ID:

dsi_16650

 Coordinate:

node_2983:11099-11248 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.7 -21.7 -21.6

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+

Sense Strand Reads

TATGGATTGTTCACAAAATTACTGCAACGGATTGCATATTGTTTTGAATGGTACGAAATCTGGAATATAATAACGCGAGATTACTTAAATAGTACTTGTTTACGAAGCGTGCCTTTGAATTTTTATTTTGGTATACTCGACAAGATCCTGAATGAGAAAGTCTCAGTGGTGGAGTAAAATATTTTTATAGACATAAACGAAGCGCAAGCTTGTTGACTTATGTTGCCACGCCCACTCTAACGCCCACAAC
**************************************************........((((((((((.((..(((((((((.((((..(((..(((((...((.((.(((((...((((....)))).))))).)))))))))...)))..))))..))))))....)))..))...))))))...)))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 M053
female body
 M023
head
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
...................................................................................................................................................................................TATTTTTATAGACATAAACGAAGCGCA............................................ 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0
.....................................................................................................................................TACTCGACAAGATCCTGAATAAGAAAGTC........................................................................................ 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................TTGAATGGTACGAAGTATGGAT......................................................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0
.....................................................................................................................................TACTCGACAAGATCCTGAATAAGAAAGT......................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................GAATGAGAAAGTCTCAGT................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................GAATGAGAAAGTCTCAGTGGTG............................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................ACAAGATCCTTAATGAGAAA........................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0
............ACAAAATTACTGCAACGGATT......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................ACTTATGTTGCCACGCCCACTCTAACGC....... 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTATGTTGCCACGCCCACTCTAACGC....... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................CTCAGTGGTAGAGTA.......................................................................... 15 1 6 0.33 2 0 0 0 0 0 0 1 1 0
............................................................................................................................................................AAACTCTAAGCGGTGGAGTA.......................................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TTTTTGACTTATGTTGCCACGCCCA................ 25 1 5 0.20 1 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................AACTCTAAGCGGTGGAGTA.......................................................................... 19 3 12 0.17 2 0 2 0 0 0 0 0 0 0
.TTGGATTGTTCACAAA......................................................................................................................................................................................................................................... 16 1 7 0.14 1 1 0 0 0 0 0 0 0 0
................................................................................................TGTTTACGGAACGTACCTT....................................................................................................................................... 19 3 8 0.13 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGTTGCCACGCCCACTCTAACGCCCA.... 26 0 20 0.10 2 0 0 0 1 0 0 1 0 0
..........................................................................................................................................................................................................................TATGTTGCCACGCCCACTCTAACGC....... 25 0 10 0.10 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGTTGCCACGCCCACTCTAACGCCCACA.. 28 0 20 0.10 2 0 0 0 0 0 0 0 1 1
.......................................................................................................................................................ATGAGAAACTCTAAGCGGT................................................................................ 19 3 12 0.08 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................AAACTCTAAGCGGTGGAGT........................................................................... 19 3 13 0.08 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGTTGCCACGCCCACTCTAACGC....... 23 0 20 0.05 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................AGTCACGATCCTGAATGA............................................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................ACGAATCGTGACTTTGAAA.................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................AACGAAGCGAAAGCT........................................ 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................AGTGGTGGAGTAAAAC...................................................................... 16 1 20 0.05 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

ATACCTAACAAGTGTTTTAATGACGTTGCCTAACGTATAACAAAACTTACCATGCTTTAGACCTTATATTATTGCGCTCTAATGAATTTATCATGAACAAATGCTTCGCACGGAAACTTAAAAATAAAACCATATGAGCTGTTCTAGGACTTACTCTTTCAGAGTCACCACCTCATTTTATAAAAATATCTGTATTTGCTTCGCGTTCGAACAACTGAATACAACGGTGCGGGTGAGATTGCGGGTGTTG
**************************************************........((((((((((.((..(((((((((.((((..(((..(((((...((.((.(((((...((((....)))).))))).)))))))))...)))..))))..))))))....)))..))...))))))...)))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M024
male body
.......................................................................................................................................................................................................................TGAATACAACGGTGCGGGTGAGATTG......... 26 0 2 3.00 6 0 3 3 0 0 0 0
......................................................................................................................................................................................................................CTGAATACAACGGTGCGGGTGAGATTG......... 27 0 2 2.00 4 0 1 3 0 0 0 0
....................................................................................................................................................................................................................AACTGAATACAACGGTGCGGGTGAGAT........... 27 0 2 1.50 3 3 0 0 0 0 0 0
.............................................................................................................................AAAACCATATGAGCTGTTCTAGGACT................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0
........................................................................TGCGCTCTAATGAATTTATCATGAA......................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0
...................................................................................................CTTGCTTAGCACGGAAACTTAAAA............................................................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................ATGAGCTGTTCTAGGACTTACTCTT............................................................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................ATGCTTAGCACGGAAACTTAAAAAT............................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ATGCTTAGCACGGAAACTTAAAAA.............................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
...............................................TACCATGCTTTAGACCTTAT....................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................ATATGAGCTGTTCTAGGACTTACT............................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0
................................................................................................................................................................AGAGTCACCACATCATTTTATAAAAATAT............................................................. 29 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................GGGCTGTTCTAGGAGTTA................................................................................................. 18 2 5 0.80 4 0 0 0 0 0 0 4
..........................................................................................................................................................................................................................ATACAACGGTGCGGGTGAGATTG......... 23 0 10 0.60 6 0 0 4 2 0 0 0
......................................................................................................................................................................................................................CTGAATACAACGGTGCGGGTGAGAT........... 25 0 2 0.50 1 0 0 0 0 1 0 0
..................................................................................................................................................................................................................ACAACTGAATACAACGGTGCGGGTGAGAT........... 29 0 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................GAATACAACGGTGCGGGTGAGATTG......... 25 0 2 0.50 1 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................TGAATACAACGGTGCGGGTGAGAT........... 24 0 2 0.50 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................AATACAACGGTGCGGGTGAGATTGCG....... 26 0 3 0.33 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................................ACAACTGAATACAACGGTGCGGGT................ 24 0 4 0.25 1 0 0 0 0 1 0 0
..........................................................................................................................................................................................................................ATACAACGGTGCGGGTGAGATTGC........ 24 0 10 0.20 2 0 0 0 2 0 0 0
........................................................................................................................................................................................................................TAATACAACGGTGCGGGTGAGATTG......... 25 1 6 0.17 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................ATACAACGGTGAGGGTGAGATTG......... 23 1 12 0.17 2 0 2 0 0 0 0 0
.........................................................................................................................................................................................................................AAAACAACGGTGCGGGTGAGATTG......... 24 1 7 0.14 1 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................AAAACAACGGTGCGGGTGAGAT........... 22 1 9 0.11 1 0 1 0 0 0 0 0
..................................................................................................................................................................................TAAAAAAACATCTGTATTTGAT.................................................. 22 3 10 0.10 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................AACAACGGTGCGGGTGAGATTGCGGGT.... 27 1 20 0.10 2 0 0 0 0 2 0 0
..........................................................................................................................................................................................................................ATACAACGGTGCGGGTGAGATTGCG....... 25 0 10 0.10 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................................ACAACGGTGCGGGTGAGATTGCGGGT.... 26 0 20 0.10 2 0 1 0 0 0 1 0
.................................................................................................................................................................................................................................GGTGCGGGTGAGATTGCGGGT.... 21 0 20 0.10 2 0 2 0 0 0 0 0
..........................................................................................................................................................................................................................ATACAACGGTACGAATGAGATTGCGGGT.... 28 3 12 0.08 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................ATTCAACGGGGCGGGTGAGATTG......... 23 2 17 0.06 1 0 1 0 0 0 0 0
................................................................................................................................................................................................................................CGGTGCGGGTGAGATTGCGGGTGT.. 24 0 20 0.05 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................AACGGTGCGGGTGAGATTGCGGGT.... 24 0 20 0.05 1 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................GCGGGTGAGATTGCGGGTGT.. 20 0 20 0.05 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................TACAACGGTGCGGGTGAGATTGCGGGT.... 27 0 20 0.05 1 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................GGTGAGATTGCGGGTGT.. 17 0 20 0.05 1 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 node_2983:11049-11298 + dsi_16650 TATGGATTGTTCACAAAATTACTGCAACGGATTGCATATTGTTTTGAATGGTACGAAATCTG-------------------------------------------------------------------GAATATAA---------------------------------TAACGCGAGATTACTTAAATAGTACTTGTTTACGAAGCGTGCCTTTGAA-TTTTTA----------------------------------TTTTGGT----ATACTCGACAAGATCCTGAATGAGAAAGTCTCAGTGGT-----GGAGTAAAATATTT------------------TTAT-----------------------AGACATAAACGAAGCGCAAGCTTGTTGACTTATGTTGCCACGCCCACTCTAACGCCCACAA----C
droSec2 scaffold_57:164806-165029 - TATGGATTGTTCACAAAAATACTGCAACGGATTGCATATTGTTTTGAATGGTAC------------------------------------------------------------------------------------------------------------------------------TTACTTAAATAGTACTTGTTTACGAATCGTGCCTTTGAA-TTTTTA----------------------------------TTTTGGT----ATACTCGACAAGATCCTGAATGAGAAAGTCTCAGTGGT-----GGAGTAAAATATTT------------------TTAT-----------------------AGACATAGACGAAGCGAAAGCTTGTTGACTTATGTTGCCACGCCCACTATAACGCCCACAA----C
dm3 chr2RHet:1848935-1849258 - TATGGATTGTTCACAAAAATACTGCAAAGGATTGCATATTGTTTTGAAAGGTACAAAAGCTGAAGTGACCCTCTCTGAAA---------TCAGAGCGG-----GCGACACA---AGAAATACGTTTGCGGAATATAATAAGATTAATAAAAATATAATAATAAGATAAGATAATTAGAGATTACTTAAATAGTACTTGTTTACGAATTGTGCCGTTGTA-TTTTTA----------------------------------TCTTGGT----ATACTCGGCAAGATCATGAATGAGAAAGTCTCAGTGGT-----GGAGTAAGATATTT------------------TTATACCCGTTACACATTTAAAAAATGTT----------------TAGATTT----------TTCTTCGTTTAATTGTTTGTC----------
droEre2 scaffold_4845:253312-253556 - TATGTATTGATTAAG--ATT---ACAAAAGAAAAC-TGTTATATCGTATGGTCCAATAATTATACCAGGTTACTCGTAAAGTTTAAATTTCAATGAAAAGAATGCAATAGGTAAAATTAAACGTTTCCGA---------------------------------------------------------------------------------------------ACATATAAATATAATATATAAATTCTTG----------ATCAGAATTAATAGCGGAGTAGATCTGGGACGTCGAGATCTCAGGAACTATAA----------------------------------------------------------------------AAGCTAAAAGTTTTTGACCCATGTAGCCACGCCA-----------CAAAA----C
droYak3 v2_chr3L_random_283:18248-18456 + GT---------------------------------ATATTAATTTGTAAGTTACAAAATTAATAT------------------AGATTT---------------------------------------------------------------------------------GAACTAGAGCTTAGAATAAC--------ATTTCGA--CGTGGGAACTAATTTTTAC----------------------------------TTTTTGA----TTACTTCACACGTTCCTTCA-------AATTCAATATA-----GAATTTGATTATTT------------------GTATACCCGTTACTCGTAGAGTAAAAGGG----------------TATATGTTGACCCATGTTGCCACGCCAAGTTTAACGTCCACAA----A
droEug1 scf7180000408193:452316-452413 - GA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTAGGAAGTTGAGATTAAGCATGAAGATTT------------T-----------TGAGGTCCATACGCAGCGCAAGTTTCTTTCCGCATCCTGCTACGCTTACTCTAACGCCCACAA----A
droBia1 scf7180000302144:1444-1689 + CTGGAATATATTACG--AATATTGCAAAATTTTTTA-----------------------------------------------TAAATTGCTCTTATTAAAACGCG--------------------------------------------------------------------------------------------T---TGAAATTTGCCTAT--A-TTTATATTTAAGTGTGTAACAGGAATTCTGTCTGTCCGTTCGTCCGT----A---------------TGAACGCAGAGATCTCGGAAGCTATAAGGGCTAAAATATTCATACTTGGCATGAAGATTC------------C-----------TGGGCTTCCTGCGTAGCGCAAGTTTGTTTCAGCGGGGTGCCACGCCCACTCTAACGCCCACAA----T
droTak1 scf7180000415338:94725-94803 + TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTGT-----AGAGTAAAAGGGTT------------------TT-------------------------------CTACGCAGCGCAAGTTTGTTTCTGCCGACGGCCACGCCTCCTCTAACGCCCATAA-----
droEle1 scf7180000491286:15766-15814 - A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCAAGTTTATTTTAAAACGGAGCCACGCCCACTTTAACGCCCACAA-----
droRho1 scf7180000778484:24674-24816 - TGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTG-TCTGTC----------------------------------TGTCCGT----ATGAA---------------CGCTGAGATCTCGGAAACTATAAAAGCTAGAAGATTGG----------GTAGATTT------------T-----------AGGAGTTCCTACGCAGCGCAAGTTTGTTTCAAAATGGTGCCACGTCCCCTCTGACGCCCACAAGCAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TATGGATTGTTCACAAAATTACTGCAACGGATTGCATATTGTTTTGAATGGTACGAAATCTG-------------------------------------------------------------------GAATATAA---------------------------------TAACGCGAGATTACTTAAATAGTACTTGTTTACGAAGCGTGCCTTTGAA-TTTTTA----------------------------------TTTTGGT----ATACTCGACAAGATCCTGAATGAGAAAGTCTCAGTGGT-----GGAGTAAAATATTT------------------TTAT-----------------------AGACATAAACGAAGCGCAAGCTTGTTGACTTATGTTGCCACGCCCACTCTAACGCCCACAA----CSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................TATTT------------------TTAT-----------------------AGACATAAACGAAGCGCA................................................2712.00200000000000020000
................................................................................................................................................................................................................................................................................................GAATGAGAAAGTCTCAGT.....................................................................................................................................1811.00100000000001000000
................................................................................................................................................................................................................................................................................................GAATGAGAAAGTCTCAGTGGT-----G............................................................................................................................2211.00100000000001000000
............ACAAAATTACTGCAACGGATT......................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................ACTTATGTTGCCACGCCCACTCTAACGC...........2820.50100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTATGTTGCCACGCCCACTCTAACGC...........2630.33100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGCCACGCCCACTCTAACGCCCA........26200.10200010000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGTTGCCACGCCCACTCTAACGC...........25100.10100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGCCACGCCCACTCTAACGCCCACA......28200.10200000010010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGCCACGCCCACTCTAACGC...........23200.05100000000000010000
...............................................................................................................................................................................................................................................................................................................AGTGGT-----GGAGTAAAAC...................................................................................................................16200.05100000000001000000
droSec2
TATGGATTGTTCACAAAAATACTGCAACGGATTGCATATTGTTTTGAATGGTAC------------------------------------------------------------------------------------------------------------------------------TTACTTAAATAGTACTTGTTTACGAATCGTGCCTTTGAA-TTTTTA----------------------------------TTTTGGT----ATACTCGACAAGATCCTGAATGAGAAAGTCTCAGTGGT-----GGAGTAAAATATTT------------------TTAT-----------------------AGACATAGACGAAGCGAAAGCTTGTTGACTTATGTTGCCACGCCCACTATAACGCCCACAA----CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
TATGGATTGTTCACAAAAATACTGCAAAGGATTGCATATTGTTTTGAAAGGTACAAAAGCTGAAGTGACCCTCTCTGAAA---------TCAGAGCGG-----GCGACACA---AGAAATACGTTTGCGGAATATAATAAGATTAATAAAAATATAATAATAAGATAAGATAATTAGAGATTACTTAAATAGTACTTGTTTACGAATTGTGCCGTTGTA-TTTTTA----------------------------------TCTTGGT----ATACTCGGCAAGATCATGAATGAGAAAGTCTCAGTGGT-----GGAGTAAGATATTT------------------TTATACCCGTTACACATTTAAAAAATGTT----------------TAGATTT----------TTCTTCGTTTAATTGTTTGTC----------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................TACGAATTGTGCCGTTGTA-TTTTTA----------------------------------...................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000000000000110000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TATGGATTGTTCACAAAAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TCATGAATGAGAAAGTCTCAGTGGT-----G............................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................AGTGACCCTCTCTGAAA---------TCAGAGCGG-----................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TTGTGCCGTTGTA-TTTTTA----------------------------------TCTTGG.............................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TCAGTGGT-----GGAGTAAGATATTT------------------TTA..........................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TGAATGAGAAAGTCTCAGTGGT-----GGAG.........................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000
...................................................TACAAAAGCTGAAGTGACCCTCTCTGA.........................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................TTTGCGGAATATAATAAGATTAAT....................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TGAAGTGACCCTCTCTGAAA---------TCAGAGCG......................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................GCGG-----GCGACACA---AGAAATACGTT..........................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TTGGT----ATACTCGGCAAGATCATGAAT...................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TCTCTGAAA---------TCAGAGCGG-----GCGACACA---.....................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................TATAATAATAAGATAAGATA...........................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TACTCGGCAAGATCATGAATGAGAAAG............................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..TGGATTGTTCACAAAAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................CAAGATCATGAATGAGAAAGTCTCAT......................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TTGTGCCGTTGTA-TTTTTA----------------------------------TCTTGGT----A.......................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TACGTTTGCGGAATATAATAAGAT........................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................GGTACAAAAGCTGAAGTGACC.................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................AGATATTT------------------TTATACCCGTTAC................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TACTTGTTTACGAATTGTGCCGTTG..............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TACGTTTGCGGAATATAATAAGATT.......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GCTGAAGTGACCCTCTCTGAAA---------TCAGAA........................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TTTTGAAAGGTACAAAAGCTGAAGTGA...................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TGAGAAAGTCTCAGTGGT-----GGA..........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TAATTAGAGATTACTTAAATAGTACT...................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TCTCAGTGGT-----GGAGTAAGATATTT------------------.............................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................AAAGGATTGCATATTGTTTTGAAAGG....................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TTACGAATTGTGCCGTTGTA-TTTTTA----------------------------------...................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TACTCGGCAAGATCATGAAT...................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................ATAATAAGATAAGATAATTAGT.....................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TTTTTA----------------------------------TCTTGGT----ATACTCGG................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGGT----ATACTCGGCAAGATCATG......................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................TTGAAAGGTACAAAAGCTGAAGTGACC.................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TCTTGGT----ATACTCGGCAAGATCATGA.....................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................TGTTTTGAAAGGTACAAAAGCTGAAG......................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................AATTGTGCCGTTGTA-TTTTTA----------------------------------...................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TGAGAAAGTCTCAGTGGT-----GGAGTAAGA....................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................TTGAAAGGTACAAAAGCTGAA.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................TGTTTTGAAAGGTACAAAAGCTGAAGT.....................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................TGCGGAATATAATAAGATTAATAAAA................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGGT----ATACTCGGCAAGATCATGAA....................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................GATTACTTAAATAGTACTTGTTTACGAAT........................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TCTCAGTGGT-----GGAGTAAGAT...................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TTTAAAAAATGTT----------------TAGATTT----------TTCTTCG........................2711.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TGTA-TTTTTA----------------------------------TCTTGGT----ATACTCGG................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................ATACTCGGCAAGATCATGAAT...................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TATGGATTGTTCACAAAAATACTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CTCTCTGAAA---------TCAGAGCGG-----GC..............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................ATCATGAATGAGAAAGTCTCAGTGGT-----G............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGTCTCAGTGGT-----GGAGTAAGATA..................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTTGCGGAATATAATAAGATT.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........TCACAAAAATACTGCAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ATAAGATAATTAGAGATTACT..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................ACGAATTGTGCCGTTGTA-TTTTTA----------------------------------...................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAAAGGATTGCATATTGTTTTGAAAGG....................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TACGAATTGTGCCGTTGTA-TTTTTA----------------------------------TC.................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TTGGT----ATACTCGGCAAGATCATGAATGA.................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TAAGATATTT------------------TTATACCCGT...................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AGAAAGTCTCAGTGGT-----GGAGT........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........CACAAAAATACTGCAAAGGATTGCATC.................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TCAGAGCGG-----GCGACACA---AGA..................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GT----ATACTCGGCAAGATCATG......................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TCTTGGT----ATACTCGGCAAGATCATGAA....................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TATTGTTTTGAAAGGTACAAAAGC...........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TAAGATAATTAGAGATTACT..............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TTTACGAATTGTGCCGTTGTA-TTTTTA----------------------------------...................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................ACTCGGCAAGATCATGAATGAGAAAGT...........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................G-----GCGACACA---AGAAATACGTTTGCGGA....................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TTGTGCCGTTGTA-TTTTTA----------------------------------TC.................................................................................................................................................................................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CTTGGT----ATACTCGGCAAGATCATGAA....................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................TTGCGGAATATAATAAGA.........................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................GCGG-----GCGACACA---AGAAATACGTTTGC.......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................ATACCCGTTACACATTTAAA.......................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TGAAGTGACCCTCTCTGAAA---------TCAGAGC.......................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AA---------TCAGAGCGG-----GCGACACA---AGAAA................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TTGGT----ATACTCGGCAAGATCATGAA....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TTTTA----------------------------------TCTTGGT----ATACTCGGCAAG............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CTTGGT----ATACTCGGCAAGATCATGA.....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................TGAATGAGAAAGTCTCAGTGGT-----.............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TCTCTGAAA---------TCAGAGCGG-----GCGT............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AAAGTCTCAGTGGT-----GGATC........................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TTTAAAAAATGTT----------------TAGATTT----------T..............................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AAAATGTT----------------TAGATTT----------TTCTTC.........................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AATGTT----------------TAGATTT----------TTCTTCGT.......................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TATGTATTGATTAAG--ATT---ACAAAAGAAAAC-TGTTATATCGTATGGTCCAATAATTATACCAGGTTACTCGTAAAGTTTAAATTTCAATGAAAAGAATGCAATAGGTAAAATTAAACGTTTCCGA---------------------------------------------------------------------------------------------ACATATAAATATAATATATAAATTCTTG----------ATCAGAATTAATAGCGGAGTAGATCTGGGACGTCGAGATCTCAGGAACTATAA----------------------------------------------------------------------AAGCTAAAAGTTTTTGACCCATGTAGCCACGCCA-----------CAAAA----CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
GT---------------------------------ATATTAATTTGTAAGTTACAAAATTAATAT------------------AGATTT---------------------------------------------------------------------------------GAACTAGAGCTTAGAATAAC--------ATTTCGA--CGTGGGAACTAATTTTTAC----------------------------------TTTTTGA----TTACTTCACACGTTCCTTCA-------AATTCAATATA-----GAATTTGATTATTT------------------GTATACCCGTTACTCGTAGAGTAAAAGGG----------------TATATGTTGACCCATGTTGCCACGCCAAGTTTAACGTCCACAA----ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................TTATTT------------------GTATACCCGTTACT...............................................................................2070.14101000000000
.......................................................................................................................................................................................................................................................................................................................................T------------------GTATACCCGTTACTCGTAGAGTAA.....................................................................25160.06100100000000
.......................................................................................................................................................................................................................................................................................................................................T------------------GTATACCCGTTACTCGTAGAGTA......................................................................24160.06100100000000
.....................................................................................................................................................................................................................................................................................................................................TTT------------------GTATACCCGTTACTCGTAGAG........................................................................24170.06101000000000
..........................................................................................................................................................................................................................................................................................................................................................GTATACCCGTTACTCGTAGAG........................................................................21200.05101000000000
droEug1
GA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTAGGAAGTTGAGATTAAGCATGAAGATTT------------T-----------TGAGGTCCATACGCAGCGCAAGTTTCTTTCCGCATCCTGCTACGCTTACTCTAACGCCCACAA----ASizeHit CountTotal NormTotal
No Reads
droBia1
CTGGAATATATTACG--AATATTGCAAAATTTTTTA-----------------------------------------------TAAATTGCTCTTATTAAAACGCG--------------------------------------------------------------------------------------------T---TGAAATTTGCCTAT--A-TTTATATTTAAGTGTGTAACAGGAATTCTGTCTGTCCGTTCGTCCGT----A---------------TGAACGCAGAGATCTCGGAAGCTATAAGGGCTAAAATATTCATACTTGGCATGAAGATTC------------C-----------TGGGCTTCCTGCGTAGCGCAAGTTTGTTTCAGCGGGGTGCCACGCCCACTCTAACGCCCACAA----TSizeHit CountTotal NormTotal
No Reads
droTak1
TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTGT-----AGAGTAAAAGGGTT------------------TT-------------------------------CTACGCAGCGCAAGTTTGTTTCTGCCGACGGCCACGCCTCCTCTAACGCCCATAA-----SizeHit CountTotal NormTotal
No Reads
droEle1
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCAAGTTTATTTTAAAACGGAGCCACGCCCACTTTAACGCCCACAA-----SizeHit CountTotal NormTotal
No Reads
droRho1
TGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCTG-TCTGTC----------------------------------TGTCCGT----ATGAA---------------CGCTGAGATCTCGGAAACTATAAAAGCTAGAAGATTGG----------GTAGATTT------------T-----------AGGAGTTCCTACGCAGCGCAAGTTTGTTTCAAAATGGTGCCACGTCCCCTCTGACGCCCACAAGCAGCSizeHit CountTotal NormTotal
No Reads

Generated: 05/19/2015 at 03:57 PM