ID:

dsi_16539

 Coordinate:

2l:6799103-6799340 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-70.3 -70.2 -69.9

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+

Sense Strand Reads

AAGCAGCGCGGAGAAAAAAAAATGGCAAACACAAGCCAACTACAACAAATGTAGGTACCACACAGCAACAACAACAATTAGAGGGGCTAATATAGGGCCGAAAATGAAAATTCAATAATTTGACGCCTTGGCGCAAAGGTTAGTTTTTCCAAGAGCTGTGAAAATTATTATGAAATGTGAGAAGTGCGCGCCTGTGTGTGTTTTATAATTCCCGCACACACACGCACAGCTGCGCCCCCGCAAATTTGTGTGCGTGAGTGTTCACGTGTGTGTGTGTGGGCGAGTGTGTTCATTTTTTTGACCTCCCCCAAACAGCATCCCCCGCCCACCGCCCCACC
**************************************************........(((((............(((((..(((((..(((((((((((..........(((((((((((.(((((((((...((((.....)))).))))).)).))..)))))))..))))..........)).)).)))))))..))))).)))))(((((((((((((((((((.((((....))))...))))))((((((....)))))))))))))))))))...)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 O002
Head
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 M023
head
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
.......GCGTAGAAAAAAAAATGGCAAACACAAGC.............................................................................................................................................................................................................................................................................................................. 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................AGCAAAAACAACAATTAGAGGGG............................................................................................................................................................................................................................................................ 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0
.....................................................................................................................ATTTGACGCCTTGGCGCA........................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................................................................ATAATTTGACGCCTTGGC.............................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................AATTGAAGAATTTGACGCC................................................................................................................................................................................................................... 19 2 3 0.33 1 0 0 0 0 0 1 0 0 0
.AGCAGGGGGGAGAAAAAAAAA............................................................................................................................................................................................................................................................................................................................ 21 2 3 0.33 1 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................................................................................GAGTGTGTTCATTTTT......................................... 16 0 5 0.20 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................GGCGCAAAGGTTCGT.................................................................................................................................................................................................. 15 1 14 0.14 2 0 0 0 0 2 0 0 0 0
................................................................................................................................TGGCGCAAAGGTTCGT.................................................................................................................................................................................................. 16 1 9 0.11 1 0 0 0 0 1 0 0 0 0
................................................................................................................................................TTTTCGAACAGCTGTGAAA............................................................................................................................................................................... 19 2 11 0.09 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................................TGTTAGTTTTTCCAAG......................................................................................................................................................................................... 16 1 13 0.08 1 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................................................................................................................GCGTGAGTGTTCCCGTT...................................................................... 17 2 16 0.06 1 0 0 0 0 1 0 0 0 0
..................................................................................................................................................TTCCAAGAGCTGCTAAAA.............................................................................................................................................................................. 18 2 19 0.05 1 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................................TTATGAAATTTGAGA............................................................................................................................................................ 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTCGTCGCGCCTCTTTTTTTTTACCGTTTGTGTTCGGTTGATGTTGTTTACATCCATGGTGTGTCGTTGTTGTTGTTAATCTCCCCGATTATATCCCGGCTTTTACTTTTAAGTTATTAAACTGCGGAACCGCGTTTCCAATCAAAAAGGTTCTCGACACTTTTAATAATACTTTACACTCTTCACGCGCGGACACACACAAAATATTAAGGGCGTGTGTGTGCGTGTCGACGCGGGGGCGTTTAAACACACGCACTCACAAGTGCACACACACACACCCGCTCACACAAGTAAAAAAACTGGAGGGGGTTTGTCGTAGGGGGCGGGTGGCGGGGTGG
**************************************************........(((((............(((((..(((((..(((((((((((..........(((((((((((.(((((((((...((((.....)))).))))).)).))..)))))))..))))..........)).)).)))))))..))))).)))))(((((((((((((((((((.((((....))))...))))))((((((....)))))))))))))))))))...)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 O002
Head
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M023
head
...................................................................................................................................................................................................................GGCGTGTGTGTGCGTGTC............................................................................................................. 18 0 1 2.00 2 0 2 0 0 0 0 0 0
.........................................................GGCGTGTCGTTGTTGTTGT...................................................................................................................................................................................................................................................................... 19 1 9 1.78 16 11 0 0 0 3 2 0 0
...........................................................................................................................................................................................................................................................................................................CTGGAGGGGGTTTGTCGTAGG.................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................GGGCGGGTGGCGGGGT.. 16 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................GGCGTGTCGTTGTTGTTGTT..................................................................................................................................................................................................................................................................... 20 1 8 0.75 6 6 0 0 0 0 0 0 0
.................................................................................................................................CCGCGTTTCCAAGCAA................................................................................................................................................................................................. 16 1 7 0.29 2 0 0 0 2 0 0 0 0
.......................................................AGGGCGTGTCGTTGTTGTTGT...................................................................................................................................................................................................................................................................... 21 2 7 0.29 2 1 0 0 0 0 1 0 0
........................................................TGGCGTGTCGTTGTTGTTGT...................................................................................................................................................................................................................................................................... 20 1 5 0.20 1 1 0 0 0 0 0 0 0
......................................................................TGTTGTTAATCTCACCG........................................................................................................................................................................................................................................................... 17 1 6 0.17 1 0 0 0 1 0 0 0 0
...............................................................................................................................................AAAAAGGAGCTCGACACT................................................................................................................................................................................. 18 2 16 0.13 2 0 0 0 1 1 0 0 0
.................................................................................................................................CGGCGTTTCCAATCA.................................................................................................................................................................................................. 15 1 8 0.13 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................GTGGGCGGGTGGCGGCGTG. 19 2 8 0.13 1 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................................................................................................................AGGGGATGGGTGGCGGGGTC. 20 3 12 0.08 1 0 0 0 0 0 0 0 1
........................................................TGGCGTGTCGTTGTTGTT........................................................................................................................................................................................................................................................................ 18 1 14 0.07 1 1 0 0 0 0 0 0 0
................................................................................................................................GCCGCGTTTCCAAGCAA................................................................................................................................................................................................. 17 2 16 0.06 1 0 0 0 1 0 0 0 0
.........................................................GGCGTGTCGTTGTTGTTG....................................................................................................................................................................................................................................................................... 18 1 18 0.06 1 0 0 0 0 1 0 0 0
........................................................GGGCGTGTCGTTGTTGTTGTT..................................................................................................................................................................................................................................................................... 21 2 20 0.05 1 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................................................................................................................AAAAACTGTAGGCGGTTT.......................... 18 2 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:6799053-6799390 + dsi_16539 AAGCAGCGC----GG--A-----G-A-AA------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATGTAGGTACCAC------AC-----AGCAA---------------------------------------------------CAACAACAATTA-GAGGGGCT-----AAT--------ATAG--GGCCGAAAATGAAAATTCAATAATTTGAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTCC------A--AG---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGCG----------------------CGC-------------------------CTGT---GTGTGTTTTATAATT----------------------------CCCG----------CACACAC------------ACGCACA-----------------------------GCTGCGCCCCCGCAAATTTGTGTGCGTGAGTGTTCACGTGTGTGTGTG--TG-GGCGAGTGTGTTCATTTTTTTGACCTCCCCCA------------A---ACAGCATCCCCC------GC-------CCACCG-----CC--------CC----ACC
droSec2 scaffold_3:2563133-2563467 + AAGCAGCGC----GG--A-----G-A-AA------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATGTAGGTACCAC------AC-----AGCAA---------------------------------------------------CAACAACAATTA-GAGGGGCT-----ATT--------ATAG--GGCCGAACATGAAAATTCAATAATTTGAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTCC------A--AG---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGCG----------------------CGC-------------------------CTGT---GTGTGTTTTATAATT----------------------------CCCG----------CACACAC------------ACGCACA-----------------------------GCTGCGCCCCCGCAAATTTGTGTGCGTGAGT-TTCATGTGTG--TGTG--TG-GGCGAGTGTGTTCATTTTTTTGACCTCCCCCA------------A---ACAGCATCCCCC------GC-------CCACCG-----CC--------CC----ACC
dm3 chr2L:7038229-7038564 + AAGCAGCGC----GG--A-----G-A-AA------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATGTAGGTACCAC------AC-----AGCAA---------------------------------------------------CAACAACAATTA-GAGGGGCT-----ATT--------ATAG--GGCCGAAAATGAAAATTCAATAATTTGAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTCC------A--AG---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGCG----------------------CGC-------------------------CTGT---GTGTGTTTTATAATT----------------------------CCCA----------CACACAC------------ACGCACA-----------------------------ACTGCGCCCCCGCAAATTTGTGTGCGTGAGTGTTCATGTGTG--TGTA--TG-GGCGAGTGTGTTCATTTTTTTGACCTCCCCCA------------A---ACAGCATCCCCC------GC-------CCACCG-----CC--------CC----ACC
droEre2 scaffold_4929:15948765-15949075 + AAGCAGCGC----GG--A-----G-A--A------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATGTAGGTACCAC------AC-----AGCAA---------------------------------------------------CAA---CAATTA-GAAGGGCT-----ATT--------ATAAGGGGCCGAAAATGAAAATTCAATAATTTGAC----GCCTT-GA---------------------CGCAAAGGTTAGTTTTTCT------A--AG---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGTG----------------------CGC-------------------------CT-----GTGTGTTTTATAATT----------------------------CCCG----------CACAC--------------ACGCACA-----------------------------GCTGCGCCCCCGCAAATTTGTGTGCGTGTG--------TG------T-------GCGAGTGTGTTCA-TTTTTTGACCTCCCCCA------------A---GCAGCATCCCCC---------------CCACCG-----CC--------CC----TCT
droYak3 2L:5875082-5875416 - AAGCAGCGC----GG--A-----G-A--A------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATGTAGGTACCAC------AC-----AGCAA---------------------------------------------------CAA---CAATTA-GAAGGGCT-----ACT--------ATAGGAGGCCCAAAATGAAAATTCAATAATTGAAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTCC------A--AG---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGTT----------------------CGC-------------------------CTGT---GTGTGTTTTATAATT----------------------------CCCG----------CACACAC------------ACGCACA-----------------------------GCTGCGCCCCCGCAAATTTGTGTGCGTGAGTGTTCATGTGTG--TGTGCGTGTGTCGAGTGTGTTC--ATTTTTGACCTCCCCCA------------A---GCAGCATCCCCC------GC-------CCACCG-----CC--------CC----TCT
droEug1 scf7180000409463:164822-165147 + AAGCAGCGC----GA--C-----G-A---------------AAAATATGGCAAACACAAG--C---CAACTACAACAAGAAATGTAGGTACCACC-----AC-----AACAA------------------------------------------------CAACAGCAACATAAA-GAAGGGCC-----ATT--------ATAG--AGCCGAAAATGAAAATTCAATAATTGGAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTGTCC------A--AG---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGCG----------------------TGCGT---------------------ATGTGT---GTATGTTTTATAATT----------------------------CCCG----------CACACAC--TCACACTAG--TGCACA-----------------------------GCTGCGCCCCCGCAAATTCGTGTACGT-------------------------------GTGTGTTCA-TTTTTTGACCTCCCCCA------------A---GCAGCATCCCCC------GT-------CCACCA-----CC--------CC----CAC
droBia1 scf7180000302422:8685018-8685334 + AAGCAGCGC----GA--C-----G-G---------------AAAAAATGGCAAACACAAG--CCAGCAACTACAACA---AATGTAGGTAGCAC---------------CAA---------------------------------------------------CAACGACTATTA-GAAGGGCC-----ATTT-------GTAG--GGCCGAAAATGAAAATTCAATAATCGGAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTCCT--GCGG--AA---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGCGTTTG------------------CGT-------------------------TTGT---GTGTGTTTTATAATT----------------------------CCCT----------CACACAC------ACCAG--CGCCCA-----------------------------GCTGCGCCCCCGCAAATTTGTGTGCGTATG----CGTGCG-----------------TGTGTGTTC--GTTTTTGACCTCCCCCA------------A---GCAGCATCCCCC-------------------------------------C----ACC
droTak1 scf7180000416008:304559-304863 + AAGCAGCGC----GA--C-----G-A--A------------AGAAAATGGCAAACACAAG--CCAGCAGCTACAACA---AATGTAGGTAGCAC---------------CAA---------------------------------------------------CAACAACTGATA-GAAGGGCC-----ATTT-------GTAG--GGCCGAAAATGAAAATTCAATAATTGGAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTGCC-----GTGAA---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGAGTG----------------------CGA-------------------------GTGT---GTGTGTTTTATAATT----------------------------CCCT----------CACACAC------ACCAG--CGCACA-----------------------------GCTGCGCCCCCGCAGATGCGTG------------CGTGTG-----------------TGTGTGTTC--GTTTTTGACCTCCCCCA------------A---GCAGCATCCCCC-------------------------------------C----ACC
droEle1 scf7180000490640:251131-251435 - AAGCAGCGC----AA--T-----G-A---------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATCTAGGTAC-------------------AA---------------------------------------------------CAACAACAAATA-GAAGGGGC-----AGT--------ATAA--AGCCCAAAATGAAAATTCAATAATTGCAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTCCA-----A--AG---------AGC-----T--GTGAA-ATTTATTATGAAAT--GTGAG--------------ACGTGTG----------------------TGT-------------------------GTGT---GTGTGTTTTATAATT----------------------------CCCG----------CACACAG------ACAAG--CGCACA-----------------------------GCTGCGCCCCCGCAAACTTGTA------------CATGTG-----------------TGTGTGACA--ATTTTTGACCTCCCCCA------------A---GCAGCATCCCCC------GC-------CCACTG-----CC--------CC----CAC
droRho1 scf7180000779930:145353-145647 + AAGCAGCGC----AA--C-----G-----------------AAAAAATGGCAAACACAAG--C---CAATTGCAACA---AATGTAGGTACTAC----------------AA---------------------------------------------------CAACAACA---T-GAAGGGTT-----ATT--------GTAG--AGTCGAAAATGAAAATTCAATAATTGGAC----GCCTT-GA---------------------CGCAAAGGTTAGTTTTTCC------G--AG---------AGC-----T--GTGAA-ATGTATTATGAAAT--GTGAG--------------ATGT-------------------------------------------------------GT---GTGTGTTTTATAATT----------------------------CCCG----------CACACAG------GCAA--ACGCACA-----------------------------GCTGCGCCCCCGCAAATTTGTG------------CTTGTG-----------------TGTGTGACA--ATTTTTGACCTCCCCCA------------A---GCAGCATCCTCC------AT-------CCACCG-----CC--------CC----CAC
droFic1 scf7180000454111:807362-807661 + AAGCAGCGC----TA--C-----G-----------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATGTAGGTACCA------------------A---------------------------------------------------CAACAACAAGAAAGA-AGGCC-----ATA--------ATAG--AGCCGAAAATGAAAATTCAATAATTGGAC----GCCTT-GG---------------------CGCATAGGTTAGTTTTTTCA--CCAA--AG---------AGC-----A--GTAAA-AATTATTATGAAAT--GTGAG--------------AAGTG-------------------------------------------------------T---GTGTGTTTTATAATT----------------------------CCTA----------CACACAT------------ACGCACA-----------------------------GCTGCGCCCCCGCAAATTGGAGCGCGTG--------TGTG-----------------TGCGTGATA--ATTTTTGACCTCCCCCA------------A---GCAGCATCCCCC------TC-------CCAGCG-----CC--------CA----CAG
droKik1 scf7180000302468:541826-542158 + AAGCAGCAC----AG--C-----G-ATGG------------AAAAAATGGCAAACACAAG--CGCACAACTACAACA---AATGTAGGTACCACAGGCAACTGAAGCAACAA---------------------------------------------------AAGC---AA-------CGGCC-AAGCAA-AGCAAAGAGTAG--GGCCG-AAATGAAAATTCAATAATTGGAC----GCCTT-GG---------------------CGCTAAGGTTAGTTTTTCC------GA-GA---------AG---------GGGAA-AACTATTATGAAAT--GTGAG--------------AAGTGTG----------------------CGCGA--------------------------A---CAGTGTTTTATAATT----------------------------CCCG----------CACACAC------ACAGG--CGCACA-----------------------------GCTGCGCCCACGCAAGATTGTG-----------------------------------TGTGTGCTC--ATTTTTGACCTCCCCCACGC---------A---CCAGCATCTCCATCCTTCATTCCCAGCC----------CC--------CC----ACC
droAna3 scaffold_12916:109575-109879 + AAGCAGCAC----GA--C-----G-A---------------AAAAAATGGCAAATACAAG--CGCACAAATACAACA---AATGTAGGTACCAGAGTA----GAAACGGCAA---------------------------------------------------CAA---CAATGA-AA---GCCA-AGCACT--------GTAG--GGTC-AACTAGAAAATTCAATAATCGGAC----GCCTT-GGCTGATTTT--------TC---CGCAAAGGTTAGTTTT-CC------G--AG---------AGC----------GAAGAGCTATTATGAAAT--GTGAGAGGACCAGC--A-GAAGTGT-----------------------------------------------------GA---CAGTGTTTTATAATT----------------------------C----------------------------------GCTCA-----------------------------GCTGCGCCCACGCAAGATTGTG---------------------------------------TTTAA--ATTTTTGACCTCCCCCA------------C---G---CATCCGCC------AC-------CC--CGCCTGGTC--------CC----ATC
droBip1 scf7180000396554:2171642-2171998 - AAGCAGCAC----GA--C-----G-AAAA------------AAAAAATGGCAAACACAAG--CGCACAAATACAACA---AATGTAGGTACCAGAGTG----GAAACAACAA---CAA------------------------------------------CAACAACAACAAT-A-GTA--GTA-----GTA--------GTAG--GGTC-AACTAGAAAATTCAATAATCGGACGGACGCCTT-GGTTGATTTTATTCTTCTTCCCTCG-AAAGGTTAGTTTTTC-------G--AG---------AGC----------GAAAAGCTATTATGAAAT--GTGAGAGGACTTGA--G-GCAGT---------------------------------------------------AT--GA---CAGTGTTTTATAATTT-------------------TCCCCTCTCCCT----------CACCCCC------ACGCGCCCGCTCA-----------------------------GCTGCGCCCACGCAAGA--------------------GTG-----------------TGTGTTTTA--ATTTTTGACCTCCCCCA-----------------CGGCATCCACA------AC-------C-CCCG-----TC--------CCGTCTTAT
dp5 4_group1:3606414-3606756 - AAGCAGCAC----A---CGGT--G-----------------AAAAAATGGCAAACACAAT--CACACAGCTACAACA--AAATGTAGGTATCAGA----ACT-----AGCAA---------------------------------------------------CAAC---AAT--------GCCAAAACAT-A-------GCAT--GGACAAAATTGAAAATTCAATAATTTGATG---GCCTAAGG---------------------TGTAAAGGTTAATTT--CG------T--AG---------TAC-----G----GAATGGCTATTATGAAATTCGTGAGAGAATGAA--AAC---------------------------------------AAAGTGTAGTGT-AATGAT--GACCGCAGTGCTTCATAACGGG-AGTT---------------------CAAA----------ATCACA-----AT--A--CACGCACA-----------------------------GCTGCGCCCACGCAACATTGTT------------GGTGTG-----------------TGTGTGATA--ATTTTTGACCTCCCCCA------------C---GCAGCATCCCCA-------C--CCGA-CCCCCA-----CC--------CG----TTC
droPer2 scaffold_5:1606927-1607269 + AAGCAGCAC----A---CGGT--G-----------------AAAAAATGGCAAACACAAT--CACACAGCTACAACA--AAATGTAGGTATCAGA----ACT-----AGCAA---------------------------------------------------CAAC---AAT--------GCCAAAACAT-A-------GCAT--GGACAAAATTGAAAATTCAATAATTTGATG---GCCTAAGG---------------------TGTAAAGGTTAATTT--CG------T--AG---------TAC-----G----GAATGGCTATTATGAAATTCGTGAGAGAATGAA--AAC---------------------------------------AAAGTGTAGTGT-AATGAT--GACCGCAGTGCTTCATAACGGG-AGTT---------------------CAAA----------ATCACA-----AT--A--CACGCACA-----------------------------GCTGCGCCCACGCAACATTGTT------------GGTGTG-----------------TGTGTGATA--ATTTTTGACCTCCCCCA------------C---GCAGCATCCCCA-------C--CCGA-CCCCCA-----CC--------CG----TTC
droWil2 scf2_1100000004521:5110077-5110436 + ------CGC----TG--A-----GGA-AA------------AAAAAATGGCAAAA---------------------A---AATGTAGGTAGCAG------CC-----AACAACAACAACAACGATAACTACAAATTAAATGTTGTTGTATGACCAAAACAG----------------------------AA-AGCAAAGAG--T--GCAAAGAAAGGAAAATTCAATAATTTGATGG-CTCTTT-CG-TGA-----------------TTTAAAGGTTAAGCGAAAC------A--AAAATGATATAA---A---A--GT--A-AAATATTATGAAATT-GTGATGGAATAAATGAAAAAAGTGCT----------------------T-----------------------------GA---CAGTGTTTTGTAACT----------------------------TTCA----------CACACACACTCAT--A--CATACACA-----------------------------GCTGCGCCTACGCAACATTCTA------------C---------------------------AGTT--ACTTCTGACCTCCCCCACACA---CACACAGCATCAGCATTTCCC------CC---CAGCCTTACG-----CA--------TC----ATC
droVir3 scaffold_12723:2874163-2874561 - AACCAGCCA---CAACACATCGAA-A-AA------------ATAAAATGGCAAACACATG--C--ACAACTACAACA---AATGTAGGTATTAT------CC-----AGCTA---------------------------------------------------CAAC---A------------------------------TTG--TGCTGGACATGAAAATTCAATAATTCG-T----GCATT-GT--GATAAC--------TA---GCTTAAGGTTACATTA--C------G--AAAAATAT---AGCAA---A--GT-----AAAATTATGATAT--ATTAG--------------TAACATT--CACACACTTATGAATGAGTGCGCGAGTGCT-------GAGCAAATGAT--GA---CAGTGTTTTATAATCGCGCATTTTTTAGTGGGCGCGCTCCTCGGACAAACACAAACACACACACACGCAG--A--CAGACACG----CATAGGCA--TACGCATAACACATTCCTGCACCCACACA------------------------------------------------GCCC--ATTTTTGACCTCCCCTACGGAG------CA---GCAGCATCCCCC------AT-------TC--CA-----AG--------CT----GTT
droMoj3 scaffold_6500:16140720-16141136 - AAGCAGCCA---CAACACATC--G-A--AATAAAAAAAAATAAAAAATGGCAAACACATG--C--ACAACTACAACA---AATGTAGGTATTGT------CG-----AGCAA---------------------------------------------------CAACAACGATA-----------AA-------------GTTC--TGCTGAAAATGAAAATTCAATAATTCG-T----GGATT-GT------------------------GTGGGTTACATGTTCA-AAAC-A--AA------ACAAGC-----T---TGGA-AAAAATTATGAAAT--ATGAG--------------TAACATT--CA--CGCTGATGAATGAGTGCGCGAGTGCTGAGTGCTGAGCAAATGAT--GA---CAGTGTTTTATAATCGCACATTT-GTAGTGGGCGCGCTCCTCGACCAAACACAAA--CACAC--------------ACACCCAGTGTCATATGAA--TACGCACAATACATTCCTGCGCCCACGCAT------------------------------------------------CCC--ATTTTTGACCTCCCCTACTGAGCATAACCAGCAGCAGCATCCCCC------AT-------TCCAAA-----TC--------CC----AGC
droGri2 scaffold_15126:615328-615710 + AAGCAGCAGCCACAACACATC--C-A--A------------ATAAAATGGCAAACACACATGC--ACAACTACAACA---AAAGTGGGTACCAT------TC---------------------------------------------CATCATCAAAAAACAACAACAACA------------------------------TAC--GG---CAAATGAAAATTCAATAATTCG-C----GCAAT-CA---------------------GTTTAAGGTTAAATTTTCCAAAAC-A--AAAAAAAAACAA---ACGCGCAG-AAA-AAGCATTATGAAAT--ATGAG--------------AAACATT--CA--TGCTGATGAATGAGTGCGCGAGTGTT----GTTCAGCAAAT-----GA---TAGTGTTTTATAATC----------------------------AACC-----A----AACACA-----AC--A--CACACACAG--------GGATTTACGCACACTAGATTCCTGCGCCCACGCAT------------------------------------------------CTC--GTTTTTGACCTCCCCTACGAAT------CA---GCAGCATCCCCC------AT-------CTTGCG-----CCCTTCCCCAAC----TCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGCAGCGC----GG--A-----G-A-AA------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATGTAGGTACCAC------AC-----AGCAA---------------------------------------------------CAACAACAATTA-GAGGGGCT-----AAT--------ATAG--GGCCGAAAATGAAAATTCAATAATTTGAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTCC------A--AG---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGCG----------------------CGC-------------------------CTGT---GTGTGTTTTATAATT----------------------------CCCG----------CACACAC------------ACGCACA-----------------------------GCTGCGCCCCCGCAAATTTGTGTGCGTGAGTGTTCACGTGTGTGTGTG--TG-GGCGAGTGTGTTCATTTTTTTGACCTCCCCCA------------A---ACAGCATCCCCC------GC-------CCACCG-----CC--------CC----ACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................ATTTGAC----GCCTT-GG---------------------CGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
.................................................................................................................................................................................................................................ATAATTTGAC----GCCTT-GG---------------------C........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGTGTTCATTTTT......................................................................................1650.20100000000001000000
droSec2
AAGCAGCGC----GG--A-----G-A-AA------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATGTAGGTACCAC------AC-----AGCAA---------------------------------------------------CAACAACAATTA-GAGGGGCT-----ATT--------ATAG--GGCCGAACATGAAAATTCAATAATTTGAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTCC------A--AG---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGCG----------------------CGC-------------------------CTGT---GTGTGTTTTATAATT----------------------------CCCG----------CACACAC------------ACGCACA-----------------------------GCTGCGCCCCCGCAAATTTGTGTGCGTGAGT-TTCATGTGTG--TGTG--TG-GGCGAGTGTGTTCATTTTTTTGACCTCCCCCA------------A---ACAGCATCCCCC------GC-------CCACCG-----CC--------CC----ACCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................TTA-GAGGGGCT-----ATT--------ATAG--GGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGTGCGTGAGT-TT............................................................................................................................1811.0010010
dm3
AAGCAGCGC----GG--A-----G-A-AA------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATGTAGGTACCAC------AC-----AGCAA---------------------------------------------------CAACAACAATTA-GAGGGGCT-----ATT--------ATAG--GGCCGAAAATGAAAATTCAATAATTTGAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTCC------A--AG---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGCG----------------------CGC-------------------------CTGT---GTGTGTTTTATAATT----------------------------CCCA----------CACACAC------------ACGCACA-----------------------------ACTGCGCCCCCGCAAATTTGTGTGCGTGAGTGTTCATGTGTG--TGTA--TG-GGCGAGTGTGTTCATTTTTTTGACCTCCCCCA------------A---ACAGCATCCCCC------GC-------CCACCG-----CC--------CC----ACCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGTTCATGTGTG--TGTA--AA-.........................................................................................................2319.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000007000000000000000000000000
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................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGTTCATGTGTG--TGTA--TT-.........................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000100
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...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGAGTGTTCATGTGTG--TG................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000021000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------ACGCACA-----------------------------ACTGCGCCCCCGCA................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
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...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTTCATGTGTG--TGTA--TG-G........................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTGCGTGAGTGTTCATG........................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000
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.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGTGTGCGTGAGTG..............................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000200000000000000000000
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.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGTGTGCGTGAGTGTTC...........................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGAGTGTTCATGTGTG--T.................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTGTTCATGTGTG--TGTA--TT-.........................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGTTCATGTGTG--TG................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................................................................................................................ATT--------ATAG--GGCCGAAAATGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................T--GTGAG--------------AAGTGCG----------------------CGC-------------------------CTGT---GTGTGTT.......................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................AGTTTTTCC------A--AG---------AGC-----T--GTGAA-AATT.............................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000
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....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCATGTGTG--TGTA--TG-GGC......................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................A---AATGTAGGTACCAC------AC-----AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGTGCGTGAGTGTTCAT.........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AG--------------AAGTGCG----------------------CGC-------------------------CTGT---GT............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAGCAGCGC----GG--A-----G-A-AA------------AA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGTTCATGTGTG--TGTA--C...........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................CC------A--AG---------AGC-----T--GTGAA-AATTAT...........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................................................................................................................................................................ATTA-GAGGGGCT-----ATT--------ATAG--GGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................GTTTTTCC------A--AG---------AGC-----T--GTGAA-A................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTG--TGTA--TG-GGCGAGT..................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGAGTGTTCATGTGTG--TGTA--TG-G........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GGTTAGTTTTTCC------A--AG---------AGC-----T--G......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGCGTGAGTGTTCATG........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................CT-----ATT--------ATAG--GGCCGAAAATGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCCCC------GC-------CCACCG-----CC--------.........1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CG----------------------CGC-------------------------CTGT---GTGTGTTTTATAAA................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................A-GAGGGGCT-----ATT--------ATAG--GGCCGAAAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TTA-GAGGGGCT-----ATT--------ATAG--GGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCATGTGTG--TGTA--TG-GG.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GAAAATTCAATAATTTGAC----GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------ACGCACA-----------------------------ACTGCGCCCCCG..................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------ACGCACA-----------------------------ACTGCGCCCCCGC.................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGAAAT--GTGAG--------------AAGTGCG----------------------CGC-------------------------.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GAAAT--GTGAG--------------AAGTGCG----------------------CGC-------------------------C....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCGTGAGTGTTCATGTG......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATAATT----------------------------CCCA----------CACACAC------------..................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................AGC-----T--GTGAA-AATTATTATGAA.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
................................................................................AATGTAGGTACCAC------AC-----AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTGTTCATGTGTG--TGTA--C...........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCCCCCA------------A---ACAGCATCCC...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................ATTCAATAATTTGAC----GCCTT-G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--TGTA--TG-GGCGAGTGTGTTC............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-GGCGAGTGTGTTCATTTTT......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGTTCATGTGTG--TGTA--TT-A........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................GGGGCT-----ATT--------ATAG--GGCCGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATGTGTG--TGTA--TG-GGCGAG...................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGTG--TGTA--TG-GGCGAGTG.................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGAGTGTTCATGTGTG--TGTA--TA-.........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCCCCA------------A---ACAGCATCCCC..............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................CAATTA-GAGGGGCT-----ATT--------ATAG--GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGCGTGAGTGTTCATGT.......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTATGAAAT--GTGAG--------------AAGTGCG----------------------C................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCCCCCA------------A---ACAGCATCCCCC------.......................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTTCATGTGTG--TGTA--............................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................CT-----ATT--------ATAG--GGCCGAAAATGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGTGCGTGAGTGTTCA..........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------A---ACAGCATCCCCC------GC-------CCAC..........................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................T-GG---------------------CGCAAAGGTTAGTTTTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................ATTATGAAAT--GTGAG--------------AAGTGC........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................AATTA-GAGGGGCT-----ATT--------ATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTG--TGTA--TG-GGCGAGTGT................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......GC----GG--A-----G-A-AA------------AAAAAATGGCAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAGCAGCGC----GG--A-----G-A-AA------------AAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................ACAACAATTA-GAGGGGCT-----A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGTTCATGTGTG--TGTA--CA-.........................................................................................................2311.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CAACAACAATTA-GAGGGGCT-----A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGTTCATGTGTG--TGTA--TA-AA.......................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTGTGTGCGTGAGTGTT............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTATGAAAT--GTGAG--------------AAGTG.........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................ACAATTA-GAGGGGCT-----ATT--------ATAA--.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................TT-GG---------------------CGCAAAGGTTAGTTTTT........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGTGCGTGAGTGTTCATG........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AT--GTGAG--------------AAGTGCG----------------------CGC-------------------------CTGT---..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................TGAG--------------AAGTGCG----------------------CGC-------------------------CTGT---GTG...........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................AG---------AGC-----T--GTGAA-AATTATTATG.......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TAGTTTTTCC------A--AG---------AGC-----T--GTGA...................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................ATGAAAT--GTGAG--------------AAGTGCG----------------------CG...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AATTATTATGAAAT--GTGAG--------------AAGTG.........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AGGTTAGTTTTTCC------A--AG---------AGC-----T--.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................ATGAAAT--GTGAG--------------AAGTGC........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TG-GGCGAGTGTGTTCATTTT.......................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CAACAACAATTA-GAGGGGCT-----ATT--------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCATGTGTG--TGTA--TG-GGC......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTG--TGTA--TG-GGCGAG...................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGCAAATTTGTGTGCGTG..................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTG--TGTA--TG-GGCGAGTG.................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTTTTTGACCTCCCCCC------------.............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................AGTTTTTCC------A--AG---------AGC-----T--GTGA...................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGAGTGTTCATGTGTG--TG................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG--TGTA--TG-GGCGAGTG.................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................T---GTGTGTTTTATAATT----------------------------CCCG----------T....................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTG--TGTA--TG-GGCGAGTG.................................................................................................1820.5010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAGCAGCGC----GG--A-----G-A--A------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATGTAGGTACCAC------AC-----AGCAA---------------------------------------------------CAA---CAATTA-GAAGGGCT-----ATT--------ATAAGGGGCCGAAAATGAAAATTCAATAATTTGAC----GCCTT-GA---------------------CGCAAAGGTTAGTTTTTCT------A--AG---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGTG----------------------CGC-------------------------CT-----GTGTGTTTTATAATT----------------------------CCCG----------CACAC--------------ACGCACA-----------------------------GCTGCGCCCCCGCAAATTTGTGTGCGTGTG--------TG------T-------GCGAGTGTGTTCA-TTTTTTGACCTCCCCCA------------A---GCAGCATCCCCC---------------CCACCG-----CC--------CC----TCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................G--------------AAGTGTG----------------------CGC-------------------------CT-----GTGTG.........................................................................................................................................................................................................................................................................1811.0010000010
........................................................................................................................................................................................................................................GAC----GCCTT-GA---------------------CGCAAAGGTTAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
............................................................................A---AATGTAGGTACCAC------AC-----AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
droYak3
AAGCAGCGC----GG--A-----G-A--A------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATGTAGGTACCAC------AC-----AGCAA---------------------------------------------------CAA---CAATTA-GAAGGGCT-----ACT--------ATAGGAGGCCCAAAATGAAAATTCAATAATTGAAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTCC------A--AG---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGTT----------------------CGC-------------------------CTGT---GTGTGTTTTATAATT----------------------------CCCG----------CACACAC------------ACGCACA-----------------------------GCTGCGCCCCCGCAAATTTGTGTGCGTGAGTGTTCATGTGTG--TGTGCGTGTGTCGAGTGTGTTC--ATTTTTGACCTCCCCCA------------A---GCAGCATCCCCC------GC-------CCACCG-----CC--------CC----TCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGTTCATGTGTG--TGTGC.............................................................................................................2213.00300210000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------ACGCACA-----------------------------GCTGCGCCCCCGC.................................................................................................................................................2212.00201100000000
......................................................................................................................................................................................................................................TGAAC----GCCTT-GG---------------------CGCAAAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000
............................................................................................................................................................................................................................ATTCAATAATTGAAC----GCCTT-G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.......................G-A--A------------AAAAAATGGCAAACACAAG--C---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
............................................................................................................GCAA---------------------------------------------------CAA---CAATTA-GAAGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGTTCATGTGTG--TGT...............................................................................................................2011.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGTGTTCATGTGTG--TGTG..............................................................................................................2111.00100000100000
...................................................AAACACAAG--C---CAACTACAACA---A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
AAGCAGCGC----GG--A-----G-A--A------------AAAAAATGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
....................................................................................................................................................................................................................................ATTGAAC----GCCTT-GG---------------------CGCAAAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000
...........................................................................................................................................................................ATTA-GAAGGGCT-----ACT--------ATAGGAGGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGTGCGTGAGTGTT............................................................................................................................1911.00100000010000
..............................................................................................................AA---------------------------------------------------CAA---CAATTA-GAAGGGCT-----A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.............................................................................................................................................................................................ACT--------ATAGGAGGCCCAAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEug1
AAGCAGCGC----GA--C-----G-A---------------AAAATATGGCAAACACAAG--C---CAACTACAACAAGAAATGTAGGTACCACC-----AC-----AACAA------------------------------------------------CAACAGCAACATAAA-GAAGGGCC-----ATT--------ATAG--AGCCGAAAATGAAAATTCAATAATTGGAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTGTCC------A--AG---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGCG----------------------TGCGT---------------------ATGTGT---GTATGTTTTATAATT----------------------------CCCG----------CACACAC--TCACACTAG--TGCACA-----------------------------GCTGCGCCCCCGCAAATTCGTGTACGT-------------------------------GTGTGTTCA-TTTTTTGACCTCCCCCA------------A---GCAGCATCCCCC------GT-------CCACCA-----CC--------CC----CACSizeHit CountTotal NormTotal
No Reads
droBia1
AAGCAGCGC----GA--C-----G-G---------------AAAAAATGGCAAACACAAG--CCAGCAACTACAACA---AATGTAGGTAGCAC---------------CAA---------------------------------------------------CAACGACTATTA-GAAGGGCC-----ATTT-------GTAG--GGCCGAAAATGAAAATTCAATAATCGGAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTCCT--GCGG--AA---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGTGCGTTTG------------------CGT-------------------------TTGT---GTGTGTTTTATAATT----------------------------CCCT----------CACACAC------ACCAG--CGCCCA-----------------------------GCTGCGCCCCCGCAAATTTGTGTGCGTATG----CGTGCG-----------------TGTGTGTTC--GTTTTTGACCTCCCCCA------------A---GCAGCATCCCCC-------------------------------------C----ACCSizeHit CountTotal NormTotal
No Reads
droTak1
AAGCAGCGC----GA--C-----G-A--A------------AGAAAATGGCAAACACAAG--CCAGCAGCTACAACA---AATGTAGGTAGCAC---------------CAA---------------------------------------------------CAACAACTGATA-GAAGGGCC-----ATTT-------GTAG--GGCCGAAAATGAAAATTCAATAATTGGAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTGCC-----GTGAA---------AGC-----T--GTGAA-AATTATTATGAAAT--GTGAG--------------AAGAGTG----------------------CGA-------------------------GTGT---GTGTGTTTTATAATT----------------------------CCCT----------CACACAC------ACCAG--CGCACA-----------------------------GCTGCGCCCCCGCAGATGCGTG------------CGTGTG-----------------TGTGTGTTC--GTTTTTGACCTCCCCCA------------A---GCAGCATCCCCC-------------------------------------C----ACCSizeHit CountTotal NormTotal
No Reads
droEle1
AAGCAGCGC----AA--T-----G-A---------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATCTAGGTAC-------------------AA---------------------------------------------------CAACAACAAATA-GAAGGGGC-----AGT--------ATAA--AGCCCAAAATGAAAATTCAATAATTGCAC----GCCTT-GG---------------------CGCAAAGGTTAGTTTTTCCA-----A--AG---------AGC-----T--GTGAA-ATTTATTATGAAAT--GTGAG--------------ACGTGTG----------------------TGT-------------------------GTGT---GTGTGTTTTATAATT----------------------------CCCG----------CACACAG------ACAAG--CGCACA-----------------------------GCTGCGCCCCCGCAAACTTGTA------------CATGTG-----------------TGTGTGACA--ATTTTTGACCTCCCCCA------------A---GCAGCATCCCCC------GC-------CCACTG-----CC--------CC----CACSizeHit CountTotal NormTotal
No Reads
droRho1
AAGCAGCGC----AA--C-----G-----------------AAAAAATGGCAAACACAAG--C---CAATTGCAACA---AATGTAGGTACTAC----------------AA---------------------------------------------------CAACAACA---T-GAAGGGTT-----ATT--------GTAG--AGTCGAAAATGAAAATTCAATAATTGGAC----GCCTT-GA---------------------CGCAAAGGTTAGTTTTTCC------G--AG---------AGC-----T--GTGAA-ATGTATTATGAAAT--GTGAG--------------ATGT-------------------------------------------------------GT---GTGTGTTTTATAATT----------------------------CCCG----------CACACAG------GCAA--ACGCACA-----------------------------GCTGCGCCCCCGCAAATTTGTG------------CTTGTG-----------------TGTGTGACA--ATTTTTGACCTCCCCCA------------A---GCAGCATCCTCC------AT-------CCACCG-----CC--------CC----CACSizeHit CountTotal NormTotal
No Reads
droFic1
AAGCAGCGC----TA--C-----G-----------------AAAAAATGGCAAACACAAG--C---CAACTACAACA---AATGTAGGTACCA------------------A---------------------------------------------------CAACAACAAGAAAGA-AGGCC-----ATA--------ATAG--AGCCGAAAATGAAAATTCAATAATTGGAC----GCCTT-GG---------------------CGCATAGGTTAGTTTTTTCA--CCAA--AG---------AGC-----A--GTAAA-AATTATTATGAAAT--GTGAG--------------AAGTG-------------------------------------------------------T---GTGTGTTTTATAATT----------------------------CCTA----------CACACAT------------ACGCACA-----------------------------GCTGCGCCCCCGCAAATTGGAGCGCGTG--------TGTG-----------------TGCGTGATA--ATTTTTGACCTCCCCCA------------A---GCAGCATCCCCC------TC-------CCAGCG-----CC--------CA----CAGSizeHit CountTotal NormTotal
No Reads
droKik1
AAGCAGCAC----AG--C-----G-ATGG------------AAAAAATGGCAAACACAAG--CGCACAACTACAACA---AATGTAGGTACCACAGGCAACTGAAGCAACAA---------------------------------------------------AAGC---AA-------CGGCC-AAGCAA-AGCAAAGAGTAG--GGCCG-AAATGAAAATTCAATAATTGGAC----GCCTT-GG---------------------CGCTAAGGTTAGTTTTTCC------GA-GA---------AG---------GGGAA-AACTATTATGAAAT--GTGAG--------------AAGTGTG----------------------CGCGA--------------------------A---CAGTGTTTTATAATT----------------------------CCCG----------CACACAC------ACAGG--CGCACA-----------------------------GCTGCGCCCACGCAAGATTGTG-----------------------------------TGTGTGCTC--ATTTTTGACCTCCCCCACGC---------A---CCAGCATCTCCATCCTTCATTCCCAGCC----------CC--------CC----ACCSizeHit CountTotal NormTotal
No Reads
droAna3
AAGCAGCAC----GA--C-----G-A---------------AAAAAATGGCAAATACAAG--CGCACAAATACAACA---AATGTAGGTACCAGAGTA----GAAACGGCAA---------------------------------------------------CAA---CAATGA-AA---GCCA-AGCACT--------GTAG--GGTC-AACTAGAAAATTCAATAATCGGAC----GCCTT-GGCTGATTTT--------TC---CGCAAAGGTTAGTTTT-CC------G--AG---------AGC----------GAAGAGCTATTATGAAAT--GTGAGAGGACCAGC--A-GAAGTGT-----------------------------------------------------GA---CAGTGTTTTATAATT----------------------------C----------------------------------GCTCA-----------------------------GCTGCGCCCACGCAAGATTGTG---------------------------------------TTTAA--ATTTTTGACCTCCCCCA------------C---G---CATCCGCC------AC-------CC--CGCCTGGTC--------CC----ATCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................GGCAAATACAAG--CGCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
..........................................................................................................................................................................................................................AAATTCAATAATCGGAC----GCCTT-................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.............................................AATGGCAAATACAAG--CGCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------------GCTCA-----------------------------GCTGCGCCCACGCAT...............................................................................................................................................2111.001100000
............................................................................................................................................................................................................................ATTCAATAATCGGAC----GCCTT-GGCTGATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
droBip1
AAGCAGCAC----GA--C-----G-AAAA------------AAAAAATGGCAAACACAAG--CGCACAAATACAACA---AATGTAGGTACCAGAGTG----GAAACAACAA---CAA------------------------------------------CAACAACAACAAT-A-GTA--GTA-----GTA--------GTAG--GGTC-AACTAGAAAATTCAATAATCGGACGGACGCCTT-GGTTGATTTTATTCTTCTTCCCTCG-AAAGGTTAGTTTTTC-------G--AG---------AGC----------GAAAAGCTATTATGAAAT--GTGAGAGGACTTGA--G-GCAGT---------------------------------------------------AT--GA---CAGTGTTTTATAATTT-------------------TCCCCTCTCCCT----------CACCCCC------ACGCGCCCGCTCA-----------------------------GCTGCGCCCACGCAAGA--------------------GTG-----------------TGTGTTTTA--ATTTTTGACCTCCCCCA-----------------CGGCATCCACA------AC-------C-CCCG-----TC--------CCGTCTTATSizeHit CountTotal NormTotal
No Reads
dp5
AAGCAGCAC----A---CGGT--G-----------------AAAAAATGGCAAACACAAT--CACACAGCTACAACA--AAATGTAGGTATCAGA----ACT-----AGCAA---------------------------------------------------CAAC---AAT--------GCCAAAACAT-A-------GCAT--GGACAAAATTGAAAATTCAATAATTTGATG---GCCTAAGG---------------------TGTAAAGGTTAATTT--CG------T--AG---------TAC-----G----GAATGGCTATTATGAAATTCGTGAGAGAATGAA--AAC---------------------------------------AAAGTGTAGTGT-AATGAT--GACCGCAGTGCTTCATAACGGG-AGTT---------------------CAAA----------ATCACA-----AT--A--CACGCACA-----------------------------GCTGCGCCCACGCAACATTGTT------------GGTGTG-----------------TGTGTGATA--ATTTTTGACCTCCCCCA------------C---GCAGCATCCCCA-------C--CCGA-CCCCCA-----CC--------CG----TTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................A----ACT-----AGCAA---------------------------------------------------CAAC---AAT--------GCCAAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000000
..................GGT--G-----------------AAAAAATGGCAAACACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................AATGAA--AAC---------------------------------------AAAGTGTAGTGT-...........................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................ATTTGATG---GCCTAAGG---------------------TG.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--CACGCACA-----------------------------GCTGCGCCCAC...................................................................................................................................................2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................GAGAGAATGAA--AAC---------------------------------------AAAGTGT.................................................................................................................................................................................................................................................................................................2111.0010000001000
.....................................................................................AGGTATCAGA----ACT-----AGCAA---------------------------------------------------CAAC---AAT--------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.............................................AATGGCAAACACAAT--CACACAGCTACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
droPer2
AAGCAGCAC----A---CGGT--G-----------------AAAAAATGGCAAACACAAT--CACACAGCTACAACA--AAATGTAGGTATCAGA----ACT-----AGCAA---------------------------------------------------CAAC---AAT--------GCCAAAACAT-A-------GCAT--GGACAAAATTGAAAATTCAATAATTTGATG---GCCTAAGG---------------------TGTAAAGGTTAATTT--CG------T--AG---------TAC-----G----GAATGGCTATTATGAAATTCGTGAGAGAATGAA--AAC---------------------------------------AAAGTGTAGTGT-AATGAT--GACCGCAGTGCTTCATAACGGG-AGTT---------------------CAAA----------ATCACA-----AT--A--CACGCACA-----------------------------GCTGCGCCCACGCAACATTGTT------------GGTGTG-----------------TGTGTGATA--ATTTTTGACCTCCCCCA------------C---GCAGCATCCCCA-------C--CCGA-CCCCCA-----CC--------CG----TTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------AAAGTGTAGTGT-AATGAT--...................................................................................................................................................................................................................................................................................1911.001000001
droWil2
------CGC----TG--A-----GGA-AA------------AAAAAATGGCAAAA---------------------A---AATGTAGGTAGCAG------CC-----AACAACAACAACAACGATAACTACAAATTAAATGTTGTTGTATGACCAAAACAG----------------------------AA-AGCAAAGAG--T--GCAAAGAAAGGAAAATTCAATAATTTGATGG-CTCTTT-CG-TGA-----------------TTTAAAGGTTAAGCGAAAC------A--AAAATGATATAA---A---A--GT--A-AAATATTATGAAATT-GTGATGGAATAAATGAAAAAAGTGCT----------------------T-----------------------------GA---CAGTGTTTTGTAACT----------------------------TTCA----------CACACACACTCAT--A--CATACACA-----------------------------GCTGCGCCTACGCAACATTCTA------------C---------------------------AGTT--ACTTCTGACCTCCCCCACACA---CACACAGCATCAGCATTTCCC------CC---CAGCCTTACG-----CA--------TC----ATCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................ATAATTTGATGG-CTCTTT-CG-T............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
............................................................................................................................................................AACAG----------------------------AA-AGCAAAGAG--T--G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
....................................................................................................................................AATTAAATGTTGTTGTATGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
................................................................................................................................................................................................................................AATAATTTGATGG-CTCTTT-CG-T............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...........................................................................................................AACAACAACAACAACGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
droVir3
AACCAGCCA---CAACACATCGAA-A-AA------------ATAAAATGGCAAACACATG--C--ACAACTACAACA---AATGTAGGTATTAT------CC-----AGCTA---------------------------------------------------CAAC---A------------------------------TTG--TGCTGGACATGAAAATTCAATAATTCG-T----GCATT-GT--GATAAC--------TA---GCTTAAGGTTACATTA--C------G--AAAAATAT---AGCAA---A--GT-----AAAATTATGATAT--ATTAG--------------TAACATT--CACACACTTATGAATGAGTGCGCGAGTGCT-------GAGCAAATGAT--GA---CAGTGTTTTATAATCGCGCATTTTTTAGTGGGCGCGCTCCTCGGACAAACACAAACACACACACACGCAG--A--CAGACACG----CATAGGCA--TACGCATAACACATTCCTGCACCCACACA------------------------------------------------GCCC--ATTTTTGACCTCCCCTACGGAG------CA---GCAGCATCCCCC------AT-------TC--CA-----AG--------CT----GTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................A------------ATAAAATGGCAAACACAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGGAG------CA---GCAGCATCCCC..............................................2111.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCGCTCCTCGGACAAACAA..........................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................A---------------------------------------------------CAAC---A------------------------------TTG--TGCTGGACATGAAAATTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................ATAATTCG-T----GCATT-GT--GATAAC--------TA---G........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GAGTGCGCGAGTGCT-------GAGC............................................................................................................................................................................................................................................................................................1911.001000000001000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CTTATGAATGAGTGCGCGAGT..........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................GT--GATAAC--------TA---GCTTAAGGTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.........................................ATAAAATGGCAAACACATG--C--AC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AAGCAGCCA---CAACACATC--G-A--AATAAAAAAAAATAAAAAATGGCAAACACATG--C--ACAACTACAACA---AATGTAGGTATTGT------CG-----AGCAA---------------------------------------------------CAACAACGATA-----------AA-------------GTTC--TGCTGAAAATGAAAATTCAATAATTCG-T----GGATT-GT------------------------GTGGGTTACATGTTCA-AAAC-A--AA------ACAAGC-----T---TGGA-AAAAATTATGAAAT--ATGAG--------------TAACATT--CA--CGCTGATGAATGAGTGCGCGAGTGCTGAGTGCTGAGCAAATGAT--GA---CAGTGTTTTATAATCGCACATTT-GTAGTGGGCGCGCTCCTCGACCAAACACAAA--CACAC--------------ACACCCAGTGTCATATGAA--TACGCACAATACATTCCTGCGCCCACGCAT------------------------------------------------CCC--ATTTTTGACCTCCCCTACTGAGCATAACCAGCAGCAGCATCCCCC------AT-------TCCAAA-----TC--------CC----AGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................ACAACTACAACA---AATGTAGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..................................................CAAACACATG--C--ACAACTACAACA---A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......................................................................................................................................................................................................................................................................................................................................................................................CTGATGAATGAGTGCGCGAGTGC........................................................................................................................................................................................................................................................................................................2311.001010000
droGri2
AAGCAGCAGCCACAACACATC--C-A--A------------ATAAAATGGCAAACACACATGC--ACAACTACAACA---AAAGTGGGTACCAT------TC---------------------------------------------CATCATCAAAAAACAACAACAACA------------------------------TAC--GG---CAAATGAAAATTCAATAATTCG-C----GCAAT-CA---------------------GTTTAAGGTTAAATTTTCCAAAAC-A--AAAAAAAAACAA---ACGCGCAG-AAA-AAGCATTATGAAAT--ATGAG--------------AAACATT--CA--TGCTGATGAATGAGTGCGCGAGTGTT----GTTCAGCAAAT-----GA---TAGTGTTTTATAATC----------------------------AACC-----A----AACACA-----AC--A--CACACACAG--------GGATTTACGCACACTAGATTCCTGCGCCCACGCAT------------------------------------------------CTC--GTTTTTGACCTCCCCTACGAAT------CA---GCAGCATCCCCC------AT-------CTTGCG-----CCCTTCCCCAAC----TCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:39 AM