ID:

dsi_16482

 Coordinate:

3l:9212129-9212322 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-40.3 -40.2 -40.2

Flybase annnotation

exon [3l_9212323_9212373_+]; CDS [3l_9212323_9212373_+]; exon [3l_9211993_9212128_+]; CDS [3l_9211993_9212128_+]; intron [3l_9212129_9212322_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AACCGCAGCAGGCTCAGCGCTCAGCCGGCGAACCGCCGGTGGTAAGTAAAGTGAGTAACTAGCCGCCGGACAGCCGGTCTAACTAATGGCGTTCGATTTGTTCCCTTACCTTTTTGACCTCGTTTTCGCCATTGATTTACACTTTGTGTCTAAATTTGAAAATATGTTTTGGTTCTTTTTTGTTCTATGCAAATTGCGTTTGGTTTTCGTTTCGTTTTGTTGTTCGGTTGGCGCCCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
**************************************************(((.((.....((((((((((((((((...((((((..((((..(((((((..............((((..(((((((.....((((((.((.....)).))))))))))))).......))))..............)))))))))))))))))......)))....))))))))).))))....)).)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 M024
male body		 M025
embryo
 O001
Testis
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
....................................................GAGTAGGTCGCCGCCGGACA.............................................................................................................................................................................................................................. 20 3 8 3.00 24 0 6 6 6 0 0 0 0 0 0 6
........................................................................................................................................................................................................................TTGTTGTTCGGTTGGCGCCC.......................................................... 20 0 1 2.00 2 0 0 0 0 0 0 0 2 0 0 0
.....................................................AGTAGGTCGCCGCCGGACA.............................................................................................................................................................................................................................. 19 3 13 1.69 22 0 6 6 7 0 0 0 0 0 0 3
.....................................................................................................................................................................................................................GTTTTGTTGTTCGGTTGGCGC............................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................ATGAGATCGACGAGATGGAGG................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................CAGTCGACGAAAGAGAATGAGAT.............................. 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................AATGAGATCGACGAGATGGAGGCGT............. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................AAGAGAATGAGATCGACGAG....................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGCA.... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
.ACCGCAGCAGGCTCAGCGCTC................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
...........GCTCAGCGCTCAGCCGGC......................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................TTTTGTTGTTCGGTTGGCG............................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTTTGTTGTTCGGTTGGCGC............................................................ 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...............................................AAAGTGAGTAACTAGCCGCCGGAC............................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.............................GAACCGCCGGTGATA.......................................................................................................................................................................................................................................................... 15 1 4 1.00 4 0 4 0 0 0 0 0 0 0 0 0
.............................GAACCGCCGGTGATAA......................................................................................................................................................................................................................................................... 16 1 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................ATCGACGAGATGGAGGCGTGG........... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ACTACGTTTGGTTTTCATTTCGT............................................................................... 23 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................................................................................AAATAGAATGAGGTCGAC.......................... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................................................AAAATGAGATCGACGATA...................... 18 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................TTTACACTTTGTGTTTAACTTTAAAA..................................................................................................................................... 26 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
..............................AACCGCCGGTGATAA......................................................................................................................................................................................................................................................... 15 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................ACAGGCGACGAAAGA....................................... 15 1 19 0.11 2 0 0 0 0 0 0 0 0 2 0 0
........................................................................................................................................................................TTGGTTCTATTTTGTT.............................................................................................................. 16 1 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................ACAGTTGACGAAAGA....................................... 15 1 13 0.08 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................GGAGGCGTTGTTGGG...... 15 1 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................AGAAAGAGATCGGCGAGA...................... 18 2 18 0.06 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................TACCTTTTTGACTTC............................................................................................................................................................................. 15 1 19 0.05 1 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTGGCGTCGTCCGAGTCGCGAGTCGGCCGCTTGGCGGCCACCATTCATTTCACTCATTGATCGGCGGCCTGTCGGCCAGATTGATTACCGCAAGCTAAACAAGGGAATGGAAAAACTGGAGCAAAAGCGGTAACTAAATGTGAAACACAGATTTAAACTTTTATACAAAACCAAGAAAAAACAAGATACGTTTAACGCAAACCAAAAGCAAAGCAAAACAACAAGCCAACCGCGGGTGTGTGTCAGCTGCTTTCTCTTACTCTAGCTGCTCTACCTCCGCACCAACCCGTCGAG
**************************************************(((.((.....((((((((((((((((...((((((..((((..(((((((..............((((..(((((((.....((((((.((.....)).))))))))))))).......))))..............)))))))))))))))))......)))....))))))))).))))....)).)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR902009
testis
 O002
Head
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M053
female body
................................................................................................................................................................................................................................................................TTACTCTAGCTGCTCTACCTC................. 21 0 1 2.00 2 0 2 0 0 0 0 0 0
..................................................................................................................................................................................................................................CAACCGCGGGTGTGTGTCAGC............................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................................TCAGCTGCTTTCTCTTACTC................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................CCAAGAAAAAACAAGATACGT....................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................GGCCAGATTGATTACCGC........................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................CGCGGGGATGTGTCAGCTGT............................................ 20 3 2 0.50 1 0 0 1 0 0 0 0 0
..........................................................................................CAAGGTCAAGAAGGGAATGGA....................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 1 0 0 0
.....................................................................TGTCGGCCAGATTAAC................................................................................................................................................................................................................. 16 2 20 0.20 4 0 0 0 0 0 3 1 0
.....................................................................TGTCGGCCAGATTAA.................................................................................................................................................................................................................. 15 1 7 0.14 1 0 0 0 0 0 1 0 0
...............................TGGCGGACACCGTTCGTTTC................................................................................................................................................................................................................................................... 20 3 12 0.08 1 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................................................................TCAACCTCCGCACCAGCC....... 18 2 18 0.06 1 0 0 0 0 0 0 0 1
.................................................................................................AAGAAGGGAATGGATAA.................................................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:9212079-9212372 + dsi_16482 AACCGCA----GCAG--------------G-----------------------------C-TCAGCGCTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCGGACAGCCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTACCTTT------------------TT-----GA-CCTCGTTTTC-GCCATT---------GATT-----T-A--CAC-TTTGTGTCTA-AATTT-GAAAA----------------TATGTTTTGGT-----TCTT---TT------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droSec2 scaffold_0:1684056-1684348 + AACCGCA----GCAG--------------G-----------------------------C-TCAGCGCTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTG--GCCGCCGGACAGCCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC-CTT------------------TT-----GA-CCTCGTTTTT-GCCATT---------GATT-----T-A--CAC-TTTGTGTCTA-AATTT-GAAAA----------------TATGTTTTGGT-----TCTT---TT------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
dm3 chr3L:9442875-9443167 + AACCGCA----GCAG--------------G-----------------------------C-ACAGCGCTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCGGACAGCCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC-CTT------------------TT-----GA-CCTCGTTTTC-GCCATT---------GATT-----T-A--CAC-TATGTGTCTA-AATTT-GAAAA----------------TATGTTTTGGT-----TCTT---TT------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droEre2 scaffold_4784:9434270-9434559 + AGCCGCA----GCAG--------------G-----------------------------C-ACAGCGTTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCGGGCACCCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC-GTT------------------TT-----GG-CCTCGTTTTC-GCCATT---------GATT-----T-A---AC-TTTGAATTTA-AATTT-GAAAA----------------AATGTTTTGGT-----TCTT-----------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAAATGGAAGCGTGGTTGGGCAGCTC
droYak3 3L:2481233-2481522 - AACCGCA----GCAG--------------G-----------------------------C-ACAGCGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATTA--GCCACCGGGCAGCCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC-GTT------------------TT-----GA-CCTCGTTTTC-GCCATT---------GATT-----T-A--CAC-GTTGTATTTA-AATTT-GAAAA-----------------ATGTTTTGGT-----TCTT-----------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAAGCGTGGTTGGGCAGCTC
droEug1 scf7180000409824:96628-96921 - AGCTACA----GCAA--------------G-----------------------------G-ACAACGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATTA--GCCGCAGGGCAGCCCGTCT-AACTAA--TGGCGTTCAA-----------TTT-GTTCC-CTTAC-TTA------------------TT-----GA-CCTCGTTTTG-GCCGTT---------GATT-----T-A--CACTTTTGTATTTA-AATTT-GAAAA-----------------ATCTTTTGGT-----TCTT-----------TTGTTT---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-A------TGTTGT-----------------------------TCGGT-TGGCGCCGCCCACATACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droBia1 scf7180000302428:8333951-8334250 - AACCGCC----GCAG--------------G-----------------------------G-CCCACGATCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTG--GCCGAAAGGCAGCCCGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCCCCTTAC-TTT------------------TT-----TA-CCTCGTTTTT-GCCATT---------GATT-----T-A--CAC-TTTGTTCTAA-AATTT-GAAAA-----------------ACATTTTGGT-----TCTTCTCCT------TTGTTC---TATGCAAATTGC------GTTTGATT--ATCGTTTC----------------GAT----------TTTCGTT-T------CGT--T-----------------------------TCGGT-TGGCGC---CC-CACATAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droTak1 scf7180000415664:189290-189617 - AACCGCA----GCAG--------------CAGCAGCA---GCAG--------------G-CTCAGCGCTCTGCCGGCGATCCGCCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCAGGCAGCAGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC-TTT------------------TT-----GA-CCTTGTTTCTGGCCATT---------GATT-----TGAAACAC-TTTGAATTTACAATTT-GAAAA-----------------ACATTTTGGT-----TCTT-----------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC----------------GATTCCGTTTCCGTTTCGTT-T------TGTTGT-----------------------------TCGGT-TGGCGCCGCC--CACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droEle1 scf7180000490564:211129-211415 + AACC---------------------------------------------------------ACAGCGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCAGGCAGTCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC--TT------------------TT-----GA-CCTTGTTTTG-GCCATTT--------GATT-----T-A--CAC-TTTGAATTTA-AATTT-GAAAA-----------------ACATTTTGGT-----TCTT-----------TTGTTT---TATGCAAATTGC------GTTTGGTT--TACGTTT---------------------------CCGTTTCGTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGTTC
droRho1 scf7180000780168:75865-76161 - AACCACAAATGGCAG--------------------------------------------C-ACAGCGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCAGGCAGCCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC--TT------------------TT-----GA-CCTCGTTTTG-GCCGTTC--------GATT-----T-A--CAC-TTTAAATTTA-AATCT-GAAAA-----------------ATATTTTGGT-----TCTT-----------TTGTTC---TATGCAAATTGC------GTTTGCTT--TTCGTTT---------------------------CCGTTTCGTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CC--ACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droFic1 scf7180000453807:587003-587298 + AACCGCA----GCAG--------------A-----------------------------C-ACAGCGATCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCATGGCAGCCGGTCT-AACTAA--TCGCGTTCGA-----------TTT-GTTCC-TATAC--TT------------------TT-----GA-CCTCGTTTTT-GCCATTT--------TATT-----C-A--CACCTTTTAACCTA-AAATT-GAAAA-----------AAAC-AACATTTTGGT-----TCTT-----------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTC
droKik1 scf7180000302486:2251228-2251567 - AACAGTC----ACAG--------------CAGCAGCA---G------------------CAGCAGCGCGCAACCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAGCTA--GCCGCCAGACAGCCGGTCT-AACTAA--TGGCGTTCGAATCTGTTTCGTTCC-GTTCC-CTTAC-TGT------------------TT-----GA-CCTTGTTTTCGGCCATT---------GATT-----T-AACCAT-CTTGAATTTA-AAT-T-GAATA-----------------TCGTTTTGGT-----TCTT---ATTCGTTTTGGTTC---TATGCAAATTGC------GTTTGGCT--TTCGTT-C----------------GTT------------TCGTTTTTGGCTT--TGGT-TCGAT---TTGGTTTCTTCTG-------------TGGCGC---CC--ACACAGTCGACGAAAGAGAATGAGATTGACGAGATGGAGGCGTGGTTGGGCAACTC
droAna3 scaffold_13337:3695039-3695346 + AACAGCA----GC--------------------------------------------------AGCGGTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACGA--GCCGCCAG-CATCTGGTCT-AACTAA--TGGCGTTCAA-----------TCC-GTTCC-CTTAC--TT------------------TT-----GA-CCTTTGTTTG-GCTATTT--------G----------G--CAT-TTTGAATTGAAAATTT-AAAATTTTTTCATTTAAA--ACATGT-TTGGT-----TCTT-----------TTGTTC---TATGCAAATTAC------GTTCGATT--TTCGTTT----------------------------------ATT-T------GATTGTTTCGATCGATTGGTTTCTTCTG-------------TGACGC---CC--ACACAGTCGACGAAAGAGAATGAGATCGATGAGATGGAGGCGTGGTTGGGCAGCTC
droBip1 scf7180000395954:95887-96190 + AACAGCA----GCAG-----------------------------------------------CAGCGATCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATGA--GCCGCCAG-CATCTGGTCT-AACTAA--TGGCGTTCAA-----------TCC-GTTCCCCTTAC--TT------------------TT-----GA-CCTTATTTTG-GCTATTTGGCATTATGA--------------------ATCTTA-AATTT-TAT--------ATTTAAA--ACTTG-TTTGGT-----TCTT-----------TTGTTC---TATGCAAATTAC------GTTCGGTT--TTCGTTT----------------------------------ATT-T------GATTGTTTCGATCGATTGGTTTCTTCTG-------------TGACGC---CC--ACACAGTCGACGAAAGAGAATGAGATCGATGAGATGGAGGCGTGGTTGGGCAGCTC
dp5 XR_group8:2334957-2335282 + AGCAACA-------G--------------CCACAGCA---GCAA--------------C-CACTACGGGCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAATTA-CGCCGCCGG-CAAGCGATCT-AACTAA--TGGCGTTCGA-----------TCT-GTTTC-CTTAC--TTTAAATCT-----------TT-----AATCCTCGT-TTG-GCCATT---------CATT-----T-A-------TTGATTACA-AATTTCGAACA----------------TTTGTTTTGTT-----TC-T-----------TGGTTT---TATGCAAATTTT------GTTTGGTTCCTTCGTT-C----------------GTTTCCCC----------TTTTTG---------------------GGTTTCTTCTGTGTTTATTCTGTGTGGCGC-GCC--CAAACAGTCGACGAAAGAGAATGAGATCGATGAAATGGAGGCGTGGTTGGGCAGCTC
droPer2 scaffold_24:720369-720697 - AGCAGCA----ACAG--------------CCACAGCA---GCAA--------------C-CACTACGGGCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAATTA-CGCCGCCGG-CAAGCGATCT-AACTAA--TGGCGTTCGA-----------TCT-GTTTC-CTTAC--TTTAAATCT-----------TT-----AATCCTCGT-TTG-GCCATT---------CATT-----T-A-------TTGATTACA-AATTTCGAACA----------------TTTGTTTTGTT-----TC-T-----------TGGTTT---TATGCAAATTTT------GTTTGGTTCCTTCGTT-C----------------GTTTCCCC----------TTTTTG---------------------GGTTTCTTCTGTGTTTATTCTGTGTGGCGC-GCC--CAAACAGTCGACGAAAGAGAATGAGATCGATGAAATGGAGGCGTGGTTGGGCAGCTC
droWil2 scf2_1100000004511:10100630-10100932 + AACAGCA----ACAA--------------AAACAGAACCCG-----------------C-AAATACGCTCAACCGGCGAT---CCGTCGGTGGTAAGTAAAGTGAGTAATCGAAACCATTGG-AATTTGATCT-AACTAATTTGTTGTTTGA-----------TCT-ATATTTCCTAT--TTAAAAATATTCTCCTTAATTTGGGCTAA-TTTTGGTTTT-TTCGTT---------GATT--------------------TTTA-AATTT-CAA-T------------------------TTT-----TCTT---TT------GTGTTT---CATTTACACTGT------GAT--------------------------------------------------T-T------GGTTCCTTCGAT---TTGATTTGTT--------------T-TGGCAC--------GATAGTCAACAAAAGAGAATGAGATCGATGAAATGGAAGCTTGGTTGGGCACCTC
droVir3 scaffold_13049:8308264-8308575 - dvi_18956 AGCTCCT----GCAG--------------CAGCTTCTCCAG------------------C-GCCACGTGCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATGC-GGCTGCCTGAGAACCTATTTTGACTAATATGGCGCTCTAATA--------TTTGGTTTT-CTTAT-CTT-------------------T---------------------AATT---------GATT--------------------TCTA-AATTT-GCAAT----------------TCTGTTTTTGT-----TTTT-----------ATGTTTTTAACTGCAAAATTCG-----ATTTGGT----TCGTTTTGTTTGGGTTTGTTGTCGTTT------GC-----CTT-TTGTCTT--TTGT-----------------------------TGATG-ACGCGC---CCACAAAAAGTCGACGAAAGAGAATGAGATCGACGAAATGGAGGCGTGGCTGGGCAGCTC
droMoj3 scaffold_6680:11962106-11962412 - AGCCGCA----GCAGCAGCTGTAATACCGCCACAGCAACAGCAA--------------A-CACAACGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATGT-GAACGCCTTAGAACCGATGTAAATTAATATGTCGCTCTAATC--------TTTGTTTGT-C--------------------------------------------TA-ATCCTT---------AATT-----T-A----T-TTCATATTTC-AATTT-GCAAT----------------ACTGT-TTATTTATTTACTT---TT------ATGTTATTGAATGCAAATTAAAATTTGGTTTGTTT--TTGGTTTC----------------------------------------------------------------------------------GA-TGGCGC---CC--ATATAGTCGACGAAAGAGAACGAGATCGACGAAATGGAGGCGTGGCTGGGCAGCTC
droGri2 scaffold_15110:7335918-7336249 - AACCGCAGTCGGCAG---CAGTAGC--AGCAACAGCA---GCAACATCCCCACAACAAC-AACAACGTGCAACCGGCGATCATCCGCCGGTGGTAAGTAAAGTGAGTAATGG-CACCGCCTA-GAACCGATGTAAACTAA--TGGCGCTCTA-----------CCT-ATTTT-TCTAT--ATATAATTTT----------TC-----GA-----------------------------TTTGTTGT-A--------TTTGTTTC-AATTT-GCAAT-----------------TTGTTTGTGT---T-TC-T---TT------TCGTTT---T---------------------GAT----TCGTTT-ATTTGTGGTTGGGTTCGTCT------CTC----TTT-TTGTCTT--CTGT-----------------------------TAATG-TGGCGC---CC-CCCAAAGTCGACGAAAGAGAATGAAATCGACGAGATGGAGGCGTGGCTGGGCAGCTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AACCGCA----GCAG--------------G-----------------------------C-TCAGCGCTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCGGACAGCCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTACCTTT------------------TT-----GA-CCTCGTTTTC-GCCATT---------GATT-----T-A--CAC-TTTGTGTCTA-AATTT-GAAAA----------------TATGTTTTGGT-----TCTT---TT------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................T------TGTTGT-----------------------------TCGGT-TGGCGC---CC..........................................................2012.00200002000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---............................................................2111.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGACGAGATGGAGG................2111.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCGACGAAAGAGAATGAGAT..............................2311.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGATCGACGAGATGGAGGCGT.............2511.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGAATGAGATCGACGAG.......................2011.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGCA....2011.00100000000000100000
.ACCGCA----GCAG--------------G-----------------------------C-TCAGCGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.............................G-----------------------------C-TCAGCGCTCAGCCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TT-T------TGTTGT-----------------------------TCGGT-TGGCG................................................................1911.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................TT-T------TGTTGT-----------------------------TCGGT-TGGCGC---............................................................2011.00101000000000000000
..................................................................................................AAAGTGAGTAACTA--GCCGCCGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACGAGATGGAGGCGTGG...........2111.00100000000000001000
droSec2
AACCGCA----GCAG--------------G-----------------------------C-TCAGCGCTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTG--GCCGCCGGACAGCCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC-CTT------------------TT-----GA-CCTCGTTTTT-GCCATT---------GATT-----T-A--CAC-TTTGTGTCTA-AATTT-GAAAA----------------TATGTTTTGGT-----TCTT---TT------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAGATGGAGGCGTGGTTGGGCA....2611.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGCAGCT.2311.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGAGGCGTGGTTGGG......2011.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGAGATCGACGAGAT.....................1911.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACGAGATGGAGGCGTGG...........2111.0010001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCGACGAAAGAGAATGAGATC.............................2511.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGACGAGATGGA..................1911.0010010
..................................................................GCTCAGCCGGCGAA---CCGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...................................................................................CCGCCGGTGGTAAGTAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
dm3
AACCGCA----GCAG--------------G-----------------------------C-ACAGCGCTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCGGACAGCCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC-CTT------------------TT-----GA-CCTCGTTTTC-GCCATT---------GATT-----T-A--CAC-TATGTGTCTA-AATTT-GAAAA----------------TATGTTTTGGT-----TCTT---TT------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.ACCGCA----GCAG--------------G-----------------------------C-ACAGCGCTCAGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGCA....2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................T------TGTTGT-----------------------------TCGGT-TGGCGC---............................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGACGAGATGGAGGCGTG............2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGAGGCGTGGTTGGG......1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000010000000000
....................................................................................CGCCGGTGGTAAGTAAAGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGAGGCGTGGTTGGG......2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGACGAGATGGAGG................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TT------------------TT-----GA-CCTCGTTTTC-GCCAT........................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................CGCCGGTGGTAAGTAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GAA---CCGCCGGTGGTAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAGAATGAGATCGACG.........................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGCAGC..2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGAGATCGACGAGATGG...................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................GCGAA---CCGCCGGTGGTAAGTAAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GTCTA-AATTT-GAAAA----------------TATGTT................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................AAGTGAGTAACTA--GCCGCCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGACGAGATGGAGGC...............2411.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGAGGCGTGGTTGGGC.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................................................AATTGC------GTTTGGTT--TTCGTT............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGAGATCGACGAGATGGA..................2211.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AA--TGGCGTTCGA-----------TTT-GTTCC-C............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCGACGAAAGAGAATGAGA...............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTTGT-----------------------------TCGGT-TGGCGC---CCAC........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........................................................C-ACAGCGCTCAGCCGGCGAA---C......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGACGAAAGAGAATGAGA...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACACAGTCGACGAAAGAGA.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...........................................................C-ACAGCGCTCAGCCGGCGAA---CCGCCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGAATGAGATCGACGAGATGGA..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................................................................TTGC------GTTTGGTT--TTCGTTTC---------------------------------G........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................A---CCGCCGGTGGTAAGTAAAGTGAGTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................G-----------------------------C-ACAGCGCTCAGCCGGCGAA---CCGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................GTGAGTAACTA--GCCGCCGGACAGCCGG........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................C-CTTAC-CTT------------------TT-----GA-CCTCGTTT................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................GCGAA---CCGCCGGTGGTAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAGATGGAGGCGTGGTTGGG......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGATGGAGGCGTGGTTGGGCAGCT.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................TTCC-CTTAC-CTT------------------TT-----GA-CCTCG...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................T------------------TT-----GA-CCTCGTTTTC-GCCATT---------GATT-----.....................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAAAGAGAATGAGA...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGAATGAGATCGAC..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAAGAGAATGAGATCGAC..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGCAGCTC2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAATGAGATCGACGAGATGGA..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGAGAATGAGATCGACGA........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCGACGAGATGGAGGCGTGGT..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
AACCGCA----GCAG--------------G-----------------------------C-ACAGCGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GTTC---TATGCAAATTGC------GTTTG.......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...................................................................................................................................................................................................................................................................................................................................................................GTT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------...........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGACGAGATGGAC.................2211.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAATGAGATCGACGAG.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................AA---CCGCCGGTGGTAAGTAAAGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGCAG...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGATGGAGGCGTGGTT.........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACGAGATGGAGGCGTGG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGACGAGAT.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTC---------------------------------GTT-T------TGTTGT-----------------------------TCGGT-TGG..................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACGAGATGGAGGCG..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCGTGGTTGGGCAGCT.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................................................................AAATTGC------GTTTGGTT--TTCGTT............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGATGGAGGCGTGGTTGGGG.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CCGCCGGTGGTAAGTAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................T-T------TGTTGT-----------------------------TCGGT-TGGCGC---CC..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCGACGAGATGGAGGC...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------T..........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TC-GCCATT---------GATT-----T-A--CAC-TA..........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CGGTGGTAAGTAAAGTGAGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................ACAGCGCTCAGCCGGCGAA---CCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................T--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------TC.........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................AATTGC------GTTTGGTT--TTCGTTT...........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAGATGGAGGCGTGGTTGGGC.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGAGAATGAGATCGA...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CCGCA----GCAG--------------G-----------------------------C-ACAGCGCTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCGACGAGATGGAGGC...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAGATGGAGGCGTGGT..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGAATGAGATCGACGAGATGG...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TT-GAAAA----------------TATGTTTTGGT-----TCTT---TT------T......................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAGATGGAGGCGTGGTTGGGG.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGT......1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................GTT--TTCGTTTC---------------------------------GTT-T------TGTT..........................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCGTGGTTGGGCAGGGA2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................CGCCGGTGGTAAGTAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGCCGCA----GCAG--------------G-----------------------------C-ACAGCGTTCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCGGGCACCCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC-GTT------------------TT-----GG-CCTCGTTTTC-GCCATT---------GATT-----T-A---AC-TTTGAATTTA-AATTT-GAAAA----------------AATGTTTTGGT-----TCTT-----------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAAATGGAAGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAAGAGAATGAGAT..............................1911.0011000000
......A----GCAG--------------G-----------------------------C-ACAGCGTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAGCGTGGTTGGGCAG...2011.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGACGAAATGGA..................1911.0010000100
...CGCA----GCAG--------------G-----------------------------C-ACAGCGTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...................................................................................CCGCCGGTGGTAAGTAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAATGGAAGCGTGGTTGGGC.....2411.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAATGGAAGCGTGGTTG........2211.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAAGCGTGGTTGGGCA....2011.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAATGGAAGCGTGGTTGG.......2211.0010000010
droYak3
AACCGCA----GCAG--------------G-----------------------------C-ACAGCGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATTA--GCCACCGGGCAGCCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC-GTT------------------TT-----GA-CCTCGTTTTC-GCCATT---------GATT-----T-A--CAC-GTTGTATTTA-AATTT-GAAAA-----------------ATGTTTTGGT-----TCTT-----------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAAGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAGAATGAGAT..............................1516.00600000000006
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAGATGGAAGCGTGGTTGGGC.....2513.00300000030000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGACGAGATGGAAGCGTG............2112.00200000020000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGAATGAGATCGACGAGATGGA..................2512.00200000020000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGATGGAAGCGTGGTTGGGG.....2411.00100010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATGAGATCGACGAGAT.....................2011.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACGAAAGAGAATGAGATC.............................2111.00110000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAAGCGTGGTTGGGCA....2011.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAAGCGTGGTTGGGC.....1911.00100000010000
............................................................................CGAT---CCGCCGGTGGTAAGTAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGACGAGATGGAAGCGT.............2011.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAAGAGAATGAGAT..............................1911.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAGCGTGGTTGGGCA....1911.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTTGT-----------------------------TCGGT-TGGCGC---CCACACAC....................................................2411.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGATGGAAGCGTGGT..........1911.00100000010000
...................................................................................................................................................................TTT-GTTCC-CTTAC-GTT------------------TT-----GA-C.......................................................................................................................................................................................................................................................................................................................2111.00110000000000
.............AG--------------G-----------------------------C-ACAGCGCTCAGCCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGGAAGCGTGGTTGGGCAGCT.2411.00100000010000
.............................................................ACAGCGCTCAGCCGGCGAT---CCGCCGGTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
droEug1
AGCTACA----GCAA--------------G-----------------------------G-ACAACGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATTA--GCCGCAGGGCAGCCCGTCT-AACTAA--TGGCGTTCAA-----------TTT-GTTCC-CTTAC-TTA------------------TT-----GA-CCTCGTTTTG-GCCGTT---------GATT-----T-A--CACTTTTGTATTTA-AATTT-GAAAA-----------------ATCTTTTGGT-----TCTT-----------TTGTTT---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-A------TGTTGT-----------------------------TCGGT-TGGCGCCGCCCACATACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotal
No Reads
droBia1
AACCGCC----GCAG--------------G-----------------------------G-CCCACGATCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTG--GCCGAAAGGCAGCCCGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCCCCTTAC-TTT------------------TT-----TA-CCTCGTTTTT-GCCATT---------GATT-----T-A--CAC-TTTGTTCTAA-AATTT-GAAAA-----------------ACATTTTGGT-----TCTTCTCCT------TTGTTC---TATGCAAATTGC------GTTTGATT--ATCGTTTC----------------GAT----------TTTCGTT-T------CGT--T-----------------------------TCGGT-TGGCGC---CC-CACATAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotal
No Reads
droTak1
AACCGCA----GCAG--------------CAGCAGCA---GCAG--------------G-CTCAGCGCTCTGCCGGCGATCCGCCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCAGGCAGCAGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC-TTT------------------TT-----GA-CCTTGTTTCTGGCCATT---------GATT-----TGAAACAC-TTTGAATTTACAATTT-GAAAA-----------------ACATTTTGGT-----TCTT-----------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC----------------GATTCCGTTTCCGTTTCGTT-T------TGTTGT-----------------------------TCGGT-TGGCGCCGCC--CACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotal
No Reads
droEle1
AACC---------------------------------------------------------ACAGCGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCAGGCAGTCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC--TT------------------TT-----GA-CCTTGTTTTG-GCCATTT--------GATT-----T-A--CAC-TTTGAATTTA-AATTT-GAAAA-----------------ACATTTTGGT-----TCTT-----------TTGTTT---TATGCAAATTGC------GTTTGGTT--TACGTTT---------------------------CCGTTTCGTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGTTCSizeHit CountTotal NormTotal
No Reads
droRho1
AACCACAAATGGCAG--------------------------------------------C-ACAGCGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCCAGGCAGCCGGTCT-AACTAA--TGGCGTTCGA-----------TTT-GTTCC-CTTAC--TT------------------TT-----GA-CCTCGTTTTG-GCCGTTC--------GATT-----T-A--CAC-TTTAAATTTA-AATCT-GAAAA-----------------ATATTTTGGT-----TCTT-----------TTGTTC---TATGCAAATTGC------GTTTGCTT--TTCGTTT---------------------------CCGTTTCGTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CC--ACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotal
No Reads
droFic1
AACCGCA----GCAG--------------A-----------------------------C-ACAGCGATCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACTA--GCCGCATGGCAGCCGGTCT-AACTAA--TCGCGTTCGA-----------TTT-GTTCC-TATAC--TT------------------TT-----GA-CCTCGTTTTT-GCCATTT--------TATT-----C-A--CACCTTTTAACCTA-AAATT-GAAAA-----------AAAC-AACATTTTGGT-----TCTT-----------TTGTTC---TATGCAAATTGC------GTTTGGTT--TTCGTTTC---------------------------------GTT-T------TGTTGT-----------------------------TCGGT-TGGCGC---CCACACACAGTCGACGAAAGAGAATGAGATCGACGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotal
No Reads
droKik1
AACAGTC----ACAG--------------CAGCAGCA---G------------------CAGCAGCGCGCAACCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAGCTA--GCCGCCAGACAGCCGGTCT-AACTAA--TGGCGTTCGAATCTGTTTCGTTCC-GTTCC-CTTAC-TGT------------------TT-----GA-CCTTGTTTTCGGCCATT---------GATT-----T-AACCAT-CTTGAATTTA-AAT-T-GAATA-----------------TCGTTTTGGT-----TCTT---ATTCGTTTTGGTTC---TATGCAAATTGC------GTTTGGCT--TTCGTT-C----------------GTT------------TCGTTTTTGGCTT--TGGT-TCGAT---TTGGTTTCTTCTG-------------TGGCGC---CC--ACACAGTCGACGAAAGAGAATGAGATTGACGAGATGGAGGCGTGGTTGGGCAACTCSizeHit CountTotal NormTotal
No Reads
droAna3
AACAGCA----GC--------------------------------------------------AGCGGTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAACGA--GCCGCCAG-CATCTGGTCT-AACTAA--TGGCGTTCAA-----------TCC-GTTCC-CTTAC--TT------------------TT-----GA-CCTTTGTTTG-GCTATTT--------G----------G--CAT-TTTGAATTGAAAATTT-AAAATTTTTTCATTTAAA--ACATGT-TTGGT-----TCTT-----------TTGTTC---TATGCAAATTAC------GTTCGATT--TTCGTTT----------------------------------ATT-T------GATTGTTTCGATCGATTGGTTTCTTCTG-------------TGACGC---CC--ACACAGTCGACGAAAGAGAATGAGATCGATGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGAGGCGTGGTTGGGCA....2213.003100011
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGG......1812.002000002
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGATGAGATGGAGGCGT.............2012.002010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGAATGAGATCGATGAGAT.....................2311.001000010
..............................................................................AT---CCGCCGGTGGTAAGTAAATC...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG-------------TGACGC---CC--ACACAGTCGA..............................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGCGTGGTTGGGCAGCTC2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGATGAGATGGAGGCGT.............2411.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGGCGTGGTTGGGC.....1911.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATGAGATCGATGAGATGGAGGC...............2611.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGATGGAGGCGTGGTTGGGC.....2411.001100000
AACAGCA----GC--------------------------------------------------AGCGGTCAGCCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
....GCA----GC--------------------------------------------------AGCGGTCAGCCGGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGAGGCGTGGTTGGGCAGC..2411.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGAGGCGTGGTTGGGCAGCTC2611.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGCGTGGTTGGGCAG...2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGATGAGATGGAGGC...............2211.001000010
......A----GC--------------------------------------------------AGCGGTCAGCCGGCGAT---CCGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGCGTGGTTGGGC.....1811.001100000
............................................................................CGAT---CCGCCGGTGGTAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
AACAGCA----GC--------------------------------------------------AGCGGTCAGCCGGCGAT---CC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCGTGGTTGGGCAG...1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................T------GATTGTTTCGATCGATTGGT..........................................................................................2111.001000010
..CAGCA----GC--------------------------------------------------AGCGGTCAGCCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGATGAGATGGA..................2111.001000010
droBip1
AACAGCA----GCAG-----------------------------------------------CAGCGATCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATGA--GCCGCCAG-CATCTGGTCT-AACTAA--TGGCGTTCAA-----------TCC-GTTCCCCTTAC--TT------------------TT-----GA-CCTTATTTTG-GCTATTTGGCATTATGA--------------------ATCTTA-AATTT-TAT--------ATTTAAA--ACTTG-TTTGGT-----TCTT-----------TTGTTC---TATGCAAATTAC------GTTCGGTT--TTCGTTT----------------------------------ATT-T------GATTGTTTCGATCGATTGGTTTCTTCTG-------------TGACGC---CC--ACACAGTCGACGAAAGAGAATGAGATCGATGAGATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotal
No Reads
dp5
AGCAACA-------G--------------CCACAGCA---GCAA--------------C-CACTACGGGCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAATTA-CGCCGCCGG-CAAGCGATCT-AACTAA--TGGCGTTCGA-----------TCT-GTTTC-CTTAC--TTTAAATCT-----------TT-----AATCCTCGT-TTG-GCCATT---------CATT-----T-A-------TTGATTACA-AATTTCGAACA----------------TTTGTTTTGTT-----TC-T-----------TGGTTT---TATGCAAATTTT------GTTTGGTTCCTTCGTT-C----------------GTTTCCCC----------TTTTTG---------------------GGTTTCTTCTGTGTTTATTCTGTGTGGCGC-GCC--CAAACAGTCGACGAAAGAGAATGAGATCGATGAAATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAGGCGTGGTTGGGCAG...2211.0010100000000
...............................................................TACGGGCAGCCGGCGAA---CCGCCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..................................................................GGGCAGCCGGCGAA---CCGCCGGTGGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGATGAAATGGAGGC...............2211.0010000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGTTTATTCTGTGTGGC.................................................................2011.0010100000000
..........................................AA--------------C-CACTACGGGCAGCCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGATGAAATGGAGGCGTG............2111.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAAATGGAGGCGTGGTTGGGC.....2411.0010100000000
...............................................................TACGGGCAGCCGGCGAA---CCGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.............................................................ACTACGGGCAGCCGGCGAA---CCGCCGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGTCGACGAAAGAGAATG..................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................TGGTTCCTTCGTT-C----------------GTTTCCC...................................................................................................................................2111.0010100000000
droPer2
AGCAGCA----ACAG--------------CCACAGCA---GCAA--------------C-CACTACGGGCAGCCGGCGAA---CCGCCGGTGGTAAGTAAAGTGAGTAATTA-CGCCGCCGG-CAAGCGATCT-AACTAA--TGGCGTTCGA-----------TCT-GTTTC-CTTAC--TTTAAATCT-----------TT-----AATCCTCGT-TTG-GCCATT---------CATT-----T-A-------TTGATTACA-AATTTCGAACA----------------TTTGTTTTGTT-----TC-T-----------TGGTTT---TATGCAAATTTT------GTTTGGTTCCTTCGTT-C----------------GTTTCCCC----------TTTTTG---------------------GGTTTCTTCTGTGTTTATTCTGTGTGGCGC-GCC--CAAACAGTCGACGAAAGAGAATGAGATCGATGAAATGGAGGCGTGGTTGGGCAGCTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGAGGCGTGGTTGGGC.....2011.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAAGAGAATGAGATC.............................1911.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGATGAAATGGA..................1911.001000001
droWil2
AACAGCA----ACAA--------------AAACAGAACCCG-----------------C-AAATACGCTCAACCGGCGAT---CCGTCGGTGGTAAGTAAAGTGAGTAATCGAAACCATTGG-AATTTGATCT-AACTAATTTGTTGTTTGA-----------TCT-ATATTTCCTAT--TTAAAAATATTCTCCTTAATTTGGGCTAA-TTTTGGTTTT-TTCGTT---------GATT--------------------TTTA-AATTT-CAA-T------------------------TTT-----TCTT---TT------GTGTTT---CATTTACACTGT------GAT--------------------------------------------------T-T------GGTTCCTTCGAT---TTGATTTGTT--------------T-TGGCAC--------GATAGTCAACAAAAGAGAATGAGATCGATGAAATGGAAGCTTGGTTGGGCACCTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................CGCTCAACCGGCGAT---CCGTCGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCGATGAAATGGAAGCTTG............2511.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATGAGATCGATGAAATGGAAGC...............2611.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGATGAAATGGAA.................2211.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAAATGGAAGCTTGGTTGGG......2311.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAAAGAGAATGAGA...............................1820.50110000
droVir3
AGCTCCT----GCAG--------------CAGCTTCTCCAG------------------C-GCCACGTGCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATGC-GGCTGCCTGAGAACCTATTTTGACTAATATGGCGCTCTAATA--------TTTGGTTTT-CTTAT-CTT-------------------T---------------------AATT---------GATT--------------------TCTA-AATTT-GCAAT----------------TCTGTTTTTGT-----TTTT-----------ATGTTTTTAACTGCAAAATTCG-----ATTTGGT----TCGTTTTGTTTGGGTTTGTTGTCGTTT------GC-----CTT-TTGTCTT--TTGT-----------------------------TGATG-ACGCGC---CCACAAAAAGTCGACGAAAGAGAATGAGATCGACGAAATGGAGGCGTGGCTGGGCAGCTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................TAACTGCAAAATTCG-----ATTTGGT----TCGTTT...........................................................................................................................................................2811.001000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TTTT-----------ATGTTTTTAACTGCAAAATTCG-----AT..........................................................................................................................................................................2811.001000000000000000000000000000000100000000000000000000000000000000
...................................CTCCAG------------------C-GCCACGTGCAGCCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGATCGACGAAATGGAGGCGT.............2611.001000000000000000000000000000000000000000000100000000000000000000
.............................................................................GAT---CCGCCGGTGGTAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................T------GC-----CTT-TTGTCTT--TTGT-----------------------------TGATG-ACGCGC---............................................................2811.001000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGAGAATGAGATCGACGA........................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TCGTTTTGTTTGGGTTTGTTG............................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGATCGACGAAATGGAGGCGT.............2511.001000000010000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TA-AATTT-GCAAT----------------TCTGTTTTTGT-----T.....................................................................................................................................................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAAGAGAATGAGAT..............................1911.001000000010000000000000000000000000000000000000000000000000000000
droMoj3
AGCCGCA----GCAGCAGCTGTAATACCGCCACAGCAACAGCAA--------------A-CACAACGCTCAGCCGGCGAT---CCGCCGGTGGTAAGTAAAGTGAGTAATGT-GAACGCCTTAGAACCGATGTAAATTAATATGTCGCTCTAATC--------TTTGTTTGT-C--------------------------------------------TA-ATCCTT---------AATT-----T-A----T-TTCATATTTC-AATTT-GCAAT----------------ACTGT-TTATTTATTTACTT---TT------ATGTTATTGAATGCAAATTAAAATTTGGTTTGTTT--TTGGTTTC----------------------------------------------------------------------------------GA-TGGCGC---CC--ATATAGTCGACGAAAGAGAACGAGATCGACGAAATGGAGGCGTGGCTGGGCAGCTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGATCGACGAAATGGA..................2011.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGCGTGGCTGGGCAGC..2011.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGATCGACGAAATGGAGGC...............2411.001000001
....................GTAATACCGCCACAGCAACAGCAA--------------A-CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGATCGACGAAATGGA..................2111.001000001
.............................................................................GAT---CCGCCGGTGGTAAGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..........................................AA--------------A-CACAACGCTCAGCCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGGCTGGGCAGCTC1820.501100000
droGri2
AACCGCAGTCGGCAG---CAGTAGC--AGCAACAGCA---GCAACATCCCCACAACAAC-AACAACGTGCAACCGGCGATCATCCGCCGGTGGTAAGTAAAGTGAGTAATGG-CACCGCCTA-GAACCGATGTAAACTAA--TGGCGCTCTA-----------CCT-ATTTT-TCTAT--ATATAATTTT----------TC-----GA-----------------------------TTTGTTGT-A--------TTTGTTTC-AATTT-GCAAT-----------------TTGTTTGTGT---T-TC-T---TT------TCGTTT---T---------------------GAT----TCGTTT-ATTTGTGGTTGGGTTCGTCT------CTC----TTT-TTGTCTT--CTGT-----------------------------TAATG-TGGCGC---CC-CCCAAAGTCGACGAAAGAGAATGAAATCGACGAGATGGAGGCGTGGCTGGGCAGCTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................ACATCCCCACAACAAC-AACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
...........GCAG---CAGTAGC--AGCAACAGCA---GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23190.05110

Generated: 05/18/2015 at 04:19 PM