ID:

dsi_16596

 Coordinate:

2r:15294319-15294468 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.6 -8.2 -7.7 -7.6

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CGTAACGACAACCAGCAATGGCAACAACGACAAGGAGCAGGCGGAAGTTGGTAATGGACATTGAACATTATTAAGACTCTCGTGCGTAGCCCCCTAAGTCTAGGTTAACTCCAAGTATCGATTATCGAATTAAGCGTTGATGAAAACTGAACTTGAAACGTTGTCATGAAATACAATACAATACCGATACAACAATACACTTAGTCATTTCCGTAGATCATCCATCCATTTGCAGGCCCGAAAAAGAAAA
************************************************************.....................((....................((((((....(((.((((...)))))))....)))))).........))************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M023
head
 SRR902008
ovaries
 M024
male body		 O002
Head
 M025
embryo
 M053
female body
 O001
Testis
 GSM343915
embryo
....................................................................................................................................AGCGTTGATGAAAACTGAAC.................................................................................................. 20 0 1 82.00 82 49 13 17 0 0 2 0 0 1 0 0 0 0
....................................................................................................................................AGCGTTGATGAAAACTGAACT................................................................................................. 21 0 1 11.00 11 1 2 5 0 0 2 0 0 0 1 0 0 0
....................................................................................................................................AGCGTTGATGAAAACTGAA................................................................................................... 19 0 1 5.00 5 2 1 2 0 0 0 0 0 0 0 0 0 0
............................................................TTGAACATTATTAAGACTCTCGTGCGT................................................................................................................................................................... 27 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TGTCATGAAATACAATACAATACCGA............................................................... 26 0 1 3.00 3 0 1 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TTGATGAAAACTGAACTTGAAACGT......................................................................................... 25 0 1 3.00 3 0 0 1 1 0 0 0 1 0 0 0 0 0
............................................................................................................................TCGAATTAAGCGTTGATGAAAACTGA.................................................................................................... 26 0 1 3.00 3 0 0 1 0 0 0 2 0 0 0 0 0 0
..................................................................................................................................TAAGCGTTGATGAAAACTGAACTTGAAA............................................................................................ 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................GAACATTATTAAGACTCTCGT....................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................AGCGTTGATGAAAACTGAAA.................................................................................................. 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TTGGTAATGGACATTGAAC........................................................................................................................................................................................ 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTAACTCCAAGTATCGATTATCGAAT........................................................................................................................ 26 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0 0 0
............................................................TTGAACATTATTAAGACTCTCGTGC..................................................................................................................................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AAGCGTTGATGAAAACTGAACT................................................................................................. 22 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
...................................................................................................................................AAGCGTTGATGAAAACTGAAC.................................................................................................. 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................CGTGCGTAGCCCCCTAAGTCTAGGTT................................................................................................................................................ 26 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0
................................................................................................................................ATTAAGCGTTGATGAAAACTGAACT................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................TATCGATTATCGAATTAAGCGTT................................................................................................................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGAACTTGAAACGTTGTCATGAAA............................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTTGATGAAAACTGAACTTGAAACGT......................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................GTCATGAAATACAATACAATACCGA............................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................AGCGTTGATGAAAACT...................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGAACTTGAAACGTTGTCATGAAATACAA.......................................................................... 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................AGCGTTGATGAAAACTGAACTTGA.............................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AAACTGAACTTGAAACGTTGT...................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................GAATTAAGCGTTGATGAAAACTGAAC.................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TCGTGCGTAGCCCCCTAAGTCTAGGT................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................AACTCCAAGTATCGATTATCGAATTA...................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TTGATGAAAACTGAACTTGAAACGTT........................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................AGGCGGAAGTTGGTAATGGACATTGAA......................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................CATCGATTATCGAATTAAGCGTTGAT............................................................................................................. 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................TGCGTAGCCCCCTAAGTCTAGGTT................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................GATGAAAACTGAACTTGAAACGTTGT...................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTAAGCGTTGATGAAAACTGAACTT................................................................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTTGATGAAAACTGAA................................................................................................... 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................TGGCAACAACGACAAGGAGCAGGCGG.............................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................TAAGCGTTGATGAAAACT...................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................TGGTAATGGACATTGAACAT...................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......ACAACCAGCAATGGCAACAA............................................................................................................................................................................................................................... 20 0 2 1.00 2 0 0 0 0 0 0 0 0 0 0 0 2 0
......................................................................................................................................................................................................ACTTAGTCATTTCCGTAGA................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
......................AACAACGACAAGGAGCAGGCGGAAGT.......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................TGGACATTGAACATTATTAAGACTC........................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................TCGAATTAAGCGTTGATGAAAACTGAAC.................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTTGATGAAAACTGAACTTGAAA............................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................TAAGACTCTCGTGCGTAGCCCC............................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................TAAGCGTTGATGAAAACTGAACTTGAA............................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................GCCCCCTAAGTCTAGGT................................................................................................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................AGCAGGCGGAAGTTGGTAATGGACA.............................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................ATTAAGACTCTCGTGCGTAGCCCCC............................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................AAAACTGAACATGCAACGTTGG...................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................GAAACGTTGTCATGAA................................................................................ 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GATGAAAACTGAACTTG............................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TTGAACATTATTAAGACT............................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................TTAAGCGTTGATGAAAACTGAACT................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................AATTAAGCGTTGATGAAAACT...................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................ATTAAGCGTTGATGA........................................................................................................... 15 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................GGTAATGGACATTGAACA....................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................AATACAATACCGATACAACAAAAAA................................................... 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................AAGCGTTGATGAAAACTGAACTTGA.............................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................AATGGACATTGAACATT..................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGAAAACTGAACTTGAAACGTTGTCA.................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................TGGTAATGGACATTGAA......................................................................................................................................................................................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGAAAACTGAACTTGAAACGTTGTCATG.................................................................................. 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................TGAAATACAATACAATACCGA............................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................TAAGACTCTCGTGCGTAGC................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................AGGCGGAAGTTGGTAATGGACT.............................................................................................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................ATGAAAACTGAACTTGAAACG.......................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................TGAAATACAATACAATACCGAT.............................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................CATTATTAAGACTCTCGTGCGTAGCCCC............................................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................TCATGAAATACAATACAATACCGAT.............................................................. 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................AACGACAAGGAGCAGGCGGAAGTTG........................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................CTCGTGCGTAGCCCCCTAAGTCTAGGT................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GATTATCGAATTAAGCGTTGAT............................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................AACTGAACTTGAAACGTTGTCATG.................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................AATGGACATTGAACATTATTAAGACTC........................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AAACTGAACTTGAAAC........................................................................................... 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TAAGACTGTCGTGCAAAGCC............................................................................................................................................................... 20 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1
................AATGGCAACAACGACAAGGA...................................................................................................................................................................................................................... 20 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0
................AATGGCAACAACGACAAGGAG..................................................................................................................................................................................................................... 21 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................CGATTCTGGAATTAAGCCT................................................................................................................. 19 3 12 0.33 4 0 0 0 4 0 0 0 0 0 0 0 0 0
........................................................................AAGACTCTCGTGCGC................................................................................................................................................................... 15 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................GAGCAGGCGGAAGTTG........................................................................................................................................................................................................ 16 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GCGTAGATGAAAACT...................................................................................................... 15 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................AACTTAAAACGTTGATATGAA................................................................................ 21 3 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................TCGTCATTTCCGTAGGT................................ 17 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................ATTGAACATTGTTTAGAC............................................................................................................................................................................. 18 2 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................AACTGAACTTGAAACC.......................................................................................... 16 1 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................TGAACATTATCAAGA.............................................................................................................................................................................. 15 1 17 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................AAGGAACAGGCGGTAGTTT........................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................GTTGAAACGTTGTTATG.................................................................................. 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................CAAGTATCGTTTATCTAAG........................................................................................................................ 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GCATTGCTGTTGGTCGTTACCGTTGTTGCTGTTCCTCGTCCGCCTTCAACCATTACCTGTAACTTGTAATAATTCTGAGAGCACGCATCGGGGGATTCAGATCCAATTGAGGTTCATAGCTAATAGCTTAATTCGCAACTACTTTTGACTTGAACTTTGCAACAGTACTTTATGTTATGTTATGGCTATGTTGTTATGTGAATCAGTAAAGGCATCTAGTAGGTAGGTAAACGTCCGGGCTTTTTCTTTT
**************************************************************************************************.....................((....................((((((....(((.((((...)))))))....)))))).........))************************************************************ 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
......CTGTTGGTCGTTACCGTTGT................................................................................................................................................................................................................................ 20 0 3 0.67 2 2 0 0 0 0
...TTGCTGTTGGTCGTTACCGTT.................................................................................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0
...................CCGTTGTTGCTGTTCCTCGTC.................................................................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0
...................CCGTTGTTGCTGTTCCTCGT................................................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0
................TTACCGTTGTTGCTGTTCCT...................................................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0
..............CGTTACCGTTGTTGCTGTTCCT...................................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
.................TACCGTTGTTGCTGTTCCTCG.................................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
................TTACCGTTGTTGCTGTTCCTC..................................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
GCATTGCTGTTGGTCGTTA....................................................................................................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0
GCATTGCTGTTGGTCGTT........................................................................................................................................................................................................................................ 18 0 2 0.50 1 1 0 0 0 0
............GTCGTTACCGTTGTTGCTG........................................................................................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0
....................CGTTGTTGCTGTTCCTCGT................................................................................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0
................................................................................................TCATATCCAATTGAGGTG........................................................................................................................................ 18 2 3 0.33 1 0 0 1 0 0
................................................ACCATTCCATCTAACTTGTAA..................................................................................................................................................................................... 21 3 3 0.33 1 0 1 0 0 0
................................................ACCATTCCATCTAACTTGTA...................................................................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0
......................................................................................................CCAATTGAGGTTCGT..................................................................................................................................... 15 1 7 0.14 1 0 0 0 1 0
....................................................................TTAATTCTCAGAGCAC...................................................................................................................................................................... 16 2 20 0.10 2 0 0 0 0 2
.....................................................................................................................................................................................................GTGAATCAATAAAGGAAT................................... 18 2 16 0.06 1 0 0 0 1 0
................................................ACCATTCCCTCTAACTTAT....................................................................................................................................................................................... 19 3 19 0.05 1 0 1 0 0 0
......................................................................................................CCAATCGAGTTGCATAGC.................................................................................................................................. 18 3 20 0.05 1 0 0 1 0 0
....................................................................TTAATTCTCAGAGCACG..................................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:15294269-15294518 - dsi_16596 CG-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------------AT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGAATTAAGCGTTGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACAACAATACAC------------------------------------------------------------------------------------------------------------TTAGTCATTTCCGTAGATCA-------------------------------TCCAT--CCA--------------------------TTTGCAG-GCCC-----------GAA-AAA--------------GAAAA
droSec2 scaffold_1:12154591-12154840 - CG-------TAA---CGACAA------CC---AGCATTGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------------AT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGAATTAAGCGTTGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACAACTATACAC------------------------------------------------------------------------------------------------------------TTAGTCATTTCCGTAGATCA-------------------------------TCCAT--CCA--------------------------TTTGCAG-GCCC-----------GAA-AAA--------------GAAAA
dm3 chr2R:14645755-14646005 - CA-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGATGTTGGTAATGGACATTGAAC------------------AT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGAATTAAGCGTTGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACAACAATACAC------------------------------------------------------------------------------------------------------------TTAGTCATTTCCGTAGATCA-------------------------------TCCAT--TCA--------------------------TTTGCAG-GCCC-----------GAA-AAC-------------GAAAAA
droEre2 scaffold_4845:8837537-8837824 - CG-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------------AT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGAATTAAGCGTTGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACAACAATACACCAA-A-ACTCG-----------------T--GCTCGAGAACTCGAC---------TCAGT-----------------------------------------------------CATTTCCATAGATCA-------------------------------TCCAT--TCA--------------------------TTTGCAG-GCCA-----------GAT-AAAGAAATTCAAAATGCG-AAA
droYak3 2R:14551597-14551875 + CG-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------------AT----TATTAAGACTCTTGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGAATTAAGCGTTGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GTTGCAACAATACACCAA-A-ACTCG-----------------TCTCCTCGAGAACTCGAC---------TCAGT-----------------------------------------------------CATTTCCGTAGATCA-------------------------------TCCAT--TCA--------------------------TTTGCAG-GCCC-----------CAA-AACG------------AACAAA
droEug1 scf7180000409663:706891-707151 + CA-------TAA---AGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTTTAACTCCAAGTATCGATTATCGATTTAAGCGTAGATG---------AAAAACTGAACTTAAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACACCAATATAT-A---------------------------------GAGA----GA--------ATTCAGT-----------------------------------------------------CATTTCCGTAGATC--------------------------CATCCATCCAT--CCA--------------------------TTTGCAG-GCCC-------------------------------------
droBia1 scf7180000302292:1747046-1747308 + TG-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGATTTAAGCGTAGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACAA----ACAC-C------CCG--------------------CCTCGAGAACTCGAT---------TCAGT-----------------------------------------------------CATTTCCGTAGATCA-------------------------------TCCACCATCA--------------------------TTTGCGG-GC------------------------------------AGA
droTak1 scf7180000415991:70221-70487 - CG-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGAATATCGATTTAAGCGTAGATG---------AAA-ACTGAACTTAAAA---------------------------------CGT-TGTCATGATGAAATACAATACAATACC-----GATACAA---T-----------------------------------CCTCGAGAACTCGAT---------TCAGT-----------------------------------------------------CATTTCCGTAGATCA-------------------------------TCCAT--CCA--------------------------TTTGCGG-GCCC-----------GAA-AC--------------AAAAAA
droEle1 scf7180000491228:332022-332294 + CG-------TAA---AGACAA------CC---AGCAATGGAAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGATTTAAGCGTAGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACTGCAACACAC-AA-A-GCTCG-----------------T--GC--------TCGAT--------CTCAGTCATT-----------------------------------------------GTCATTTCCGTAGCTCA-------------------------------TCCAT--CCA--------------------------T-TGCAG-GTCC-----------GAA--------------------AAA
droRho1 scf7180000766409:118160-118439 + CA-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGAA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGTCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGAATTAAGCGTAGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACTACAATACAC-AA-A-GCTCG-----------------T--GGTTGCGAACTCCAT---------TCAGTCATT-----------------------------------------------ATCATTTCCGTAGATCA-------------------------------TCTAT--CCA--------------------------T-TGCAG-GATC-----------GA--------------------AAAA
droFic1 scf7180000453811:318425-318699 + CG-------TAA---CGACAA------CC---AGCAACGGCAACAAAGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGATATTGAAC------------TTGAACCT----TATTAAGACTCGCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTGCAAGTATCGCATATCGAATTAAGCGTAGATG---------AAA-ACTGAACTTAAAA---------------------------------CGT-TGTCATGATGAAATACAATACAATACC-----GATACAACAATACAA-AA-A--C------GAAACACAGGTTCTT--GC-------------------------------------------------------------------------------------TCGTAGATCA----------------------------------AT--CCA--------------------------TTTGCAG-GACT--CCCCCCC--AAAAAC--------------ATAAAA
droKik1 scf7180000302682:342889-343132 - AGGCTCATCTAA---CGACAT------CCTCGAGCAATGGGGACAAGGACG---CGGTGCA---GGAGCCGGCGGCAGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATTAAGACTCTCGTGCA----------------------------------------------------------------------------------------------------CA----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGAATATCGATTTAAGCGTAGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAAAACC-----AACAT--------AA-AACA-------------------------------------------------------------------------------AGC-----------------------------TATCGTAGATCA-------------------------------TTCAT--T-----------------------------------------------------------------------------
droAna3 scaffold_13266:17718623-17718872 + CA-------CCA---TCCCAGCACCAAAT---ACCAATGGCAGCAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATT-AGACTCTCGTG------------------------------------------------------------------------------------------------------CA----------TAGCCCCCTAAGA-TTAGGTT-AATCCCAAGTATCGATTACCGATTTAAGCGTAGATG---------AAAAACTGAACTTGAAA---------------------------------CCC-TGTCAT---GAAATACAATACAATACACTATGGTTACCACAAAACTCAAA-A-GTTCG-----------------T--ACTCGTTACCTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA-TG--------------GGTATA
droBip1 scf7180000396735:987977-988257 + CA-------CCA---TCACAGCACCCAAT---ACCAATGGCAGCAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATT-AGACTCTCGTG------------------------------------------------------------------------------------------------------CA----------TAGCCCCCTAAGA-TTAGGTT-AATCCCAAGTATCGATTACCGATTTAAGCGTAGATG---------AAACACTGAACTTGAAA---------------------------------CCT-TGTCAT---GAAATACAATACAATACACTATGGTTACCACAAAA----------CTCGAATGTA-----------T--GCT--------CAGTAGTAGGAATTCA-------------------------------GATACTCTTCTTGTGT--------CTTTT-----------------------------------------------------------------------------------G-GCCC-----------CTG-AC--------------CTCGAA
dp5 3:3405367-3405702 + CG-------CCA---CGACAA------CC---AGCAATGGCGGCCACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTAAAC------------T-----GT----TATTAAGACGCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGC-CTAGGTT-AACACC-AGTATCGAATATCGA-TTAAGCGTAGATG---------AA--ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATAAC-----GATAC--CAATACAC-AATATACTC-----------------------CCGAGA--TCGAT---------TCAGTCATTGCTAGTGCCAGATCTAA--------GGGGATCTCCCAGTGGATCTTGGCCATATCCATCGTCCA-------------------TCAA--------TCCAT--CCATCCAGCCATCTGTCATTCCGTCCAGTTTTGCAG-----------------TA-TAC--------------GAAAA
droPer2 scaffold_2:3598548-3598891 + CG-------CCA---CGACAA------CC---AGCAATGGCGGCCACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTAAAC------------T-----GT----TATTAAGACGCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGC-CTAGGTT-AACACC-AGTATCGAATATCGA-TTAAGCGTAGATG---------AA--ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATAAC-----GATAC--CAATACAC-AATATACTC-----------------------CCGAGA--TCGAT---------TCAGTCATTGCTAGTGCCAGATCTAA--------GGGGATCTCCCAGTGGATCTTGGCCATATCCATCGTCCA-------------------TCAATCCATCCATCCAT--CCATCCAGCCATCTGTCATTCCGTCCAGTTTTGCAG-----------------TA-TAC--------------GAAAA
droWil2 scf2_1100000004510:2121557-2121862 - CA-------CGA---CCACAATTATCACC---AGCAATGG------CGACA---AGGAGCATCAGCAGACGACGACGGAAGTTGGTAATGGACATTGAAC------------T-----GTTGT-TATT-AGACTCTCTTGTT----------------------------------------------------------------------------------------------------CG----------TAGCCTCCTAAGT-CTAGATTTTACACCAAGTATCGAATATCGATTTAAGCGTAGATGGAATGAAAGAAA-ACTGAACTTGAAA---------------------------------CATTTGTCAT---GAAATACAATACAAAAAC-----AA-ACTATAAAA----------------------------------------GAAATC-------------C--------------------AAAAAGAATTGAT------------------TTATATACATTTG---ATCGACTGAGAACATCCTTACCATGCACCCATATATCCAT--TCA--------------------------T----------C-----------G----------------------AAC
droVir3 scaffold_12875:14067916-14068242 + GG-------CAAAGCCGGCCA------CA---ATCAATGGCACCACCGAAA---AGGAGCA------------GACGGAAGTTGGTAATGGACATTGAATCCTCTATCTAACT-----GTTGTTTATT-AGACACACAA----------ATACACACACAAACACACGCACACACACAAACACACACAGATCCCCTCT-----GCA----------------------------------TATATAGACACACCTAAG-T-CTAAGCCCTAGTTT-AATGGAAAGTATCGATTAACGATTTAAGCGAT---A---------AGA------TTTTGAAG-----T-----TTTTGGTGGATGAAACGATAAACGA-TAAACT---GAAATACAGAATAATAAT-----TGTG--------------------------------------------------------------------------------------------------------------------------------CCCAGAAACCA-------------------------------GTCCT--TTA--------------------------TTTGCTTTGTCC---AA-CC---G-------------------AAAGAG
droMoj3 scaffold_6496:9513237-9513349 + C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTCCTAGTTT-AATAGCAAGTATCGATTAACGATTTAAGTCTA--AG---------AAT-TT---TTTTGAAG-----TTTTCTTTTTGATAGTTGAAA-------CGA-TAAACT---GAAATACATAATAATAAT-----AATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:17168500-17168896 - AA-------AGC---CGATTA------CT---GTCAATGGCAGCAATGGCAGCAGCGAGCA------------GGCGGAACTTGGTAATGGACACTGAAA------------T-----GT----TCTTAATATTTAGATACACATACACAAGCACACACAAACACA--CACACACACAAACACATACACGTCCCCTTTCCCTTGCACACTCTATTCCGCTCTCTTCTCACTCCCTGTCTCTGTATGCACACACCTAGG-TGCTAAGT-CTAGTTTAAATTGAAAGTATCGATTAACGATTTAAGCG---ATA---------ACA-ATTTAAGTCTAAACGTTTTTTTTTTTTTGGAAGCTGAAACGA-----------AAT---GCGATAAACTGAAATACA-----GAAATAATTGTG--------------------------------------------------------------------------CCAAAAAAAAAGAAGCTAG------------------TTATTCATTTTTG-----------------------------------------------A--------------------------TTTTTGT-GCCCCCCCCCCCCACAAA-AA--------------AAAAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CG-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------------AT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGAATTAAGCGTTGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACAACAATACAC------------------------------------------------------------------------------------------------------------TTAGTCATTTCCGTAGATCA-------------------------------TCCAT--CCA--------------------------TTTGCAG-GCCC-----------GAA-AAA--------------GAAAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................AGCGTTGATG---------AAA-ACTGAAC..............................................................................................................................................................................................................................................................................................................................................20182.008220000113170049000000
..............................................................................................................................................................................................................................................................................................................AGCGTTGATG---------AAA-ACTGAACT.............................................................................................................................................................................................................................................................................................................................................21111.001120100025001000000
..............................................................................................................................................................................................................................................................................................................AGCGTTGATG---------AAA-ACTGAA...............................................................................................................................................................................................................................................................................................................................................1915.00500000012002000000
..............................................................................................TTGAAC------------------AT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------T...........................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000020001000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGTCAT---GAAATACAATACAATACC-----GA.................................................................................................................................................................................................................................................................2613.00300000012000000000
..................................................................................................................................................................................................................................................................................................................TTGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-...................................................................................................................................................................................................................................................................................................2513.00301000001100000000
......................................................................................................................................................................................................................................................................................................TCGAATTAAGCGTTGATG---------AAA-ACTGA................................................................................................................................................................................................................................................................................................................................................2613.00300000001000020000
............................................................................................................................................................................................................................................................................................................TAAGCGTTGATG---------AAA-ACTGAACTTGAAA---------------------------------.......................................................................................................................................................................................................................................................................................................2812.00200000020000000000
................................................................................................GAAC------------------AT----TATTAAGACTCTCGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000000000
..............................................................................................................................................................................................................................................................................................................AGCGTTGATG---------AAA-ACTGAAA..............................................................................................................................................................................................................................................................................................................................................2012.00200000000002000000
.................................................................................TTGGTAATGGACATTGAAC------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200000020000000000
.................................................................................................................................................................................................................................................................................TT-AACTCCAAGTATCGATTATCGAAT..............................................................................................................................................................................................................................................................................................................................................................................2612.00200000010000010000
..............................................................................................TTGAAC------------------AT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000020000000000
.............................................................................................................................................................................................................................................................................................................AAGCGTTGATG---------AAA-ACTGAACT.............................................................................................................................................................................................................................................................................................................................................2212.00220000000000000000
.............................................................................................................................................................................................................................................................................................................AAGCGTTGATG---------AAA-ACTGAAC..............................................................................................................................................................................................................................................................................................................................................2112.00200000001001000000
........................................................................................................................................CGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-......................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000020000000
..........................................................................................................................................................................................................................................................................................................ATTAAGCGTTGATG---------AAA-ACTGAACT.............................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
.............................................................................................................................................................................................................................................................................................TATCGATTATCGAATTAAGCGTT......................................................................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................TGAACTTGAAA---------------------------------CGT-TGTCAT---GAAA......................................................................................................................................................................................................................................................................................2411.00100000000100000000
.................................................................................................................................................................................................................................................................................................................GTTGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-...................................................................................................................................................................................................................................................................................................2611.00100000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................GTCAT---GAAATACAATACAATACC-----GA.................................................................................................................................................................................................................................................................2511.00100000000100000000
..............................................................................................................................................................................................................................................................................................................AGCGTTGATG---------AAA-ACT..................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................TGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAA.................................................................................................................................................................................................................................................................................2911.00100000000100000000
..............................................................................................................................................................................................................................................................................................................AGCGTTGATG---------AAA-ACTGAACTTGA..........................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................AA-ACTGAACTTGAAA---------------------------------CGT-TGT................................................................................................................................................................................................................................................................................................2111.00101000000000000000
........................................................................................................................................................................................................................................................................................................GAATTAAGCGTTGATG---------AAA-ACTGAAC..............................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.......................................................................................................................................TCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGT........................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
....................................................................................................................................................................................................................................................................................AACTCCAAGTATCGATTATCGAATTA............................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
..................................................................................................................................................................................................................................................................................................................TTGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-T..................................................................................................................................................................................................................................................................................................2611.00100000000000010000
............................................................A------------GGCGGAAGTTGGTAATGGACATTGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
..........................................................................................................................................TG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-......................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
....................................................................................................................................................................................................................................................................................................................GATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGT................................................................................................................................................................................................................................................................................................2611.00100000000001000000
...........................................................................................................................................................................................................................................................................................................TTAAGCGTTGATG---------AAA-ACTGAACTT............................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
.................................................................................................................................................................................................................................................................................................................GTTGATG---------AAA-ACTGAA...............................................................................................................................................................................................................................................................................................................................................1611.00100000010000000000
.....................................TGGCAACAACGACA---AGGAGCA------------GGCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
............................................................................................................................................................................................................................................................................................................TAAGCGTTGATG---------AAA-ACT..................................................................................................................................................................................................................................................................................................................................................1811.00100000010000000000
..................................................................................TGGTAATGGACATTGAAC------------------AT----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000000000
.................ACAA------CC---AGCAATGGCAACAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.00200002000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------------------------------------------------------------------------------------------------------TTAGTCATTTCCGTAGA.......................................................................................................................1911.00100000100000000000
.........................................AACAACGACA---AGGAGCA------------GGCGGAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
........................................................................................TGGACATTGAAC------------------AT----TATTAAGACTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
......................................................................................................................................................................................................................................................................................................TCGAATTAAGCGTTGATG---------AAA-ACTGAAC..............................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.................................................................................................................................................................................................................................................................................................................GTTGATG---------AAA-ACTGAACTTGAAA---------------------------------.......................................................................................................................................................................................................................................................................................................2311.00100000000100000000
...............................................................................................................................TAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
............................................................................................................................................................................................................................................................................................................TAAGCGTTGATG---------AAA-ACTGAACTTGAA.........................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
................................................................................................................................................................................................................................................................GCCCCCTAAGT-CTAGGT........................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.........................................................AGCA------------GGCGGAAGTTGGTAATGGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.............................................................................................................................ATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCC....................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
..............................................................................................................................................................................................................................................................................................................................................GAAA---------------------------------CGT-TGTCAT---GAA.......................................................................................................................................................................................................................................................................................1611.00100000010000000000
....................................................................................................................................................................................................................................................................................................................GATG---------AAA-ACTGAACTTG...........................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
..............................................................................................TTGAAC------------------AT----TATTAAGACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
...........................................................................................................................................................................................................................................................................................................TTAAGCGTTGATG---------AAA-ACTGAACT.............................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
.........................................................................................................................................................................................................................................................................................................AATTAAGCGTTGATG---------AAA-ACT..................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
..........................................................................................................................................................................................................................................................................................................ATTAAGCGTTGATG---------A........................................................................................................................................................................................................................................................................................................................................................1511.00100000010000000000
...................................................................................GGTAATGGACATTGAAC------------------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.............................................................................................................................................................................................................................................................................................................AAGCGTTGATG---------AAA-ACTGAACTTGA..........................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
......................................................................................AATGGACATTGAAC------------------AT----T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000100000000
......................................................................................................................................................................................................................................................................................................................TG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCA..............................................................................................................................................................................................................................................................................................2611.00100000010000000000
..................................................................................TGGTAATGGACATTGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000001000000000
......................................................................................................................................................................................................................................................................................................................TG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---G.........................................................................................................................................................................................................................................................................................2811.00100000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................T---GAAATACAATACAATACC-----GA.................................................................................................................................................................................................................................................................2111.00100000000010000000
...............................................................................................................................TAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGC........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000000000
............................................................A------------GGCGGAAGTTGGTAATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................ATG---------AAA-ACTGAACTTGAAA---------------------------------CG.....................................................................................................................................................................................................................................................................................................2111.00100000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................T---GAAATACAATACAATACC-----GAT................................................................................................................................................................................................................................................................2211.00100000000010000000
...................................................................................................C------------------AT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCAT---GAAATACAATACAATACC-----GAT................................................................................................................................................................................................................................................................2511.00110000000000000000
............................................AACGACA---AGGAGCA------------GGCGGAAGTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
......................................................................................................................................CTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGT........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.................................................................................................................................................................................................................................................................................................GATTATCGAATTAAGCGTTGAT...................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................A-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---G.........................................................................................................................................................................................................................................................................................2411.00100000010000000000
......................................................................................AATGGACATTGAAC------------------AT----TATTAAGACTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................AA-ACTGAACTTGAAA---------------------------------C......................................................................................................................................................................................................................................................................................................1611.00100000010000000000
...................................AATGGCAACAACGACA---AGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100001000000000000
...................................AATGGCAACAACGACA---AGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100001000000000000
................................................................................................................................AAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------C...........................................................................................................................................................................................................................................................................................................................................................................................................................1530.33100000010000000000
........................................................GAGCA------------GGCGGAAGTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1630.33100000000001000000
...................................................................................................................................................................................................................................................................................................................................A-ACTGAACTTGAAA---------------------------------CC.....................................................................................................................................................................................................................................................................................................16130.08100000000100000000
droSec2
CG-------TAA---CGACAA------CC---AGCATTGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------------AT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGAATTAAGCGTTGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACAACTATACAC------------------------------------------------------------------------------------------------------------TTAGTCATTTCCGTAGATCA-------------------------------TCCAT--CCA--------------------------TTTGCAG-GCCC-----------GAA-AAA--------------GAAAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................TTATCGAATTAAGCGTTGA....................................................................................................................................................................................................................................................................................................................................................................1911.0011000
................................................................................................................................................................................................................................................................................................CGATTATCGAATTAAGCGTTGAT...................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...............................................................................AGTTGGTAATGGACATTGAAC------------------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------TTTGCAG-GCCC-----------GAA-AAA--------------GA...2011.0011000
dm3
CA-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGATGTTGGTAATGGACATTGAAC------------------AT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGAATTAAGCGTTGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACAACAATACAC------------------------------------------------------------------------------------------------------------TTAGTCATTTCCGTAGATCA-------------------------------TCCAT--TCA--------------------------TTTGCAG-GCCC-----------GAA-AAC-------------GAAAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
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Embryo		V083
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CME-W2		V086
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Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
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fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
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Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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....................................................................................................................................................................................................................................................................................................................................................................................................TACAATACAATACC-----GATACAACA..........................................................................................................................................................................................................................................................2312.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................................................................................................................................................................................................................TATCGATTATCGAATTAAGCGTTGATG---------.........................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................T-TGTCAT---GAAATACAATACAATACC-----GAT................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AAGCGTTGATG---------AAA-ACTGAACTTGAA.........................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................CGATTATCGAATTAAGCGTTGAA...................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CA---AGGAGCA------------GGCGGATGTTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................AATGGCAACAACGACA---AG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CTTGAAA---------------------------------CGT-TGTCAT---GAAATACAAA................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CA------------GGCGGATGTTGGTAATGGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................ACTTGAAA---------------------------------CGT-TGTCAT---GAAAT.....................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCC......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GAAC------------------AT----TATTAAGACTCTCGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................................................................GAATTAAGCGTTGATG---------AG.......................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TCGAATTAAGCGTTGATG---------AAA-ACTGAA...............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CCAAGTATCGATTATCGAATTAAGCGT.......................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AAGTATCGATTATCGAATTAA...........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AGCCCCCTAAGT-CTAGGTT-......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AATGGACATTGAAC------------------AT----TATTAAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TGGTAATGGACATTGAAC------------------AT----T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TATCGAATTAAGCGTTGATG---------AAA-ACTGA................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AAATACAATACAATACC-----GA.................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AATACC-----GATACAACAATA.......................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GAGCA------------GGCGGATGTTGGTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GTTGATG---------AAA-ACTGAACTTGA..........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TAAGCGTTGATG---------AAA-ACTGAA...............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CAACGACA---AGGAGCA------------GGCGGATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................GGCAACAACGACA---AGGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................ATGGCAACAACGACA---AGGAGCA------------GGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TCGAATTAAGCGTTGATG---------AAA-ACTG.................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................AT---GAAATACAATACAATACC-----GATA...............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GATTATCGAATTAAGCGTTGAT...................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CAACGACA---AGGAGCA------------GGCGGATGTTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AGCCCCCTAAGT-CTAGGTT-AACTCC................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AGCGTTGATG---------AAA-ACTGAACTTGAA.........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................A-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAAT.....................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TTGATG---------AAA-ACTGAACTT............................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.A-------TAA---CGACAA------CC---AGCAATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CA---AGGAGCA------------GGCGGATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
....................................................................................................................................................................................................................................................................................................................GATG---------AAA-ACTGAACTTGAAA---------------------------------.......................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CAT---GAAATACAATACAATACC-----GAT................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................CTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCT...................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CTTGAAA---------------------------------CGT-TGTCAT---GAAATAC...................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TTGATG---------AAA-ACTGAACTTGAAA---------------------------------.......................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAG..........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GCA------------GGCGGATGTTGGTAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------------------------------------------------------------------------------------------------------TTAGTCATTTCCGTAGATCA-------------------------------TC...................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CC---AGCAATGGCAACAACGACA---AGGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCA..............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................AGGAGCA------------GGCGGATGTTGGTAATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................T-AACTCCAAGTATCGATTATCGAATTA............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GAACTTGAAA---------------------------------CGT-TGTCAT---GA........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GGCAACAACGACA---AGGAGCA------------GGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GAACTTGAAA---------------------------------CGT-TGTCA..............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GGCGGATGTTGGTAATGGACATTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGT........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GAATTAAGCGTTGATG---------AAA-ACTG.................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AATACAATACC-----GATACAAA...........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................C---AGCAATGGCAACAACGACA---AG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAC------------------------------------------------------------------------------------------------------------TTAGTCATTTCCGTAGATCA-------------------------------TC...................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GACA---AGGAGCA------------GGCGGATGTTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AGCGTTGATG---------AAA-ACTGAA...............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AACTTGAAA---------------------------------CGT-TGTCAT---GAA.......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CGTTGATG---------AAA-ACTGAACTT............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TGGACATTGAAC------------------AT----TATTAAGACTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CAACAACGACA---AGGAGCA------------GGCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................A-ACTGAACTTGAAA---------------------------------CGT-TGTA...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AATGGCAACAACGACA---AGGAGCA------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................AGCA------------GGCGGATGTTGGTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................ATGGCAACAACGACA---AGGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................AATACAATACAATACC-----GA.................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CGGATGTTGGTAATGGACAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CT............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TAA---CGACAA------CC---AGCAATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TGGACATTGAAC------------------AT----TATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................ACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAA.................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTC...............................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GAGCA------------GGCGGATGTTGGTAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GGCGGATGTTGGTAATGGACATTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AACAACGACA---AGGAGCA------------GGCGGATGTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AATGGCAACAACGACA---AGGAGCA------------GGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGC........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACA.............................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................T---GAAATACAATACAATACC-----GATACAACA..........................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGAACTTGAAA---------------------------------CGT-TGTCAT---G.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................AAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCC......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GAGCA------------GGCGGATGTTGGTAATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................ATGGACATTGAAC------------------AT----TATTAAGACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CA---AGGAGCA------------GGCGGATGTTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GAAA---------------------------------CGT-TGTCAT---GAAAT.....................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................AGCA------------GGCGGATGTTGGTAATGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................AAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................................TCGAATTAAGCGTTGATG---------AAA-.....................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GATGTTGGTAATGGACATTGAAC------------------AT----T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................ACTGAACTTGAAA---------------------------------CGT-TG.................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TTAAGCGTTGATG---------AAA-ACTGAAC..............................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCC....................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................A------------GGCGGATGTTGGTAATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................T---GAAATACAATACAATACC-----G..................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CG-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------------AT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGAATTAAGCGTTGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACAACAATACACCAA-A-ACTCG-----------------T--GCTCGAGAACTCGAC---------TCAGT-----------------------------------------------------CATTTCCATAGATCA-------------------------------TCCAT--TCA--------------------------TTTGCAG-GCCA-----------GAT-AAAGAAATTCAAAATGCG-AAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................CTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGT........................................................................................................................................................................................................................................................................................................................................................................................................2915.0050000005
.................................................CA---AGGAGCA------------GGCGGAAGTTGGTAATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000
......................................GGCAACAACGACA---AGGAGCA------------GGCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001
droYak3
CG-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------------AT----TATTAAGACTCTTGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGAATTAAGCGTTGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GTTGCAACAATACACCAA-A-ACTCG-----------------TCTCCTCGAGAACTCGAC---------TCAGT-----------------------------------------------------CATTTCCGTAGATCA-------------------------------TCCAT--TCA--------------------------TTTGCAG-GCCC-----------CAA-AACG------------AACAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................ACAACGACA---AGGAGCA------------GGCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22118.0018000000000018
.......................................................................................................................................TTGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGT........................................................................................................................................................................................................................................................................................................................................................................................................2618.00800000000008
..............................................................................................................................................................................................................................................................................................................AGCGTTGATG---------AAA-ACTGAAC..............................................................................................................................................................................................................................................................................................................................................2012.00211000000000
...........................CC---AGCAATGGCAACAACGACA---AGGAGCA------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TACC-----GTTGCAACAATACACCAA-A-AAAA..........................................................................................................................................................................................................................................2711.00101000000000
..................................................................................................................................................................................................................................................................................................................................AA-ACTGAACTTGAAA---------------------------------CGT-TGTC...............................................................................................................................................................................................................................................................................................2211.00100100000000
........................................................GAGCA------------GGCGGAAGTTGGTAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...............................................................................................................................................................................................................................................................................................TCGATTATCGAATTAAGCGTTGATG---------AA.......................................................................................................................................................................................................................................................................................................................................................2711.00100000000001
.......................................GCAACAACGACA---AGGAGCA------------GGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
CA-------TAA---AGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTTTAACTCCAAGTATCGATTATCGATTTAAGCGTAGATG---------AAAAACTGAACTTAAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACACCAATATAT-A---------------------------------GAGA----GA--------ATTCAGT-----------------------------------------------------CATTTCCGTAGATC--------------------------CATCCATCCAT--CCA--------------------------TTTGCAG-GCCC-------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TG-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGATTTAAGCGTAGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACAA----ACAC-C------CCG--------------------CCTCGAGAACTCGAT---------TCAGT-----------------------------------------------------CATTTCCGTAGATCA-------------------------------TCCACCATCA--------------------------TTTGCGG-GC------------------------------------AGASizeHit CountTotal NormTotal
No Reads
droTak1
CG-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGAATATCGATTTAAGCGTAGATG---------AAA-ACTGAACTTAAAA---------------------------------CGT-TGTCATGATGAAATACAATACAATACC-----GATACAA---T-----------------------------------CCTCGAGAACTCGAT---------TCAGT-----------------------------------------------------CATTTCCGTAGATCA-------------------------------TCCAT--CCA--------------------------TTTGCGG-GCCC-----------GAA-AC--------------AAAAAASizeHit CountTotal NormTotal
No Reads
droEle1
CG-------TAA---AGACAA------CC---AGCAATGGAAACAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGATTTAAGCGTAGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACTGCAACACAC-AA-A-GCTCG-----------------T--GC--------TCGAT--------CTCAGTCATT-----------------------------------------------GTCATTTCCGTAGCTCA-------------------------------TCCAT--CCA--------------------------T-TGCAG-GTCC-----------GAA--------------------AAASizeHit CountTotal NormTotal
No Reads
droRho1
CA-------TAA---CGACAA------CC---AGCAATGGCAACAACGACA---AGGAGAA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATTAAGACTCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGTCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGATTATCGAATTAAGCGTAGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATACC-----GATACTACAATACAC-AA-A-GCTCG-----------------T--GGTTGCGAACTCCAT---------TCAGTCATT-----------------------------------------------ATCATTTCCGTAGATCA-------------------------------TCTAT--CCA--------------------------T-TGCAG-GATC-----------GA--------------------AAAASizeHit CountTotal NormTotal
No Reads
droFic1
CG-------TAA---CGACAA------CC---AGCAACGGCAACAAAGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGATATTGAAC------------TTGAACCT----TATTAAGACTCGCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGT-CTAGGTT-AACTGCAAGTATCGCATATCGAATTAAGCGTAGATG---------AAA-ACTGAACTTAAAA---------------------------------CGT-TGTCATGATGAAATACAATACAATACC-----GATACAACAATACAA-AA-A--C------GAAACACAGGTTCTT--GC-------------------------------------------------------------------------------------TCGTAGATCA----------------------------------AT--CCA--------------------------TTTGCAG-GACT--CCCCCCC--AAAAAC--------------ATAAAASizeHit CountTotal NormTotal
No Reads
droKik1
AGGCTCATCTAA---CGACAT------CCTCGAGCAATGGGGACAAGGACG---CGGTGCA---GGAGCCGGCGGCAGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATTAAGACTCTCGTGCA----------------------------------------------------------------------------------------------------CA----------TAGCCCCCTAAGT-CTAGGTT-AACTCCAAGTATCGAATATCGATTTAAGCGTAGATG---------AAA-ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAAAACC-----AACAT--------AA-AACA-------------------------------------------------------------------------------AGC-----------------------------TATCGTAGATCA-------------------------------TTCAT--T-----------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CA-------CCA---TCCCAGCACCAAAT---ACCAATGGCAGCAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATT-AGACTCTCGTG------------------------------------------------------------------------------------------------------CA----------TAGCCCCCTAAGA-TTAGGTT-AATCCCAAGTATCGATTACCGATTTAAGCGTAGATG---------AAAAACTGAACTTGAAA---------------------------------CCC-TGTCAT---GAAATACAATACAATACACTATGGTTACCACAAAACTCAAA-A-GTTCG-----------------T--ACTCGTTACCTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA-TG--------------GGTATASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................AAAT---ACCAATGGCAGCAACGACA---AGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
........................................................GAGCA------------GGCGGAAGTTGGTAATGGACATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................AATACACTATGGTTACCACA..........................................................................................................................................................................................................................................................2011.001010000
droBip1
CA-------CCA---TCACAGCACCCAAT---ACCAATGGCAGCAACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTGAAC------------TTGAACAT----TATT-AGACTCTCGTG------------------------------------------------------------------------------------------------------CA----------TAGCCCCCTAAGA-TTAGGTT-AATCCCAAGTATCGATTACCGATTTAAGCGTAGATG---------AAACACTGAACTTGAAA---------------------------------CCT-TGTCAT---GAAATACAATACAATACACTATGGTTACCACAAAA----------CTCGAATGTA-----------T--GCT--------CAGTAGTAGGAATTCA-------------------------------GATACTCTTCTTGTGT--------CTTTT-----------------------------------------------------------------------------------G-GCCC-----------CTG-AC--------------CTCGAASizeHit CountTotal NormTotal
No Reads
dp5
CG-------CCA---CGACAA------CC---AGCAATGGCGGCCACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTAAAC------------T-----GT----TATTAAGACGCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGC-CTAGGTT-AACACC-AGTATCGAATATCGA-TTAAGCGTAGATG---------AA--ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATAAC-----GATAC--CAATACAC-AATATACTC-----------------------CCGAGA--TCGAT---------TCAGTCATTGCTAGTGCCAGATCTAA--------GGGGATCTCCCAGTGGATCTTGGCCATATCCATCGTCCA-------------------TCAA--------TCCAT--CCATCCAGCCATCTGTCATTCCGTCCAGTTTTGCAG-----------------TA-TAC--------------GAAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAGATCTAA--------GGGGATCTCCCAG..............................................................................................................................................2513.0030200100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTAGTGCCAGATCTAA--------GG.........................................................................................................................................................2112.0020200000000
.........................................................................................................................................................................................................................................................................................................................................AACTTGAAA---------------------------------CGT-TGTCAT---G.........................................................................................................................................................................................................................................................................................1911.0010000010000
............................................CACGACA---AGGAGCA------------GGCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................ATGGCGGCCACGACA---AGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
..................................................A---AGGAGCA------------GGCGGAAGTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCATTGCTAGTGCCAGAT.......................................................................................................................................................................2011.0010100000000
....................A------CC---AGCAATGGCGGCCACGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
..............................................CGACA---AGGAGCA------------GGCGGAAGTTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000001
..............................................................................................................................................................................................................................................................................................................AGCGTAGATG---------AA--ACTGAACTT............................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................AATGGCGGCCACGACA---AGGAGCA------------G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGTGCCAGATCTAA--------GGGGATCTC..................................................................................................................................................2611.0010010000000
................................AGCAATGGCGGCCACGACA---AGGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................CAATACAATAAC-----GATAC--CAAT........................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGTGGATCTTGGCCATATCCATCGA.......................................................................................................................2811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAGATCTAA--------GGGGATCTC..................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTCCA-------------------TCAA--------TCCAT--CCAT..........................................................................2111.0010000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATATCCATCGTCCA-------------------TC...............................................................................................1911.0010010000000
................................................................................................................................AAGACGCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCT...................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCCATCTGTCATTCCGTCCAG..................................................2511.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAGATCTAA--------GGGGATCTCCCAGT.............................................................................................................................................2611.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................GAAATACAATACAATAAC-----GAT................................................................................................................................................................................................................................................................2111.0010010000000
..................CAA------CC---AGCAATGGCGGCCACGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.......................................GCGGCCACGACA---AGGAGCA------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
CG-------CCA---CGACAA------CC---AGCAATGGCGGCCACGACA---AGGAGCA------------GGCGGAAGTTGGTAATGGACATTAAAC------------T-----GT----TATTAAGACGCTCGTG------------------------------------------------------------------------------------------------------CG----------TAGCCCCCTAAGC-CTAGGTT-AACACC-AGTATCGAATATCGA-TTAAGCGTAGATG---------AA--ACTGAACTTGAAA---------------------------------CGT-TGTCAT---GAAATACAATACAATAAC-----GATAC--CAATACAC-AATATACTC-----------------------CCGAGA--TCGAT---------TCAGTCATTGCTAGTGCCAGATCTAA--------GGGGATCTCCCAGTGGATCTTGGCCATATCCATCGTCCA-------------------TCAATCCATCCATCCAT--CCATCCAGCCATCTGTCATTCCGTCCAGTTTTGCAG-----------------TA-TAC--------------GAAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGCCAGATCTAA--------GGGGATCT...................................................................................................................................................2311.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA--------GGGGATCTCCCAGTGGATCTT......................................................................................................................................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................TGAACTTGAAA---------------------------------CGT-TGTCAT---G.........................................................................................................................................................................................................................................................................................2111.001010000
droWil2
CA-------CGA---CCACAATTATCACC---AGCAATGG------CGACA---AGGAGCATCAGCAGACGACGACGGAAGTTGGTAATGGACATTGAAC------------T-----GTTGT-TATT-AGACTCTCTTGTT----------------------------------------------------------------------------------------------------CG----------TAGCCTCCTAAGT-CTAGATTTTACACCAAGTATCGAATATCGATTTAAGCGTAGATGGAATGAAAGAAA-ACTGAACTTGAAA---------------------------------CATTTGTCAT---GAAATACAATACAAAAAC-----AA-ACTATAAAA----------------------------------------GAAATC-------------C--------------------AAAAAGAATTGAT------------------TTATATACATTTG---ATCGACTGAGAACATCCTTACCATGCACCCATATATCCAT--TCA--------------------------T----------C-----------G----------------------AACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................ACA---AGGAGCATCAGCAGACGACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.....................................................................................................................................................................................................................................................................................ACACCAAGTATCGAATATCG.................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
droVir3
GG-------CAAAGCCGGCCA------CA---ATCAATGGCACCACCGAAA---AGGAGCA------------GACGGAAGTTGGTAATGGACATTGAATCCTCTATCTAACT-----GTTGTTTATT-AGACACACAA----------ATACACACACAAACACACGCACACACACAAACACACACAGATCCCCTCT-----GCA----------------------------------TATATAGACACACCTAAG-T-CTAAGCCCTAGTTT-AATGGAAAGTATCGATTAACGATTTAAGCGAT---A---------AGA------TTTTGAAG-----T-----TTTTGGTGGATGAAACGATAAACGA-TAAACT---GAAATACAGAATAATAAT-----TGTG--------------------------------------------------------------------------------------------------------------------------------CCCAGAAACCA-------------------------------GTCCT--TTA--------------------------TTTGCTTTGTCC---AA-CC---G-------------------AAAGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................CGAAA---AGGAGCA------------GACGGAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000001010000000000000000000000000000000000000000000000000
..................................................A---AGGAGCA------------GACGGAAGTTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000010000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................A------TTTTGAAG-----T-----TTTTGGT......................................................................................................................................................................................................................................................................................................................1712.002000000000000000000000000000000000000000000000000000000000000002
.....................................................................................................................................................................................................................................................................................ATGGAAAGTATCGATTAACGATT..............................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000000000000000000000000000020000000000000000000000000
..........................................................................................GACATTGAATCCTCTATCTAACT-----GTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002000000000001000000000000000000000010000000000000000000000000000
...............................................GAAA---AGGAGCA------------GACGGAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000020000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTTGGTGGATGAAACGAT..........................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................CTCTATCTAACT-----GTTGTTTATT-AG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AAACGA-TAAACT---GAAATACAGAAT..............................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................CCCCTCT-----GCA----------------------------------TATATAGACACAC.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
......................................................AGGAGCA------------GACGGAAGTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000001000000000000000000000000000000000000000000000000000000
....................................................................................................CCTCTATCTAACT-----GTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AACGATTTAAGCGAT---A---------AGA------TTTT............................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GAAAGTATCGATTAACGAT...............................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
...................................................................................GGTAATGGACATTGAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTTGAAG-----T-----TTTTGGTGGAT..................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TTTTGGTGGATGAAACGATAAA.......................................................................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TTGAAG-----T-----TTTTGGTGGAT..................................................................................................................................................................................................................................................................................................................1811.001000000001000000000000000000000000000000000000000000000000000000
.................................................AA---AGGAGCA------------GACGGAAGTTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
.....................................TGGCACCACCGAAA---AGGAGCA------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
.......................................................GGAGCA------------GACGGAAGTTGGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................AAGCCCTAGTTT-AATGGAAAGTAT..........................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AACGATTTAAGCGAT---A---------AGA------T...............................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................CAAACACACGCACACACACAAACACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
.......................................................GGAGCA------------GACGGAAGTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................T-AATGGAAAGTATCGATTAACGAT...............................................................................................................................................................................................................................................................................................................................................................................2411.001000000000001000000000000000000000000000000000000000000000000000
..........................................................GCA------------GACGGAAGTTGGTAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000001000000000000000000000000000000000000000000000000000
..................................CAATGGCACCACCGAAA---AGGAGCA------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GA------TTTTGAAG-----T-----TTTTGGTGGAT..................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................CTAACT-----GTTGTTTATT-AGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................A---------AGA------TTTTGAAG-----T-----TTTTGGTGGATGA................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
...............................................GAAA---AGGAGCA------------GACGGAAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
..................................................................................................ATCCTCTATCTAACT-----GTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................AG-T-CTAAGCCCTAGTTT-AATGGAA...............................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................TGGTAATGGACATTGAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATAATAAT-----TGTG--------------------------------------------------------------------------------------------------------------------------------CCCAGAA........................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................A------TTTTGAAG-----T-----TTTTGGTGGAT..................................................................................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................AGTTT-AATGGAAAGTATCG........................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AGCCCTAGTTT-AATGGAAAG.............................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................CAGATCCCCTCT-----GCA----------------------------------TATATA....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000001000000000000000000000000000000
..........................................CCACCGAAA---AGGAGCA------------GAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CCCTCT-----GCA----------------------------------TATATAGACACACCTAAG-T-CTAAGCCCTAGTTT-AA....................................................................................................................................................................................................................................................................................................................................................................................................4411.001000000000000000000000000000000000000000001000000000000000000000
.................................................................................................................................................................................................................................................................G-T-CTAAGCCCTAGTTT-AATGGAA...............................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000001000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................GGTGGATGAAACGATAAACGA-T..................................................................................................................................................................................................................................................................................................2211.001000000001000000000000000000000000000000000000000000000000000000
................................ATCAATGGCACCACCGAAA---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TAGTTT-AATGGAAAGTATCGAT......................................................................................................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
........................................CACCACCGAAA---AGGAGCA------------GAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ATTAACGATTTAAGCGAT---A---------A........................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
.......................................................GGAGCA------------GACGGAAGTTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
.................................................AA---AGGAGCA------------GACGGAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................ACACACAGATCCCCTCT-----GCA----------------------------------T.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
.......................................................GGAGCA------------GACGGAAGTTGGTAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................GAAAGTATCGATTAACGATTTAAGC.........................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................AT---A---------AGA------TTTTGAAG-----T-----TTTTGGTGGAT..................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................AAGCCCTAGTTT-AATGGAAA..............................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000
........................................................................................................TATCTAACT-----GTTGTTTATT-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................................................ACAA----------ATACACACACAAACACACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................CACAAACACACGCACACAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................CACACAAACACACGCACACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000010
droMoj3
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTCCTAGTTT-AATAGCAAGTATCGATTAACGATTTAAGTCTA--AG---------AAT-TT---TTTTGAAG-----TTTTCTTTTTGATAGTTGAAA-------CGA-TAAACT---GAAATACATAATAATAAT-----AATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AA-------AGC---CGATTA------CT---GTCAATGGCAGCAATGGCAGCAGCGAGCA------------GGCGGAACTTGGTAATGGACACTGAAA------------T-----GT----TCTTAATATTTAGATACACATACACAAGCACACACAAACACA--CACACACACAAACACATACACGTCCCCTTTCCCTTGCACACTCTATTCCGCTCTCTTCTCACTCCCTGTCTCTGTATGCACACACCTAGG-TGCTAAGT-CTAGTTTAAATTGAAAGTATCGATTAACGATTTAAGCG---ATA---------ACA-ATTTAAGTCTAAACGTTTTTTTTTTTTTGGAAGCTGAAACGA-----------AAT---GCGATAAACTGAAATACA-----GAAATAATTGTG--------------------------------------------------------------------------CCAAAAAAAAAGAAGCTAG------------------TTATTCATTTTTG-----------------------------------------------A--------------------------TTTTTGT-GCCCCCCCCCCCCACAAA-AA--------------AAAAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................AACACATACACGTCCCCTTTCCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
...................................................GCAGCGAGCA------------GGCGGAACTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
....................................................................................................................................................................................................................................ACTCCCTGTCTCTGTATGCAC.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
.....................................................................................................................................................................................................................................................................................ATTGAAAGTATCGATTAACG.................................................................................................................................................................................................................................................................................................................................................................................2011.00110
.....................................................................................TAATGGACACTGAAA------------T-----GT----TC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
..................................................................................................................................................................................................................................................................................TAAATTGAAAGTATCGATTAACGATT..............................................................................................................................................................................................................................................................................................................................................................................2611.00110

Generated: 05/19/2015 at 05:40 AM