGAGTTCCGTG...............................................................2111.0010010
..............................GTTT-A---------TATAA-CT------ATCAATCTAA-GTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
....................................................................................GA-CTAA-----ACC-------AC---ATTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----C.............................................................................................................................................................................................................................................................................................2711.0010010
.............................................................CAATCTAA-GTGTACGTTTAAA-GA-C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTCTAGGCGTTGAGTTCCGTGT..............................................................2611.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTAGGCGTTGAGTTCCGTG...............................................................2311.0010010
GATCGAAGAT-TCAAGGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
...........................................................................................................................................................................................................................................................................................................................................AATCAAGC-----ATTAC-----GGT---TAA---A-----------GT.................................................................................................................................................2211.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTCTAGGCGTTGAGTTCCGTGGTT............................................................2711.0010010
..........................ATTCGTTT-A---------TATAA-CT------ATCAATCTAA-GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGTGGTTAGATGGCGTTCCCT..............................................2411.0010100
..................................................................................A-GA-CTAA-----ACC-------AC---ATTGGATG--GT..................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTCTAGGCGTTGAGTTCCGTG...............................................................2411.0010100
.................................................................................................................TGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGATGTCATTCCC.................................................................................................................................................................................................................................................................................2611.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTCTAGGCGTTGAGTTCCGTGGT.............................................................2711.0011000
....................................................................................................................................................................................................................................................TCATTCCCAA-------------------A------TGTTTCTAATACTT.......................................................................................................................................................................................................................................2511.0011000
dm3
GATCGAAGAT-CCAAGGGCTTGCTGCATTCGTTT-A---------TATAA-CT------ATCAATCTAA-GTGTACGTTTAAA-GA-CTAA-----ACC-------AC---ATTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGATGTCATTCCCAA-------------------A------TGTTTCTAATACTTAGTAAA-A--------------------ACATTAGAAAATCATGC-----ATTGC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TTTGTTTTACGCTT------TTA-----TTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCTAAT---------------CCG-TTGAAA------------AGCCAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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..........................................................................................................................................................................................................................................................................................................................................AAATCATGC-----ATTGC-----GGT---TAA---A-----------G..................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAGGGCTTGCTGCATTCGTTT-A---------TATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................ATTAGAAAATCATGC-----ATTGC-----GGT---TAA---A-----------G..................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............CAAGGGCTTGCTGCATTCGTTT-A---------TAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGTTCCGTGGTTAGATGG......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AT-CCAAGGGCTTGCTGCATTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................TAA-GTGTACGTTTAAA-GA-CTAA-----ACC-------AC---AA............................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TACGCTT------TTA-----TTTCTTCTCTAGGC............................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TCATTCCCAA-------------------A------TGTTTCTAATACT........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTCTAGGCGTTGAGT.....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TGC-----ATTGC-----GGT---TAA---A-----------GTG--------A.......................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCTCTAGGCGTTGAGTTCCGTTT..............................................................2611.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TACA--------TTTGTTTTACGCTT------TTA-----TTTCTTC...................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGATGTCATTCCCA................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TTAGTAAA-A--------------------ACATTAGAAAATCATG...........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTTACGCTT------TTA-----TTTCTTCTCTA...............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................A--------------------ACATTAGAAAATCATGC-----ATTGC-----GGT---T....................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TGTACGTTTAAA-GA-CTAA-----ACC-------AC---..............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TAA-CT------ATCAATCTAA-GTGTACGTTTAAA-G........................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TAA-----ACC-------AC---ATTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGATG.........................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AATCTAA-GTGTACGTTTAAA-GA-CT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGAAGAT-CCAAGGGCTTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTCCGTGGTTAGATGGC.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
GATCGAAGAT-CCAAGGGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................A---------TATAA-CT------ATCAATCTAA-GTGTACG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTTTACGCTT------TTA-----TT........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
....GAAGAT-CCAAGGGCTTGCTGCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAGTTCCGTGGTTAGATGGCGT...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGTTCCCTAAT---------------CCG-........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................ATCTAA-GTGTACGTTTAAA-GA-......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATGGCGTTCCCTAAT---------------CCG-TTGA....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAGGGCTTGCTGCATTCGTTT-A---------TATAA-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGCGTTGAGTTCCGTGGTTAGATG.......................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TTT-A---------TATAA-CT------ATCAATCTAA-GTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTTGAGTTCCGTGGTTA...........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TCTAA-GTGTACGTTTAAA-GA-CTAA-----AC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................AA-GTGTACGTTTAAA-GA-CTAA-----ACC-------AC---..............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGTTCCCTAAT---------------CCG-TTGAAA------------AGC...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
GATCGAAGAT-CCAAGGGCTTGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AC---ATTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGAT..........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGGTTAGATGGCGTTCCCT..............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CA--------TTTGTTTTACGCTT------TTA-----TTTCTT....................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTAGATGGCGTTCCCTAA............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TTTCTAATACTTAGTAAA-A--------------------AC.........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGAGTTCCGTGGTTAGATGGC.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................AAATCATGC-----ATTGC-----GGT---TAA---A-----------GTG--------AAT.....................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGTTAGATGGCGTTCCC...............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TATAA-CT------ATCAATCTAA-GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGGTTAGATGGCGTTCCCTAAT---------------CCG-T.......................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTAGATGGCGTTCCCTAAT---------------C...........................2311.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACGCTT------TTA-----TTTCTTCTCTAGG.............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................ACC-------AC---ATTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----C.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AATACTTAGTAAA-A--------------------ACATTAGAAA.................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGCGTTCCCTAAT---------------CCG-........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............AAGGGCTTGCTGCATTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTCTCTAGGCGTTGAGTT....................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TCTAATACTTAGTAAA-A--------------------ACATTAGAAAA................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TACGTTTAAA-GA-CTAA-----ACC-------AC---ATTGGATG--....................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGATGGCGTTCCCTAAT---------------CCG-........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTCTCTAGGCGTTGAGTTCCGT................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................TAGAAAATCATGC-----ATTGC-----GGT---TAA---A-----------G..................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................T------TTA-----TTTCTTCTCTAGGCGTT.........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TCATGC-----ATTGC-----GGT---TAA---A-----------GTG--------AATA--TA................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..........................................................................................................................................................................................................................................................................................................AA-A--------------------ACATTAGAAAATCATGC-----ATTGC-----GG.........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGTTGAGTTCCGTGGT.............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TACGTTTAAA-GA-CTAA-----ACC-------AC---ATTGGATG--G...................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCGTTGAGTTCCGTGGTTAGATT.......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ATCATGC-----ATTGC-----GGT---TAA---A-----------GT.................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..TCGAAGAT-CCAAGGGCTTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CA--------TTTGTTTTACGCTT------TTA-----TTTCTTG...................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................AATCATGC-----ATTGC-----GGT---TAA---A-----------GTG--------A.......................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................CC--------------------------------------------------------------------------------------------------------AC---C----CGATGTCATTCCC.................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GCTTGCTGCATTCGTTT-A---------TATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTACGCTT------TTA-----TTTCTTCTCTAG..............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TAA-GTGTACGTTTAAA-GA-CTAA-----AC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TTGGATG--GTCC--------------------------------------------------------------------------------------------------------AC---C----CGATGTCATT....................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TAGTAAA-A--------------------ACATTAGAAAATCATGC-----AT...................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTTACGCTT------TTA-----TTTCTTCTCT................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AAATCATGC-----ATTGC-----GGT---TAA---A-----------GT.................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................TAA-CT------ATCAATCTAA-GTGTACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
droEre2
GATCGAAGAT-CAAAGGGCTTGCTACATTCGTTT-A---------TATAA-CA------ATCGATCTAA-GTGTACGTTTAAA-GA-CTAA-----ACC-------AC---GTTGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---C----TGATGTCATTCCCAA-------------------A------TGTTTCCAATATTTAGTAAA-A--------------------ACTTTAGCAAATCAAGC-----ATTGC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TTTGTTTTACGCTC------TTA-----TTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGTTCCCAATT---------------CCG-TTGAAA------------AGCCTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTAGGCGTTGAGTTCCGTGGTT............................................................2515.0050000005
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTAGGCGTTGAGTTCCGT................................................................2013.0031000200
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGTTCCGTGGTTAGATGGC.....................................................2312.0020000110
.........................................................................................................................GTCC--------------------------------------------------------------------------------------------------------AC---C----TGATGTCATTCCCAA-------------------A------T....................................................................................................................................................................................................................................................2412.0022000000
.....................................................................................................................................................................................................................................................................................................TAGTAAA-A--------------------ACTTTAGCAAATCAAGC-----ATT..................................................................................................................................................................................2812.0022000000
..............................................ATAA-CA------ATCGATCTAA-GTGTACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020001100
........................................................................................TAA-----ACC-------AC---GTTGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---C----TGA...........................................................................................................................................................................................................................................................................................2512.0022000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTCTAGGCGTTGAGTTCCGTGGT.............................................................2611.0011000000
.................................................................CTAA-GTGTACGTTTAAA-GA-......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.................................................................................................................TGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---C----TGATGTCA......................................................................................................................................................................................................................................................................................2011.0010000100
.............................................................................................................................................................................................................................................................................................................................................TCAAGC-----ATTGC-----GGT---TAA---A-----------GTG--------A.......................................................................................................................................2211.0010000100
...................................A---------TATAA-CA------ATCGATCTAA-GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................CTC------TTA-----TTTCTTCTCTAGGCGTTGA.......................................................................2511.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTCTAGGCGTTGAGTTCC..................................................................2111.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GCTC------TTA-----TTTCTTCTCTAGGCGTTGA.......................................................................2611.0010000100
...........................................................................................................................................................................................................................................................................................................................................AATCAAGC-----ATTGC-----GGT---TAA---A-----------GTG--------........................................................................................................................................2311.0011000000
.....AAGAT-CAAAGGGCTTGCTACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCGTTGAGTTCCGTGGTT............................................................2111.0010000100
................................................................................................................TTGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---C----TGATGTC.......................................................................................................................................................................................................................................................................................2011.0010000100
..........................................................................................................................................................................................................................................................................................................................................AAATCAAGC-----ATTGC-----GGT---TAA---A-----------...................................................................................................................................................2111.0010000100
..............................................................................................................................................................................................................................................................................................................................................CAAGC-----ATTGC-----GGT---TAA---A-----------GTG--------AAT.....................................................................................................................................2311.0010000100
............................................................................................................................................................................................................................................................................................................................................ATCAAGC-----ATTGC-----GGT---TAA---A-----------GTG--------AA......................................................................................................................................2411.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTC------TTA-----TTTCTTCTCTAGGCGTTGA.......................................................................2711.0010010000
.............................................................................................................................................................................................................................................................................................................A--------------------ACTTTAGCAAATCAAGC-----ATTGC-----GGT---.....................................................................................................................................................................2611.0011000000
..............................................ATAA-CA------ATCGATCTAA-GTGTACGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
.................................................................CTAA-GTGTACGTTTAAA-GA-CTAA-----AC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
.......................................................................................................................................................................................................................................................................................................................................AGCAAATCAAGC-----ATTGC-----GGT---TAA---...............................................................................................................................................................2311.0010010000
.........................................................................................................................................................................................................................................................................................................AAA-A--------------------ACTTTAGCAAATCAAGC-----ATTGC-----...........................................................................................................................................................................2611.0010100000
...................................A---------TATAA-CA------ATCGATCTAA-GTGTACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.................................................................................................................TGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---C----TGATGTC.......................................................................................................................................................................................................................................................................................1911.0010000010
............................................................................................................................................................................................................................................................................................................................................ATCAAGC-----ATTGC-----GGT---TAA---A-----------GT.................................................................................................................................................2111.0010000010
............AAAGGGCTTGCTACATTCGTTT-A---------TA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
...........................................................................................................................................................................................................................................................................................................................................................GC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TTTGTT................................................................................................................2611.0011000000
GATCGAAGAT-CAAAGGGCTTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
............AAAGGGCTTGCTACATTCGTTT-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
...........................................................ATCGATCTAA-GTGTACGTTTAAA-GA-CTAA-----.............................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTAGATGGCGTTCCCAATT---------------CC..........................2511.0011000000
.......................................................................................................................GTGTCC--------------------------------------------------------------------------------------------------------AC---C----TGATGTCATTCCCAA-------------------A------TG...................................................................................................................................................................................................................................................2711.0011000000
GATCGAAGAT-CAAAGGGCTTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
..TCGAAGAT-CAAAGGGCTTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
....GAAGAT-CAAAGGGCTTGCTACAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCGTGGTTAGATGGCG....................................................1911.0010000010
..............................................ATAA-CA------ATCGATCTAA-GTGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTCCCAATT---------------CCG-TTGAAG------------......2111.0011000000
.........................................................................................AA-----ACC-------AC---GTTGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---C----TGAT..........................................................................................................................................................................................................................................................................................2511.0010000100
........................................................................................TAA-----ACC-------AC---GTTGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---C----TGATG.........................................................................................................................................................................................................................................................................................2711.0010000010
droYak3
GATCGAAGAT-CAAAGGGCTTGCTACATTCGTTT-A---------TATAA-CT------ATCGATCTAA-GTGTACGTTTAAA-GA-CTAA-----ACC-------AC---ATTGG---GTGTCC----------------------------------------------------------------------------------------CA--------------AC---C----TGATGTCATTCCCAA-------------------A------TGTTTCCAATATTTAGTAAAGA--------------------ACTTTAGCAAATCAAGC-----ATTGC-----GGT---TAA---A-----------GTG--------AATA--TACA--------TTTGTTTTACGCTT------TTA-----TTTCTTCTCTAGGCGTTGAGTTCCGTGTTTAGATGGCGTTCCCAATT---------------CCG-TTGAAA------------AGCCGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................ATAA-CT------ATCGATCTAA-GTGTACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000020000
.................................................................CTAA-GTGTACGTTTAAA-GA-CT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000
.................................T-A---------TATAA-CT------ATCGATCTAA-GTGTACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCAATT---------------CCG-TTGAAA------------......1911.00101000000000
......................................................................................................................................................................................................................A--------------AC---C----TGATGTCATTCCCAA-------------------A------TGTT.................................................................................................................................................................................................................................................2411.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................T------TTA-----TTTCTTCTCTAGGC............................................................................1811.00100100000000
........................................................................................TAA-----ACC-------AC---ATTGG---GTGTCC----------------------------------------------------------------------------------------CA--------------AC---C----TGAT..........................................................................................................................................................................................................................................................................................2811.00101000000000
..................................................................................................................................................................................................................................................................................................ATTTAGTAAAGA--------------------ACTTTAGCA..................................................................................................................................................................................................2111.00101000000000
..............................................................GATCTAA-GTGTACGTTTAAA-GA-......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.......GAT-CAAAGGGCTTGCTACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGTTCCGTGTTTAGATGGCGTT..................................................2611.00100000010000
................................................................................................................................................................................................................................................................................................ATATTTAGTAAAGA--------------------ACTTTAGCA..................................................................................................................................................................................................2311.00101000000000
........................................................................................................................................................................................................................................................................................................................................GCAAATCAAGC-----ATTGC-----GGT---TAA---A-----------GT.................................................................................................................................................2511.00100000010000
...................................................CT------ATCGATCTAA-GTGTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
......................................................................................................................................................................................................................................................................................................AGTAAAGA--------------------ACTTTAGCAAATCAA............................................................................................................................................................................................2311.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGTTCCCAATT---------------CCG-TT......................2111.00101000000000
..............................................ATAA-CT------ATCGATCTAA-GTGTACGTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.......GAT-CAAAGGGCTTGCTACATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
GATCGAAGAT-CAAAGGGCTTGCTACATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
..................................................................................................................................................................................................................................................................................................................................................C-----ATTGC-----GGT---TAA---A-----------GTG--------AAT.....................................................................................................................................1911.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTCTCTAGGCGTTGAGT.....................................................................2111.00100000010000
...................................A---------TATAA-CT------ATCGATCTAA-GTGTACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
........AT-CAAAGGGCTTGCTACATTCGTTT-A---------T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.......................................................................................................................................................................................................................................................................................................GTAAAGA--------------------ACTTTAGCAAAT...............................................................................................................................................................................................1911.00101000000000
..............................................................................................................................................................................................................................................................................................................................................CAAGC-----ATTGC-----GGT---TAA---A-----------GTG--------AA......................................................................................................................................2211.00100000010000
........AT-CAAAGGGCTTGCTACATTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.............................................................................TTTAAA-GA-CTAA-----ACC-------AC---ATTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.........................................................................................................................GTCC----------------------------------------------------------------------------------------CA--------------AC---C----TGATGTCATTCCCAA-------------------A------TG...................................................................................................................................................................................................................................................2711.00101000000000
................................................................................................................................................................................................................................................................................................................................................AGC-----ATTGC-----GGT---TAA---A-----------GTG--------A.......................................................................................................................................1911.00101000000000
......................CTACATTCGTTT-A---------TATAA-CT------ATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
................................................................................................................................................................................................................................................GATGTCATTCCCAA-------------------A------TGTTT................................................................................................................................................................................................................................................2011.00101000000000
...........CAAAGGGCTTGCTACATTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.ATCGAAGAT-CAAAGGGCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGTTCCGTGTTTAGATGGC.....................................................2311.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCAATT---------------CCG-TTGAAA------------AGCCGA2511.00100000010000
..............................................................................................................................................................................................................................................................................................CAATATTTAGTAAAGA--------------------ACTTTA.....................................................................................................................................................................................................2211.00101000000000
..........................................................................................................................................................................................................................................................................................TTTCCAATATTTAGTAAA.................................................................................................................................................................................................................................1811.00101000000000
..................................................................................................C-------AC---ATTGG---GTGTCC----------------------------------------------------------------------------------------CA--------------AC---C----TG............................................................................................................................................................................................................................................................................................2111.00100000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAGTTCCGTGTTTAGATGGC.....................................................2411.00100000010000
................................................................................................................TTGG---GTGTCC----------------------------------------------------------------------------------------CA--------------AC---C----TGATGTCATTCC..................................................................................................................................................................................................................................................................................2711.00101000000000
.........................................................................................................................................................................................................................................................................................GTTTCCAATATTTAGTAAAGA--------------------ACTTT......................................................................................................................................................................................................2611.00101000000000
....................................................................................................................................................................................................................................................................................................................................TTTAGCAAATCAAGC-----ATTGC-----GGT---TAA---A-----------...................................................................................................................................................2711.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGTTCCGTGTTTAGATGGCGT...................................................2511.00100000010000
droEug1
GAACATAGAT-CAGAGGTCTTGCTGCATTCATTT-A---------TATAAACT------ATCAATCTAA-GTGTACGTTTAGA-GA-CTCA-----ACC-------AT---ATTGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---A----AGTTGTCATTCCCAG-------------------A------TGTTTTCAATATTTAGTAAA-A-------ACACAAAAACAAAACATTAGTAAATCGAGT-----ATTGC-----AGT---TAA---A-----------GTA--TACATAAATA--TACA--------ATTGTTTTACAATT------TTA-----TTTCTTCTCTAGGCGGTGAGTTCCCTGGTTAGATGGCGTTCCCGCTC---------------CTG-ATTAAA------------AGCAAASizeHit CountTotal NormTotal
No Reads
droBia1
AAACGTAGAT-CGGAGGGCTTGCTGCATTCACTT-A---------AAAAA-CT------ATCAATCTAA-GTGTAAATTTAGA-GA-CTAA-----ACC-------ATTTTGTTGG---GTATC--------------------------------------------------------------------------------------------------------------A----AGTTGTCATTCCCAA-------------------G------TGTTTCCAATATTTTGTAAA-A--------------------ACTTTGGCGGATCAAGC-----ATTGC-----AGT---TAA---A-----------GTA--TAC---TATA--TACA--------ATTGTTTTACACTT------TTA-----TTTCTTCTCTAGGCGTTCAGTTCCTTGGTTAGATGGCGTTCCCGCTC---------------CTGATTGAAA------------AGCCAASizeHit CountTotal NormTotal
No Reads
droTak1
GAGCTTAGAT------------CTGCATTCATTT-A---------ATTAA-CT------TTCAATCTAA-GTGTAAATTTAGA-GA-CTTA-----ACC-------AT---TTTGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---C----AGTTGTCATTCCCAG-------------------A------TGTTTCCAATATTTAGTAAA-A-----------------AAAACTTTAGCGAATCGAGC-----ATTGC-----AGT---TAA---A-----------GTA----CCTATATA--TACA--------ATTGTTTTACACTT------TTA-----TTTCTTCTCTAGGCGTTCAGTTCCTTGGTTAGATGGCGTTCCCGATC---------------CTG-ATAGAA------------AGCCAASizeHit CountTotal NormTotal
No Reads
droEle1
GAGCGTAGAT-CGAAGGGCTTGCTGCATTCATTT-A---------TATAA-CT------ATCGGTCTAA-GTGTACGTTTAGA-GA-CTTA-----ACC-------AT---ATTGG---GTGTCC--------------------------------------------------------------------------------------------------------AC---A----AATCGTCATTCCCAA-------------------G------TGTTTCCAATAATTAGTAAA-A--------------------ACTTTTGCTAAAAAAGC-----ATTGC-----AGT---TAC-----------------------------A--TATAT-------TTTATTTTTCATTTATA-TTT-------TATTTTCTCTAGGCGTTGAGTTCTGTGGCTAGATGGCGGTCCCGATC---------------CCG-ATAAAA------------AGCCGASizeHit CountTotal NormTotal
No Reads
droRho1
GGGCGTAGAT-TGAGGGGCTTGCTGCATTCATTT-A---------TATAA-CT-----AATCAGACTAA-GCGTACGTTTTAGAGA-CTAA-----ACC-------AT---ATTGG---GTGTCA--------------------------------------------------------------------------------------------------------AC---A----AATCGTCATTCCCGA-------------------A------TGTTTCCGATATTTAGTAAACA--------------------AATTTAGCGAAAAAAAC-----ATTGC-----AGT---TAA---A-----------TTATATACATATACA--TACG--------TTTATTTTATATTT------CTA-----TTTCTTCTCTAGGCGTTGAGTTCCGTGGTTAGATGGCGGTCCCGA----------------------T-AAA------------AGCCAASizeHit CountTotal NormTotal
No Reads
droFic1
GAATGCGGAT-CGGAGGGCTTGCTGCATTCATTTTT---------TATAA-CT------A----TCTAA-GCATTCGTATTTA-GA-CTAA-----ACC-------AT---TTTGG---GTGTCC--------------------------------------------------------------------------------------------------------TC---A----AGTCGTCATTCCCAA-------------------A------TGTTTCCAAAACTTAGTAAA-A--------------------TCTTTAGCGAAACGAGC---------------AGT---TAA---A-----------GAA--------TATG--TTCT--------TTTATTTTACACTT------TTT-----TTTCTTCTCTAGGCATTGAGTTCCGTGGTTAGATGGCGGTCCCGGTC---------------CCG-ATAAAA------------AGCCAASizeHit CountTotal NormTotal
No Reads
droKik1
G---------------------CCGAATTCATTT-A---------TCTAA-CC------ATCAGTCTAATGTGTACTTGCAAA-GA-CCAA-----ATA-------ATTATATTCG---G------------------------------------------------------------------------------------------------------------------A----AGCCGTCATTCCCAG-------------------GGTCTTTTCTTTCCAATACTTAGTTGTCG--------------------TTTTTAGCGGATAAC-A-----A---------------------------------ATA----CAA--ATA--TATA----------T--------ATT------TTA-----TTTCTTCTCTAGGCCTTGAGTCACGTGGTTAGATGGCGATCCC---------------------A-TTGAGA------------AGCAAASizeHit CountTotal NormTotal
No Reads
droAna3
GGTCTATGGTCTATATAGCTTGCTAAAATAATTA-A---------T-----------------AACTAA-GTTTATGTCTAAA-GA-CTTATCACAACC------AAC---CTTGG---GTGTCTGTAACGAA-------------------------------------------------------------------------------------------------AAGGAAGTTAGTTTTCATTCCCAAAAAA------AGCAAAAAAT------TATTTCCAATTTTCAGAATACATTTCTAAA---------AA--------AAATTTAAGT-----ATTGC-----TGAG--TACTG-AG----------TTTTTTACAT---TT--TAAA--------CTTGTTTTACACTT------TTG-----TCTCTTCTTTAGGCTTTGAGTTACGTGATTAGATGGCGAAACGGTTC---------------CCG-ATA-AG------------TGCGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTGATTAGATGGCGAAACGGTTC---------------CC..........................2814.004400000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTACGTGATTAGATGGCGAAA.................................................2312.002000002
........................................................................................................................................................................................................................................................................................................................................................ATTGC-----TGAG--TACTG-AG----------TT.................................................................................................................................................1812.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGTGATTAGATGGCGAAAC................................................2312.002200000
..............................................................................CTAAA-GA-CTTATCACAACC------AAC---CTTGG---GT....................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTGATTAGATGGCGAAACGG..............................................2311.001100000
.................................................................................................................TGG---GTGTCTGTAACGAA-------------------------------------------------------------------------------------------------AAGGAAGTTAG............................................................................................................................................................................................................................................................................................2811.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGTGATTAGATGGCGAAACGGT.............................................2511.001100000
....................................................................A-GTTTATGTCTAAA-GA-CTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTAGATGGCGAAACGGTTC---------------CCG-A.......................2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCTTTGAGTTACGTGATTAGATGGC.....................................................2811.001100000
..............................................................................................................................................................................................................................................TAGTTTTCATTCCCAAAAAA------AGCAAAA..............................................................................................................................................................................................................................................................2711.001100000
..........................................................................................................................................................................................................................................................................................TTTCCAATTTTCAGAATACATTTC...........................................................................................................................................................................................................................2411.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................AA--------CTTGTTTTACACTT------TTG-----TCTCTTCT..................................................................................2711.001100000
............................................................................................................................................................................................................................................................................................................................................TTTAAGT-----ATTGC-----TGAG--TACTG-AG----------TTTTT..............................................................................................................................................2811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTACACTT------TTG-----TCTCTTCTTTAGGC............................................................................2811.001010000
....TATGGTCTATATAGCTTGCTAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGATTAGATGGCGAAACGG..............................................2211.001100000
...............................................................................................AACC------AAC---CTTGG---GTGTCTGTAACGAA-------------------------------------------------------------------------------------------------A......................................................................................................................................................................................................................................................................................................2711.001001000
.................................................................................................................................................................................................................................................................................................................................................GT-----ATTGC-----TGAG--TACTG-AG----------T..................................................................................................................................................1911.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTAGATGGCGAAACGGT.............................................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAGATGGCGAAACGG..............................................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGCTTTGAGTTACGTGATTAGAT........................................................2611.001000010
.........................................................................................TATCACAACC------AAC---CTTGG---GTGTCTGTAAC...........................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.........................................................................................................AAC---CTTGG---GTGTCTGTAACGAA-------------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................2211.001000001
.........................................................................................................................GTCTGTAACGAA-------------------------------------------------------------------------------------------------AAGGAAGTTA.............................................................................................................................................................................................................................................................................................2211.001000010
.............................................T-----------------AACTAA-GTTTATGTCTAAA-GA-CT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGTTACGTGATTAGATGGCGA...................................................2511.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTACGTGATTAGATGGCGAA..................................................2311.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGAAACGGTTC---------------CCG-ATA-AG------------TGC...2611.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTACGTGATTAGATGGCGAA..................................................2411.001100000
........................................................................TTATGTCTAAA-GA-CTTATCACAACC------....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
............................................................................GTCTAAA-GA-CTTATCACAACC------AAC---CTT...........................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTAGATGGCGAAACGGTTC---------------CCG-AT......................2711.001100000
..............................................................................................CAACC------AAC---CTTGG---GTGTCTGTAAC...........................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
droBip1
GGCCTA---T-CA--TAGCTTGCTTTAATAACTT-A---------TAATACCA------TTCGATCTAA-GTTTATGTCTAAA-GA-CTTGTAACAACA-------AC---CTTGG---GTGTCTGCAACGAA-------------------------------------------------------------------------------------G----------AAC-GAAGTTAGTTTTCATTCCCAAAAAAAAACCAAGCAAAGAAT------TATTTCCAATTTTCAGAATACATTTAAAAA---------AAAACA--------TTAAGT-----ATTGC-----TGAT--TACTG-A-----------GTTTTTACAT---TT--TAAA--------TTTGTTTTACACTT------TTG-----TCTCTTCT-TAGGCTTTGAGTTACGTGATTAGATGGCGAAACGGGTC---------------CCG-ATAA-G---TGCAAGTTTTGCAAASizeHit CountTotal NormTotal
No Reads
dp5
GAGTG--GAG-TGGAGAACTTGCTGCATTCATAT-ACATATATACTATAC-CT------ATCAGACTAA-GTGTATGTGTAAA-GAACTAA-----CCAACCCCCTGC---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGGGG----------AACGGAA---CCTCTTCATTCCCAT-------------------C------TTTTT-CAATACTTATTAAT---CTT-T--AACAGAAAAA---------------AACC-----ATTGTAGAAGAAAATAT--ATATAT---------GTA--TACAC--ATG--TATA--------TTTGTTTTAAATTT-TATTTTTG-----TTTATTCTCTAGGGTTTTGCATCCATGGTTAGGTGGCGCATAC---------------------T-GTAAGG------------AGAACASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................AA---------------AACC-----ATTGTAGAAGAAAATAT--A.................................................................................................................................................................2413.0030000000300
.........................................ATACTATAC-CT------ATCAGACTAA-GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020100100000
..........................................................................................................GC---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGGGG----------A.......................................................................................................................................................................................................................................................................................................2012.0020100100000
.......................................................................................................CCTGC---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGGGG----------........................................................................................................................................................................................................................................................................................................2212.0020101000000
............................................CTATAC-CT------ATCAGACTAA-GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020100100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCCATGGTTAGGTGGCGCATA................................................2412.0020200000000
................................................................................................................CTGA---GGATTC----------------------------------------------------------------------------------------GAGGGG----------AACGGAA---..............................................................................................................................................................................................................................................................................................2311.0010100000000
.........................................................................................................................................................................................................................................................................................................................AGAAAAA---------------AACC-----ATTGTAGAA............................................................................................................................................................................2011.0010100000000
................................................................................AAA-GAACTAA-----CCAACCCCCTGC---AC............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.................................................................................................................TGA---GGATTC----------------------------------------------------------------------------------------GAGGGG----------AACGGAA---CC............................................................................................................................................................................................................................................................................................2411.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTAGGTGGCGCATAC---------------------T-GTAAG...................2311.0010100000000
...............GAACTTGCTGCATTCATAT-ACAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.................................................................................................CAACCCCCTGC---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGGG...................................................................................................................................................................................................................................................................................................................2711.0010100000000
..................................................................................................................GA---GGATTC----------------------------------------------------------------------------------------GAGGGG----------AACGGAA---CC............................................................................................................................................................................................................................................................................................2311.0010010000000
.......................................................................................................................................................................................................................GGGG----------AACGGAA---CCTCTTCATTCCC.................................................................................................................................................................................................................................................................................2411.0010001000000
..............................................................................................................................................................................................................................................................................................................................AA---------------AACC-----ATTGTAGAAGAAAAT......................................................................................................................................................................2111.0010010000000
........................................................................................TAA-----CCAACCCCCTGC---ACTGA---GGA...................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.......GAG-TGGAGAACTTGCTGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.............................................................................................................................................................................................................................................................................................................................................................AGAAGAAAATAT--ATATAT---------GT.................................................................................................................................................2011.0010000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATGGTTAGGTGGCGCATAC---------------------T-GTA.....................2611.0010100000000
...............................................................GACTAA-GTGTATGTGTAAA-GAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...........................................................................................................C---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGGGG----------AACGG...................................................................................................................................................................................................................................................................................................2311.0010000000010
........................................................................................................CTGC---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGGG...................................................................................................................................................................................................................................................................................................................2011.0010000100000
...................................................CT------ATCAGACTAA-GTGTATGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
..........................................................................................................GC---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGGG...................................................................................................................................................................................................................................................................................................................1811.0010100000000
..........................................................................ATGTGTAAA-GAACTAA-----CCAACCCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................CCCTGC---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGG....................................................................................................................................................................................................................................................................................................................2111.0010000100000
.........................................................................................................................................................................................................................................................................................................................AGAAAAA---------------AACC-----ATTGTAGAAGAAAATAT--..................................................................................................................................................................2811.0010100000000
........................................................................................................................................................................................................................................................................................................................CAGAAAAA---------------AACC-----ATTGTAGAAGAAAATA.....................................................................................................................................................................2811.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGTTAGGTGGCGCATAC---------------------T-GTAA....................2511.0010100000000
..............................................ATAC-CT------ATCAGACTAA-GTGTATGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100000
...............GAACTTGCTGCATTCATAT-ACATATATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
...............GAACTTGCTGCATTCATAT-AC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........TGGAGAACTTGCTGCATTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................................................................................................................CTGA---GGATTC----------------------------------------------------------------------------------------GAGGGG----------AACG....................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCTCTAGGGTTTTGCATCC..................................................................2211.0010100000000
.....................................................................................AACTAA-----CCAACCCCCTGC---ACT...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................AA-GTGTATGTGTAAA-GAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
......................................................................................ACTAA-----CCAACCCCCTGC---ACTGA---G.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
...........................................ACTATAC-CT------ATCAGACTAA-GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
..........................................................................ATGTGTAAA-GAACTAA-----CCAACCCCCTGC---A.............................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
........................................TATACTATAC-CT------ATCAGACTAA-GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..............................................................................GTAAA-GAACTAA-----CCAACCCCCTGC---A.............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................................................................................................CCTGC---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGGG...................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
GAGTG--GAG-TGGAGAACTTGCTGCATTCATAT-ACATATATACTATAC-CT------ATCAGACTAA-GTGTATGTGTAAA-GAACTAA-----ACAACCCCCCGC---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGGGG----------AACGGAA---CCTCTTCATTCCCAT-------------------C------TTTTT-CAATACTTATTAAT---CTT-T--AACAGAAAAA---------------AACC-----ATTGTAGAAGAAAATAT--ATATAT---------GTA--TACAC--ATG--TATA--------TTTGTTTTAAATTT-TATTTTTG-----TTTATTCTCTAGGGTTTTGCATCCATGGTTAGGTGGCGCATAC---------------------T-GTAAGG------------AGAAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................AGACTAA-GTGTATGTGTAAA-G........................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003001002
..............................................................................GTAAA-GAACTAA-----ACAACCCCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003300000
..............................................................................GTAAA-GAACTAA-----ACAACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
.........................................ATACTATAC-CT------ATCAGACTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
...............................................................................................................................................................................................................................................................................................................................A---------------AACC-----ATTGTAGAAGAAAATAT--AT................................................................................................................................................................2411.001000001
.....................................................................................AACTAA-----ACAACCCCCCGC---AC............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........AG-TGGAGAACTTGCTGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................................................................TAAA-GAACTAA-----ACAACCCCCCGC---ACTGA---G.....................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
..................................................................................A-GAACTAA-----ACAACCCCCCGC---..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...................................................CT------ATCAGACTAA-GTGTATGTGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
...................................................................................................ACCCCCCGC---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGG....................................................................................................................................................................................................................................................................................................................2411.001010000
...............................................................................................................................................................................................................................................................................................................................................AACC-----ATTGTAGAAGAAAATAT--ATAT..............................................................................................................................................................2511.001100000
..................................................................................................................................................................................................................................................................................................................................................C-----ATTGTAGAAGAAAATAT--ATATAT---------...................................................................................................................................................2411.001100000
........................................................................................................................................................................................................................................................................................................................CAGAAAAA---------------AACC-----ATTGTAGAAGAAAAT......................................................................................................................................................................2711.001100000
................................................................................................................................................................................................................................................................................................ATACTTATTAAT---CTT-T--AACAGA.................................................................................................................................................................................................................2211.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATCCATGGTTAGGTGGCG....................................................2111.001000001
........................................................................................................CCGC---ACTGA---GGATTC----------------------------------------------------------------------------------------GAGG....................................................................................................................................................................................................................................................................................................................1911.001010000
...........................................ACTATAC-CT------ATCAGACTAA-G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................................ATAC-CT------ATCAGACTAA-GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droWil2
AAAT------------TACTTACTGCATTCTGTT-A--------CTATTG-AT------AGAATTCTAA-GTGTAA---------------------TC-------AC---AATTA---ATGTTA--------------------------------------------------------------------------------------------------------AT---C-----ATATTCATTCCTAG-------------------C------TCTTT-TATAACTTGA-AAT-G-------A---------AGATCA--------------------TTGTGTAATTGTGTATAA---A-----------ATATTTACAA---TTTGTTTATTTTTACAAACGT--TTCTCTT------CAT-----TTTCTTCTCTAGGCTTTGAGTCGCGTGATTAGATGGCGTAACTGA----------------------TAAGG---A--------ACAAGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................GTT-A--------CTATTG-AT------AGAATTCTAA-GTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.00400220
...............................GTT-A--------CTATTG-AT------AGAATTCTAA-GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.00430100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGTAACTGA----------------------TAAGG---A--------AC....2212.00200110
.........................................................................................................................................................................................................................................................................................................AAT-G-------A---------AGATCA--------------------TTGTGTAATTGTGT......................................................................................................................................................................2512.00200110
.........................................................................................................................................................................................................................................................................................................AAT-G-------A---------AGATCA--------------------TTGTGTAATT..........................................................................................................................................................................2111.00100100
............................................CTATTG-AT------AGAATTCTAA-GTGTAA---------------------TC-------AC---..............................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010
.........................................................................................................................................................................................................................................................................................................AAT-G-------A---------AGATCA--------------------TTGTGTAATTGT........................................................................................................................................................................2311.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTGATTAGATGGCGTA..................................................1911.00100100
..............................................................ATTCTAA-GTGTAA---------------------TC-------AC---AATTA---ATGTTA--------------------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................2811.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGAGTCGCGTGATTAGATGGC.....................................................2411.00100001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................T-----TTTCTTCTCTAGGCTTTGAGT.....................................................................2211.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTCTAGGCTTTGAGTCGCGT................................................................2311.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTTTATTTTTACAAACGT--TTCTCTT------C.................................................................................................2711.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGTCGCGTGATTAGATGGC.....................................................2311.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGCTTTGAGTCGCGTG...............................................................1911.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGTAACTGA----------------------TAAGG---A--------A.....2111.00100100
............................................CTATTG-AT------AGAATTCTAA-GTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
AAAT------------TACTTACTGCATTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAGATGGCGTAACTGA----------------------TAAGG---A--------......2511.00100100
....................................................................................................................................................................................................................................................TCATTCCTAG-------------------C------TCTTT-TATAACTTGA-AA..................................................................................................................................................................................................................................2811.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTT------CAT-----TTTCTTCTCTAGGCT...........................................................................2411.00110000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGTCGCGTGATTAGATGGC.....................................................2211.00100100
.....................................................................................................................................................................................................................................................................................................................A---------AGATCA--------------------TTGTGTAATTGTG.......................................................................................................................................................................2011.00100100
..........................................................................................................................................................................................................................................................................................................AT-G-------A---------AGATCA--------------------TTGTGTAATT..........................................................................................................................................................................2011.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCTCTAGGCTTTGAGTCGCGTGA..............................................................2711.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCGTGATTAGATGGCGT...................................................2011.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGATGGCGTAACTGA----------------------TAAGG---A--------ACA...2611.00100001
...............................GTT-A--------CTATTG-AT------AGAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.........................................................................................................................................................................................................................................................................................................AAT-G-------A---------AGATCA--------------------TTGTGTAATTG.........................................................................................................................................................................2211.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAGATGGCGTAACTGA----------------------TAAG...................2311.00100010
............................................CTATTG-AT------AGAATTCTAA-GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...............................................TTG-AT------AGAATTCTAA-GTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGCGTGATTAGATGGC.....................................................2011.00100010
...................................................AT------AGAATTCTAA-GTGTAA---------------------TC-------AC---..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..............................................ATTG-AT------AGAATTCTAA-GTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGTCGCGTGATTAGATGGCGTA..................................................2611.00100100
.AAT------------TACTTACTGCATTCTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGGCTTTGAGTCGCGTGATTAGA.........................................................2611.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGTCGCGTGATTAGATGGCGT...................................................2411.00100010
........................................................................................................................................................................................................................................................TCCTAG-------------------C------TCTTT-TATAACTTGA-....................................................................................................................................................................................................................................2211.00100010
.............................................................................................................................................................................................................................................................G-------------------C------TCTTT-TATAACTTGA-AAT-G-------A---------AGAT..........................................................................................................................................................................................................2611.00100010
droVir3
AAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA--------TATTTTTTATATTT------TCATTT--ATTTTTCTGTAGGCTTTGGGTCGTGTAGCTAAATGGCGTAACTGA-------------------------CA------------AATATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGGCGTAACTGA-------------------------CA------------AAT...2111.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGCTTTGGGTCGTGTAGCTA...........................................................2711.001000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGGCTTTGGGTCGTGTAGC.............................................................2111.001000000000000000000000000000000100000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGTCGTGTAGCTAAATGGCGTA..................................................2611.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGGCGTAACTGA-------------------------CA------------AA....2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGTAGGCTTTGGGTC....................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGTCGTGTAGCTAAATGGCGTAAC................................................2711.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGCTTTGGGTCGTGTAGC.............................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGTCGTGTAGCTAAATG.......................................................2111.001000000010000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGTCGTGTAGCTAAATGG......................................................2111.001000000000100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGCGTAACTGA-------------------------CA------------AAT...2011.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ATTTTTCTGTAGGCTTTGGGT.....................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
droMoj3
CTTTTA-------GAATTCTTTATGCATAAATTT-A---------TACAA-ACATATAAATGTAACTAA-GTGTCTGCTTTAT-A------------CA-------AA---TATGCATT--ATTA-----------------------------------ACATATTTAACACACAG--------CCACACACAAAAACACACATGAAAATTAAAAAAA----------AGC-------AAAGTTCATTCCTAA-------------------C------TTTTT-TGCCGCTCGA----------------------------CTTAGCA-------------------AAAGAATATGT--GTATATTATTTATCAATA--TATATATGTA--TATT--------TTTA-----TATTT------TCATTTATTTTTTTCTATAGACTTTGGGTCGTGTGGCTAAATGGCGTACATAAGAAATTTATTCCAAAATTTA-ATTTAA------------AGTT-ASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................GTAACTAA-GTGTCTGCTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.......................................................................................................................................................................TAACACACAG--------CCACACACAAAAACA.....................................................................................................................................................................................................................................................................................................................................2511.001100000
....................................................................................................................................................................ATTTAACACACAG--------CCACACACA...........................................................................................................................................................................................................................................................................................................................................2211.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTGGGTCGTGTGGCTAAATGGC.....................................................2621.002000002
...........................................................................................................................................................................ACACAG--------CCACACACAAAAACACACATGA..............................................................................................................................................................................................................................................................................................................................2811.001100000
.........................................................AAATGTAACTAA-GTGTCTGCTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................................TTAAAAAAA----------AGC-------AAAGTTCATTCCTAA-------------------C------T....................................................................................................................................................................................................................................................2911.001100000
.......................................................ATAAATGTAACTAA-GTGTCTGCTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................ATATTTAACACACAG--------CCACAC..............................................................................................................................................................................................................................................................................................................................................2111.001100000
CTTTTA-------GAATTCTTTATGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.............................................TACAA-ACATATAAATGTAACTAA-GTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAATGGCGTACATAAGAA..........................................2121.002200000
...............................................................................................................................................................................................................................................AAAGTTCATTCCTAA-------------------C------TTTTT-...............................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAATGGCGTACATAAGAA..........................................2020.501000001
.....................................................................................................................................................................................................................................................................................................................................TTAGCA-------------------AAAGAATATGT--GTATATT...........................................................................................................................................................2420.501100000
.........................................................................................................................................................................................................................................................................................TTTT-TGCCGCTCGA----------------------------CTTAGC...................................................................................................................................................................................................2020.501100000
.....................................................................................................................................................................................................................................................................................................................................TTAGCA-------------------AAAGAATATGT--GT................................................................................................................................................................1920.501000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATAGACTTTGGGTCGTGT................................................................2020.501100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGACTTTGGGTCGTGTGGC.............................................................2120.501100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTATAGACTTTGGGTCGTGT................................................................2220.501000001
.................................................................................................................................................................................................................................................................................C------TTTTT-TGCCGCTCGA----------------------------CTTAGCA-------------------AAAG...........................................................................................................................................................................2720.501100000
..................................................................................................................................................................................................................................................................................................................................................................................ATTTATCAATA--TATATATGTA--TAT...............................................................................................................................2420.501100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGTCGTGTGGCTAAATGGC.....................................................2220.501100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATAAGAAATTTATTCCAAAAT............................2520.501100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATAAGAAATTTATTCCAAA..............................2120.501100000
.....................................................................................................................................................................................................................................................................................................CGA----------------------------CTTAGCA-------------------AAAGAATATGT--GTATA.............................................................................................................................................................2620.501100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAATGGCGTACATAAGAAATT.......................................2420.501100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGACTTTGGGTCGTGTGGCT............................................................2220.501100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTGGGTCGTGTGGCT............................................................1920.501100000
.......................................................................................................................................................................................................................................................................................................................................AGCA-------------------AAAGAATATGT--GTAT..............................................................................................................................................................1920.501100000
..........................................................................................................................................................................................................................................................CTAA-------------------C------TTTTT-TGCCGCTCGA----------------------------C........................................................................................................................................................................................................2120.501000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATTCCAAAATTTA-ATTTAA------------A.....2420.501100000
......................................................................................................................................................................................................................................................................................................GA----------------------------CTTAGCA-------------------AAAGAATATGT--GTAT..............................................................................................................................................................2420.501100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTCGTGTGGCTAAATGGC.....................................................2020.501000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTATAGACTTTGGGTCGTGTGG..............................................................2520.501100000
.........................................................................................................................................................................................................................................................................................TTTT-TGCCGCTCGA----------------------------CTTAGCA-------------------AAA............................................................................................................................................................................2420.501100000
............................................................................................................................................................................................................................................................................................................................................................................................................ATT--------TTTA-----TATTT------TCATTTATTTT.......................................................................................2320.501100000
droGri2
TAT--------------ATTTACTGAATTCAATTTA---------CG-------------TAAATCTAA-GTGTATGTTTAAT-GT-TCAAGCAAAACC------AAA-----AGG---ACACCAACAACAAGAAATGTAAACAAAACTATACATTGATAACGTATTTA---CGCTAACTTTTGTTAACACACACAGACACACATGAAAG-------AGATAATCATTGTG---C----GGATTTCATTCCAAA-------------------C------TTT-TTTGCCCCTTCGTAAG---CTT-T--GATTGAA----------------AGAAGCAAAAAATTGTA---------------------------------T-----AATA--TATA-----------TTTTTATATTT------TCA-----TTTTCTTCGTAGACTTTGGGTCGCTTGGCTAAATGGCGTAACTGA-------------------------AAAAAA------AAAAACAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................ACGTATTTA---CGCTAACTTTTGTTAACA...............................................................................................................................................................................................................................................................................................................................................2711.00110
..................................................................................................................................................................................................................................................TTTCATTCCAAA-------------------C------TTT-TTTGCCCC.........................................................................................................................................................................................................................................2411.00110
.......................................................................................................................................................................................................................................................................................................................ATTGAA----------------AGAAGCAAAAAATTG.................................................................................................................................................................................2111.00110
.............................................CG-------------TAAATCTAA-GTGTATGTTTAAT-GT-T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101

Generated: 05/19/2015 at 01:09 PM