ID:

dsi_16609

 Coordinate:

2l:3554577-3555004 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.8 -23.8 -23.7

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GAACCGAATTGTTTCCTAGCAACACCTGAAGCTAATTTAATTAGTTAAAGGTACTTCCTATTTTCAGATATTTTCAGTCTATATAAACCTGCTTCCATTTTCTTTGTGTTGTTTCACTCATTGCTAATGAGATCGTTTTGTGCTTTTGTATTATTATTTACCCTTTTAGGGATTGTGATGGCATATAGAGATTGTAAGTGCTATGAATAACACTTTTACTCAGTCTTTTTAATTTCACTTAGCTCCTGACAAGTGCTATCAGTCCCCTCGGTCTTATGGACCTTGTAATGTCAAGGCCCATGGATACACCTATGATTCTCGTAGAAATGTATGTCGTCGAATTGTTCTTCGGTGTATGGCAAGGGGCAACTATTTCTTTGACAAAGAATCCTGCGAATACACATGCTTAAAGTATATTCAGTAACATAAATGTTTGTACATGCCCTAAGGATGCATTTGTTATTAGAAAGTAAGAACAGACTATGAAATACAATTATAATAATATTAATATTCAAATATCGACTATGA
*********************************************************************************************************************************************************************************************************************................((((((.((.((((..((....)).))))..((.((....)).))(((((.(((((......))))).))))).(((((.((((((...))))))...)))))...)).))))))**************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR618934
dsim w501 ovaries
 O001
Testis
 M024
male body		 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
...........................................................................................................................................................................................................................................................................................................................................................TTCGGTGTATGGCAGGGGGCA................................................................................................................................................................ 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTTTACTCAGTCTTTTTAATT...................................................................................................................................................................................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................GAAATGTATGTCGTCGAATTG........................................................................................................................................................................................ 21 0 1 3.00 3 2 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................................AAAGAATCCTGCTAAT.................................................................................................................................. 16 1 5 3.00 15 0 15 0 0 0 0 0 0 0
........................................................................................................................TTGCTAATGAGATCGTTTTGTG.................................................................................................................................................................................................................................................................................................................................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................CTTTTAGGGATTGTGATGGCA......................................................................................................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................CGTAGAAATGTATGTCGTCGA............................................................................................................................................................................................ 21 0 1 2.00 2 1 0 0 1 0 0 0 0 0
.........................................................................................................................TGCTAATGAGATCGTTTTGTG.................................................................................................................................................................................................................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................TAGAAATGTATGTCGTCGAA........................................................................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................CTTTTAGGGATTGTGATGGC.......................................................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................TTTTAGGGATTGTGATGGCAT........................................................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................TGTTCTTCGGTGTATGGCAAG..................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ATGAATAACACTTTTACTCAG................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................ATTGTGATGGCATGTAGAGAT................................................................................................................................................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................TTCGGTGTATGGCAAGGGGCAT............................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................TGAGATCGTTTTGTGCTATT............................................................................................................................................................................................................................................................................................................................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................TGTTCTTCGGTGTATGGCAGG..................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................TCTTCGGTGTATGGCAAGGGG.................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................ATTGCTAATGAGATCGTTTTG.................................................................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................CTTGTAGAAATGTATGTCGTC.............................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................TTTTAGGGATTGTGATGGCATA....................................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................CCTATGATTCTCGTAGAAATG....................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................AAATGTATGTCGTCGAATTGT....................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................TTCTTCGGTGTATGGCAAGGG................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................TTGTTCTTCGGTGTATGGCAA...................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................CATATAGAGATTGTAAGTGCT...................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................TCGTAGAAATGTATGTCGTCG............................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................GTAGAGGTGTATGTCGTCGAA........................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................CGTAGAAATTTATGTCGTCGAATTG........................................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AGGGATTGTGATGGCATATAG.................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................TTGTATTATTATTTACCC............................................................................................................................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................TGGAATGTCAAGACCTATGGAT............................................................................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................ATGAGATCGTTCTGT................................................................................................................................................................................................................................................................................................................................................................................................... 15 1 4 0.25 1 0 0 0 0 0 1 0 0 0
..............................................................................................................................CTGAGATCGATTGGTGCTTTT............................................................................................................................................................................................................................................................................................................................................................................................. 21 3 5 0.20 1 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................................................................................................................GTCAAATTGTTCGTCCGTGT............................................................................................................................................................................. 20 3 6 0.17 1 0 0 0 0 0 1 0 0 0
.............................................................................................................................AATGTGATCGTTGTGTGC................................................................................................................................................................................................................................................................................................................................................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 0 1 0
............................................................................................................................................TGCTTTTGTATTGTTA.................................................................................................................................................................................................................................................................................................................................................................................... 16 1 12 0.08 1 0 0 0 0 0 1 0 0 0
...............................................................................................................................TGAGATCATTTTGTTTTTTTGT........................................................................................................................................................................................................................................................................................................................................................................................... 22 3 13 0.08 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................................ATTCACATATGATTCACGTA............................................................................................................................................................................................................. 20 3 14 0.07 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................................................AAAGAATCCTGCTAA................................................................................................................................... 15 1 15 0.07 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTATTAGAAAGTAAAAAAA.................................................. 22 3 17 0.06 1 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................................................................................................................................................................................................................................TCCACATGCTTAGAGT................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................TTCGCGGTATGGCAAG..................................................................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

CTTGGCTTAACAAAGGATCGTTGTGGACTTCGATTAAATTAATCAATTTCCATGAAGGATAAAAGTCTATAAAAGTCAGATATATTTGGACGAAGGTAAAAGAAACACAACAAAGTGAGTAACGATTACTCTAGCAAAACACGAAAACATAATAATAAATGGGAAAATCCCTAACACTACCGTATATCTCTAACATTCACGATACTTATTGTGAAAATGAGTCAGAAAAATTAAAGTGAATCGAGGACTGTTCACGATAGTCAGGGGAGCCAGAATACCTGGAACATTACAGTTCCGGGTACCTATGTGGATACTAAGAGCATCTTTACATACAGCAGCTTAACAAGAAGCCACATACCGTTCCCCGTTGATAAAGAAACTGTTTCTTAGGACGCTTATGTGTACGAATTTCATATAAGTCATTGTATTTACAAACATGTACGGGATTCCTACGTAAACAATAATCTTTCATTCTTGTCTGATACTTTATGTTAATATTATTATAATTATAAGTTTATAGCTGATACT
****************************************************************************************************************************************************************************************................((((((.((.((((..((....)).))))..((.((....)).))(((((.(((((......))))).))))).(((((.((((((...))))))...)))))...)).))))))********************************************************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR902009
testis
 M025
embryo
 M024
male body		 SRR618934
dsim w501 ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
.................................................................................................................................................................................................................................................CGAGGACTGTTCACGATA............................................................................................................................................................................................................................................................................. 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................TACAGTTCCGGGTACCTATGT............................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CTTATTGTGAAAATGAGTCAGA.............................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................AACAAGAAGCCACATACCGTA...................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTCCTACGTAAACAAT.................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTCCTACGTAAACAA................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATTCTTGTCTGATACTTT........................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................TCACGATAGTCAGGGGAGCCA................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................ACTAAGAGCATCTTTACATAC................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................AAATCGAGGACTGTTCACGATA............................................................................................................................................................................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAATAATCTTTCATTC...................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................AACAAGAAGCCACATACCGTT...................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................ATAGTCAGGGGAGCCAGAATAC.......................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................CATCTTTACATACAGCAGCTT........................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................AAGTTCCCCGTTGATAAAGAAAC.................................................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................................GGTAAAAGAAACACAA.................................................................................................................................................................................................................................................................................................................................................................................................................................. 16 0 2 0.50 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................TGAGAAGCCACATACCGTT...................................................................................................................................................................... 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGTAATCATTCATT....................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1
.........................................................................AGTCAGCTAAATCTGGACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGATTGTATTTAC................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0
..AGGCTTAACAAAGGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0
..................CTTTGTGGACTTCGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTGATACTTTATGCT................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:3554527-3555054 + dsi_16609 GAACCGAATTGTTTC-------------CTAGCAACACCTGAAGCTAATTTAATTAGTTAAAGGTACTTCCTATTTTCAGATATTTTCAGTCTATATAAACCTGCTTCCATTTTCTTTGTGTTGTT-------TCACTCATTGCTAATGAGATCGTTTTGTGCTTTTGTATTATTATTTACCCTTTTAGGGATTGTGATGGCATATAGAGATTGTAAGTGC-TATGAATAACACTTTTACTCAGTCT--TTTTAATTTCACTTAGCTCCTGACAAGTGCTATCAGTCCCCTCGGTCTTATGGACCTTGTAATGTCAAGGCCCATGGATACACCTATGATTCTCGTAGAAATGTATGTCGTCGAATTGTTCTTCGGTGTATGGCAAGGGGCAACTATTTCTTTGACAAAGAATCCTGCGAATACACATGCTTAAAGT---ATATTCAGT--AACATAAATG-TTTGTACATGCCCTAAGGATGCATTTGTTATTAGAAAGTAAGAACAGACT--------------ATGAAA-TACAATTATAA---------------TAATAT----TA-ATATTCAAATATCGACTATGA
droSec2 scaffold_5:1797021-1797552 + GAACAGAATTGTTTT-------------CTAGCAACACCTGAAGCTAATTTAATTAGTTAAAGGTACTTCCTATTTTCAGATATTTTCAGTCTATATAAACCTGCTTCCATTTTCTTTGTGTTGTT-------TCACTCATTGCTAATGAGATCGTTTTGTGCTTTTGTATTATTATTTACCCTTTTAGGGATTGTGATGGCATATAGAGATTGTAAGTGC-TAAGAATAACACTTTTACTCAGTCT--TTTTAATTTCACTTAGCTCCTGACAAGTGCTATCAGTCCCCTCGGTCTTATGGACCTTGTAATGTTAAGGCCCATGGATACACCTATGATTCTCGTAGAAATGTATGTCGTCGAATTGTCCTTCGGTGTATGGCAAGTGGCAACTATTTCTTTGACAAAGAATCCTGCGAATACACATGCTTAAAGT---ATATTCAGT--GACATAAATG-ATTGTACATGCCCTAATGATGCATTTGTTATTAGAAAGTAAGAACAGACT--------------ATGAAA-TACAATTATAA---------------TAATATGTATAA-ATATTCACATAACTACTATGA
dm3 chr2L:3701181-3701714 + GAACCTATTTGTTTT-------------CTAGCAACACCTGAAGCTAATTTAATTAGTTAAAGGTACTTCCTATTTCCAGATATTTTCACTCTATATAAACCTGATGCCATTTTTTTTGTGTTTAT-------TCACTCATTGCTAATGAGATCGTTTTGTGTGTCTGTCTTATTAGTTACCCTTTTGGGGATTGCGATGGCATATAGAGATTGTAAGTAC-TATGAATAACATTTTTACTCAGTCT--TTTATATTTCACTTAGATTCGGAGAAGTGCTATCAATCCCCTCGGTCTTATGGACCTTGTAATGTTAAGGCCCATGGATACACTTATGATTCTCGTAGAAATGTATGTCGTCGAATTGTTCTTCGGTGTATGGCAAGGGGTAACTATTTCTTTGACAAAGATTCCTGCGAATACACATGCTTAAAGC---ATATTCAGTAGAAGAAAAATA-TTTGTACATGCGCCAATGATGCATTTGTTATTAGAAAGTAAGAACAGACT--------------ATGAAA-TACAATTATAA---------------TAATATGTATAA-ATATTCATATGACGACTATGA
droEre2 scaffold_4929:3743653-3744197 + GAACCGAATTGTTTTACAGACGAATCT-CTAGTAACTCCTGGAACTAATTTTCTTAATTA-T-----------------GGTGTTTCTGGTCTTTAAAAACGTACTGCCATTTGATCAGAGTTTTTATATTCCTCAATCATTGCCAATGAGTTCGTTTTGCGTTTCTTTTCTTTTAATAACCCTTTTAGGGATTGTGATGTCATATAGAGATCGTAAGTGCCTAACAGTAACACATTTATTCAGTCT--CTTTAATTTTACTTAGTTTCGGCCAAGTGCAAACTGTTCCCTTTATCTTATGGATTTTGTAAAATTAGCGCTCGAGGATTTTCTTATGATGCTCGTAGGAATGTGTGTCATCGAGTTGTTCTTCGGTGTATGGGAAGGGATAATTTTTTCTTTGACCAAGATTCCTGCGAATCAGCATGCTTAAAGAAAAAAAATAAGT--AACACGAATGTTTTGTACATACTTTAATGTTGCATTGTTGATTAAAAAGTAAGAACAGGCTGAAGACATTTTTTAATGAAT-T--------AA---------------AAATATATATAAGATATTCATGTAATGATTAAGA
droYak3 2L:3697730-3698272 + GAACCACATTGTTTTGCAGACGCATTTACATTTAACACGTGAAACTAATTTTATTATTTTAT-----------------TTTATTTATGGTCTTTTAAAAAGTTCACCCATTTGATCTGAGTTTTT-------ATTTGTTTCACCAATGAGTTCGTTTTGCGTTTCTTTCTTAATAATAACCCTTTTAGGGGTTGTGATGACTTATAGAGATCGTAAGTGC-TAACAATAACACTTTTATTCAGTCT--TTTTAATTTTACTTAGTTTCGTACAAGTGCAAACTGAACCCTAGATCTTATGGATTTTGTAAAATTCAGGCTCGAGGATTTTCTTATGATCGTTATAGGAAATTATGCCGTCGAAATGTTCTTCGGTGTATGGGAACGGATAACTTTTTCTTTGACCAAGAGTCCTGCGAAGAAGCATGCTTAAAGCCAAAAACTAATT--AACACAAATGTTTTGTACATACTTCAAAGATTTAAAGGTTATAATGAATGAAGAATAAATA--------------AATAAATTACAAATACACAAATTGGTGTTAAATAAAAATGTAGAA-ATA-----AAATCGATAATTA
droTak1 scf7180000415709:162541-162660 - A-------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATCAATTTCCGTTGCTTTTCTATTATTAAGTTTTTTCAGTTTTACCATGACCCAAAAAAATCGTAAGTGT-TAAAAAAAAGAATTTTTTGCAATAATATATTTATTTCTTTTAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302270:901621-901674 - AAGTTGAAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT--------------TGAAAA-TAAAATTATAC---------------TAAAATAACTAG-ATTTT----------TTATGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAACCGAATTGTTTC-------------CTAGCAACACCTGAAGCTAATTTAATTAGTTAAAGGTACTTCCTATTTTCAGATATTTTCAGTCTATATAAACCTGCTTCCATTTTCTTTGTGTTGTT-------TCACTCATTGCTAATGAGATCGTTTTGTGCTTTTGTATTATTATTTACCCTTTTAGGGATTGTGATGGCATATAGAGATTGTAAGTGC-TATGAATAACACTTTTACTCAGTCT--TTTTAATTTCACTTAGCTCCTGACAAGTGCTATCAGTCCCCTCGGTCTTATGGACCTTGTAATGTCAAGGCCCATGGATACACCTATGATTCTCGTAGAAATGTATGTCGTCGAATTGTTCTTCGGTGTATGGCAAGGGGCAACTATTTCTTTGACAAAGAATCCTGCGAATACACATGCTTAAAGT---ATATTCAGT--AACATAAATG-TTTGTACATGCCCTAAGGATGCATTTGTTATTAGAAAGTAAGAACAGACT--------------ATGAAA-TACAATTATAA---------------TAATAT----TA-ATATTCAAATATCGACTATGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................TTTTACTCAGTCT--TTTTAATT...............................................................................................................................................................................................................................................................................................................................................2113.00300000000000003000
..........................................................................................................................................................................................................................................................................................................................................................GAAATGTATGTCGTCGAATTG.................................................................................................................................................................................................................................2113.00300001000000002000
............................................................................................................................................TTGCTAATGAGATCGTTTTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200000000000002000
......................................................................................................................................................................................CTTTTAGGGATTGTGATGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000000002000
......................................................................................................................................................................................................................................................................................................................................................CGTAGAAATGTATGTCGTCGA.....................................................................................................................................................................................................................................2112.00201000000000001000
.............................................................................................................................................TGCTAATGAGATCGTTTTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000000002000
........................................................................................................................................................................................................................................................................................................................................................TAGAAATGTATGTCGTCGAA....................................................................................................................................................................................................................................2012.00200000000000002000
......................................................................................................................................................................................CTTTTAGGGATTGTGATGGC......................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
.......................................................................................................................................................................................TTTTAGGGATTGTGATGGCAT....................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................TGTTCTTCGGTGTATGGCAAG..............................................................................................................................................................................................................2111.00100000000000001000
...............................................................................................................................................................................................................................ATGAATAACACTTTTACTCAG............................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TTCGGTGTATGGCAAGGGGCAT........................................................................................................................................................................................................2211.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................................TCTTCGGTGTATGGCAAGGGG...........................................................................................................................................................................................................2111.00100000000000001000
...........................................................................................................................................ATTGCTAATGAGATCGTTTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.......................................................................................................................................................................................TTTTAGGGATTGTGATGGCATA...................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................CCTATGATTCTCGTAGAAATG................................................................................................................................................................................................................................................2111.00100001000000000000
...........................................................................................................................................................................................................................................................................................................................................................AAATGTATGTCGTCGAATTGT................................................................................................................................................................................................................................2111.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................TTCTTCGGTGTATGGCAAGGG............................................................................................................................................................................................................2111.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................................TTGTTCTTCGGTGTATGGCAA...............................................................................................................................................................................................................2111.00100000000000001000
.........................................................................................................................................................................................................CATATAGAGATTGTAAGTGC-T.................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................TCGTAGAAATGTATGTCGTCG......................................................................................................................................................................................................................................2111.00100000000000001000
...........................................................................................................................................................................................AGGGATTGTGATGGCATATAG................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.....................................................................................................................................................................TTGTATTATTATTTACCC.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
droSec2
GAACAGAATTGTTTT-------------CTAGCAACACCTGAAGCTAATTTAATTAGTTAAAGGTACTTCCTATTTTCAGATATTTTCAGTCTATATAAACCTGCTTCCATTTTCTTTGTGTTGTT-------TCACTCATTGCTAATGAGATCGTTTTGTGCTTTTGTATTATTATTTACCCTTTTAGGGATTGTGATGGCATATAGAGATTGTAAGTGC-TAAGAATAACACTTTTACTCAGTCT--TTTTAATTTCACTTAGCTCCTGACAAGTGCTATCAGTCCCCTCGGTCTTATGGACCTTGTAATGTTAAGGCCCATGGATACACCTATGATTCTCGTAGAAATGTATGTCGTCGAATTGTCCTTCGGTGTATGGCAAGTGGCAACTATTTCTTTGACAAAGAATCCTGCGAATACACATGCTTAAAGT---ATATTCAGT--GACATAAATG-ATTGTACATGCCCTAATGATGCATTTGTTATTAGAAAGTAAGAACAGACT--------------ATGAAA-TACAATTATAA---------------TAATATGTATAA-ATATTCACATAACTACTATGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................CTTATGGACCTTGTAATGTTA....................................................................................................................................................................................................................................................................................2111.0010100
...........................................................................................................................................................................................................................................................................................................................................................................ATTGTCCTTCGGTGTATGGCA................................................................................................................................................................................................................2111.0010100
...............................................................................................................................................................................................ATTGTGATGGCATATAGAGAT............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
dm3
GAACCTATTTGTTTT-------------CTAGCAACACCTGAAGCTAATTTAATTAGTTAAAGGTACTTCCTATTTCCAGATATTTTCACTCTATATAAACCTGATGCCATTTTTTTTGTGTTTAT-------TCACTCATTGCTAATGAGATCGTTTTGTGTGTCTGTCTTATTAGTTACCCTTTTGGGGATTGCGATGGCATATAGAGATTGTAAGTAC-TATGAATAACATTTTTACTCAGTCT--TTTATATTTCACTTAGATTCGGAGAAGTGCTATCAATCCCCTCGGTCTTATGGACCTTGTAATGTTAAGGCCCATGGATACACTTATGATTCTCGTAGAAATGTATGTCGTCGAATTGTTCTTCGGTGTATGGCAAGGGGTAACTATTTCTTTGACAAAGATTCCTGCGAATACACATGCTTAAAGC---ATATTCAGTAGAAGAAAAATA-TTTGTACATGCGCCAATGATGCATTTGTTATTAGAAAGTAAGAACAGACT--------------ATGAAA-TACAATTATAA---------------TAATATGTATAA-ATATTCATATGACGACTATGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................ATACACTTATGATTCTCGTAG.....................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AATTGTTCTTCGGTGTATGGC.................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000020000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGCGAATACACATGCTT.................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TTCTTCGGTGTATGGCAAGGG............................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TGAGATCGTTTTGTGTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................1931.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTGTTCTTCGGTGTATGGC.................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................GATGGCATATAGAGATTG..........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATA-TTTGTACATGCGCC.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CATTGCTAATGAGATCGTTTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TATGGACCTTGTAATGTTAAG..................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CCTTTTGGGGATTGCGATGGC......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................ATGTTAAGGCCCATGGATAC......................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TTAGTTACCCTTTTGGGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTTATGGACCTTGTAATGTTA....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AGGGGTAACTATTTCTTTGAC...........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTAGAAAGTAAGAACAGACT--------------...................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GAATTGTTCTTCGGTGTATGG..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CTTATGATTCTCGTAGAAATG................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TTCGGTGTATGGCAAGGG............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TCGTTTTGTGTGTCTGTCTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TAATGAGATCGTTTTGTGTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTACATGCGCCAATGATGC.............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TT-------------CTAGCAACACCTGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTGTTCTTCGGTGTATGGCAA...............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TGGCATATAGAGATTGTAAGT.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................................................................................................................................................................................................................................................GTATGTCGTCGAATTGTTCTT............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CTAATGAGATCGTTTTGTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................CGATGGCATATAGAGATTGTA........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GAATTGTTCTTCGGTGTATGGCA................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GAATTGTTCTTCGGTGTATGGC.................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TGTCGTCGAATTGTTCTTCGGT........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GATTCCTGCGAATACACATGC...................................................................................................................................................................2111.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-TTTGTACATGCGCCAA...................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................ATATTTCACTTAGATTCGGAGAA.............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TTCACTTAGATTCGGAGAAGT...........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.............................................................................................................................................................................................................................................................TATTTCACTTAGATTCGGAGA..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTGCTAATGAGATCGTTTTGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GAACCGAATTGTTTTACAGACGAATCT-CTAGTAACTCCTGGAACTAATTTTCTTAATTA-T-----------------GGTGTTTCTGGTCTTTAAAAACGTACTGCCATTTGATCAGAGTTTTTATATTCCTCAATCATTGCCAATGAGTTCGTTTTGCGTTTCTTTTCTTTTAATAACCCTTTTAGGGATTGTGATGTCATATAGAGATCGTAAGTGCCTAACAGTAACACATTTATTCAGTCT--CTTTAATTTTACTTAGTTTCGGCCAAGTGCAAACTGTTCCCTTTATCTTATGGATTTTGTAAAATTAGCGCTCGAGGATTTTCTTATGATGCTCGTAGGAATGTGTGTCATCGAGTTGTTCTTCGGTGTATGGGAAGGGATAATTTTTTCTTTGACCAAGATTCCTGCGAATCAGCATGCTTAAAGAAAAAAAATAAGT--AACACGAATGTTTTGTACATACTTTAATGTTGCATTGTTGATTAAAAAGTAAGAACAGGCTGAAGACATTTTTTAATGAAT-T--------AA---------------AAATATATATAAGATATTCATGTAATGATTAAGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................ATTGTGATGTCATATAGAGAT............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
droYak3
GAACCACATTGTTTTGCAGACGCATTTACATTTAACACGTGAAACTAATTTTATTATTTTAT-----------------TTTATTTATGGTCTTTTAAAAAGTTCACCCATTTGATCTGAGTTTTT-------ATTTGTTTCACCAATGAGTTCGTTTTGCGTTTCTTTCTTAATAATAACCCTTTTAGGGGTTGTGATGACTTATAGAGATCGTAAGTGC-TAACAATAACACTTTTATTCAGTCT--TTTTAATTTTACTTAGTTTCGTACAAGTGCAAACTGAACCCTAGATCTTATGGATTTTGTAAAATTCAGGCTCGAGGATTTTCTTATGATCGTTATAGGAAATTATGCCGTCGAAATGTTCTTCGGTGTATGGGAACGGATAACTTTTTCTTTGACCAAGAGTCCTGCGAAGAAGCATGCTTAAAGCCAAAAACTAATT--AACACAAATGTTTTGTACATACTTCAAAGATTTAAAGGTTATAATGAATGAAGAATAAATA--------------AATAAATTACAAATACACAAATTGGTGTTAAATAAAAATGTAGAA-ATA-----AAATCGATAATTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droTak1
A-------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATCAATTTCCGTTGCTTTTCTATTATTAAGTTTTTTCAGTTTTACCATGACCCAAAAAAATCGTAAGTGT-TAAAAAAAAGAATTTTTTGCAATAATATATTTATTTCTTTTAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AAGTTGAAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT--------------TGAAAA-TAAAATTATAC---------------TAAAATAACTAG-ATTTT----------TTATGASizeHit CountTotal NormTotal
No Reads

Generated: 05/19/2015 at 11:00 AM