ID:

dsi_16579

 Coordinate:

3r:20370784-20370933 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.2 -5.1 -4.9

Flybase annnotation

three_prime_UTR [3r_20370685_20371121_-]; exon [3r_20370685_20371163_-]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

##########################################################################################################################################################################################################################################################
CATGGCGAGCATATAAAACGAACATGTGGGATCTAGGATTAACGATTAAAGTATGATAACATTTTTACGTAATTATTTATTACAATATTTATATAAATCTATTGACGCTCACATTGAACAGTTCATAAAAAATTAATGATCGATTTTGCCGATATATATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATCTAAAGTGTA
************************************************************************************************..........((((...(((....(((.(((((.........((((.......))))............))))).)))..))).))))....************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR553488
RT_0-2 hours eggs
 M053
female body
 M023
head
 O001
Testis
....................................................................................................................................................................................................TTCCTTGTAGTTGCACTGTAACAATT............................ 26 0 1 22.00 22 9 9 0 0 0 4 0 0 0 0 0 0
.....................................................................................................................................................................................................TCCTTGTAGTTGCACTGTAACAATTTA.......................... 27 0 1 9.00 9 3 5 0 0 0 0 1 0 0 0 0 0
.............TAAAACGAACATGTGGGATCTAGGA.................................................................................................................................................................................................................... 25 0 1 8.00 8 1 4 2 1 0 0 0 0 0 0 0 0
.............TAAAACGAACATGTGGGATCTAGGAT................................................................................................................................................................................................................... 26 0 1 8.00 8 2 2 3 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TCCTTGTAGTTGCACTGTAACAATT............................ 25 0 1 8.00 8 2 5 0 0 0 0 1 0 0 0 0 0
...........TATAAAACGAACATGTGGGATCTAGGA.................................................................................................................................................................................................................... 27 0 1 5.00 5 2 1 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TTCCTTGTAGTTGCACTGTAACAATTTA.......................... 28 0 1 5.00 5 2 3 0 0 0 0 0 0 0 0 0 0
...........TATAAAACGAACATGTGGGATCTAGGAT................................................................................................................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
..TGGCGAGCATATAAAACGAACATGTG.............................................................................................................................................................................................................................. 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................CATTTATAAACACCAAGGAGTCTGC.............................................................. 25 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TATAAACACCAAGGAGTCTGCTTCAG......................................................... 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TGTAACAATTTATACAACTTATTTGAA........... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CCTTGTAGTTGCACTGTAACAATT............................ 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
................................................................................................ATCTATTGACGCTCACATTGAACAGT................................................................................................................................ 26 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0
........GCATATAAAACGAACATGTGGGAT.......................................................................................................................................................................................................................... 24 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CCATTCCTTGTAGTTGCACTG.................................... 21 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0 0
........................TGTGGGATCTAGGATTAACGATTAAAG....................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TCTATTGACGCTCACATTGAACAGT................................................................................................................................ 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
........GCATATAAAACGAACATGTGGGATCTAGG..................................................................................................................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.............TAAAACGAACATGTGGGATCTAGGATT.................................................................................................................................................................................................................. 27 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0 0
..................................................................................................................TGAACAGTTCATAAAAAATTAATGATCGA........................................................................................................... 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..TGGCGAGCATATAAAACGAACATGTGGGA........................................................................................................................................................................................................................... 29 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TTGAACAGTTCATAAAAAATTAATGATCGA........................................................................................................... 30 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGCACTGTAACAATTTATACAACTTAA................ 27 1 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
........................TGTGGGATCTAGGATTAACGATTA.......................................................................................................................................................................................................... 24 0 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................TTCCTTGTAGTTGCACTGTAACAAT............................. 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................ATTCCTTGTAGTTGCACTGTAAC................................ 23 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0
.....................................................................................................................................................................................................TCCTTGTAGTTGCACTGTAACAA.............................. 23 0 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................ATAAACACCAAGGAGTCTGCTTCAGCCA...................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTAATGATCGATTTTGCCGAT................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
..................CGAACATGTGGGATCTAGGATTAACGAT............................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TTCAGCCATTCCTTGTAGTTGCA....................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................CCATTCCTTGTAGTTGCACTGTAACAA.............................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................ATTCCTTGTAGTTGCACTGTAACAATTT........................... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................TTATAAACACCAAGGAGTCTGTAT............................................................ 24 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................TATAAATCTATTGACGCTCACATTGAACAG................................................................................................................................. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GTAGTTGCACTGTAACAATTTATACAAC.................... 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................TCAGCCATTCCTTGTAGTT.......................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................................................................CTTGTAGTTGCACTGTAACAATTTA.......................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TCCTTGTAGTTGCACTGTAA................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................ATTTATACAACTTATTTGAATCTAA...... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................TAAACACCAAGGAGTCTGCTTCAGCCAT..................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................CATTCCTTGTAGTTGCACTGTAACAA.............................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................................................CATTCCTTGTAGTTGCACTGTAACAAT............................. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................TGCACTGTAACAATTTATACAACTTATT............... 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................ACACCAAGGAGTCTGCTTC........................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................TATAAACACCAAGGAGTCTGCTT............................................................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TAAACACCAAGGAGTCTGCTTCAGC........................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................TTCGTTGTAGTTGCACTGTAACAAT............................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TTCAGCCATTCCTTGTAGTTGCACTGTA.................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TATAAACACCAAGGAGTCTGCTTC........................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................ACATGTGGGATCTAGGATTAA................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATACAACTTATTTGAATCTAAAGTGC. 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGCACTGTAACAATTTATACAACTT.................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TAAACACCAAGGAGTCTGCTTCAGCCA...................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................TGATAACATTTTTACGTAATTAT.............................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............TAAAACGAACATGTGGGATCTAGG..................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................ACATGTGGGATCTAGGATTAACGA............................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................TCTATTGACGCTCACATTGAACAGTTCA............................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................ATTCCTTGTAGTTGCACTGTAACAATTTA.......................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTAATGATCGATTTTGCCG................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
...........TATAAAACGAACATGTGGGATCTAGG..................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CCATTCCTTGTAGTTGCACTGTAACAATT............................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................TCTATTGACGCTCACATTGAACAGTT............................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................TAGGATTAACGATTAAAGTATGATAACATT........................................................................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AACACCAAGGAGTCTGCTTCAGCCAT..................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TTTATAAACACCAAGGAGTCTGCTTC........................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................TAAACACCAAGGAGTCTGC.............................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................................................ATCTATTGACGCTCACATTGAACAGTT............................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................AACATGTGGGATCTAGGATTAACGAT............................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................TGTGGGATCTAGGATTAACGATTAAAGTA..................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTATACAACTTATTTGAATCTAAAGT... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TAAACACCAAGGAGTCTGCTTCAG......................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................TATTGACGCTCACATTGAACAGT................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TACAAATCTATTGACGCTCACATTGAA.................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................TCTAGGATTAACGATTAAAGTATGAT................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...........TATAAAACTAACATGTGGGATCTAGGA.................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................ATTTATAAACACCAAGGAGTCTGCT............................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........TATAAAACGAACATGTGGGATCTAGGG.................................................................................................................................................................................................................... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.........................TGTGGATCTAGGATTAACGATTAAAG....................................................................................................................................................................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................GGGATCTAGGATTAACGATTAAAGTATGA.................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATACAACTTATTTGAATCTAAAGTGTA 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................TGTGGGATCTAGGATTAACGATT........................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...............AAACGAACATGTGGGATCTAGGATTAA................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CCTTGTAGTCGCACT..................................... 15 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AACGCCAAGGAGTCTGT.............................................................. 17 2 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................GGACCAAGGAGTCTGCT............................................................. 17 2 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................AACGATCGATTTTCCCG................................................................................................... 17 2 18 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

GTACCGCTCGTATATTTTGCTTGTACACCCTAGATCCTAATTGCTAATTTCATACTATTGTAAAAATGCATTAATAAATAATGTTATAAATATATTTAGATAACTGCGAGTGTAACTTGTCAAGTATTTTTTAATTACTAGCTAAAACGGCTATATATATGTTGTAAATATTTGTGGTTCCTCAGACGAAGTCGGTAAGGAACATCAACGTGACATTGTTAAATATGTTGAATAAACTTAGATTTCACAT
**************************************************************..........((((...(((....(((.(((((.........((((.......))))............))))).)))..))).))))....************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 M024
male body		 SRR553487
NRT_0-2 hours eggs
.............................................................................................................................................................................................AGTCGGTAAGGAACATCA........................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................TGTGGTTCCTCAGACGAAGTC......................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................................................................CTAGATAAAACGGCT.................................................................................................. 15 1 8 0.25 2 0 0 1 0 1 0 0 0
........................ACACCCTAGATCCAA................................................................................................................................................................................................................... 15 1 6 0.17 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................TGGTTCCTCAAACGTAGT.......................................................... 18 2 13 0.08 1 0 0 0 0 0 1 0 0
...............................................................................................................................................................TGTTGTAAAAATTTGTCGTT....................................................................... 20 2 16 0.06 1 0 0 0 0 0 0 1 0
......................................................................................................................................................................AATATTTTTGGCTCCTC................................................................... 17 2 19 0.05 1 0 0 1 0 0 0 0 0
...........................................................................................................................................................................TCCTGGTTCCTCAGACGAT............................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:20370734-20370983 - dsi_16579 CATGGC--GAGCATAT----------A--A-----AA-CGAACATGT--GGGAT-CTAGGATTAACGATTAAAGTATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATATA--TATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
droSec2 scaffold_33:121680-121929 - CATGGC--GAGCATAT----------A--A-----AA-CGAACATGT--GGGAT-CTAGGATTAACGATTAAAGTATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATATA--TATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
dm3 chr3R:20859915-20860165 - CATGGC--GAGCATAT----------A--T-----AA-CGAACATGT--GGGAT-CTAGGATTAACGATTAAAGTATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA----------------------AAAA-TTAATG-ATCGATTTTGCCGATATA--TATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
droEre2 scaffold_4820:7192719-7192967 + CATGGA--GAACATAT----------AA-A-----AA-CCAACATGT--GGGAA-CTAGGATTAACGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
droYak3 3R:25637549-25637796 + CATGGA--GAGCATAT----------A--A-----AA-CCAACATGT--GGGAA-CTAGGATTAACGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
droEug1 scf7180000409692:541004-541253 + CATGAAACAAACATAT----------A--A-----AA-CAAACATTT--GGGAA-CTAGGATTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
droBia1 scf7180000302136:1655377-1655630 - CATGAA--GAACATAT----------A--AAACAATA-CAAACATGT--GGGAA-CTAGGCTTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA----------------------CAAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTGAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
droTak1 scf7180000415658:165627-165880 - CATGAA--GAACATAT----------A--AATCAAAT-CGAGCATGT--GGGAA-CTAGGATTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA----------------------CAAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
droEle1 scf7180000491212:169931-170180 - CATGAA--GAACATAT----------ATAA-----AA-CGAACATGT--GGGA--CTAGGATTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA----------------------CAAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
droRho1 scf7180000778266:24244-24491 + CATGAA--GAACATAT----------A--A-----AA-CGAACATGT--GGGAA-CTAGGATTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
droFic1 scf7180000454055:760484-760731 - CATGAA--GAACATAT----------A--A-----AA-CGAACATGT--GGGAA-ATAGGATTAATGATTAAAGTATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
droKik1 scf7180000302388:1063447-1063705 + CATGAA--GAACATAC----------A--A-ACAAAA-CGAACATGTGTGGGAATTTAGGATTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATATA-----------------------AAG-ATAATG-ATCGATTTTGCCGATATACATATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
droAna3 scaffold_13340:17478281-17478528 + CATGAA--GAACATAT----------A--A-----A--AGAACATGT--GGGAA-ATAGGATTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA----------------------CAAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
droBip1 scf7180000396721:452156-452405 - CATGAA--GAACATAT----------AT-A-----AA-AGAACATGT--GGGAA-ATAGGATTAATGATTAAAATATGATACAATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA----------------------CAAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTA
dp5 2:18214966-18215211 + CATGAT--AAATATAG----------A--AAATAACACCAAACAAGT--GGGAA-TTAGGATAAATGATTAAAATATGAT----TTTTTACGTAATTATTTATTTTAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGGACATACT----------------------AAAA-CTAATG-ACCGATTT-------------GTACAAGATTTCAAAACATCAAGGAACTTTCTTATTTCATTCCTTGTAGTTGCACTGTAACAAATTATAAGAGTTATCTGAATCTAAATAATTTTTA
droPer2 scaffold_3:571096-571341 + CATGAT--AAATATAG----------A--AAATAACACCAAACAAGT--GGGAA-TTAGGATAAATGATTAAAATATGAT----TTTTTACGTAATTATTTATTTTAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGGACATACT----------------------GAAA-CTAATG-ACCGATTT-------------GTACAAGATTTCAAAACATCAAGGAACTTTCTTATTTCATTCCTTGTAGTTGCACTGTAACAAATTATAAGAGTTATCTGAATCTAAATAATTTTCA
droWil2 scf2_1100000004943:13846077-13846361 - AATCCG--AAACATAGAATTAAGCTGA--AAATTAAA-CCAACAAGT--GGTAA-TTAGAATTAAGTATTAAAATACGATAACATTTTTACGTAATTATTTATTACTATATTTATATATATATAAATCGATTGACGCTTTCATTGA-ACAGTTCATAAAACAAAAACAAAAACCACAACACAAAA-TTAATGGATCGATTT-------------ATCCACCATGTATA---ATCAAGGGGTTTGCTTCAGTCATTCCTTGTAGCTGCACTGTAACAATTTATAAAAGTTATTTGAATTCATATAAAGTATA
droVir3 scaffold_12936:501334-501559 - GA---------------------------AAATAAAG-CCAACAACC--GGTAA-TTAGGTATAAATACAATAATATGATAACATTTTTATGTAATTTATTATTA------TTAT------ATAAATCGATCGACGCTTTCATTGA-ACGGTTCATTCG-----------------------AATTTAATTCAA---------TCGATTT----GTACACAATTTAAAGTC---A-AGAGTTTACTTGATTCATTCCTTGTAGCTGCACTGCTAATATTTATTTAACCTATTTCA-TCTATATAAAGTCTA
droMoj3 scaffold_6540:4236483-4236720 - AAAATT--AAGC--TG----------A--AAATAAAG-CCAACAACC--GATAA-TTAGGTTTAACTACAATAATATGATAACATTTTTATGTAATT---TAT---TATATTTAT------ATAAATCGATTGACGCTTTCATTGAAACGGTTCATCAA-----------------------ATT-TTATTGAATCGATT---------T----GTACACAATTTAAA---GTCAAGG-GTTTACTTGATTCATTCCTTGTAGCTGCACTGCTAATATTTATAAAACTAATTTTCATCAATATAAAGTGTA
droGri2 scaffold_15116:483203-483429 + GA---------------------------AAATAAAG-CCAACAACC--GGTAA-TTAGGTTTAACTACAATAATATGATAACATTTTTATGTAATT------TATTATATTTAT------ATAAATCGATTGACTCTTTTTTTGA-ACAGTTCATTCA----------------------AATA-TTATTGAATCGATT---------T----GTACACAATTTAAA---GTCAAGG-GTTTACTTGTTTCATTCCTTGTAGCTGCACTGCTAATATTAATAAAACTTATTTTCATCTATATAAAGTGTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CATGGC--GAGCATAT----------A--A-----AA-CGAACATGT--GGGAT-CTAGGATTAACGATTAAAGTATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATATA--TATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................TTCCTTGTAGTTGCACTGTAACAATT................................26122.002200400099000000000
..............................................................................................................................................................................................................................................................TCCTTGTAGTTGCACTGTAACAATTTA..............................2719.00900000035100000000
...............T----------A--A-----AA-CGAACATGT--GGGAT-CTAGGA..........................................................................................................................................................................................................................................................2518.00800000014000021000
...............T----------A--A-----AA-CGAACATGT--GGGAT-CTAGGAT.........................................................................................................................................................................................................................................................2618.00800000022000031000
..............................................................................................................................................................................................................................................................TCCTTGTAGTTGCACTGTAACAATT................................2518.00800000025100000000
.............TAT----------A--A-----AA-CGAACATGT--GGGAT-CTAGGA..........................................................................................................................................................................................................................................................2715.00500000021000011000
.............................................................................................................................................................................................................................................................TTCCTTGTAGTTGCACTGTAACAATTTA..............................2815.00500000023000000000
.............TAT----------A--A-----AA-CGAACATGT--GGGAT-CTAGGAT.........................................................................................................................................................................................................................................................2813.00300000030000000000
..TGGC--GAGCATAT----------A--A-----AA-CGAACATGT--G.....................................................................................................................................................................................................................................................................2613.00300000030000000000
............................................................................................................................................................................................................................CATTTATAAACACCAAGGAGTCTGC..................................................................2512.00200000001001000000
................................................................................................................................................................................................................................TATAAACACCAAGGAGTCTGCTTCAG.............................................................2612.00200000000000020000
.............................................................................................................................................................................................................................................................................TGTAACAATTTATACAACTTATTTGAA...............2712.00200000020000000000
...............................................................................................................................................................................................................................................................CCTTGTAGTTGCACTGTAACAATT................................2412.00200000020000000000
.............................................................................................................................ATCTATTGACGCTCACATTGA-ACAGT...............................................................................................................................................................2612.00200000000200000000
..........GCATAT----------A--A-----AA-CGAACATGT--GGGAT-................................................................................................................................................................................................................................................................2412.00200000000000002000
..........................................................................................................................................................................................................................................................CCATTCCTTGTAGTTGCACTG........................................2112.00202000000000000000
............................................TGT--GGGAT-CTAGGATTAACGATTAAAG.............................................................................................................................................................................................................................................2712.00200000020000000000
..............................................................................................................................TCTATTGACGCTCACATTGA-ACAGT...............................................................................................................................................................2512.00200000002000000000
..........GCATAT----------A--A-----AA-CGAACATGT--GGGAT-CTAGG...........................................................................................................................................................................................................................................................2912.00200000020000000000
...............T----------A--A-----AA-CGAACATGT--GGGAT-CTAGGATT........................................................................................................................................................................................................................................................2712.00200000001100000000
...............................................................................................................................................TGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGA.................................................................................................................2912.00200000020000000000
..TGGC--GAGCATAT----------A--A-----AA-CGAACATGT--GGGA..................................................................................................................................................................................................................................................................2912.00200000011000000000
..............................................................................................................................................TTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGA.................................................................................................................3012.00200000020000000000
........................................................................................................................................................................................................................................................................TGCACTGTAACAATTTATACAACTTAA....................2712.00200000000000002000
............................................TGT--GGGAT-CTAGGATTAACGATTA................................................................................................................................................................................................................................................2412.00200000010010000000
.............................................................................................................................................................................................................................................................TTCCTTGTAGTTGCACTGTAACAAT.................................2512.00200000011000000000
............................................................................................................................................................................................................................................................ATTCCTTGTAGTTGCACTGTAAC....................................2312.00200200000000000000
..............................................................................................................................................................................................................................................................TCCTTGTAGTTGCACTGTAACAA..................................2312.00200000000100010000
.................................................................................................................................................................................................................................ATAAACACCAAGGAGTCTGCTTCAGCCA..........................................................2811.00100000001000000000
..........................................................................................................................................................................................TTAATG-ATCGATTTTGCCGAT.......................................................................................................2111.00110000000000000000
......................................CGAACATGT--GGGAT-CTAGGATTAACGAT..................................................................................................................................................................................................................................................2811.00100000010000000000
.....................................................................................................................................................................................................................................................TTCAGCCATTCCTTGTAGTTGCA...........................................2311.00100000000001000000
..........................................................................................................................................................................................................................................................CCATTCCTTGTAGTTGCACTGTAACAA..................................2711.00100000001000000000
............................................................................................................................................................................................................................................................ATTCCTTGTAGTTGCACTGTAACAATTT...............................2811.00100100000000000000
..................................................................................................................T------ATAAATCTATTGACGCTCACATTGA-ACAG................................................................................................................................................................3011.00100000010000000000
...................................................................................................................................................................................................................................................................GTAGTTGCACTGTAACAATTTATACAAC........................2811.00101000000000000000
......................................................................................................................................................................................................................................................TCAGCCATTCCTTGTAGTT..............................................1911.00100001000000000000
................................................................................................................................................................................................................................................................CTTGTAGTTGCACTGTAACAATTTA..............................2511.00100000010000000000
..............................................................................................................................................................................................................................................................TCCTTGTAGTTGCACTGTAA.....................................2011.00101000000000000000
....................................................................................................................................................................................................................................................................................ATTTATACAACTTATTTGAATC----TAA......2511.00100010000000000000
..................................................................................................................................................................................................................................TAAACACCAAGGAGTCTGCTTCAGCCAT.........................................................2811.00100000000000010000
...........................................................................................................................................................................................................................................................CATTCCTTGTAGTTGCACTGTAACAA..................................2611.00100000000010000000
...........................................................................................................................................................................................................................................................CATTCCTTGTAGTTGCACTGTAACAAT.................................2711.00100000000010000000
........................................................................................................................................................................................................................................................................TGCACTGTAACAATTTATACAACTTATT...................2811.00100000000100000000
.....................................................................................................................................................................................................................................ACACCAAGGAGTCTGCTTC...............................................................1911.00100000000001000000
................................................................................................................................................................................................................................TATAAACACCAAGGAGTCTGCTT................................................................2311.00100000000000010000
..................................................................................................................................................................................................................................TAAACACCAAGGAGTCTGCTTCAGC............................................................2511.00100010000000000000
.....................................................................................................................................................................................................................................................TTCAGCCATTCCTTGTAGTTGCACTGTA......................................2811.00100000000000010000
................................................................................................................................................................................................................................TATAAACACCAAGGAGTCTGCTTC...............................................................2411.00100000000000010000
.........................................ACATGT--GGGAT-CTAGGATTAA......................................................................................................................................................................................................................................................2111.00100000000000001000
........................................................................................................................................................................................................................................................................................ATACAACTTATTTGAATC----TAAAGTGC.2611.00100000000001000000
........................................................................................................................................................................................................................................................................TGCACTGTAACAATTTATACAACTT......................2511.00100000000000010000
..................................................................................................................................................................................................................................TAAACACCAAGGAGTCTGCTTCAGCCA..........................................................2711.00100000010000000000
............................................................................TGATAACATTTTTACGTAATTAT....................................................................................................................................................................................................................2311.00100000001000000000
...............T----------A--A-----AA-CGAACATGT--GGGAT-CTAGG...........................................................................................................................................................................................................................................................2411.00100000001000000000
.........................................ACATGT--GGGAT-CTAGGATTAACGA...................................................................................................................................................................................................................................................2411.00100000000000010000
..............................................................................................................................TCTATTGACGCTCACATTGA-ACAGTTCA............................................................................................................................................................2811.00100000010000000000
............................................................................................................................................................................................................................................................ATTCCTTGTAGTTGCACTGTAACAATTTA..............................2911.00100000001000000000
..........................................................................................................................................................................................TTAATG-ATCGATTTTGCCG.........................................................................................................1911.00100100000000000000
.............TAT----------A--A-----AA-CGAACATGT--GGGAT-CTAGG...........................................................................................................................................................................................................................................................2611.00100000001000000000
..........................................................................................................................................................................................................................................................CCATTCCTTGTAGTTGCACTGTAACAATT................................2911.00100000001000000000
..............................................................................................................................TCTATTGACGCTCACATTGA-ACAGTT..............................................................................................................................................................2611.00100000010000000000
........................................................TAGGATTAACGATTAAAGTATGATAACATT.................................................................................................................................................................................................................................3011.00100000010000000000
....................................................................................................................................................................................................................................AACACCAAGGAGTCTGCTTCAGCCAT.........................................................2611.00100000001000000000
..............................................................................................................................................................................................................................TTTATAAACACCAAGGAGTCTGCTTC...............................................................2611.00100010000000000000
..................................................................................................................................................................................................................................TAAACACCAAGGAGTCTGC..................................................................1911.00100000000001000000
.............................................................................................................................ATCTATTGACGCTCACATTGA-ACAGTT..............................................................................................................................................................2711.00100000010000000000
........................................AACATGT--GGGAT-CTAGGATTAACGAT..................................................................................................................................................................................................................................................2611.00100000010000000000
............................................TGT--GGGAT-CTAGGATTAACGATTAAAGTA...........................................................................................................................................................................................................................................2911.00100000010000000000
......................................................................................................................................................................................................................................................................................TTATACAACTTATTTGAATC----TAAAGT...2611.00100000001000000000
..................................................................................................................................................................................................................................TAAACACCAAGGAGTCTGCTTCAG.............................................................2411.00100000000000010000
................................................................................................................................TATTGACGCTCACATTGA-ACAGT...............................................................................................................................................................2311.00100000010000000000
.....................................................T-CTAGGATTAACGATTAAAGTATGAT.......................................................................................................................................................................................................................................2611.00100000000001000000
.............................................................................................................................................................................................................................ATTTATAAACACCAAGGAGTCTGCT.................................................................2511.00100000000000010000
.............TAT----------A--A-----AA-CGAACATGT--GGGAT-CTAGGG..........................................................................................................................................................................................................................................................2711.00100000000000001000
.................................................GGGAT-CTAGGATTAACGATTAAAGTATGA........................................................................................................................................................................................................................................2911.00100000010000000000
.......................................................................................................................................................................................................................................................................................TATACAACTTATTTGAATC----TAAAGTGTA2811.00100000000001000000
............................................TGT--GGGAT-CTAGGATTAACGATT.................................................................................................................................................................................................................................................2311.00100000000001000000
.............................A-----AA-CGAACATGT--GGGAT-CTAGGATTAA......................................................................................................................................................................................................................................................2711.00100000000000010000
droSec2
CATGGC--GAGCATAT----------A--A-----AA-CGAACATGT--GGGAT-CTAGGATTAACGATTAAAGTATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATATA--TATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................TGCACTGTAACAATTTATACAACT.......................2411.0011000
.............................................................................................................................................................................................................................................................TTCCTTGTAGTTGCACTGTAACAATT................................2611.0011000
................................................................................................................................................................................................................................................TCTGCTTCAGCCATTCCTTGTAGTTGCAC..........................................2911.0011000
.................................................................................................................................................................................................................................ATAAACACCAAGGAGTCTGCTTCAGC............................................................2611.0011000
.............................................................................................................................ATCTATTGACGCTCACATTGA-ACA.................................................................................................................................................................2411.0010010
...............................................................................................................................................................................................................................................................CCTTGTAGTTGCACTGTAACAATT................................2411.0011000
...............................................................................................................TTAT------ATAAATCTATTGACGCT.............................................................................................................................................................................2111.0010100
........................................AACATGT--GGGAT-CTAGGA..........................................................................................................................................................................................................................................................1811.0011000
dm3
CATGGC--GAGCATAT----------A--T-----AA-CGAACATGT--GGGAT-CTAGGATTAACGATTAAAGTATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA----------------------AAAA-TTAATG-ATCGATTTTGCCGATATA--TATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................ACATGT--GGGAT-CTAGGATTAACGAT..................................................................................................................................................................................................................................................25141.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000001000000000001000001000001000001001100000000000000000000000000000000000000000000000000000000000000000000000300000001000000000000000232400000
..........................................CATGT--GGGAT-CTAGGATTAACGATT.................................................................................................................................................................................................................................................25140.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010001000000000001000002000100000000000000000000000000000000000000000000000000000000000000000000000300000000010000100000000512200000
..................................................................................................................................................................................................................................TAAACACCAAGGAGTCTGCTTCAGCCAT.........................................................28117.001700000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011300000
.............................................................................................................................................................................................................................................................TTCCTTGTAGTTGCACTGTAACAATT................................26116.00160000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040302120000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
................................................................................................................................................................................................................................TATAAACACCAAGGAGTCTGCTTCAGC............................................................27116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000100102000000000000000000000000000000000000000000000000000000000000000000000000030000001000000000000000000600000
.............................T-----AA-CGAACATGT--GGGAT-CTAGGATT........................................................................................................................................................................................................................................................25116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000203110000000000000000000000000000000000000000000000000000000000000000000000010010100000000000000000001300000
........................................AACATGT--GGGAT-CTAGGATTAACGAT..................................................................................................................................................................................................................................................26116.001600000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010011100000
..................................................................................................................................................................................................................................TAAACACCAAGGAGTCTGCTTCAGC............................................................25114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000500000
.........................................ACATGT--GGGAT-CTAGGATTAACGATT.................................................................................................................................................................................................................................................26114.001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000001001100000
..........................................CATGT--GGGAT-CTAGGATTAACGAT..................................................................................................................................................................................................................................................24113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001030000000000000000000000010800000
.......................................................................................................................................................................................................................TACAACATTTATAAACACCAAGGAGTC.....................................................................27113.00130000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000010000100000000000000000010700000
..............................................T--GGGAT-CTAGGATTAACGATTAAAG.............................................................................................................................................................................................................................................25111.00110000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000002000000000000000000010101000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010100000
..............................................................................................................................................................................................................................................................TCCTTGTAGTTGCACTGTAACAATTTA..............................27110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000010000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000
..............................................................................................................................................................................................................................TTTATAAACACCAAGGAGTCTGCTTC...............................................................2619.0090000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000
...............T----------A--T-----AA-CGAACATGT--GGGAT-CTAGGATT........................................................................................................................................................................................................................................................2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000010001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000
...............................................................................................................................................................................................................................TTATAAACACCAAGGAGTCTGCTTC...............................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................T-CTAGGATTAACGATTAAAGTATGA........................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................................................................................................TCCTTGTAGTTGCACTGTAACAATT................................2517.0070000000000000000000000000000000000000000000000000000100000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................TCTATTGACGCTCACATTGA-ACAGT...............................................................................................................................................................2516.0060000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................TTCCTTGTAGTTGCACTGTAACAAT.................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000000000000010100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TATAAACACCAAGGAGTCTGCTTC...............................................................2416.0060000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................AACACCAAGGAGTCTGCTTCAGCCAT.........................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000300000
.......................................................................................................................................................................................................................................................................................TATACAACTTATTTGAATC----TAAAGT...2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................CATTTATAAACACCAAGGAGTCTGC..................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000300000
.....................................................T-CTAGGATTAACGATTAAAGTATGAT.......................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000010000000000000000000000000300000
............................................TGT--GGGAT-CTAGGATTAACGATT.................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000
......................................................................................................................................................................................................................................CACCAAGGAGTCTGCTTCAGCCATT........................................................2515.0050000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................T--GGGAT-CTAGGATTAACGAT..................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CACCAAGGAGTCTGCTTCAGCCAT.........................................................2415.0050000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
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..............................................................................................................................................................................................................................................................TCCTTGTAGTTGCACTGTA......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................T-----AA-CGAACATGT--GGGAT-CTAGGA..........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TGTAGTTGCACTGTAACAA..................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CTCACATTGA-ACAGTTCATAAA----------------------AAAA-T............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AACATGT--GGGAT-CTAGGATTAACGA...................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TACGTAATTATTTATTACAATATT.......................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................T-----AA-CGAACATGT--GGGAT-CTAGG...........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................A-CGAACATGT--GGGAT-CTAGGATT........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TGCCGATATA--TATACAACATTTATAA..................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TGCCGATATA--TATACAACATTTATA...................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AA-TTAATG-ATCGATTTTGCCGAT.......................................................................................................2311.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....C--GAGCATAT----------A--T-----AA-CGAACATGT--GGGAT-C...............................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GTCTGCTTCAGCCATTCCTTGT..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AA-CGAACATGT--GGGAT-CTAGGA..........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.........................................................................................................................................................................................................................................CAAGGAGTCTGCTTCAGCCATTCCTTG...................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TATAAACACCAAGGAGTCTGCTTCAG.............................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TCCTTGTAGTTGCACTGTAACAATTTATA............................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TTTTACGTAATTATTTATTACAATATT.......................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CATTGA-ACAGTTCATAAA----------------------AAAA-TTAA.........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................ATGT--GGGAT-CTAGGATTAACGA...................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TCACATTGA-ACAGTTCATAAA----------------------AA................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................ATAAA----------------------AAAA-TTAATG-ATCGATTTTGCCGA........................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CCATTCCTTGTAGTTGCACTGTAACAA..................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CTATTGACGCTCACATTGA-ACAGT...............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................GAACATGT--GGGAT-CTAGGATTAACGAT..................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................GATTAACGATTAAAGTATGATAACATT.................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGATAACATTTTTACGTAATTAT....................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TCTGCTTCAGCCATTCCTTGTAGTTGT............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................A--T-----AA-CGAACATGT--GGGAT-CTAGGATT........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................................................................................................................................................................................................TTCAGCCATTCCTTGTAGTT..............................................2011.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TGT--GGGAT-CTAGGATTAACGC...................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AATATTTAT------ATAAATCTATTGACGCT.............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........AGCATAT----------A--T-----AA-CGAACATGT--GGGAT-CTAG............................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CATGGA--GAACATAT----------AA-A-----AA-CCAACATGT--GGGAA-CTAGGATTAACGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................ATATGATAACATTTTTACGT..........................................................................................................................................................................................................................2012.0020000200
..................................................................................................................................................................................................................................................TGCTTCAGCCATTCCTTGTAGTTGCAC..........................................2711.0011000000
.............................................GT--GGGAA-CTAGGATTAACGATT.................................................................................................................................................................................................................................................2211.0010000100
.....................................................................................................................................................................................................................................................TTCAGCCATTCCTTGTAGTTGCACTG........................................2611.0011000000
..............................................................................................................................TCTATTGACGCTCACATTGA-....................................................................................................................................................................2011.0010100000
...................................................................................................................................TGACGCTCACATTGA-ACAGTTCATA..........................................................................................................................................................2511.0011000000
.......................................................................................................................................................................................................................................................................................TATACAACTTATTTGAATC----TAAAGT...2511.0010000100
......................................................................................................................................................................................................................................................TCAGCCATTCCTTGTAGTTGCACTGT.......................................2611.0011000000
.............................................................................................................................................................................................................................ATTTATAAACACCAAGGA........................................................................1811.0010000010
............................................................................................................................................................................................AATG-ATCGATTTTGCCGAT.......................................................................................................1911.0010000100
.............................................GT--GGGAA-CTAGGATTAACGAT..................................................................................................................................................................................................................................................2111.0010000010
...............................................................................................................................................................................................................................................GTCTGCTTCAGCCATTCCTTGTAGTT..............................................2611.0011000000
................................................................................................................................................................................................................................TATAAACACCAAGGAGTCTGCTTC...............................................................2411.0011000000
droYak3
CATGGA--GAGCATAT----------A--A-----AA-CCAACATGT--GGGAA-CTAGGATTAACGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................GATTAAAATATGATAACATTTTTACGT..........................................................................................................................................................................................................................2711.00100000010000
......................................................................................................................................................................................AAA-TTAATG-ATCGATTTTGCCGAT.......................................................................................................2411.00100000010000
........................................AACATGT--GGGAA-CTAGGAT.........................................................................................................................................................................................................................................................1911.00101000000000
......................................................................................................................................................................................................................ATACAACATTTATAAACACCAAGGA........................................................................2511.00101000000000
............................................................................................................................................................................................................................................................ATTCCTTGTAGTTGCACTGTAACA...................................2411.00100100000000
..........................................CATGT--GGGAA-CTAGGATT........................................................................................................................................................................................................................................................1811.00101000000000
........................................................................................................................................................................................................................................................................................ATACAACTTATTTGAATC----TAAAGT...2411.00100000010000
................................................................................................................................................................................................................AT----ATACAACATTTATAAACACCAAGGA........................................................................2711.00101000000000
...............................................................................................................................................................................................................................TTATAAACACCAAGGAGTC.....................................................................1911.00101000000000
.............................................................................................................ATTTAT------ATAAATCTATTGACGC..............................................................................................................................................................................2211.00101000000000
droEug1
CATGAAACAAACATAT----------A--A-----AA-CAAACATTT--GGGAA-CTAGGATTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotal
No Reads
droBia1
CATGAA--GAACATAT----------A--AAACAATA-CAAACATGT--GGGAA-CTAGGCTTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA----------------------CAAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTGAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotal
No Reads
droTak1
CATGAA--GAACATAT----------A--AATCAAAT-CGAGCATGT--GGGAA-CTAGGATTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA----------------------CAAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotal
No Reads
droEle1
CATGAA--GAACATAT----------ATAA-----AA-CGAACATGT--GGGA--CTAGGATTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA----------------------CAAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotal
No Reads
droRho1
CATGAA--GAACATAT----------A--A-----AA-CGAACATGT--GGGAA-CTAGGATTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotal
No Reads
droFic1
CATGAA--GAACATAT----------A--A-----AA-CGAACATGT--GGGAA-ATAGGATTAATGATTAAAGTATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA-----------------------AAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotal
No Reads
droKik1
CATGAA--GAACATAC----------A--A-ACAAAA-CGAACATGTGTGGGAATTTAGGATTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATATA-----------------------AAG-ATAATG-ATCGATTTTGCCGATATACATATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotal
No Reads
droAna3
CATGAA--GAACATAT----------A--A-----A--AGAACATGT--GGGAA-ATAGGATTAATGATTAAAATATGATAACATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA----------------------CAAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................A-TTAATG-ATCGATTTTGCC..........................................................................................................1911.001010000
...............................................................................................................................................................................................................................TTATAAACACCAAGGAGTCTGCTTCAGC............................................................2811.001000100
...............................................................................................................................................................................................................................................GTCTGCTTCAGCCATTCCTTGTAGTTGC............................................2811.001100000
............................................................................................................................AATCTATTGACGCTCACATTGA-AC..................................................................................................................................................................2411.001100000
.............................A-----A--AGAACATGT--GGGAA-ATAGGA..........................................................................................................................................................................................................................................................2211.001010000
............................................................................................................................................................................................................................................................ATTCCTTGTAGTTGCACTGTAACAA..................................2511.001010000
droBip1
CATGAA--GAACATAT----------AT-A-----AA-AGAACATGT--GGGAA-ATAGGATTAATGATTAAAATATGATACAATTTTTACGTAATTATTTATTACAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGTTCATAAA----------------------CAAA-TTAATG-ATCGATTTTGCCGATAT----ATACAACATTTATAAACACCAAGGAGTCTGCTTCAGCCATTCCTTGTAGTTGCACTGTAACAATTTATACAACTTATTTGAATC----TAAAGTGTASizeHit CountTotal NormTotal
No Reads
dp5
CATGAT--AAATATAG----------A--AAATAACACCAAACAAGT--GGGAA-TTAGGATAAATGATTAAAATATGAT----TTTTTACGTAATTATTTATTTTAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGGACATACT----------------------AAAA-CTAATG-ACCGATTT-------------GTACAAGATTTCAAAACATCAAGGAACTTTCTTATTTCATTCCTTGTAGTTGCACTGTAACAAATTATAAGAGTTATCTGAATCTAAATAATTTTTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................TAACAAATTATAAGAGTTATCTGAATC.............2715.0050000000410
...................................................................................................................................TGACGCTCACATTGA-ACAGGACATAC.........................................................................................................................................................2614.0040000000040
................................................................................................................TAT------ATAAATCTATTGACGCTCAC..........................................................................................................................................................................2312.0020200000000
...............................................................................................................................CTATTGACGCTCACATTGA-ACAGGA..............................................................................................................................................................2511.0010000000001
........................................................................................................................................................................................................T-------------GTACAAGATTTCAAAACATCAAGGAAC......................................................................2811.0010000000010
.......................................AAACAAGT--GGGAA-TTAGGATAAAT.....................................................................................................................................................................................................................................................2411.0010100000000
..............................................................................................................................................................................................TG-ACCGATTT-------------GTACAAGATTTCA....................................................................................2311.0010100000000
.........................................................................................................................................................................................................................................................TTCATTCCTTGTAGTTGCACTGTAACA...................................2711.0010100000000
..............................................T--GGGAA-TTAGGATAAATGATTAAAATA...........................................................................................................................................................................................................................................2711.0010000000010
........................................AACAAGT--GGGAA-TTAGGATAAATGA...................................................................................................................................................................................................................................................2511.0010010000000
..........................................................................................................AATATTTAT------ATAAATCTATTGAC................................................................................................................................................................................2311.0010010000000
......................................................................................................................................................................................................................GTACAAGATTTCAAAACATCAAGG.........................................................................2411.0010000100000
..............................................................................................................................................................................................................................TTTCAAAACATCAAGGAACTTTCT.................................................................2411.0010000000100
................................................................................................................................TATTGACGCTCACATTGA-ACAGGACA............................................................................................................................................................2611.0010000000010
........................................................TAGGATAAATGATTAAAATATGAT----T..................................................................................................................................................................................................................................2511.0010100000000
....................................................................................................................................GACGCTCACATTGA-ACAGGACAT...........................................................................................................................................................2311.0010000100000
..........................................................................................................................................................................................................................................................TCATTCCTTGTAGTTGCACTG........................................2111.0010100000000
..............................................................................................................................................................T----------------------AAAA-CTAATG-ACCGATTT-------------GTACAAGAT........................................................................................2811.0010100000000
droPer2
CATGAT--AAATATAG----------A--AAATAACACCAAACAAGT--GGGAA-TTAGGATAAATGATTAAAATATGAT----TTTTTACGTAATTATTTATTTTAATATTTAT------ATAAATCTATTGACGCTCACATTGA-ACAGGACATACT----------------------GAAA-CTAATG-ACCGATTT-------------GTACAAGATTTCAAAACATCAAGGAACTTTCTTATTTCATTCCTTGTAGTTGCACTGTAACAAATTATAAGAGTTATCTGAATCTAAATAATTTTCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................TTCATTCCTTGTAGTTGCACTGTAACAA..................................2812.002200000
.......................................................................................................................................GCTCACATTGA-ACAGGACA............................................................................................................................................................1911.001100000
............................................................................................................................................................ACT----------------------GAAA-CTAATG-ACCGATTT-------------GTA..............................................................................................2411.001100000
..............................................................................................................................TCTATTGACGCTCACATTGA-ACAGGACA............................................................................................................................................................2811.001010000
............................................................................................................................................................................................................................................................ATTCCTTGTAGTTGCACTGTAAC....................................2311.001001000
.....................................................................................................................................................................................................................................................TTATTTCATTCCTTGTAGTTGCACTG........................................2611.001010000
droWil2
AATCCG--AAACATAGAATTAAGCTGA--AAATTAAA-CCAACAAGT--GGTAA-TTAGAATTAAGTATTAAAATACGATAACATTTTTACGTAATTATTTATTACTATATTTATATATATATAAATCGATTGACGCTTTCATTGA-ACAGTTCATAAAACAAAAACAAAAACCACAACACAAAA-TTAATGGATCGATTT-------------ATCCACCATGTATA---ATCAAGGGGTTTGCTTCAGTCATTCCTTGTAGCTGCACTGTAACAATTTATAAAAGTTATTTGAATTCATATAAAGTATASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................ACAAAAACCACAACACAAAA-T............................................................................................................................2111.00101000
....................................................................................................................................GACGCTTTCATTGA-ACAGTT..............................................................................................................................................................2011.00100010
...................................................................................................................................................................................................................................A---ATCAAGGGGTTTGCTTCAGTC...........................................................2211.00100010
...............................................................................................................................CGATTGACGCTTTCATTGA-ACAGTT..............................................................................................................................................................2511.00110000
....................................................................................................................TATATATAAATCGATTGACGC..............................................................................................................................................................................2111.00100100
........................................................................................................................................................................................................................................................AGTCATTCCTTGTAGCTGCAC..........................................2111.00100010
...............................................................................................................................................................................................................................................GTTTGCTTCAGTCATTCCTTG...................................................2111.00101000
................................................................................................................................................................................AACACAAAA-TTAATGGATCGATTT-------------ATC..............................................................................................2711.00100010
droVir3
GA---------------------------AAATAAAG-CCAACAACC--GGTAA-TTAGGTATAAATACAATAATATGATAACATTTTTATGTAATTTATTATTA------TTAT------ATAAATCGATCGACGCTTTCATTGA-ACGGTTCATTCG-----------------------AATTTAATTCAA---------TCGATTT----GTACACAATTTAAAGTC---A-AGAGTTTACTTGATTCATTCCTTGTAGCTGCACTGCTAATATTTATTTAACCTATTTCA-TCTATATAAAGTCTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................GATTCATTCCTTGTAGCTGCACTGCTAAT...................................2912.002001100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TGATTCATTCCTTGTAGCTGCACTGC.......................................2612.002000000000000000000000000001010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................CTAATATTTATTTAACCTATTTCA-TCT............2712.002000000000000000000000000000200000000000000000000000000000000000
...........................................................................................................................................TCATTGA-ACGGTTCATTCG-----------------------AATTTAAT.........................................................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................TA------TTAT------ATAAATCGATCGACGCTTTC..........................................................................................................................................................................2611.001000000000000000000000000000000010000000000000000000000000000000
........................................................................................................A------TTAT------ATAAATCGATCGACGCT.............................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TAACCTATTTCA-TCTATATAAAGT...2411.001000010000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TACACAATTTAAAGTC---A-AGAGTTTACT.................................................................2711.001000010000000000000000000000000000000000000000000000000000000000
.........................................................................ATATGATAACATTTTTATGT..........................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................TTATTA------TTAT------ATAAATCGATCGACGC..............................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................TTGA-ACGGTTCATTCG-----------------------AATTTAATT........................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................TTCATTGA-ACGGTTCATTCG-----------------------AAT..............................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................A---------TCGATTT----GTACACAATTT......................................................................................1911.001000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................................CGACGCTTTCATTGA-ACGGTT..............................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................TGATTCATTCCTTGTAGCTGCA...........................................2211.001000000010000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TGCACTGCTAATATTTATTTAACCTAT....................2711.001000000000000000000000000000100000000000000000000000000000000000
................................TAAAG-CCAACAACC--GGTAA-TTAGGTA.........................................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
........................................AACAACC--GGTAA-TTAGGTATAAATACA.................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................................................................TTGATTCATTCCTTGTAGCTGCACTGC.......................................2711.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TTCATTCCTTGTAGCTGCACTGCTAA....................................2611.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TACTTGATTCATTCCTTGTAGCTGCA...........................................2611.001000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TTACTTGATTCATTCCTTGTAGCTGCACC.........................................2911.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................ATTGA-ACGGTTCATTCG-----------------------A................................................................................................................................1811.001000000000000000000000000000000001000000000000000000000000000000
droMoj3
AAAATT--AAGC--TG----------A--AAATAAAG-CCAACAACC--GATAA-TTAGGTTTAACTACAATAATATGATAACATTTTTATGTAATT---TAT---TATATTTAT------ATAAATCGATTGACGCTTTCATTGAAACGGTTCATCAA-----------------------ATT-TTATTGAATCGATT---------T----GTACACAATTTAAA---GTCAAGG-GTTTACTTGATTCATTCCTTGTAGCTGCACTGCTAATATTTATAAAACTAATTTTCATCAATATAAAGTGTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................TTAT------ATAAATCGATTGACGC..............................................................................................................................................................................2011.001100000
.......................................CAACAACC--GATAA-TTAGGT..........................................................................................................................................................................................................................................................1911.001100000
droGri2
GA---------------------------AAATAAAG-CCAACAACC--GGTAA-TTAGGTTTAACTACAATAATATGATAACATTTTTATGTAATT------TATTATATTTAT------ATAAATCGATTGACTCTTTTTTTGA-ACAGTTCATTCA----------------------AATA-TTATTGAATCGATT---------T----GTACACAATTTAAA---GTCAAGG-GTTTACTTGTTTCATTCCTTGTAGCTGCACTGCTAATATTAATAAAACTTATTTTCATCTATATAAAGTGTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 11:41 AM