ID:

dsi_16529

 Coordinate:

2r:20435897-20436069 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.5 -36.4 -36.4

Flybase annnotation

three_prime_UTR [2r_20435722_20435857_-]; CDS [2r_20435858_20435896_-]; CDS [2r_20436070_20436424_-]; exon [2r_20436070_20436424_-]; exon [2r_20435722_20435896_-]; intron [2r_20435897_20436069_-]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CACTACCTCAGGGTATACAGATGGAGAAGAAGGCTGGCGACACTGCTGTTGTGAGTACTTCTATTTTTAAAATGGAATTTGCAAATTTCGTTTTGTAAATTTGGTTCTTATTATGATGATATCGATAGACGATTAAATCAGTCTGTGTTATCGATAGAAGACTGCGCAGTGCGAAGAATTAAACTATATAGCTAACAAGAATTTCGTATTTTCTCTCTTGCAGGAAACCAACGACGCCGAGGACGAAGGTGGCTTGTGCTAAATTTCTTAATG
**************************************************((((((.((((((((.....(((.(((((((((((......))))))))))).)))........((((((((....(((((((...))).))))))))))))))))))))))).)))((((((((...........................)))))))).............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 M023
head
............................................................................................................................................................................................................................GTTGAAACCAACGACGCCGAGGAC............................. 24 3 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................ATAGCTAACAAGAATTTCGTA................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
...........................AGAAGGCTGGCGACACTGCTG................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....ACCTCAGGGTATACAGATGGAGAAGA................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................TTGTAGATCTGGTTCTTTTTATG.............................................................................................................................................................. 23 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.................................................TGGGAGTACTTCAATTTTGAAAA......................................................................................................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................ATGGAGAAGAAGGCTGGCGAC........................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................................CGAGGACGAAGGTGGCTTGTG............... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................TGGGAGTACTTCAATTTTGAAA.......................................................................................................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................TGGAGAAGAAGGCTGGCGACACTGC................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
........................AGAAGAAGGCTGGCGACA....................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GAAACCAACGACGCCGAGGACGAA.......................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................................CCGAGGACGAAGGTGGCTTGA................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................ACGCCGAGGACGAAGGTG...................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...............TACAGATGGACAAGAA.................................................................................................................................................................................................................................................. 16 1 6 0.83 5 0 0 0 5 0 0 0 0 0 0 0
...............TACAGATGGACAAGA................................................................................................................................................................................................................................................... 15 1 9 0.78 7 0 0 0 7 0 0 0 0 0 0 0
...........................................................................................................................................................AGAAGTCTGCTCAGTGCG.................................................................................................... 18 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
....................ATCGAAAAGAAGGCTGCCGAC........................................................................................................................................................................................................................................ 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1
..............................................................................TTGCAAATTTCGTTTTGAGAT.............................................................................................................................................................................. 21 3 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................TTTGAACTGGAATTGGCAAAT........................................................................................................................................................................................... 21 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTCTTGTTATGATGA.......................................................................................................................................................... 15 1 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0
................ACAGATGGACAAGAA.................................................................................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

GTGATGGAGTCCCATATGTCTACCTCTTCTTCCGACCGCTGTGACGACAACACTCATGAAGATAAAAATTTTACCTTAAACGTTTAAAGCAAAACATTTAAACCAAGAATAATACTACTATAGCTATCTGCTAATTTAGTCAGACACAATAGCTATCTTCTGACGCGTCACGCTTCTTAATTTGATATATCGATTGTTCTTAAAGCATAAAAGAGAGAACGTCCTTTGGTTGCTGCGGCTCCTGCTTCCACCGAACACGATTTAAAGAATTAC
**************************************************((((((.((((((((.....(((.(((((((((((......))))))))))).)))........((((((((....(((((((...))).))))))))))))))))))))))).)))((((((((...........................)))))))).............************************************************** 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 M023
head
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
...................................................................................................................................TAATTTAGTCAGACACAATAGCTA...................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
GTGATGGAGTCCCATATGTCT............................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0
...................................CCGCTGTGACGACAACACT........................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................ATCTGCTAATTTAGTCAG.................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................ATCTGCTTATTTAGCCAGA................................................................................................................................. 19 2 2 0.50 1 0 0 0 1 0
...............................................CAACACTCATGAAGAA.................................................................................................................................................................................................................. 16 1 8 0.13 1 0 0 0 1 0
.........................................................................................................................................AGTCAGACAAAATCGC........................................................................................................................ 16 2 20 0.05 1 0 0 0 0 1
...................................................................................................................................................................................................................................CGTGGCTGCGGCTCCTG............................. 17 2 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:20435847-20436119 - dsi_16529 CACTACCTCAGGGTATACAGATGGAGAAGAAGGCTGGCGACACTGCT------G---TTGTGAGTACTTCTATTTTTAAAA-TGGAATTTGCA------AAT----------------------------------------------------------------------------------------------------------------------------------T--TCGTTT------------TGTAAATTTGGTTCTTATTATGATGATAT-CGATAGACGAT-----------------------------------TAAATCAGTCTGTGTTATCGAT----AGAAGACTG--------------------------C-----------GCAGTGCGA----AGAATTAA--ACTATATAGCTAACAAGAATTTCGTATTTT--------CTCTCTTGCAGGAAACCAACGAC------------GCCGAGGACGAAGGTGGCTTGTGCTAAATTTCTTAATG---
droSec2 scaffold_5:188213-188485 - CACTACCTCAGGGTATACAGATGGAGAAGAAGGCTGGCGACACTGCT------G---TTGTGAGTACTTCTATTCTTAAAA-TGGAATTCGCA------AAT----------------------------------------------------------------------------------------------------------------------------------T--TCGTTT------------TGTAAATTTGGCTCTTATTATGATGATAT-CGATAGACGAT-----------------------------------TAAATCTGTCTGTGTTATCGAT----AGAAGACTG--------------------------C-----------GCAGTGCGA----AGAATTTA--ACTATATAGCTAACAAGAATTTCGTATTTT--------CTCTCTTGCAGGAAACCAACGAC------------GCCGAGGACGAAGGTGGCTTGTGCTAAATTTCTTAATG---
dm3 chr2R:19934795-19935077 - CACTACCTCAGGGTATACAGATGGAGAAGAAGGCTGGCGACACTGCT------G---CTGTGAGTATTTTTATTCTAAAAA-TGGAATTTGCA------ATT----------------------------------------------------------------------------------------------------------------------------------T--TTGTTT------------TGTAAATTTGGCTCTTATTATGATGTTAT-CGATAGGCGAT-----------------------------------TGAATCTGCCTTTGTTGTCGAT----AGAAGACT---------------------------------TGGG-A-CAGTGCGA----AGCAGTAA--ACTAAATAGCTAACAAGAATTTCGTATTTTCTCTCTTTCTCTCTCGCAGGAAACCAACGAC------------GCCGAGGACGAAGGTGGCTTGTGCTAAATTTCTTAATG---
droEre2 scaffold_4845:21310238-21310489 - CACTACCTCAGGGTATACAGCTGGAGAAGAAGGCCGGCGACAATGCT------G---TTGTAAGTACAACTATTCTTAAAA-TGCAACCTGCAGCTGTGATT----------------------------------------------------------------------------------------------------------------------------------T--TCGTT-------------------------------TAAGATGTTAT-CGATAGCAGAT-----------------------------------TAAAGTTATATGTGTAATCGAT----AGGAG-------------------------------------------CATTGCGA----GGACC--A--CCTAAAAAGCTAATAAGAATTTCGAATTTT--------CTCTCTTGCAGGAAACCAACGAC------------GCCGAGGACGAAGGTGGCTTGTGCTAAATTTCTTAATA---
droYak3 2R:19913595-19913890 - CACTACCTCAGGGTATACAGCTGGAGAAGAAAGCTGGCGAAAATGCT------G---TTGTGAGTACTACTATCCTTAAAT-TGCAATCTGCAGCTGGGATT----------------------------------------------------------------------------------------------------------------------------------T--TTGTTT------------TGTAAATTTGGCTCTTATTATGATGTTAT-CGATATATTATATGTTATT---------ATATGTTATCCATCGGTTAAAAGCTATATGAGTAATCGAT----AGGAG-------------------------------------------CATTGCTA----GGACC-----CCCAAAAAGCTAACAAGAATTTCGTATTTT--------CTATTTTGCAGGAAACCAACGAC------------GCCGAGGACGAAGGTGGCTTGTGCTAAATTTCTTAATG---
droEug1 scf7180000409464:307797-308086 - CATTACCTCAAGGTATACAGTTGGAGAAGAAACCCGAAGTTAATGCT------GGAGTTGTAAGTACTACTATTGTTA------CACTTTCCATCTTG-GAT----------------------------------------------------------------------------------------------------------------------------------ATTTTATTT------------CG---------------TTGCTAAATATGACAGTGAGATTTTGTTTTAAATTAATAAAATCTGTAAAATAT-----------------------CAAT----AACAC---------------------AAATAGAAAATCAACTGATT-GTATTCCCAGTTAT--AC--A--TTTCAAAAGCTAATAAAA-TTACCCTTCTT--------CCGTTTTTAAGGAAACTATTGAC------------GCCGAGGACGAGGGAGGTTTATGCTAAATTCATTAAAG---
droBia1 scf7180000302143:468028-468269 - CATTACCTCAGGGAATACAGCTGGAGAAGAAAACCAGCGATACTGCT------CCTGTTGTAAGTAGTACTTTTTTACTA--TGGCAAATTCA------A--------------AATA-----------------ATG----TGT---------------------------------------------------------------------------------------T--TCGTTTCCGATAACAAATTCTAAATATCTATCTAGTTCTAAAATTAT-----------------------------------------------------------------CGAT----AAGTG---------------------AAATAAGAAAGCAGCAGAA--------------------------------------------TAAC---TTTT--------TCTTCTTTTAGGAAACCAATGAC------------GCCGAGGACGAAGGGGGTCTATGCTAAATC-ATTAAAG-TT
droTak1 scf7180000415878:1061712-1062070 - CATTACCTCAGGGTATTCAGCTGGAGAAGAAAAGCAGCGAAAATGCT------GGAGTTGTAAGTACTAATAGTTTTTATTATTTTATTTT-------------TTTGTTGCAAATGTAGTTTATTTTTCATTTTAAA----AGTTCCGTTTCCGATAGCAAATGTTTACTTTTATTTTTATTATTTTATTTTTTTTGTTGCAAATGTAGTTTATTTTTCATTTTGAAAGTT---CCGTT----------------------------------------TC-CGATAGCAAA-TGTTTACTTTTAATCAAATTTTCCAAATAT-----------------------CGAT----AAATG--------------------------TAAGAACAGCTGAT-------------------------------TAACTACT----ATT----TTTTC--------CCACATTTTAGGAAACCAATAAC------------GACGAGGACGAAGGAGGTCTCTGCTAAATACATTACAGTTT
droEle1 scf7180000491214:5141573-5141880 + CATTGCCTCAGGGTATTCAAGTGGAGAAGAAAGCCGGCGATAATGCT------GGAATTGTAAGTACTAATATTTTTTAAAATTTACTTTTTA------GCGTAAGTGTTGCAAAAGA-----------------AAG----TGT------------------------------------------------------------------------------------------------------------------TCCAGTTCCGATTACTACATTTG-CGATAGGGTATTGTTGCCT---------GTCTATCAAATATCGGATTCCGG-------------CGAT----AAC-------------------------A--CAAGAATAGCTGAT-T-TATTGTTT--------------ATTAACATGCTGACAAGAGATTC---CTCT--------TCATCTTTTAGGAAACCAATGACAAGGACAATGAAGCCGAAGACGAAGGAGGTTTATGCTAATTTTATTCAAG---
droRho1 scf7180000780203:17567-17863 - CATTGCCCCAGGGCATTCAAGTGGAGAAGAAAGCCGGCGATAATGATAATGCTGGATTTGTAAGTACTATGATTTAAAAAAATTCACTT-TCTGCCTAGATC----------------------------------------------------------------------------------------------------------------------------------CCTCTTTAT------------C-------TTTACCTTACCTTACTTTT-T-TA----------CATTTCA---------ATATTTCAAATAT-----------------------CCA-----------TTAAACAGTTTGTTTTATAA-CT--CAAGAAGAGCTGGC-T-TATTGTTT----A--TT--T--TTTTAAAAGCTAACAAAT---TTG-ATCA---------TCTCCTTTTAGGAAACCAATGAC------AATGAAGCCGAAGACGAAGGAGGCTTATGCTAATTTTATTAACG---
droFic1 scf7180000453858:1672210-1672493 - CATTACCTCAAGGTATACAACTGGAGAAAAAGGCCAGTGATAATACT------GGAATTGTAAGTACTATTTTTTTTGTAAACTCACTT-GTA------AG----GTCTA----ACTT-----------------GTGTATATGTACATA----------------------------------------------------------------------------------T--TTGGTT------------TACACATTTACGCCTCATTCCACTATT-T-CG----------CAATTCA---------AGTTTTTAATTAT-----------------------CGA-----------TTGCACAGAGCGTTTTAAAA-----TAAGA---G--------C-----------------------------ATTAATACTAATTTTTGATTTT---------CTTTATTAAGGAAACTCAAGAT------------GCTGAAGACGAAGGAGGTTTATGCTAATTTTATTACAAATT
droKik1 scf7180000302355:527133-527305 - CGTTACCTCAAGGTATACAAGTGGAGAAAAAACCCAGCGACAGTGTT------GGAAATGTAAGCAAAAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAAAG--------------------------T-----------GCAAAAGCA----AAAACTTACTTTCAACAAACTAAAAAA---------------------CCTTTTTTCAGGAAAACAATGAC------------GCTGAAGACGAAGGAGGATTGTGTTAATTTTATTAAAG---
droAna3 scaffold_13266:14465998-14466161 + CATTACCGAAAGGTCTGCAGGTAGAGAAGAAACCGGGAGATAATGCT------GGAAATGTAAGTATATCAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAG-----------------------------------T-----------AT---CA-----------------------TCCT---AAAAATATTTTAATAT--------ATAATTTATAGGTTACGCATGAT------GCGGAGGAAGAGGATGAAGGAGGATTGTGCTAATTCAATGCAAG---
droBip1 scf7180000396428:370506-370668 - CATTACCGAAAGGTCTGCAGGTAGAGAAGAAACCCGGAGACAGTGCT------GGAAATGTAAGTATTTAAAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACT-----------------------------------T-----------GT---CGTA----AAAGTT-----------------------TGTTTTAATTT--------ATAATACGTAGGTTACACAGGAC------GCTGAGGAAGAGGATGAGGGAGGATTGTGCTAAGTCAATGCAAG---
droPer2 scaffold_2:7822030-7822091 - TTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACACCTAGGCAACCAACGAA------------GACGAGGACGAAGG---AATATGCTAATTTTGTTAAAG---
droWil2 scf2_1100000004513:5050654-5050698 + CATTGCCACAAGGCATTCAGCTGGAAAGCAAATCAGGAAATACTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:11718618-11718680 - CATTACCGAAAGGTCTAGAGGTAGCGAAGAAATCCGTAGCTGCCGAT------G---AGCTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAT------------GCCA-------------------------------------
droMoj3 scaffold_6496:15137744-15137806 + CATTGCCCAAGGGTCTCGAAGTGGAGAAGAAATCTGGTGGCGATAAT------GAAGCGAACAGTACCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:6505229-6505278 + CATTGCCAAAGGCCCTGGAGGTGGAGAAGAAATCGGACGCGAACACA------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG-------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CACTACCTCAGGGTATACAGATGGAGAAGAAGGCTGGCGACACTGCT------G---TTGTGAGTACTTCTATTTTTAAAA-TGGAATTTGCA------AAT----------------------------------------------------------------------------------------------------------------------------------T--TCGTTT------------TGTAAATTTGGTTCTTATTATGATGATAT-CGATAGACGAT-----------------------------------TAAATCAGTCTGTGTTATCGAT----AGAAGACTG--------------------------C-----------GCAGTGCGA----AGAATTAA--ACTATATAGCTAACAAGAATTTCGTATTTT--------CTCTCTTGCAGGAAACCAACGAC------------GCCGAGGACGAAGGTGGCTTGTGCTAAATTTCTTAATG---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTAACAAGAATTTCGTA........................................................................................2112.00200000000000002000
...........................AGAAGGCTGGCGACACTGCT------G---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
....ACCTCAGGGTATACAGATGGAGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
....................ATGGAGAAGAAGGCTGGCGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGACGAAGGTGGCTTGTG..................2111.00100000000000001000
.....................TGGAGAAGAAGGCTGGCGACACTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
........................AGAAGAAGGCTGGCGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACCAACGAC------------GCCGAGGACGAA.............................2411.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGGACGAAGGTGGCTTGA...................2111.00100000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------GCCGAGGACGAAGGTG.........................1811.00100000000001000000
droSec2
CACTACCTCAGGGTATACAGATGGAGAAGAAGGCTGGCGACACTGCT------G---TTGTGAGTACTTCTATTCTTAAAA-TGGAATTCGCA------AAT----------------------------------------------------------------------------------------------------------------------------------T--TCGTTT------------TGTAAATTTGGCTCTTATTATGATGATAT-CGATAGACGAT-----------------------------------TAAATCTGTCTGTGTTATCGAT----AGAAGACTG--------------------------C-----------GCAGTGCGA----AGAATTTA--ACTATATAGCTAACAAGAATTTCGTATTTT--------CTCTCTTGCAGGAAACCAACGAC------------GCCGAGGACGAAGGTGGCTTGTGCTAAATTTCTTAATG---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC------------GCCGAGGACGAAGGTGG........................2011.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC------------GCCGAGGACGAAGGT..........................1811.0010010
..............ATACAGATGGAGAAGAAGGCTGGCGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.........................GAAGAAGGCTGGCGACACTGCT------G---T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
dm3
CACTACCTCAGGGTATACAGATGGAGAAGAAGGCTGGCGACACTGCT------G---CTGTGAGTATTTTTATTCTAAAAA-TGGAATTTGCA------ATT----------------------------------------------------------------------------------------------------------------------------------T--TTGTTT------------TGTAAATTTGGCTCTTATTATGATGTTAT-CGATAGGCGAT-----------------------------------TGAATCTGCCTTTGTTGTCGAT----AGAAGACT---------------------------------TGGG-A-CAGTGCGA----AGCAGTAA--ACTAAATAGCTAACAAGAATTTCGTATTTTCTCTCTTTCTCTCTCGCAGGAAACCAACGAC------------GCCGAGGACGAAGGTGGCTTGTGCTAAATTTCTTAATG---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................CTAAAAA-TGGAATTTGCA------ATT----------------------------------------------------------------------------------------------------------------------------------...................................................................................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAGGGTATACAGATGGAGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000005000
..............ATACAGATGGAGAAGAAGGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000
................................................................................................................................................................................................................................................................................ATGATGTTAT-CGATAGGCGAT-----------------------------------..................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TACAGATGGAGAAGAAGGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
......................GGAGAAGAAGGCTGGCGACACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGAAGGCTGGCGACACTGCT------G---CTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATGGAGAAGAAGGCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................ATGATGTTAT-CGATAGGCGAT-----------------------------------T.................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGGACGAAGGTGGCTTGTG..................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATACAGATGGAGAAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000
CACTACCTCAGGGTATACAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CT------G---CTGTGAGTATTTTTATTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..............ATACAGATGGAGAAGAAGGCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000
..............ATACAGATGGAGAAGAAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................................................................................................TTGTCGAT----AGAAGACT---------------------------------TGGG-A-........................................................................................................................................2112.0020000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCAGGGTATACAGATGGAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTGGCTTGTGCTAAATT...........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CTCAGGGTATACAGATGGAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AT-----------------------------------TGAATCTGCCTTTGTTGTC...............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....ACCTCAGGGTATACAGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGAC------------GCCGAGGACGAAGG...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................T----AGAAGACT---------------------------------TGGG-A-CAGTGCGA----AGCAG.......................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TTGTCGAT----AGAAGACT---------------------------------TGGG-A-C.......................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGAC------------GCCGAGGACGAAGGTGGCTT.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AGATGGAGAAGAAGGCTGGCGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TATTATGATGTTAT-CGATAGG.........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................ATTTGGCTCTTATTATGATGT....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGAC------------GCCGAGGACGAAG............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAC------------GCCGAGGACGAAGGTGGCTTG....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AAGGCTGGCGACACTGCT------G---C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------GCCGAGGACGAAGGTGGCTTGTG..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................AGAAGGCTGGCGACACTGCT------G---CTGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGAC------------GCCGAGGACGAAGGTGGC.......................2511.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGGGTATACAGATGGAGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................CAGATGGAGAAGAAGGCTGGCGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGGACGAAGGTGGCT......................1811.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ACCTCAGGGTATACAGATGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TATACAGATGGAGAAGAAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
CACTACCTCAGGGTATACAGATGGAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GGAGAAGAAGGCTGGCGACAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGACGAAGGTGGCTTGTGC.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................AGATGGAGAAGAAGGCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGGTGGCTTGTGCTAAATT...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACCAACGAC------------GCCGAGGAC................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAACGAC------------GCCGAGGACGA..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------GCCGAGGACGAAGGTGGC.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................ACAGATGGAGAAGAAGGCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TCTGCCTTTGTTGTCGAT----AGAAG...................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGGACGAAGGTGGCT......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..............ATACAGATGGAGAAGAAGGCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTAACAAGAATTTCA..........................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAC------------GCCGAGGACGAAGGTGGCT......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC------------GCCGAGGACGAAGGTGGC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAC------------GCCGAGGACGAAGGTGG........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................GAAGACT---------------------------------TGGG-A-CAGTGCG.................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CCTCAGGGTATACAGATGGAGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.............TATACAGATGGAGAAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................T--TTGTTT------------TGTAAATTTGGA..................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TTGTCGAT----AGAAGACT---------------------------------TGGG-..........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------GCCGAGGACGAAGGTGGCTTGT...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GAGAAGAAGGCTGGCGACACTGCT------G---CT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC------------GCCGAGGACGAAGGTGG........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ACAGATGGAGAAGAAGGCTGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACGAAGGTGGCTTGTGCTAAA.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GATGGAGAAGAAGGCTGGCGACACTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GATGGAGAAGAAGGCTGGCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................CTGCCTTTGTTGTCGAT----AGAAGACT---------------------------------TGGG-A-........................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAC------------GCCGAGGACGAAGGTGGC.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GTATACAGATGGAGAAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........GGGTATACAGATGGAGAAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................AT----AGAAGACT---------------------------------TGGG-A-CAGTGC..................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------GCCGAGGACGAAGGTGGCTTG....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GAGAAGAAGGCTGGCGACACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................T----------------------------------------------------------------------------------------------------------------------------------T--TTGTTT------------TGTAAATTTGGT..................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................................................................................................ATT----------------------------------------------------------------------------------------------------------------------------------T--TTGTTT------------TGTAAATTTGGT..................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACGAAGGTGGCTTGTGC.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................AAGAAGGCTGGCGACACTGCT------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CAGATGGAGAAGAAGGCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................AGAAGACT---------------------------------TGGG-A-CAGTG...................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.......TCAGGGTATACAGATGGAGAAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TACCTCAGGGTATACAGATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........CAGGGTATACAGATGGAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAC------------GCCGAGGACGAAG............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACGAAGGTGGCTTG....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................T--TTGTTT------------TGTAAATTTGGT..................................................................................................................................................................................................................................................................................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................GATGGAGAAGAAGGCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................TT----------------------------------------------------------------------------------------------------------------------------------T--TTGTTT------------TGTAAATTTGGC..................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CACTACCTCAGGGTATACAGCTGGAGAAGAAGGCCGGCGACAATGCT------G---TTGTAAGTACAACTATTCTTAAAA-TGCAACCTGCAGCTGTGATT----------------------------------------------------------------------------------------------------------------------------------T--TCGTT-------------------------------TAAGATGTTAT-CGATAGCAGAT-----------------------------------TAAAGTTATATGTGTAATCGAT----AGGAG-------------------------------------------CATTGCGA----GGACC--A--CCTAAAAAGCTAATAAGAATTTCGAATTTT--------CTCTCTTGCAGGAAACCAACGAC------------GCCGAGGACGAAGGTGGCTTGTGCTAAATTTCTTAATA---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................AGCTGGAGAAGAAGGCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAC------------GCCGAGGACGAAGGT..........................1911.0010001000
..............ATACAGCTGGAGAAGAAGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
droYak3
CACTACCTCAGGGTATACAGCTGGAGAAGAAAGCTGGCGAAAATGCT------G---TTGTGAGTACTACTATCCTTAAAT-TGCAATCTGCAGCTGGGATT----------------------------------------------------------------------------------------------------------------------------------T--TTGTTT------------TGTAAATTTGGCTCTTATTATGATGTTAT-CGATATATTATATGTTATT---------ATATGTTATCCATCGGTTAAAAGCTATATGAGTAATCGAT----AGGAG-------------------------------------------CATTGCTA----GGACC-----CCCAAAAAGCTAACAAGAATTTCGTATTTT--------CTATTTTGCAGGAAACCAACGAC------------GCCGAGGACGAAGGTGGCTTGTGCTAAATTTCTTAATG---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............ATACAGCTGGAGAAGAAAGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000
droEug1
CATTACCTCAAGGTATACAGTTGGAGAAGAAACCCGAAGTTAATGCT------GGAGTTGTAAGTACTACTATTGTTA------CACTTTCCATCTTG-GAT----------------------------------------------------------------------------------------------------------------------------------ATTTTATTT------------CG---------------TTGCTAAATATGACAGTGAGATTTTGTTTTAAATTAATAAAATCTGTAAAATAT-----------------------CAAT----AACAC---------------------AAATAGAAAATCAACTGATT-GTATTCCCAGTTAT--AC--A--TTTCAAAAGCTAATAAAA-TTACCCTTCTT--------CCGTTTTTAAGGAAACTATTGAC------------GCCGAGGACGAGGGAGGTTTATGCTAAATTCATTAAAG---SizeHit CountTotal NormTotal
No Reads
droBia1
CATTACCTCAGGGAATACAGCTGGAGAAGAAAACCAGCGATACTGCT------CCTGTTGTAAGTAGTACTTTTTTACTA--TGGCAAATTCA------A--------------AATA-----------------ATG----TGT---------------------------------------------------------------------------------------T--TCGTTTCCGATAACAAATTCTAAATATCTATCTAGTTCTAAAATTAT-----------------------------------------------------------------CGAT----AAGTG---------------------AAATAAGAAAGCAGCAGAA--------------------------------------------TAAC---TTTT--------TCTTCTTTTAGGAAACCAATGAC------------GCCGAGGACGAAGGGGGTCTATGCTAAATC-ATTAAAG-TTSizeHit CountTotal NormTotal
No Reads
droTak1
CATTACCTCAGGGTATTCAGCTGGAGAAGAAAAGCAGCGAAAATGCT------GGAGTTGTAAGTACTAATAGTTTTTATTATTTTATTTT-------------TTTGTTGCAAATGTAGTTTATTTTTCATTTTAAA----AGTTCCGTTTCCGATAGCAAATGTTTACTTTTATTTTTATTATTTTATTTTTTTTGTTGCAAATGTAGTTTATTTTTCATTTTGAAAGTT---CCGTT----------------------------------------TC-CGATAGCAAA-TGTTTACTTTTAATCAAATTTTCCAAATAT-----------------------CGAT----AAATG--------------------------TAAGAACAGCTGAT-------------------------------TAACTACT----ATT----TTTTC--------CCACATTTTAGGAAACCAATAAC------------GACGAGGACGAAGGAGGTCTCTGCTAAATACATTACAGTTTSizeHit CountTotal NormTotal
No Reads
droEle1
CATTGCCTCAGGGTATTCAAGTGGAGAAGAAAGCCGGCGATAATGCT------GGAATTGTAAGTACTAATATTTTTTAAAATTTACTTTTTA------GCGTAAGTGTTGCAAAAGA-----------------AAG----TGT------------------------------------------------------------------------------------------------------------------TCCAGTTCCGATTACTACATTTG-CGATAGGGTATTGTTGCCT---------GTCTATCAAATATCGGATTCCGG-------------CGAT----AAC-------------------------A--CAAGAATAGCTGAT-T-TATTGTTT--------------ATTAACATGCTGACAAGAGATTC---CTCT--------TCATCTTTTAGGAAACCAATGACAAGGACAATGAAGCCGAAGACGAAGGAGGTTTATGCTAATTTTATTCAAG---SizeHit CountTotal NormTotal
No Reads
droRho1
CATTGCCCCAGGGCATTCAAGTGGAGAAGAAAGCCGGCGATAATGATAATGCTGGATTTGTAAGTACTATGATTTAAAAAAATTCACTT-TCTGCCTAGATC----------------------------------------------------------------------------------------------------------------------------------CCTCTTTAT------------C-------TTTACCTTACCTTACTTTT-T-TA----------CATTTCA---------ATATTTCAAATAT-----------------------CCA-----------TTAAACAGTTTGTTTTATAA-CT--CAAGAAGAGCTGGC-T-TATTGTTT----A--TT--T--TTTTAAAAGCTAACAAAT---TTG-ATCA---------TCTCCTTTTAGGAAACCAATGAC------AATGAAGCCGAAGACGAAGGAGGCTTATGCTAATTTTATTAACG---SizeHit CountTotal NormTotal
No Reads
droFic1
CATTACCTCAAGGTATACAACTGGAGAAAAAGGCCAGTGATAATACT------GGAATTGTAAGTACTATTTTTTTTGTAAACTCACTT-GTA------AG----GTCTA----ACTT-----------------GTGTATATGTACATA----------------------------------------------------------------------------------T--TTGGTT------------TACACATTTACGCCTCATTCCACTATT-T-CG----------CAATTCA---------AGTTTTTAATTAT-----------------------CGA-----------TTGCACAGAGCGTTTTAAAA-----TAAGA---G--------C-----------------------------ATTAATACTAATTTTTGATTTT---------CTTTATTAAGGAAACTCAAGAT------------GCTGAAGACGAAGGAGGTTTATGCTAATTTTATTACAAATTSizeHit CountTotal NormTotal
No Reads
droKik1
CGTTACCTCAAGGTATACAAGTGGAGAAAAAACCCAGCGACAGTGTT------GGAAATGTAAGCAAAAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAAAG--------------------------T-----------GCAAAAGCA----AAAACTTACTTTCAACAAACTAAAAAA---------------------CCTTTTTTCAGGAAAACAATGAC------------GCTGAAGACGAAGGAGGATTGTGTTAATTTTATTAAAG---SizeHit CountTotal NormTotal
No Reads
droAna3
CATTACCGAAAGGTCTGCAGGTAGAGAAGAAACCGGGAGATAATGCT------GGAAATGTAAGTATATCAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAG-----------------------------------T-----------AT---CA-----------------------TCCT---AAAAATATTTTAATAT--------ATAATTTATAGGTTACGCATGAT------GCGGAGGAAGAGGATGAAGGAGGATTGTGCTAATTCAATGCAAG---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATTGTGCTAATTCAATGC......2211.001010000
............................GAAACCGGGAGATAATGCT------GG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................AGAGAAGAAACCGGGAGATAATGCT------GG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAT------GCGGAGGAAGAGGATGAAGGA..........................2611.001100000
droBip1
CATTACCGAAAGGTCTGCAGGTAGAGAAGAAACCCGGAGACAGTGCT------GGAAATGTAAGTATTTAAAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACT-----------------------------------T-----------GT---CGTA----AAAGTT-----------------------TGTTTTAATTT--------ATAATACGTAGGTTACACAGGAC------GCTGAGGAAGAGGATGAGGGAGGATTGTGCTAAGTCAATGCAAG---SizeHit CountTotal NormTotal
No Reads
droPer2
TTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACACCTAGGCAACCAACGAA------------GACGAGGACGAAGG---AATATGCTAATTTTGTTAAAG---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGGACGAAGG---AATATGCTA...............2311.001001000
droWil2
CATTGCCACAAGGCATTCAGCTGGAAAGCAAATCAGGAAATACTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............ATTCAGCTGGAAAGCAAATCAGGAAATAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
.............CATTCAGCTGGAAAGCAAATCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
droVir3
CATTACCGAAAGGTCTAGAGGTAGCGAAGAAATCCGTAGCTGCCGAT------G---AGCTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAT------------GCCA-------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................AGCGAAGAAATCCGTAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
............GTCTAGAGGTAGCGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000010000000000000000000000000000
..............................AATCCGTAGCTGCCGAT------G---AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
droMoj3
CATTGCCCAAGGGTCTCGAAGTGGAGAAGAAATCTGGTGGCGATAAT------GAAGCGAACAGTACCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................ATAAT------GAAGCGAACAGTACCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111.001100000
droGri2
CATTGCCAAAGGCCCTGGAGGTGGAGAAGAAATCGGACGCGAACACA------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG-------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......AAAGGCCCTGGAGGTGGAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101

Generated: 05/18/2015 at 09:01 PM